HEADER CELL CYCLE 25-NOV-13 4CGK TITLE CRYSTAL STRUCTURE OF THE ESSENTIAL PROTEIN PCSB FROM STREPTOCOCCUS TITLE 2 PNEUMONIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SECRETED 45 KDA PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PCSB; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 373153; SOURCE 4 STRAIN: D39; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS CELL CYCLE, PEPTIDOGLYCAN, CHAP, CELL DIVISION EXPDTA X-RAY DIFFRACTION AUTHOR S.G.BARTUAL,D.STRAUME,G.A.STAMSAS,C.ALFONSO,M.MARTINEZ-RIPOLL, AUTHOR 2 L.S.HAVARSTEIN,J.A.HERMOSO REVDAT 1 21-MAY-14 4CGK 0 JRNL AUTH S.G.BARTUAL,D.STRAUME,G.A.STAMSAS,I.G.MUNOZ,C.ALFONSO, JRNL AUTH 2 M.MARTINEZ-RIPOLL,L.S.HAVARSTEIN,J.A.HERMOSO JRNL TITL STRUCTURAL BASIS OF PCSB-MEDIATED CELL SEPARATION IN JRNL TITL 2 STREPTOCOCCUS PNEUMONIAE. JRNL REF NAT.COMMUN. V. 5 3842 2014 JRNL REFN ISSN 2041-1723 JRNL PMID 24804636 JRNL DOI 10.1038/NCOMMS4842 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU, REMARK 3 STEINER,NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.63 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 99.85 REMARK 3 NUMBER OF REFLECTIONS : 36230 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.23933 REMARK 3 R VALUE (WORKING SET) : 0.23761 REMARK 3 FREE R VALUE : 0.27173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.0 REMARK 3 FREE R VALUE TEST SET COUNT : 1907 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.550 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.616 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2628 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.64 REMARK 3 BIN R VALUE (WORKING SET) : 0.324 REMARK 3 BIN FREE R VALUE SET COUNT : 141 REMARK 3 BIN FREE R VALUE : 0.375 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5231 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 448 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 77.410 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 36.70 REMARK 3 B22 (A**2) : 36.70 REMARK 3 B33 (A**2) : -73.40 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.085 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.059 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.178 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.715 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.936 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.914 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5312 ; 0.005 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5161 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7203 ; 0.834 ; 1.927 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11659 ; 1.709 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 699 ; 4.232 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 245 ;35.928 ;26.408 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 890 ;15.512 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;13.793 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 831 ; 0.047 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6301 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1187 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2799 ; 1.447 ; 6.928 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2798 ; 1.447 ; 6.928 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3497 ; 2.642 ;10.388 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2512 ; 1.124 ; 6.930 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 42 A 392 REMARK 3 ORIGIN FOR THE GROUP (A): 47.5184 52.6185 9.2117 REMARK 3 T TENSOR REMARK 3 T11: 0.0451 T22: 0.0490 REMARK 3 T33: 0.0448 T12: 0.0174 REMARK 3 T13: -0.0392 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 0.2490 L22: 0.0473 REMARK 3 L33: 0.6665 L12: 0.0478 REMARK 3 L13: 0.2235 L23: -0.0268 REMARK 3 S TENSOR REMARK 3 S11: -0.0265 S12: 0.0379 S13: 0.0008 REMARK 3 S21: 0.0098 S22: -0.0179 S23: -0.0290 REMARK 3 S31: -0.0658 S32: 0.0311 S33: 0.0443 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 45 B 392 REMARK 3 ORIGIN FOR THE GROUP (A): 31.4972 38.9538 -16.0539 REMARK 3 T TENSOR REMARK 3 T11: 0.0370 T22: 0.0987 REMARK 3 T33: 0.0294 T12: 0.0109 REMARK 3 T13: -0.0207 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 0.1806 L22: 0.1475 REMARK 3 L33: 0.6048 L12: 0.0305 REMARK 3 L13: 0.1507 L23: -0.1367 REMARK 3 S TENSOR REMARK 3 S11: 0.0281 S12: 0.0459 S13: -0.0267 REMARK 3 S21: -0.0178 S22: 0.0171 S23: -0.0394 REMARK 3 S31: 0.1260 S32: -0.0500 S33: -0.0452 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. U VALUES WITH TLS ADDED REMARK 4 REMARK 4 4CGK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-NOV-13. REMARK 100 THE PDBE ID CODE IS EBI-59076. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL (PILATUS 6M) REMARK 200 DETECTOR MANUFACTURER : DECTRIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38172 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.55 REMARK 200 RESOLUTION RANGE LOW (A) : 44.63 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.6 REMARK 200 R MERGE (I) : 0.08 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.90 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 11 REMARK 200 R MERGE FOR SHELL (I) : 0.64 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.90 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.5 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.9 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS GREW IN 2UL DROPLETS REMARK 280 FORMED BY MIXING 1 UL OF PROTEIN SOLUTION AT 10 MG ML-1 REMARK 280 (BUFFERED IN 20 MM TRIS-HCL PH 7.5) AND 1 UL L OF REMARK 280 PRECIPITANT SOLUTION FORMED BY 12% (V/V) POLYETHYLENGLYCOL REMARK 280 4000, 0.1M HEPES PH 7.5, 0.2M MAGNESIUM ACETATE IN 1:1 REMARK 280 VOLUME RATIO REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.21233 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 84.42467 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 84.42467 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 42.21233 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 73140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -235.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 LYS A 3 REMARK 465 LYS A 4 REMARK 465 ILE A 5 REMARK 465 LEU A 6 REMARK 465 ALA A 7 REMARK 465 SER A 8 REMARK 465 LEU A 9 REMARK 465 LEU A 10 REMARK 465 LEU A 11 REMARK 465 SER A 12 REMARK 465 THR A 13 REMARK 465 VAL A 14 REMARK 465 MET A 15 REMARK 465 VAL A 16 REMARK 465 SER A 17 REMARK 465 GLN A 18 REMARK 465 VAL A 19 REMARK 465 ALA A 20 REMARK 465 VAL A 21 REMARK 465 LEU A 22 REMARK 465 THR A 23 REMARK 465 THR A 24 REMARK 465 ALA A 25 REMARK 465 HIS A 26 REMARK 465 ALA A 27 REMARK 465 GLU A 28 REMARK 465 THR A 29 REMARK 465 THR A 30 REMARK 465 ASP A 31 REMARK 465 ASP A 32 REMARK 465 LYS A 33 REMARK 465 ILE A 34 REMARK 465 ALA A 35 REMARK 465 ALA A 36 REMARK 465 GLN A 37 REMARK 465 ASP A 38 REMARK 465 ASN A 39 REMARK 465 LYS A 40 REMARK 465 ILE A 41 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 LYS B 3 REMARK 465 LYS B 4 REMARK 465 ILE B 5 REMARK 465 LEU B 6 REMARK 465 ALA B 7 REMARK 465 SER B 8 REMARK 465 LEU B 9 REMARK 465 LEU B 10 REMARK 465 LEU B 11 REMARK 465 SER B 12 REMARK 465 THR B 13 REMARK 465 VAL B 14 REMARK 465 MET B 15 REMARK 465 VAL B 16 REMARK 465 SER B 17 REMARK 465 GLN B 18 REMARK 465 VAL B 19 REMARK 465 ALA B 20 REMARK 465 VAL B 21 REMARK 465 LEU B 22 REMARK 465 THR B 23 REMARK 465 THR B 24 REMARK 465 ALA B 25 REMARK 465 HIS B 26 REMARK 465 ALA B 27 REMARK 465 GLU B 28 REMARK 465 THR B 29 REMARK 465 THR B 30 REMARK 465 ASP B 31 REMARK 465 ASP B 32 REMARK 465 LYS B 33 REMARK 465 ILE B 34 REMARK 465 ALA B 35 REMARK 465 ALA B 36 REMARK 465 GLN B 37 REMARK 465 ASP B 38 REMARK 465 ASN B 39 REMARK 465 LYS B 40 REMARK 465 ILE B 41 REMARK 465 SER B 42 REMARK 465 ASN B 43 REMARK 465 LEU B 44 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN B 49 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 112 38.03 -145.00 REMARK 500 ASN A 114 -67.89 72.44 REMARK 500 ASN A 126 39.53 -66.16 REMARK 500 LYS A 128 -72.55 -154.17 REMARK 500 ILE A 130 80.80 57.70 REMARK 500 GLU A 132 -104.22 63.00 REMARK 500 THR A 209 62.03 -100.48 REMARK 500 ALA A 210 141.60 -173.68 REMARK 500 ASN A 254 74.04 -66.74 REMARK 500 PRO A 271 102.94 -51.88 REMARK 500 THR A 380 68.85 -117.82 REMARK 500 ALA B 46 -59.49 58.32 REMARK 500 ALA B 108 -56.21 67.85 REMARK 500 GLN B 112 37.38 -144.53 REMARK 500 THR B 131 86.11 -155.97 REMARK 500 GLU B 132 -30.41 -134.30 REMARK 500 ALA B 208 -127.19 48.83 REMARK 500 THR B 209 -58.23 178.62 REMARK 500 GLU B 211 -145.48 -111.69 REMARK 500 ASN B 254 74.57 -68.30 REMARK 500 ALA B 270 104.56 80.52 REMARK 500 PRO B 271 103.10 -52.54 REMARK 500 THR B 380 68.31 -117.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1393 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B2186 O REMARK 620 2 THR B 368 OG1 111.1 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1393 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1394 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B1393 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 B1394 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1395 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1396 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1397 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1398 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1400 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B1395 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1401 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1399 DBREF 4CGK A 1 392 UNP Q04HW2 Q04HW2_STRP2 1 392 DBREF 4CGK B 1 392 UNP Q04HW2 Q04HW2_STRP2 1 392 SEQRES 1 A 392 MET LYS LYS LYS ILE LEU ALA SER LEU LEU LEU SER THR SEQRES 2 A 392 VAL MET VAL SER GLN VAL ALA VAL LEU THR THR ALA HIS SEQRES 3 A 392 ALA GLU THR THR ASP ASP LYS ILE ALA ALA GLN ASP ASN SEQRES 4 A 392 LYS ILE SER ASN LEU THR ALA GLN GLN GLN GLU ALA GLN SEQRES 5 A 392 LYS GLN VAL ASP GLN ILE GLN GLU GLN VAL SER ALA ILE SEQRES 6 A 392 GLN ALA GLU GLN SER ASN LEU GLN ALA GLU ASN ASP ARG SEQRES 7 A 392 LEU GLN ALA GLU SER LYS LYS LEU GLU GLY GLU ILE THR SEQRES 8 A 392 GLU LEU SER LYS ASN ILE VAL SER ARG ASN GLN SER LEU SEQRES 9 A 392 GLU LYS GLN ALA ARG SER ALA GLN THR ASN GLY ALA VAL SEQRES 10 A 392 THR SER TYR ILE ASN THR ILE VAL ASN SER LYS SER ILE SEQRES 11 A 392 THR GLU ALA ILE SER ARG VAL ALA ALA MET SER GLU ILE SEQRES 12 A 392 VAL SER ALA ASN ASN LYS MET LEU GLU GLN GLN LYS ALA SEQRES 13 A 392 ASP LYS LYS ALA ILE SER GLU LYS GLN VAL ALA ASN ASN SEQRES 14 A 392 ASP ALA ILE ASN THR VAL ILE ALA ASN GLN GLN LYS LEU SEQRES 15 A 392 ALA ASP ASP ALA GLN ALA LEU THR THR LYS GLN ALA GLU SEQRES 16 A 392 LEU LYS ALA ALA GLU LEU SER LEU ALA ALA GLU LYS ALA SEQRES 17 A 392 THR ALA GLU GLY GLU LYS ALA SER LEU LEU GLU GLN LYS SEQRES 18 A 392 ALA ALA ALA GLU ALA GLU ALA ARG ALA ALA ALA VAL ALA SEQRES 19 A 392 GLU ALA ALA TYR LYS GLU LYS ARG ALA SER GLN GLN GLN SEQRES 20 A 392 SER VAL LEU ALA SER ALA ASN THR ASN LEU THR ALA GLN SEQRES 21 A 392 VAL GLN ALA VAL SER GLU SER ALA ALA ALA PRO VAL ARG SEQRES 22 A 392 ALA LYS VAL ARG PRO THR TYR SER THR ASN ALA SER SER SEQRES 23 A 392 TYR PRO ILE GLY GLU CYS THR TRP GLY VAL LYS THR LEU SEQRES 24 A 392 ALA PRO TRP ALA GLY ASP TYR TRP GLY ASN GLY ALA GLN SEQRES 25 A 392 TRP ALA THR SER ALA ALA ALA ALA GLY PHE ARG THR GLY SEQRES 26 A 392 SER THR PRO GLN VAL GLY ALA ILE ALA CYS TRP ASN ASP SEQRES 27 A 392 GLY GLY TYR GLY HIS VAL ALA VAL VAL THR ALA VAL GLU SEQRES 28 A 392 SER THR THR ARG ILE GLN VAL SER GLU SER ASN TYR ALA SEQRES 29 A 392 GLY ASN ARG THR ILE GLY ASN HIS ARG GLY TRP PHE ASN SEQRES 30 A 392 PRO THR THR THR SER GLU GLY PHE VAL THR TYR ILE TYR SEQRES 31 A 392 ALA ASP SEQRES 1 B 392 MET LYS LYS LYS ILE LEU ALA SER LEU LEU LEU SER THR SEQRES 2 B 392 VAL MET VAL SER GLN VAL ALA VAL LEU THR THR ALA HIS SEQRES 3 B 392 ALA GLU THR THR ASP ASP LYS ILE ALA ALA GLN ASP ASN SEQRES 4 B 392 LYS ILE SER ASN LEU THR ALA GLN GLN GLN GLU ALA GLN SEQRES 5 B 392 LYS GLN VAL ASP GLN ILE GLN GLU GLN VAL SER ALA ILE SEQRES 6 B 392 GLN ALA GLU GLN SER ASN LEU GLN ALA GLU ASN ASP ARG SEQRES 7 B 392 LEU GLN ALA GLU SER LYS LYS LEU GLU GLY GLU ILE THR SEQRES 8 B 392 GLU LEU SER LYS ASN ILE VAL SER ARG ASN GLN SER LEU SEQRES 9 B 392 GLU LYS GLN ALA ARG SER ALA GLN THR ASN GLY ALA VAL SEQRES 10 B 392 THR SER TYR ILE ASN THR ILE VAL ASN SER LYS SER ILE SEQRES 11 B 392 THR GLU ALA ILE SER ARG VAL ALA ALA MET SER GLU ILE SEQRES 12 B 392 VAL SER ALA ASN ASN LYS MET LEU GLU GLN GLN LYS ALA SEQRES 13 B 392 ASP LYS LYS ALA ILE SER GLU LYS GLN VAL ALA ASN ASN SEQRES 14 B 392 ASP ALA ILE ASN THR VAL ILE ALA ASN GLN GLN LYS LEU SEQRES 15 B 392 ALA ASP ASP ALA GLN ALA LEU THR THR LYS GLN ALA GLU SEQRES 16 B 392 LEU LYS ALA ALA GLU LEU SER LEU ALA ALA GLU LYS ALA SEQRES 17 B 392 THR ALA GLU GLY GLU LYS ALA SER LEU LEU GLU GLN LYS SEQRES 18 B 392 ALA ALA ALA GLU ALA GLU ALA ARG ALA ALA ALA VAL ALA SEQRES 19 B 392 GLU ALA ALA TYR LYS GLU LYS ARG ALA SER GLN GLN GLN SEQRES 20 B 392 SER VAL LEU ALA SER ALA ASN THR ASN LEU THR ALA GLN SEQRES 21 B 392 VAL GLN ALA VAL SER GLU SER ALA ALA ALA PRO VAL ARG SEQRES 22 B 392 ALA LYS VAL ARG PRO THR TYR SER THR ASN ALA SER SER SEQRES 23 B 392 TYR PRO ILE GLY GLU CYS THR TRP GLY VAL LYS THR LEU SEQRES 24 B 392 ALA PRO TRP ALA GLY ASP TYR TRP GLY ASN GLY ALA GLN SEQRES 25 B 392 TRP ALA THR SER ALA ALA ALA ALA GLY PHE ARG THR GLY SEQRES 26 B 392 SER THR PRO GLN VAL GLY ALA ILE ALA CYS TRP ASN ASP SEQRES 27 B 392 GLY GLY TYR GLY HIS VAL ALA VAL VAL THR ALA VAL GLU SEQRES 28 B 392 SER THR THR ARG ILE GLN VAL SER GLU SER ASN TYR ALA SEQRES 29 B 392 GLY ASN ARG THR ILE GLY ASN HIS ARG GLY TRP PHE ASN SEQRES 30 B 392 PRO THR THR THR SER GLU GLY PHE VAL THR TYR ILE TYR SEQRES 31 B 392 ALA ASP HET EDO A1393 4 HET EDO A1394 4 HET MG B1393 1 HET PG4 B1394 13 HET CL A1395 1 HET CL A1396 1 HET CL A1397 1 HET CL A1398 1 HET CL A1400 1 HET CL B1395 1 HET CL A1401 1 HET CL A1399 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 2(C2 H6 O2) FORMUL 4 PG4 C8 H18 O5 FORMUL 5 CL 8(CL 1-) FORMUL 6 MG MG 2+ FORMUL 7 HOH *448(H2 O) HELIX 1 1 THR A 45 GLN A 112 1 68 HELIX 2 2 ALA A 116 ASN A 126 1 11 HELIX 3 3 SER A 135 ALA A 208 1 74 HELIX 4 4 ALA A 210 ALA A 253 1 44 HELIX 5 5 ASN A 256 SER A 267 1 12 HELIX 6 6 GLU A 291 ALA A 300 1 10 HELIX 7 7 ASN A 309 ALA A 311 5 3 HELIX 8 8 GLN A 312 GLY A 321 1 10 HELIX 9 9 ALA B 46 GLN B 107 1 62 HELIX 10 10 ALA B 116 SER B 127 1 12 HELIX 11 11 ARG B 136 ALA B 208 1 73 HELIX 12 12 GLU B 213 ALA B 253 1 41 HELIX 13 13 ASN B 256 SER B 267 1 12 HELIX 14 14 GLU B 291 ALA B 300 1 10 HELIX 15 15 ASN B 309 ALA B 311 5 3 HELIX 16 16 GLN B 312 GLY B 321 1 10 SHEET 1 AA 5 THR A 324 GLY A 325 0 SHEET 2 AA 5 PHE A 385 ILE A 389 -1 O TYR A 388 N GLY A 325 SHEET 3 AA 5 ILE A 333 ASN A 337 -1 O ILE A 333 N ILE A 389 SHEET 4 AA 5 HIS A 343 SER A 352 -1 O HIS A 343 N TRP A 336 SHEET 5 AA 5 ARG A 355 SER A 359 -1 O ARG A 355 N GLU A 351 SHEET 1 BA 5 THR B 324 GLY B 325 0 SHEET 2 BA 5 PHE B 385 ILE B 389 -1 O TYR B 388 N GLY B 325 SHEET 3 BA 5 ILE B 333 ASN B 337 -1 O ILE B 333 N ILE B 389 SHEET 4 BA 5 HIS B 343 SER B 352 -1 O HIS B 343 N TRP B 336 SHEET 5 BA 5 ARG B 355 SER B 359 -1 O ARG B 355 N GLU B 351 LINK MG MG B1393 O HOH B2186 1555 1555 2.17 LINK MG MG B1393 OG1 THR B 368 1555 1555 2.98 CISPEP 1 THR B 131 GLU B 132 0 -13.80 CISPEP 2 THR B 209 ALA B 210 0 2.24 CISPEP 3 GLU B 211 GLY B 212 0 10.13 CISPEP 4 ALA B 269 ALA B 270 0 7.88 SITE 1 AC1 2 LEU A 257 THR A 258 SITE 1 AC2 5 PHE A 385 VAL A 386 CL A1399 HOH A2202 SITE 2 AC2 5 HOH A2252 SITE 1 AC3 4 THR B 368 GLY B 370 HIS B 372 HOH B2186 SITE 1 AC4 10 GLU B 291 CYS B 292 GLY B 342 HIS B 343 SITE 2 AC4 10 ASN B 362 ALA B 364 SER B 382 GLU B 383 SITE 3 AC4 10 HOH B2179 HOH B2187 SITE 1 AC5 1 HIS A 372 SITE 1 AC6 1 ARG A 367 SITE 1 AC7 2 ASN A 256 LEU B 299 SITE 1 AC8 1 ALA A 364 SITE 1 AC9 1 CL A1401 SITE 1 BC1 1 ILE B 289 SITE 1 BC2 2 CL A1400 HOH B2118 SITE 1 BC3 6 THR A 379 GLY A 384 PHE A 385 EDO A1394 SITE 2 BC3 6 GLY B 384 PHE B 385 CRYST1 125.815 125.815 126.637 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007948 0.004589 0.000000 0.00000 SCALE2 0.000000 0.009178 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007897 0.00000