data_4CHD # _entry.id 4CHD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4CHD PDBE EBI-59130 WWPDB D_1290059130 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4CGS unspecified 'CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF THE PA SUBUNIT OF DHORI VIRUS POLYMERASE' PDB 4CGX unspecified 'CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF THE PA SUBUNIT OF THOGOTO VIRUS POLYMERASE (FORM 1)' PDB 4CHC unspecified 'CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF THE PA SUBUNIT OF THOGOTO VIRUS POLYMERASE (FORM 2)' PDB 4CHE unspecified 'CRYSTAL STRUCTURE OF THE PUTATIVE CAP-BINDING DOMAIN OF THE PB2 SUBUNIT OF THOGOTO VIRUS POLYMERASE' PDB 4CHF unspecified 'CRYSTAL STRUCTURE OF THE PUTATIVE CAP-BINDING DOMAIN OF THE PB2 SUBUNIT OF THOGOTO VIRUS POLYMERASE (FORM 2)' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4CHD _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2013-12-01 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Guilligay, D.' 1 'Kadlec, J.' 2 'Crepin, T.' 3 'Lunardi, T.' 4 'Bouvier, D.' 5 'Kochs, G.' 6 'Ruigrok, R.W.H.' 7 'Cusack, S.' 8 # _citation.id primary _citation.title 'Comparative Structural and Functional Analysis of Orthomyxovirus Polymerase CAP-Snatching Domains.' _citation.journal_abbrev 'Plos One' _citation.journal_volume 9 _citation.page_first 84973 _citation.page_last ? _citation.year 2014 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24454773 _citation.pdbx_database_id_DOI 10.1371/JOURNAL.PONE.0084973 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Guilligay, D.' 1 primary 'Kadlec, J.' 2 primary 'Crepin, T.' 3 primary 'Lunardi, T.' 4 primary 'Bouvier, D.' 5 primary 'Kochs, G.' 6 primary 'Ruigrok, R.W.H.' 7 primary 'Cusack, S.' 8 # _cell.entry_id 4CHD _cell.length_a 65.480 _cell.length_b 65.480 _cell.length_c 74.780 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CHD _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'POLYMERASE ACIDIC PROTEIN' 18304.828 1 ? ? ;CENTRAL '627' DOMAIN, RESIDUES 543-701 ; ? 2 water nat water 18.015 17 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RNA-DIRECTED RNA POLYMERASE SUBUNIT P3' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GAMDIYQDPFSRAKSLLKSTILHAERCKEFVGNMLEEYQDPAETTVQSLVPINTWGKSAKRKLQEEITSDPDWHQCPRKR AKMSYLAIIAGSIQDRDKKQTNVPRAFMLRGSQIEYDMKATRGLVVDTTNRIIVGGETVLREGKGGPEGYVQTGVFEEQP RC ; _entity_poly.pdbx_seq_one_letter_code_can ;GAMDIYQDPFSRAKSLLKSTILHAERCKEFVGNMLEEYQDPAETTVQSLVPINTWGKSAKRKLQEEITSDPDWHQCPRKR AKMSYLAIIAGSIQDRDKKQTNVPRAFMLRGSQIEYDMKATRGLVVDTTNRIIVGGETVLREGKGGPEGYVQTGVFEEQP RC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 ASP n 1 5 ILE n 1 6 TYR n 1 7 GLN n 1 8 ASP n 1 9 PRO n 1 10 PHE n 1 11 SER n 1 12 ARG n 1 13 ALA n 1 14 LYS n 1 15 SER n 1 16 LEU n 1 17 LEU n 1 18 LYS n 1 19 SER n 1 20 THR n 1 21 ILE n 1 22 LEU n 1 23 HIS n 1 24 ALA n 1 25 GLU n 1 26 ARG n 1 27 CYS n 1 28 LYS n 1 29 GLU n 1 30 PHE n 1 31 VAL n 1 32 GLY n 1 33 ASN n 1 34 MET n 1 35 LEU n 1 36 GLU n 1 37 GLU n 1 38 TYR n 1 39 GLN n 1 40 ASP n 1 41 PRO n 1 42 ALA n 1 43 GLU n 1 44 THR n 1 45 THR n 1 46 VAL n 1 47 GLN n 1 48 SER n 1 49 LEU n 1 50 VAL n 1 51 PRO n 1 52 ILE n 1 53 ASN n 1 54 THR n 1 55 TRP n 1 56 GLY n 1 57 LYS n 1 58 SER n 1 59 ALA n 1 60 LYS n 1 61 ARG n 1 62 LYS n 1 63 LEU n 1 64 GLN n 1 65 GLU n 1 66 GLU n 1 67 ILE n 1 68 THR n 1 69 SER n 1 70 ASP n 1 71 PRO n 1 72 ASP n 1 73 TRP n 1 74 HIS n 1 75 GLN n 1 76 CYS n 1 77 PRO n 1 78 ARG n 1 79 LYS n 1 80 ARG n 1 81 ALA n 1 82 LYS n 1 83 MET n 1 84 SER n 1 85 TYR n 1 86 LEU n 1 87 ALA n 1 88 ILE n 1 89 ILE n 1 90 ALA n 1 91 GLY n 1 92 SER n 1 93 ILE n 1 94 GLN n 1 95 ASP n 1 96 ARG n 1 97 ASP n 1 98 LYS n 1 99 LYS n 1 100 GLN n 1 101 THR n 1 102 ASN n 1 103 VAL n 1 104 PRO n 1 105 ARG n 1 106 ALA n 1 107 PHE n 1 108 MET n 1 109 LEU n 1 110 ARG n 1 111 GLY n 1 112 SER n 1 113 GLN n 1 114 ILE n 1 115 GLU n 1 116 TYR n 1 117 ASP n 1 118 MET n 1 119 LYS n 1 120 ALA n 1 121 THR n 1 122 ARG n 1 123 GLY n 1 124 LEU n 1 125 VAL n 1 126 VAL n 1 127 ASP n 1 128 THR n 1 129 THR n 1 130 ASN n 1 131 ARG n 1 132 ILE n 1 133 ILE n 1 134 VAL n 1 135 GLY n 1 136 GLY n 1 137 GLU n 1 138 THR n 1 139 VAL n 1 140 LEU n 1 141 ARG n 1 142 GLU n 1 143 GLY n 1 144 LYS n 1 145 GLY n 1 146 GLY n 1 147 PRO n 1 148 GLU n 1 149 GLY n 1 150 TYR n 1 151 VAL n 1 152 GLN n 1 153 THR n 1 154 GLY n 1 155 VAL n 1 156 PHE n 1 157 GLU n 1 158 GLU n 1 159 GLN n 1 160 PRO n 1 161 ARG n 1 162 CYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'THOGOTO VIRUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11569 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant 'CODON PLUS-RIL' _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET-M11 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PB2_THOGV _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q9YNA4 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4CHD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 162 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9YNA4 _struct_ref_seq.db_align_beg 543 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 701 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 543 _struct_ref_seq.pdbx_auth_seq_align_end 701 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4CHD GLY A 1 ? UNP Q9YNA4 ? ? 'expression tag' 540 1 1 4CHD ALA A 2 ? UNP Q9YNA4 ? ? 'expression tag' 541 2 1 4CHD MET A 3 ? UNP Q9YNA4 ? ? 'expression tag' 542 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4CHD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.2 _exptl_crystal.density_percent_sol 44.1 _exptl_crystal.description 'SOLVED WITH SINGLE SITE MERCURY DERIVATIVE' # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;THE PROTEIN WAS CONCENTRATED TO 2.3 MG/ML IN 250 MM NACL, 50 MM TRIS PH 8.0 AND 2 MM DTT AND CRYSTALS WERE GROWN IN 0.1 M HEPES PH 7.0, 0.2 M AMMONIUM SULPHATE AND 22% PEG3350 ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2008-07-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8726 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-2 _diffrn_source.pdbx_wavelength 0.8726 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4CHD _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 2.40 _reflns.number_obs 6604 _reflns.number_all ? _reflns.percent_possible_obs 97.4 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.10 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.95 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.40 _reflns_shell.d_res_low 2.50 _reflns_shell.percent_possible_all 98.7 _reflns_shell.Rmerge_I_obs 0.56 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.60 _reflns_shell.pdbx_redundancy 4.01 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4CHD _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 6288 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 49.27 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 97.36 _refine.ls_R_factor_obs 0.20891 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20738 _refine.ls_R_factor_R_free 0.23904 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 316 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.926 _refine.B_iso_mean 50.362 _refine.aniso_B[1][1] -1.29 _refine.aniso_B[2][2] -1.29 _refine.aniso_B[3][3] 2.58 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES WITH TLS ADDED' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.384 _refine.pdbx_overall_ESU_R_Free 0.245 _refine.overall_SU_ML 0.175 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 16.159 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1073 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 17 _refine_hist.number_atoms_total 1090 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 49.27 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.019 ? 1090 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1075 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.054 1.966 ? 1468 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.697 3.000 ? 2476 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.384 5.000 ? 134 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.652 23.469 ? 49 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.025 15.000 ? 210 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.194 15.000 ? 11 'X-RAY DIFFRACTION' ? r_chiral_restr 0.060 0.200 ? 165 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.021 ? 1210 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 241 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.400 _refine_ls_shell.d_res_low 2.462 _refine_ls_shell.number_reflns_R_work 455 _refine_ls_shell.R_factor_R_work 0.308 _refine_ls_shell.percent_reflns_obs 98.97 _refine_ls_shell.R_factor_R_free 0.499 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 24 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 4CHD _struct.title ;Crystal structure of the '627' domain of the PB2 subunit of Thogoto virus polymerase ; _struct.pdbx_descriptor 'POLYMERASE ACIDIC PROTEIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4CHD _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 8 ? LEU A 22 ? ASP A 547 LEU A 561 1 ? 15 HELX_P HELX_P2 2 HIS A 23 ? GLU A 37 ? HIS A 562 GLU A 576 1 ? 15 HELX_P HELX_P3 3 ALA A 42 ? VAL A 50 ? ALA A 581 VAL A 589 1 ? 9 HELX_P HELX_P4 4 TRP A 55 ? ASP A 70 ? TRP A 594 ASP A 609 1 ? 16 HELX_P HELX_P5 5 ASP A 72 ? GLN A 75 ? ASP A 611 GLN A 614 5 ? 4 HELX_P HELX_P6 6 CYS A 76 ? GLY A 91 ? CYS A 615 GLY A 630 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ALA A 106 ? MET A 108 ? ALA A 645 MET A 647 AA 2 GLU A 115 ? ASP A 117 ? GLU A 654 ASP A 656 AB 1 VAL A 125 ? THR A 128 ? VAL A 664 THR A 667 AB 2 ARG A 131 ? VAL A 134 ? ARG A 670 VAL A 673 AB 3 GLU A 137 ? ARG A 141 ? GLU A 676 ARG A 680 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N PHE A 107 ? N PHE A 646 O TYR A 116 ? O TYR A 655 AB 1 2 N THR A 128 ? N THR A 667 O ARG A 131 ? O ARG A 670 AB 2 3 N VAL A 134 ? N VAL A 673 O GLU A 137 ? O GLU A 676 # _database_PDB_matrix.entry_id 4CHD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4CHD _atom_sites.fract_transf_matrix[1][1] 0.015272 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015272 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013373 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 540 ? ? ? A . n A 1 2 ALA 2 541 ? ? ? A . n A 1 3 MET 3 542 ? ? ? A . n A 1 4 ASP 4 543 ? ? ? A . n A 1 5 ILE 5 544 ? ? ? A . n A 1 6 TYR 6 545 ? ? ? A . n A 1 7 GLN 7 546 ? ? ? A . n A 1 8 ASP 8 547 547 ASP ASP A . n A 1 9 PRO 9 548 548 PRO PRO A . n A 1 10 PHE 10 549 549 PHE PHE A . n A 1 11 SER 11 550 550 SER SER A . n A 1 12 ARG 12 551 551 ARG ARG A . n A 1 13 ALA 13 552 552 ALA ALA A . n A 1 14 LYS 14 553 553 LYS LYS A . n A 1 15 SER 15 554 554 SER SER A . n A 1 16 LEU 16 555 555 LEU LEU A . n A 1 17 LEU 17 556 556 LEU LEU A . n A 1 18 LYS 18 557 557 LYS LYS A . n A 1 19 SER 19 558 558 SER SER A . n A 1 20 THR 20 559 559 THR THR A . n A 1 21 ILE 21 560 560 ILE ILE A . n A 1 22 LEU 22 561 561 LEU LEU A . n A 1 23 HIS 23 562 562 HIS HIS A . n A 1 24 ALA 24 563 563 ALA ALA A . n A 1 25 GLU 25 564 564 GLU GLU A . n A 1 26 ARG 26 565 565 ARG ARG A . n A 1 27 CYS 27 566 566 CYS CYS A . n A 1 28 LYS 28 567 567 LYS LYS A . n A 1 29 GLU 29 568 568 GLU GLU A . n A 1 30 PHE 30 569 569 PHE PHE A . n A 1 31 VAL 31 570 570 VAL VAL A . n A 1 32 GLY 32 571 571 GLY GLY A . n A 1 33 ASN 33 572 572 ASN ASN A . n A 1 34 MET 34 573 573 MET MET A . n A 1 35 LEU 35 574 574 LEU LEU A . n A 1 36 GLU 36 575 575 GLU GLU A . n A 1 37 GLU 37 576 576 GLU GLU A . n A 1 38 TYR 38 577 577 TYR TYR A . n A 1 39 GLN 39 578 578 GLN GLN A . n A 1 40 ASP 40 579 579 ASP ASP A . n A 1 41 PRO 41 580 580 PRO PRO A . n A 1 42 ALA 42 581 581 ALA ALA A . n A 1 43 GLU 43 582 582 GLU GLU A . n A 1 44 THR 44 583 583 THR THR A . n A 1 45 THR 45 584 584 THR THR A . n A 1 46 VAL 46 585 585 VAL VAL A . n A 1 47 GLN 47 586 586 GLN GLN A . n A 1 48 SER 48 587 587 SER SER A . n A 1 49 LEU 49 588 588 LEU LEU A . n A 1 50 VAL 50 589 589 VAL VAL A . n A 1 51 PRO 51 590 590 PRO PRO A . n A 1 52 ILE 52 591 591 ILE ILE A . n A 1 53 ASN 53 592 592 ASN ASN A . n A 1 54 THR 54 593 593 THR THR A . n A 1 55 TRP 55 594 594 TRP TRP A . n A 1 56 GLY 56 595 595 GLY GLY A . n A 1 57 LYS 57 596 596 LYS LYS A . n A 1 58 SER 58 597 597 SER SER A . n A 1 59 ALA 59 598 598 ALA ALA A . n A 1 60 LYS 60 599 599 LYS LYS A . n A 1 61 ARG 61 600 600 ARG ARG A . n A 1 62 LYS 62 601 601 LYS LYS A . n A 1 63 LEU 63 602 602 LEU LEU A . n A 1 64 GLN 64 603 603 GLN GLN A . n A 1 65 GLU 65 604 604 GLU GLU A . n A 1 66 GLU 66 605 605 GLU GLU A . n A 1 67 ILE 67 606 606 ILE ILE A . n A 1 68 THR 68 607 607 THR THR A . n A 1 69 SER 69 608 608 SER SER A . n A 1 70 ASP 70 609 609 ASP ASP A . n A 1 71 PRO 71 610 610 PRO PRO A . n A 1 72 ASP 72 611 611 ASP ASP A . n A 1 73 TRP 73 612 612 TRP TRP A . n A 1 74 HIS 74 613 613 HIS HIS A . n A 1 75 GLN 75 614 614 GLN GLN A . n A 1 76 CYS 76 615 615 CYS CYS A . n A 1 77 PRO 77 616 616 PRO PRO A . n A 1 78 ARG 78 617 617 ARG ARG A . n A 1 79 LYS 79 618 618 LYS LYS A . n A 1 80 ARG 80 619 619 ARG ARG A . n A 1 81 ALA 81 620 620 ALA ALA A . n A 1 82 LYS 82 621 621 LYS LYS A . n A 1 83 MET 83 622 622 MET MET A . n A 1 84 SER 84 623 623 SER SER A . n A 1 85 TYR 85 624 624 TYR TYR A . n A 1 86 LEU 86 625 625 LEU LEU A . n A 1 87 ALA 87 626 626 ALA ALA A . n A 1 88 ILE 88 627 627 ILE ILE A . n A 1 89 ILE 89 628 628 ILE ILE A . n A 1 90 ALA 90 629 629 ALA ALA A . n A 1 91 GLY 91 630 630 GLY GLY A . n A 1 92 SER 92 631 631 SER SER A . n A 1 93 ILE 93 632 632 ILE ILE A . n A 1 94 GLN 94 633 633 GLN GLN A . n A 1 95 ASP 95 634 634 ASP ASP A . n A 1 96 ARG 96 635 635 ARG ARG A . n A 1 97 ASP 97 636 636 ASP ASP A . n A 1 98 LYS 98 637 637 LYS LYS A . n A 1 99 LYS 99 638 638 LYS LYS A . n A 1 100 GLN 100 639 639 GLN GLN A . n A 1 101 THR 101 640 640 THR THR A . n A 1 102 ASN 102 641 641 ASN ASN A . n A 1 103 VAL 103 642 642 VAL VAL A . n A 1 104 PRO 104 643 643 PRO PRO A . n A 1 105 ARG 105 644 644 ARG ARG A . n A 1 106 ALA 106 645 645 ALA ALA A . n A 1 107 PHE 107 646 646 PHE PHE A . n A 1 108 MET 108 647 647 MET MET A . n A 1 109 LEU 109 648 648 LEU LEU A . n A 1 110 ARG 110 649 649 ARG ARG A . n A 1 111 GLY 111 650 650 GLY GLY A . n A 1 112 SER 112 651 651 SER SER A . n A 1 113 GLN 113 652 652 GLN GLN A . n A 1 114 ILE 114 653 653 ILE ILE A . n A 1 115 GLU 115 654 654 GLU GLU A . n A 1 116 TYR 116 655 655 TYR TYR A . n A 1 117 ASP 117 656 656 ASP ASP A . n A 1 118 MET 118 657 657 MET MET A . n A 1 119 LYS 119 658 658 LYS LYS A . n A 1 120 ALA 120 659 659 ALA ALA A . n A 1 121 THR 121 660 660 THR THR A . n A 1 122 ARG 122 661 661 ARG ARG A . n A 1 123 GLY 123 662 662 GLY GLY A . n A 1 124 LEU 124 663 663 LEU LEU A . n A 1 125 VAL 125 664 664 VAL VAL A . n A 1 126 VAL 126 665 665 VAL VAL A . n A 1 127 ASP 127 666 666 ASP ASP A . n A 1 128 THR 128 667 667 THR THR A . n A 1 129 THR 129 668 668 THR THR A . n A 1 130 ASN 130 669 669 ASN ASN A . n A 1 131 ARG 131 670 670 ARG ARG A . n A 1 132 ILE 132 671 671 ILE ILE A . n A 1 133 ILE 133 672 672 ILE ILE A . n A 1 134 VAL 134 673 673 VAL VAL A . n A 1 135 GLY 135 674 674 GLY GLY A . n A 1 136 GLY 136 675 675 GLY GLY A . n A 1 137 GLU 137 676 676 GLU GLU A . n A 1 138 THR 138 677 677 THR THR A . n A 1 139 VAL 139 678 678 VAL VAL A . n A 1 140 LEU 140 679 679 LEU LEU A . n A 1 141 ARG 141 680 680 ARG ARG A . n A 1 142 GLU 142 681 681 GLU GLU A . n A 1 143 GLY 143 682 ? ? ? A . n A 1 144 LYS 144 683 ? ? ? A . n A 1 145 GLY 145 684 ? ? ? A . n A 1 146 GLY 146 685 ? ? ? A . n A 1 147 PRO 147 686 ? ? ? A . n A 1 148 GLU 148 687 ? ? ? A . n A 1 149 GLY 149 688 ? ? ? A . n A 1 150 TYR 150 689 ? ? ? A . n A 1 151 VAL 151 690 ? ? ? A . n A 1 152 GLN 152 691 ? ? ? A . n A 1 153 THR 153 692 ? ? ? A . n A 1 154 GLY 154 693 ? ? ? A . n A 1 155 VAL 155 694 ? ? ? A . n A 1 156 PHE 156 695 ? ? ? A . n A 1 157 GLU 157 696 ? ? ? A . n A 1 158 GLU 158 697 ? ? ? A . n A 1 159 GLN 159 698 ? ? ? A . n A 1 160 PRO 160 699 ? ? ? A . n A 1 161 ARG 161 700 ? ? ? A . n A 1 162 CYS 162 701 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 2001 2001 HOH HOH A . B 2 HOH 2 2002 2002 HOH HOH A . B 2 HOH 3 2003 2003 HOH HOH A . B 2 HOH 4 2004 2004 HOH HOH A . B 2 HOH 5 2005 2005 HOH HOH A . B 2 HOH 6 2006 2006 HOH HOH A . B 2 HOH 7 2007 2007 HOH HOH A . B 2 HOH 8 2008 2008 HOH HOH A . B 2 HOH 9 2009 2009 HOH HOH A . B 2 HOH 10 2010 2010 HOH HOH A . B 2 HOH 11 2011 2011 HOH HOH A . B 2 HOH 12 2012 2012 HOH HOH A . B 2 HOH 13 2013 2013 HOH HOH A . B 2 HOH 14 2014 2014 HOH HOH A . B 2 HOH 15 2015 2015 HOH HOH A . B 2 HOH 16 2016 2016 HOH HOH A . B 2 HOH 17 2017 2017 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2014-02-05 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 18.0095 21.9808 14.1620 0.0829 0.2837 0.1201 -0.0465 -0.0041 0.0252 4.4500 11.2047 7.2048 -3.1279 -0.9433 -1.3676 -0.2106 -0.1068 -0.2697 0.2335 -0.0746 -0.5828 0.0160 0.7065 0.2852 'X-RAY DIFFRACTION' 2 ? refined 7.5147 23.7204 19.5117 0.1912 0.1690 0.0368 0.0188 -0.0084 0.0432 9.2941 5.1207 4.4701 -0.2299 -1.9753 0.1201 -0.1288 -0.5147 0.1827 0.3124 0.0016 -0.0720 -0.3857 0.0091 0.1271 'X-RAY DIFFRACTION' 3 ? refined 15.5147 10.5996 23.0517 0.2867 0.3272 0.2568 0.1206 0.0397 0.1102 14.8770 7.0585 8.4513 -1.8005 1.7350 -2.4540 -0.0757 -0.9868 -0.8054 0.6067 0.0570 -0.4276 0.6949 0.6310 0.0187 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 547 ? ? A 581 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 582 ? ? A 644 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 645 ? ? A 681 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.7.0029 ? 1 XDS 'data reduction' . ? 2 XSCALE 'data scaling' . ? 3 SHARP phasing . ? 4 # _pdbx_entry_details.entry_id 4CHD _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'EXTRA GAM AT N-TERMINUS AFTER HIS-TAG CLEAVAGE' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 576 ? ? 43.90 71.34 2 1 GLN A 652 ? ? -102.02 42.11 3 1 THR A 668 ? ? -59.80 5.71 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 681 ? CG ? A GLU 142 CG 2 1 Y 1 A GLU 681 ? CD ? A GLU 142 CD 3 1 Y 1 A GLU 681 ? OE1 ? A GLU 142 OE1 4 1 Y 1 A GLU 681 ? OE2 ? A GLU 142 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 540 ? A GLY 1 2 1 Y 1 A ALA 541 ? A ALA 2 3 1 Y 1 A MET 542 ? A MET 3 4 1 Y 1 A ASP 543 ? A ASP 4 5 1 Y 1 A ILE 544 ? A ILE 5 6 1 Y 1 A TYR 545 ? A TYR 6 7 1 Y 1 A GLN 546 ? A GLN 7 8 1 Y 1 A GLY 682 ? A GLY 143 9 1 Y 1 A LYS 683 ? A LYS 144 10 1 Y 1 A GLY 684 ? A GLY 145 11 1 Y 1 A GLY 685 ? A GLY 146 12 1 Y 1 A PRO 686 ? A PRO 147 13 1 Y 1 A GLU 687 ? A GLU 148 14 1 Y 1 A GLY 688 ? A GLY 149 15 1 Y 1 A TYR 689 ? A TYR 150 16 1 Y 1 A VAL 690 ? A VAL 151 17 1 Y 1 A GLN 691 ? A GLN 152 18 1 Y 1 A THR 692 ? A THR 153 19 1 Y 1 A GLY 693 ? A GLY 154 20 1 Y 1 A VAL 694 ? A VAL 155 21 1 Y 1 A PHE 695 ? A PHE 156 22 1 Y 1 A GLU 696 ? A GLU 157 23 1 Y 1 A GLU 697 ? A GLU 158 24 1 Y 1 A GLN 698 ? A GLN 159 25 1 Y 1 A PRO 699 ? A PRO 160 26 1 Y 1 A ARG 700 ? A ARG 161 27 1 Y 1 A CYS 701 ? A CYS 162 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #