HEADER SIGNALING PROTEIN 03-OCT-13 4C9V TITLE XENOPUS RNF43 ECTODOMAIN IN COMPLEX WITH XENOPUS RSPO2 FU1-FU2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNF43; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ECTODOMAIN, RESIDUES 25-204; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: R-SPONDIN-2; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: FU1-FU2, RESIDUES 35-144; COMPND 10 SYNONYM: ROOF PLATE-SPECIFIC SPONDIN-2, RSPO2; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XENOPUS (SILURANA) TROPICALIS; SOURCE 3 ORGANISM_COMMON: WESTERN CLAWED FROG; SOURCE 4 ORGANISM_TAXID: 8364; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293T; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: TRANSIENT; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHLSEC; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: XENOPUS (SILURANA) TROPICALIS; SOURCE 13 ORGANISM_COMMON: WESTERN CLAWED FROG; SOURCE 14 ORGANISM_TAXID: 8364; SOURCE 15 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 16 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM_CELL_LINE: HEK293T; SOURCE 19 EXPRESSION_SYSTEM_VECTOR: TRANSIENT; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PHLSEC KEYWDS SIGNALING PROTEIN, WNT, ZNRF3, RNF43, LGR4, LGR5, LGR6, RSPO, KEYWDS 2 R-SPONDIN, R-SPO, RSPO1, RSPO2, RSPO3, RSPO4, RECEPTOR, MEMBRANE, KEYWDS 3 SIGNALLING EXPDTA X-RAY DIFFRACTION AUTHOR M.ZEBISCH,E.Y.JONES REVDAT 2 27-NOV-13 4C9V 1 JRNL REVDAT 1 20-NOV-13 4C9V 0 JRNL AUTH M.ZEBISCH,Y.XU,C.KRASTEV,B.T.MACDONALD,M.CHEN,R.J.C.GILBERT, JRNL AUTH 2 X.HE,E.Y.JONES JRNL TITL STRUCTURAL AND MOLECULAR BASIS OF ZNRF3/RNF43 TRANSMEMBRANE JRNL TITL 2 UBIQUITIN LIGASE INHIBITION BY THE WNT AGONIST R-SPONDIN. JRNL REF NAT.COMMUN. V. 4 2787 2013 JRNL REFN ISSN 2041-1723 JRNL PMID 24225776 JRNL DOI 10.1038/NCOMMS3787 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU, REMARK 3 STEINER,NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 95.45 REMARK 3 NUMBER OF REFLECTIONS : 6517 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.32048 REMARK 3 R VALUE (WORKING SET) : 0.31719 REMARK 3 FREE R VALUE : 0.39456 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.6 REMARK 3 FREE R VALUE TEST SET COUNT : 316 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.700 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.770 REMARK 3 REFLECTION IN BIN (WORKING SET) : 495 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.47 REMARK 3 BIN R VALUE (WORKING SET) : 0.423 REMARK 3 BIN FREE R VALUE SET COUNT : 24 REMARK 3 BIN FREE R VALUE : 0.444 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1679 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.5 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.015 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.96 REMARK 3 B22 (A**2) : 2.81 REMARK 3 B33 (A**2) : 1.91 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.95 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.558 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.567 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 28.460 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.860 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.754 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1717 ; 0.004 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1616 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2324 ; 0.748 ; 1.979 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3689 ; 0.630 ; 3.010 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 222 ; 4.883 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 69 ;32.609 ;23.478 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 271 ;13.964 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;10.541 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 258 ; 0.049 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1953 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 384 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 4C9V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-OCT-13. REMARK 100 THE PDBE ID CODE IS EBI-58625. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9686 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL (PILATUS) REMARK 200 DETECTOR MANUFACTURER : DECTRIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6845 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.70 REMARK 200 RESOLUTION RANGE LOW (A) : 32.76 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 3.8 REMARK 200 R MERGE (I) : 0.15 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.40 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 44.42350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 17.92050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 44.42350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 17.92050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 25 REMARK 465 THR A 26 REMARK 465 GLY A 27 REMARK 465 THR A 28 REMARK 465 THR A 29 REMARK 465 GLU A 30 REMARK 465 ARG A 31 REMARK 465 GLU A 32 REMARK 465 MET A 33 REMARK 465 ASP A 34 REMARK 465 GLN A 45 REMARK 465 ALA A 46 REMARK 465 GLU A 47 REMARK 465 GLU A 48 REMARK 465 SER A 49 REMARK 465 GLY A 50 REMARK 465 GLY A 51 REMARK 465 VAL A 52 REMARK 465 GLY A 53 REMARK 465 GLN A 54 REMARK 465 GLY A 55 REMARK 465 THR A 87 REMARK 465 SER A 88 REMARK 465 GLU A 89 REMARK 465 ASP A 90 REMARK 465 ASP A 91 REMARK 465 GLN A 92 REMARK 465 PRO A 106 REMARK 465 ASP A 107 REMARK 465 ARG A 108 REMARK 465 ASP A 109 REMARK 465 THR A 110 REMARK 465 GLN A 111 REMARK 465 GLN A 183 REMARK 465 GLU A 184 REMARK 465 GLN A 185 REMARK 465 PRO A 186 REMARK 465 LYS A 187 REMARK 465 TRP A 188 REMARK 465 LEU A 189 REMARK 465 HIS A 190 REMARK 465 HIS A 191 REMARK 465 ASP A 192 REMARK 465 GLY A 193 REMARK 465 THR A 194 REMARK 465 HIS A 195 REMARK 465 HIS A 196 REMARK 465 HIS A 197 REMARK 465 HIS A 198 REMARK 465 HIS A 199 REMARK 465 HIS A 200 REMARK 465 HIS A 201 REMARK 465 HIS A 202 REMARK 465 HIS A 203 REMARK 465 HIS A 204 REMARK 465 GLU B 32 REMARK 465 THR B 33 REMARK 465 GLY B 34 REMARK 465 GLY B 35 REMARK 465 THR B 36 REMARK 465 ASN B 37 REMARK 465 PRO B 38 REMARK 465 ILE B 39 REMARK 465 VAL B 142 REMARK 465 ASP B 143 REMARK 465 GLY B 144 REMARK 465 THR B 145 REMARK 465 LYS B 146 REMARK 465 HIS B 147 REMARK 465 HIS B 148 REMARK 465 HIS B 149 REMARK 465 HIS B 150 REMARK 465 HIS B 151 REMARK 465 HIS B 152 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 40 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 68 CG CD OE1 OE2 REMARK 470 ILE A 69 CG1 CG2 CD1 REMARK 470 THR A 93 OG1 CG2 REMARK 470 LYS A 94 CG CD CE NZ REMARK 470 GLU A 104 CG CD OE1 OE2 REMARK 470 HIS A 129 CG ND1 CD2 CE1 NE2 REMARK 470 LEU A 142 CG CD1 CD2 REMARK 470 GLN A 143 CG CD OE1 NE2 REMARK 470 GLN A 146 CG CD OE1 NE2 REMARK 470 ILE A 151 CG1 CG2 CD1 REMARK 470 GLN A 153 CG CD OE1 NE2 REMARK 470 LYS A 172 CG CD CE NZ REMARK 470 LYS A 174 CG CD CE NZ REMARK 470 GLU A 175 CG CD OE1 OE2 REMARK 470 LEU A 177 CG CD1 CD2 REMARK 470 LYS A 179 CG CD CE NZ REMARK 470 GLU A 181 CG CD OE1 OE2 REMARK 470 ARG B 86 CG CD NE CZ NH1 NH2 REMARK 470 MET B 139 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 85 -83.51 -128.07 REMARK 500 ASP A 138 88.15 -159.20 REMARK 500 LEU B 44 -60.59 -106.25 REMARK 500 GLU B 66 67.84 -154.67 REMARK 500 ASP B 137 -56.99 -120.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 7-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 8-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4C84 RELATED DB: PDB REMARK 900 ZEBRAFISH ZNRF3 ECTODOMAIN CRYSTAL FORM I REMARK 900 RELATED ID: 4C85 RELATED DB: PDB REMARK 900 ZEBRAFISH ZNRF3 ECTODOMAIN CRYSTAL FORM II REMARK 900 RELATED ID: 4C86 RELATED DB: PDB REMARK 900 MOUSE ZNRF3 ECTODOMAIN CRYSTAL FORM I REMARK 900 RELATED ID: 4C8A RELATED DB: PDB REMARK 900 MOUSE ZNRF3 ECTODOMAIN CRYSTAL FORM II REMARK 900 RELATED ID: 4C8C RELATED DB: PDB REMARK 900 MOUSE ZNRF3 ECTODOMAIN CRYSTAL FORM III REMARK 900 RELATED ID: 4C8F RELATED DB: PDB REMARK 900 MOUSE ZNRF3 ECTODOMAIN CRYSTAL FORM IV REMARK 900 RELATED ID: 4C8P RELATED DB: PDB REMARK 900 MOUSE ZNRF3 ECTODOMAIN CRYSTAL FORM V, DISULFIDE-BRIDGED REMARK 900 S90C VARIANT REMARK 900 RELATED ID: 4C8T RELATED DB: PDB REMARK 900 XENOPUS ZNRF3 ECTODOMAIN CRYSTAL FORM I REMARK 900 RELATED ID: 4C8U RELATED DB: PDB REMARK 900 XENOPUS ZNRF3 ECTODOMAIN CRYSTAL FORM II REMARK 900 RELATED ID: 4C8V RELATED DB: PDB REMARK 900 XENOPUS RSPO2 FU1-FU2 CRYSTAL FORM I REMARK 900 RELATED ID: 4C8W RELATED DB: PDB REMARK 900 XENOPUS RSPO2 FU1-FU2 CRYSTAL FORM II REMARK 900 RELATED ID: 4C99 RELATED DB: PDB REMARK 900 MOUSE ZNRF3 ECTODOMAIN IN COMPLEX WITH MOUSE RSPO2 FU1 REMARK 900 -FU2 CRYSTAL FORM I REMARK 900 RELATED ID: 4C9A RELATED DB: PDB REMARK 900 MOUSE ZNRF3 ECTODOMAIN IN COMPLEX WITH XENOPUS RSPO2 REMARK 900 FU1-FU2 (SELENO MET) CRYSTAL FORM I REMARK 900 RELATED ID: 4C9E RELATED DB: PDB REMARK 900 MOUSE ZNRF3 ECTODOMAIN IN COMPLEX WITH XENOPUS RSPO2 REMARK 900 FU1-FU2 (SELENO MET) CRYSTAL FORM II REMARK 900 RELATED ID: 4C9R RELATED DB: PDB REMARK 900 XENOPUS ZNRF3 ECTODOMAIN IN COMPLEX WITH XENOPUS RSPO2 REMARK 900 FU1-FU2 CRYSTAL FORM I REMARK 900 RELATED ID: 4C9V RELATED DB: PDB REMARK 900 XENOPUS RNF43 ECTODOMAIN IN COMPLEX WITH XENOPUS RSPO2 REMARK 900 FU1-FU2 DBREF 4C9V A 25 204 PDB 4C9V 4C9V 25 204 DBREF 4C9V B 35 144 UNP Q5M7L6 RSPO2_XENTR 35 144 SEQADV 4C9V GLU B 32 UNP Q5M7L6 EXPRESSION TAG SEQADV 4C9V THR B 33 UNP Q5M7L6 EXPRESSION TAG SEQADV 4C9V GLY B 34 UNP Q5M7L6 EXPRESSION TAG SEQADV 4C9V THR B 145 UNP Q5M7L6 EXPRESSION TAG SEQADV 4C9V LYS B 146 UNP Q5M7L6 EXPRESSION TAG SEQADV 4C9V HIS B 147 UNP Q5M7L6 EXPRESSION TAG SEQADV 4C9V HIS B 148 UNP Q5M7L6 EXPRESSION TAG SEQADV 4C9V HIS B 149 UNP Q5M7L6 EXPRESSION TAG SEQADV 4C9V HIS B 150 UNP Q5M7L6 EXPRESSION TAG SEQADV 4C9V HIS B 151 UNP Q5M7L6 EXPRESSION TAG SEQADV 4C9V HIS B 152 UNP Q5M7L6 EXPRESSION TAG SEQRES 1 A 180 GLU THR GLY THR THR GLU ARG GLU MET ASP VAL LYS ALA SEQRES 2 A 180 LEU ILE ARG VAL THR PRO LEU GLN ALA GLU GLU SER GLY SEQRES 3 A 180 GLY VAL GLY GLN GLY ASN LEU THR LEU GLU GLY LEU PHE SEQRES 4 A 180 ALA ARG VAL ALA GLU ILE SER PRO ALA GLU GLY ARG LEU SEQRES 5 A 180 LEU GLN PHE HIS PRO LEU SER LEU CYS ASN THR SER GLU SEQRES 6 A 180 ASP ASP GLN THR LYS PRO GLY PHE ILE SER ILE VAL LYS SEQRES 7 A 180 LEU GLU THR PRO ASP ARG ASP THR GLN PRO CYS LEU SER SEQRES 8 A 180 LEU ALA ASN LYS ALA ARG LEU ALA GLY GLU ARG GLY ALA SEQRES 9 A 180 HIS ALA VAL LEU PHE ASP ILE THR ASN ASP ARG GLY ALA SEQRES 10 A 180 LEU GLN GLN LEU GLN GLN PRO ALA GLY ILE ASN GLN PRO SEQRES 11 A 180 VAL VAL LEU ILE TRP GLY PRO ASP ALA GLU LYS LEU MET SEQRES 12 A 180 ASP VAL VAL ASN LYS ASN LYS GLU ALA LEU VAL LYS ILE SEQRES 13 A 180 GLU VAL GLN GLU GLN PRO LYS TRP LEU HIS HIS ASP GLY SEQRES 14 A 180 THR HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 1 B 121 GLU THR GLY GLY THR ASN PRO ILE CYS LYS GLY CYS LEU SEQRES 2 B 121 SER CYS SER LYS ASP ASN GLY CYS LEU ARG CYS GLN PRO SEQRES 3 B 121 LYS LEU PHE PHE TYR LEU ARG ARG GLU GLY MET ARG GLN SEQRES 4 B 121 TYR GLY GLU CYS LEU GLN SER CYS PRO PRO GLY TYR TYR SEQRES 5 B 121 GLY VAL ARG GLY PRO ASP MET ASN ARG CYS SER ARG CYS SEQRES 6 B 121 ARG ILE GLU ASN CYS ASP SER CYS PHE SER ARG ASP PHE SEQRES 7 B 121 CYS ILE LYS CYS LYS SER GLY PHE TYR SER HIS LYS GLY SEQRES 8 B 121 GLN CYS PHE GLU GLU CYS PRO GLU GLY PHE ALA PRO LEU SEQRES 9 B 121 ASP ASP THR MET VAL CYS VAL ASP GLY THR LYS HIS HIS SEQRES 10 B 121 HIS HIS HIS HIS HELIX 1 1 SER A 115 ARG A 126 1 12 HELIX 2 2 ARG A 139 GLN A 144 1 6 HELIX 3 3 GLY A 160 LYS A 172 1 13 SHEET 1 AA 8 LYS A 36 PRO A 43 0 SHEET 2 AA 8 LEU A 57 PHE A 63 -1 O LEU A 57 N VAL A 41 SHEET 3 AA 8 VAL A 155 ILE A 158 -1 O LEU A 157 N LEU A 62 SHEET 4 AA 8 ALA A 128 ASP A 134 1 O VAL A 131 N VAL A 156 SHEET 5 AA 8 PHE A 97 LYS A 102 1 O PHE A 97 N HIS A 129 SHEET 6 AA 8 ALA A 72 GLN A 78 1 O ARG A 75 N ILE A 98 SHEET 7 AA 8 ALA A 176 GLU A 181 -1 O ALA A 176 N LEU A 76 SHEET 8 AA 8 LYS A 36 PRO A 43 -1 O LEU A 38 N GLU A 181 SHEET 1 BA 2 CYS B 43 SER B 47 0 SHEET 2 BA 2 GLY B 51 CYS B 55 -1 O GLY B 51 N SER B 47 SHEET 1 BB 2 PHE B 60 GLU B 66 0 SHEET 2 BB 2 ARG B 69 LEU B 75 -1 O ARG B 69 N GLU B 66 SHEET 1 BC 2 TYR B 82 ARG B 86 0 SHEET 2 BC 2 ASN B 91 ARG B 95 -1 O ARG B 92 N VAL B 85 SHEET 1 BD 2 CYS B 101 SER B 106 0 SHEET 2 BD 2 PHE B 109 CYS B 113 -1 O PHE B 109 N PHE B 105 SHEET 1 BE 2 TYR B 118 HIS B 120 0 SHEET 2 BE 2 GLN B 123 PHE B 125 -1 O GLN B 123 N HIS B 120 SSBOND 1 CYS A 85 CYS A 113 1555 1555 2.03 SSBOND 2 CYS B 40 CYS B 46 1555 1555 2.03 SSBOND 3 CYS B 43 CYS B 52 1555 1555 2.03 SSBOND 4 CYS B 55 CYS B 74 1555 1555 2.03 SSBOND 5 CYS B 78 CYS B 93 1555 1555 2.03 SSBOND 6 CYS B 96 CYS B 104 1555 1555 2.03 SSBOND 7 CYS B 101 CYS B 110 1555 1555 2.03 SSBOND 8 CYS B 113 CYS B 124 1555 1555 2.03 SSBOND 9 CYS B 128 CYS B 141 1555 1555 2.04 CRYST1 88.847 35.841 87.876 90.00 114.58 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011255 0.000000 0.005148 0.00000 SCALE2 0.000000 0.027901 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012514 0.00000