HEADER STRUCTURAL PROTEIN 17-OCT-13 4CC3 TITLE COMPLEX OF HUMAN TUBA C-TERMINAL SH3 DOMAIN AND MENA PROLINE-RICH TITLE 2 PEPTIDE - H3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DYNAMIN-BINDING PROTEIN; COMPND 3 CHAIN: A, C, E, G; COMPND 4 FRAGMENT: C-TERMINAL SH3 DOMAIN, RESIDUES 1513-1577; COMPND 5 SYNONYM: SCAFFOLD PROTEIN TUBA; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PROTEIN ENABLED HOMOLOG; COMPND 9 CHAIN: B, D, F, H; COMPND 10 FRAGMENT: PROLINE-RICH PEPTIDE, RESIDUES 547-558; COMPND 11 SYNONYM: NPC-DERIVED PROLINE-RICH PROTEIN 1, NDPP-1, MURINE MENA; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: CODONPLUS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PGEX-6P-1; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 14 ORGANISM_COMMON: MOUSE; SOURCE 15 ORGANISM_TAXID: 10090 KEYWDS STRUCTURAL PROTEIN, TUBA, SRC HOMOLOGY 3, SH3 DOMAIN, MENA, NDPP-1, KEYWDS 2 PROLINE- RICH PEPTIDE, ACTIN CYTOSKELETON, CORTICAL TENSION EXPDTA X-RAY DIFFRACTION AUTHOR L.POLLE,L.RIGANO,R.JULIAN,K.IRETON,W.-D.SCHUBERT REVDAT 4 20-DEC-23 4CC3 1 REMARK REVDAT 3 19-FEB-14 4CC3 1 JRNL REVDAT 2 22-JAN-14 4CC3 1 JRNL REVDAT 1 30-OCT-13 4CC3 0 JRNL AUTH L.POLLE,L.A.RIGANO,R.JULIAN,K.IRETON,W.SCHUBERT JRNL TITL STRUCTURAL DETAILS OF HUMAN TUBA RECRUITMENT BY INLC OF JRNL TITL 2 LISTERIA MONOCYTOGENES ELUCIDATE BACTERIAL CELL-CELL JRNL TITL 3 SPREADING. JRNL REF STRUCTURE V. 22 304 2014 JRNL REFN ISSN 0969-2126 JRNL PMID 24332715 JRNL DOI 10.1016/J.STR.2013.10.017 REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 24356 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1282 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.97 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1673 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.07 REMARK 3 BIN R VALUE (WORKING SET) : 0.2510 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.3150 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2355 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 148 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -23.10000 REMARK 3 B22 (A**2) : -23.10000 REMARK 3 B33 (A**2) : 46.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.033 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.030 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.085 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.721 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2503 ; 0.019 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2363 ; 0.010 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3419 ; 2.051 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5471 ; 1.884 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 305 ; 7.012 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 114 ;37.239 ;24.825 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 393 ;16.603 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ; 9.294 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 355 ; 0.174 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2835 ; 0.014 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 574 ; 0.010 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1514 A 1577 REMARK 3 RESIDUE RANGE : B 1 B 12 REMARK 3 ORIGIN FOR THE GROUP (A): 11.2720 -25.4700 15.1950 REMARK 3 T TENSOR REMARK 3 T11: 0.2336 T22: 0.2108 REMARK 3 T33: 0.0851 T12: -0.0001 REMARK 3 T13: 0.0292 T23: 0.0272 REMARK 3 L TENSOR REMARK 3 L11: 3.7664 L22: 5.3810 REMARK 3 L33: 1.7622 L12: 0.7481 REMARK 3 L13: -0.0394 L23: -0.4850 REMARK 3 S TENSOR REMARK 3 S11: 0.1688 S12: -0.0295 S13: 0.3534 REMARK 3 S21: 0.2732 S22: -0.0996 S23: 0.5504 REMARK 3 S31: -0.1201 S32: 0.0040 S33: -0.0692 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1514 C 1577 REMARK 3 RESIDUE RANGE : D 1 D 12 REMARK 3 ORIGIN FOR THE GROUP (A): 24.2930 -7.7350 10.4460 REMARK 3 T TENSOR REMARK 3 T11: 0.2943 T22: 0.1828 REMARK 3 T33: 0.0272 T12: -0.0450 REMARK 3 T13: -0.0148 T23: -0.0038 REMARK 3 L TENSOR REMARK 3 L11: 2.8339 L22: 4.4340 REMARK 3 L33: 1.6859 L12: 0.4196 REMARK 3 L13: 0.7389 L23: 0.2620 REMARK 3 S TENSOR REMARK 3 S11: 0.1703 S12: -0.2715 S13: 0.0568 REMARK 3 S21: 0.4360 S22: -0.1280 S23: -0.3189 REMARK 3 S31: -0.1730 S32: 0.0118 S33: -0.0424 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1514 E 1577 REMARK 3 RESIDUE RANGE : F 1 F 12 REMARK 3 ORIGIN FOR THE GROUP (A): 24.5160 3.4880 -8.0980 REMARK 3 T TENSOR REMARK 3 T11: 0.2419 T22: 0.1864 REMARK 3 T33: 0.1018 T12: -0.0018 REMARK 3 T13: 0.0793 T23: 0.0193 REMARK 3 L TENSOR REMARK 3 L11: 3.0999 L22: 3.4409 REMARK 3 L33: 2.1448 L12: -1.1444 REMARK 3 L13: 0.1911 L23: -0.9657 REMARK 3 S TENSOR REMARK 3 S11: 0.0014 S12: 0.2541 S13: 0.3062 REMARK 3 S21: -0.2688 S22: -0.2239 S23: -0.5196 REMARK 3 S31: 0.0643 S32: 0.1647 S33: 0.2225 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 1514 G 1577 REMARK 3 RESIDUE RANGE : H 1 H 12 REMARK 3 ORIGIN FOR THE GROUP (A): 11.6190 19.8090 -15.6300 REMARK 3 T TENSOR REMARK 3 T11: 0.2181 T22: 0.2013 REMARK 3 T33: 0.0242 T12: -0.0110 REMARK 3 T13: 0.0441 T23: 0.0243 REMARK 3 L TENSOR REMARK 3 L11: 2.6216 L22: 4.3200 REMARK 3 L33: 1.9450 L12: -1.2255 REMARK 3 L13: -0.3216 L23: -1.0541 REMARK 3 S TENSOR REMARK 3 S11: 0.1177 S12: 0.2416 S13: 0.0064 REMARK 3 S21: -0.4349 S22: -0.2500 S23: -0.2714 REMARK 3 S31: 0.1540 S32: -0.0597 S33: 0.1322 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES WITH TLS ADDED REMARK 4 REMARK 4 4CC3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1290056936. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : KIRKPATRICK-BAEZ PAIR OF BI REMARK 200 -MORPH MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25648 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.42000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1ZUU REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.5 M NACL, 0.1 M BIS-TRIS PH 5.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 57.93500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.44879 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 24.36000 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 57.93500 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 33.44879 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 24.36000 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 57.93500 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 33.44879 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 24.36000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 66.89758 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 48.72000 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 66.89758 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 48.72000 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 66.89758 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 48.72000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1511 REMARK 465 PRO A 1512 REMARK 465 GLU A 1513 REMARK 465 GLY A 1514 REMARK 465 TYR A 1576 REMARK 465 THR A 1577 REMARK 465 GLY C 1511 REMARK 465 PRO C 1512 REMARK 465 THR C 1577 REMARK 465 GLY E 1511 REMARK 465 PRO E 1512 REMARK 465 GLU E 1513 REMARK 465 GLY E 1514 REMARK 465 ASN E 1515 REMARK 465 TYR E 1576 REMARK 465 THR E 1577 REMARK 465 GLY G 1511 REMARK 465 PRO G 1512 REMARK 465 GLU G 1513 REMARK 465 GLY G 1514 REMARK 465 ASN G 1515 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU C1513 CG CD OE1 OE2 REMARK 470 TYR C1576 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 THR G1577 CA C O CB OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2001 O HOH A 2011 1.98 REMARK 500 O PRO G 1529 O HOH G 2012 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O ALA F 10 O ALA H 12 3555 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG G1572 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A1537 -2.71 84.55 REMARK 500 THR E1574 -125.39 -118.10 REMARK 500 VAL G1517 130.66 100.79 REMARK 500 PHE G1545 33.75 -92.57 REMARK 500 TYR G1576 118.59 72.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PE4 C 2577 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 2576 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PE4 C 2577 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL E 2576 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C 2576 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4CC2 RELATED DB: PDB REMARK 900 COMPLEX OF HUMAN TUBA C-TERMINAL SH3 DOMAIN WITH HUMAN N-WASP REMARK 900 PROLINE-RICH PEPTIDE - P212121 REMARK 900 RELATED ID: 4CC4 RELATED DB: PDB REMARK 900 COMPLEX OF INLC OF LISTERIA MONOCYTOGENES AND HUMAN TUBA C-TERMINAL REMARK 900 SH3 DOMAIN REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE FIRST TWO RESIDUES OF THE SEQUENCE GP ARE REMNANTS OF REMARK 999 THE FUSION PROTEIN CLEAVAGE DBREF 4CC3 A 1513 1577 UNP Q6XZF7 DNMBP_HUMAN 1513 1577 DBREF 4CC3 C 1513 1577 UNP Q6XZF7 DNMBP_HUMAN 1513 1577 DBREF 4CC3 E 1513 1577 UNP Q6XZF7 DNMBP_HUMAN 1513 1577 DBREF 4CC3 G 1513 1577 UNP Q6XZF7 DNMBP_HUMAN 1513 1577 DBREF 4CC3 B 1 12 UNP Q03173 ENAH_MOUSE 547 558 DBREF 4CC3 D 1 12 UNP Q03173 ENAH_MOUSE 547 558 DBREF 4CC3 F 1 12 UNP Q03173 ENAH_MOUSE 547 558 DBREF 4CC3 H 1 12 UNP Q03173 ENAH_MOUSE 547 558 SEQADV 4CC3 GLY A 1511 UNP Q6XZF7 EXPRESSION TAG SEQADV 4CC3 PRO A 1512 UNP Q6XZF7 EXPRESSION TAG SEQADV 4CC3 GLY C 1511 UNP Q6XZF7 EXPRESSION TAG SEQADV 4CC3 PRO C 1512 UNP Q6XZF7 EXPRESSION TAG SEQADV 4CC3 GLY E 1511 UNP Q6XZF7 EXPRESSION TAG SEQADV 4CC3 PRO E 1512 UNP Q6XZF7 EXPRESSION TAG SEQADV 4CC3 GLY G 1511 UNP Q6XZF7 EXPRESSION TAG SEQADV 4CC3 PRO G 1512 UNP Q6XZF7 EXPRESSION TAG SEQRES 1 A 67 GLY PRO GLU GLY ASN GLN VAL TYR PHE ALA VAL TYR THR SEQRES 2 A 67 PHE LYS ALA ARG ASN PRO ASN GLU LEU SER VAL SER ALA SEQRES 3 A 67 ASN GLN LYS LEU LYS ILE LEU GLU PHE LYS ASP VAL THR SEQRES 4 A 67 GLY ASN THR GLU TRP TRP LEU ALA GLU VAL ASN GLY LYS SEQRES 5 A 67 LYS GLY TYR VAL PRO SER ASN TYR ILE ARG LYS THR GLU SEQRES 6 A 67 TYR THR SEQRES 1 B 12 PRO PRO PRO PRO LEU PRO SER GLY PRO ALA TYR ALA SEQRES 1 C 67 GLY PRO GLU GLY ASN GLN VAL TYR PHE ALA VAL TYR THR SEQRES 2 C 67 PHE LYS ALA ARG ASN PRO ASN GLU LEU SER VAL SER ALA SEQRES 3 C 67 ASN GLN LYS LEU LYS ILE LEU GLU PHE LYS ASP VAL THR SEQRES 4 C 67 GLY ASN THR GLU TRP TRP LEU ALA GLU VAL ASN GLY LYS SEQRES 5 C 67 LYS GLY TYR VAL PRO SER ASN TYR ILE ARG LYS THR GLU SEQRES 6 C 67 TYR THR SEQRES 1 D 12 PRO PRO PRO PRO LEU PRO SER GLY PRO ALA TYR ALA SEQRES 1 E 67 GLY PRO GLU GLY ASN GLN VAL TYR PHE ALA VAL TYR THR SEQRES 2 E 67 PHE LYS ALA ARG ASN PRO ASN GLU LEU SER VAL SER ALA SEQRES 3 E 67 ASN GLN LYS LEU LYS ILE LEU GLU PHE LYS ASP VAL THR SEQRES 4 E 67 GLY ASN THR GLU TRP TRP LEU ALA GLU VAL ASN GLY LYS SEQRES 5 E 67 LYS GLY TYR VAL PRO SER ASN TYR ILE ARG LYS THR GLU SEQRES 6 E 67 TYR THR SEQRES 1 F 12 PRO PRO PRO PRO LEU PRO SER GLY PRO ALA TYR ALA SEQRES 1 G 67 GLY PRO GLU GLY ASN GLN VAL TYR PHE ALA VAL TYR THR SEQRES 2 G 67 PHE LYS ALA ARG ASN PRO ASN GLU LEU SER VAL SER ALA SEQRES 3 G 67 ASN GLN LYS LEU LYS ILE LEU GLU PHE LYS ASP VAL THR SEQRES 4 G 67 GLY ASN THR GLU TRP TRP LEU ALA GLU VAL ASN GLY LYS SEQRES 5 G 67 LYS GLY TYR VAL PRO SER ASN TYR ILE ARG LYS THR GLU SEQRES 6 G 67 TYR THR SEQRES 1 H 12 PRO PRO PRO PRO LEU PRO SER GLY PRO ALA TYR ALA HET CL A2576 1 HET CL C2576 1 HET PE4 C2577 7 HET CL E2576 1 HETNAM CL CHLORIDE ION HETNAM PE4 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}- HETNAM 2 PE4 ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL HETSYN PE4 POLYETHYLENE GLYCOL PEG4000 FORMUL 9 CL 3(CL 1-) FORMUL 11 PE4 C16 H34 O8 FORMUL 13 HOH *148(H2 O) SHEET 1 AA 5 LYS A1562 PRO A1567 0 SHEET 2 AA 5 TRP A1554 VAL A1559 -1 O TRP A1555 N VAL A1566 SHEET 3 AA 5 LYS A1539 GLU A1544 -1 O LYS A1541 N GLU A1558 SHEET 4 AA 5 VAL A1517 ALA A1520 -1 O TYR A1518 N LEU A1540 SHEET 5 AA 5 ILE A1571 ARG A1572 -1 O ARG A1572 N PHE A1519 SHEET 1 CA 5 LYS C1562 PRO C1567 0 SHEET 2 CA 5 TRP C1554 VAL C1559 -1 O TRP C1555 N VAL C1566 SHEET 3 CA 5 LYS C1539 GLU C1544 -1 O LYS C1541 N GLU C1558 SHEET 4 CA 5 VAL C1517 ALA C1520 -1 O TYR C1518 N LEU C1540 SHEET 5 CA 5 ILE C1571 ARG C1572 -1 O ARG C1572 N PHE C1519 SHEET 1 EA 5 LYS E1562 PRO E1567 0 SHEET 2 EA 5 TRP E1554 VAL E1559 -1 O TRP E1555 N VAL E1566 SHEET 3 EA 5 LYS E1539 GLU E1544 -1 O LYS E1541 N GLU E1558 SHEET 4 EA 5 VAL E1517 ALA E1520 -1 O TYR E1518 N LEU E1540 SHEET 5 EA 5 ILE E1571 ARG E1572 -1 O ARG E1572 N PHE E1519 SHEET 1 GA 5 LYS G1562 PRO G1567 0 SHEET 2 GA 5 TRP G1554 VAL G1559 -1 O TRP G1555 N VAL G1566 SHEET 3 GA 5 LYS G1539 GLU G1544 -1 O LYS G1541 N GLU G1558 SHEET 4 GA 5 TYR G1518 ALA G1520 -1 O TYR G1518 N LEU G1540 SHEET 5 GA 5 ILE G1571 LYS G1573 -1 O ARG G1572 N PHE G1519 SITE 1 AC1 1 SER A1533 SITE 1 AC2 6 GLU C1553 SER C1568 ASN C1569 ARG E1527 SITE 2 AC2 6 ASN E1528 GLU E1531 SITE 1 AC3 2 SER E1533 LYS E1562 SITE 1 AC4 3 LYS C1525 ARG C1527 HOH C2032 CRYST1 115.870 115.870 73.080 90.00 90.00 120.00 H 3 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008630 0.004983 0.000000 0.00000 SCALE2 0.000000 0.009965 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013684 0.00000