HEADER TRANSCRIPTION 06-DEC-13 4CIC TITLE T. POTENS ISCR COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATOR, BADM/RRF2 FAMILY; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ISCR; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: HEXA-ALANINE PEPTIDE; COMPND 9 CHAIN: Q; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMINCOLA POTENS; SOURCE 3 ORGANISM_TAXID: 635013; SOURCE 4 STRAIN: JR; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETZ2_1A; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630 KEYWDS TRANSCRIPTION, TRANSCRIPTION REGULATION, DNA RECOGNITION, HELIX-TURN- KEYWDS 2 HELIX MOTIF, RRF2-LIKE REGULATOR EXPDTA X-RAY DIFFRACTION AUTHOR J.A.SANTOS,S.MACEDO-RIBEIRO,P.J.B.PEREIRA REVDAT 4 08-MAY-24 4CIC 1 REMARK LINK REVDAT 3 25-JUN-14 4CIC 1 JRNL REVDAT 2 04-JUN-14 4CIC 1 JRNL REVDAT 1 28-MAY-14 4CIC 0 JRNL AUTH J.A.SANTOS,N.ALONSO-GARCIA,S.MACEDO-RIBEIRO,P.J.B.PEREIRA JRNL TITL THE UNIQUE REGULATION OF IRON-SULFUR CLUSTER BIOGENESIS IN A JRNL TITL 2 GRAM-POSITIVE BACTERIUM. JRNL REF PROC.NATL.ACAD.SCI.USA V. 111 E2251 2014 JRNL REFN ISSN 0027-8424 JRNL PMID 24847070 JRNL DOI 10.1073/PNAS.1322728111 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 43615 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.500 REMARK 3 FREE R VALUE TEST SET COUNT : 1973 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.8396 - 3.8568 0.99 3007 142 0.1867 0.1807 REMARK 3 2 3.8568 - 3.0614 1.00 3004 142 0.1807 0.2119 REMARK 3 3 3.0614 - 2.6744 1.00 2975 143 0.2157 0.2162 REMARK 3 4 2.6744 - 2.4299 1.00 2988 142 0.2100 0.2389 REMARK 3 5 2.4299 - 2.2558 1.00 3003 145 0.1956 0.2074 REMARK 3 6 2.2558 - 2.1228 1.00 2970 139 0.1799 0.2107 REMARK 3 7 2.1228 - 2.0165 1.00 3021 137 0.2003 0.2524 REMARK 3 8 2.0165 - 1.9287 1.00 2944 139 0.2102 0.2473 REMARK 3 9 1.9287 - 1.8544 1.00 2955 141 0.2250 0.2783 REMARK 3 10 1.8544 - 1.7904 1.00 2992 142 0.2410 0.2881 REMARK 3 11 1.7904 - 1.7344 1.00 2946 141 0.2702 0.2812 REMARK 3 12 1.7344 - 1.6849 1.00 2991 138 0.2729 0.3776 REMARK 3 13 1.6849 - 1.6405 0.99 2971 146 0.3120 0.3719 REMARK 3 14 1.6405 - 1.6005 0.97 2875 136 0.3464 0.3549 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.410 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.44 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2249 REMARK 3 ANGLE : 1.092 3031 REMARK 3 CHIRALITY : 0.076 346 REMARK 3 PLANARITY : 0.005 382 REMARK 3 DIHEDRAL : 15.339 847 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 19 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID -3 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): 70.7565 59.6884 14.8134 REMARK 3 T TENSOR REMARK 3 T11: 0.1855 T22: 0.2236 REMARK 3 T33: 0.1729 T12: 0.0273 REMARK 3 T13: -0.0034 T23: 0.0181 REMARK 3 L TENSOR REMARK 3 L11: 0.8733 L22: 1.7037 REMARK 3 L33: 0.8027 L12: 0.1202 REMARK 3 L13: -0.0741 L23: 0.4371 REMARK 3 S TENSOR REMARK 3 S11: 0.0127 S12: 0.0194 S13: 0.0107 REMARK 3 S21: 0.1401 S22: 0.1743 S23: -0.0033 REMARK 3 S31: 0.1830 S32: -0.2348 S33: -0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 21 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): 68.7810 61.4332 0.9360 REMARK 3 T TENSOR REMARK 3 T11: 0.1778 T22: 0.2771 REMARK 3 T33: 0.2569 T12: 0.0111 REMARK 3 T13: 0.0147 T23: -0.0272 REMARK 3 L TENSOR REMARK 3 L11: 0.4730 L22: 0.6321 REMARK 3 L33: 0.3198 L12: 0.1488 REMARK 3 L13: 0.2475 L23: 0.3854 REMARK 3 S TENSOR REMARK 3 S11: 0.0770 S12: 0.0155 S13: -0.1006 REMARK 3 S21: -0.2536 S22: -0.1665 S23: 0.1774 REMARK 3 S31: 0.2203 S32: -0.0756 S33: -0.0030 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 39 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 71.4198 71.2443 7.9533 REMARK 3 T TENSOR REMARK 3 T11: 0.2314 T22: 0.1910 REMARK 3 T33: 0.2738 T12: 0.0039 REMARK 3 T13: 0.0299 T23: -0.0122 REMARK 3 L TENSOR REMARK 3 L11: 0.1466 L22: 0.0587 REMARK 3 L33: 0.8372 L12: -0.0462 REMARK 3 L13: -0.0935 L23: -0.1561 REMARK 3 S TENSOR REMARK 3 S11: 0.0107 S12: 0.5295 S13: -0.4018 REMARK 3 S21: -0.0966 S22: 0.0842 S23: -0.1531 REMARK 3 S31: -0.4364 S32: -0.3844 S33: 0.0116 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 52 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 80.1667 68.4825 2.3218 REMARK 3 T TENSOR REMARK 3 T11: 0.2485 T22: 0.2722 REMARK 3 T33: 0.3034 T12: -0.0405 REMARK 3 T13: 0.0837 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 0.5678 L22: 1.0163 REMARK 3 L33: 0.2490 L12: -0.6372 REMARK 3 L13: -0.0736 L23: 0.3976 REMARK 3 S TENSOR REMARK 3 S11: 0.1300 S12: 0.3440 S13: 0.1445 REMARK 3 S21: -0.4354 S22: -0.0750 S23: -0.4644 REMARK 3 S31: -0.3389 S32: 0.3429 S33: 0.0315 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESID 59 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 80.8619 63.4738 5.8808 REMARK 3 T TENSOR REMARK 3 T11: 0.1502 T22: 0.2401 REMARK 3 T33: 0.2024 T12: -0.0175 REMARK 3 T13: 0.0644 T23: -0.0210 REMARK 3 L TENSOR REMARK 3 L11: 0.8180 L22: 2.3096 REMARK 3 L33: 1.2053 L12: 0.2045 REMARK 3 L13: -0.2803 L23: 0.4027 REMARK 3 S TENSOR REMARK 3 S11: 0.0394 S12: -0.0705 S13: 0.1590 REMARK 3 S21: -0.1556 S22: 0.1115 S23: -0.4065 REMARK 3 S31: -0.2129 S32: 0.3860 S33: 0.0479 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESID 84 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 84.0469 72.5729 40.8803 REMARK 3 T TENSOR REMARK 3 T11: 0.3898 T22: 0.1877 REMARK 3 T33: 0.2405 T12: -0.0564 REMARK 3 T13: -0.0161 T23: -0.0613 REMARK 3 L TENSOR REMARK 3 L11: 1.1536 L22: 0.9419 REMARK 3 L33: 0.9395 L12: 0.7555 REMARK 3 L13: 0.3027 L23: 0.1490 REMARK 3 S TENSOR REMARK 3 S11: 0.3031 S12: -0.4219 S13: 0.0104 REMARK 3 S21: -0.1387 S22: -0.1921 S23: 0.1409 REMARK 3 S31: -0.2770 S32: -0.9457 S33: 0.0671 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN A AND (RESID 108 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 82.2839 59.4917 31.8546 REMARK 3 T TENSOR REMARK 3 T11: 0.2222 T22: 0.2958 REMARK 3 T33: 0.1898 T12: 0.0360 REMARK 3 T13: -0.0058 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: -0.0059 L22: 0.2444 REMARK 3 L33: 2.5202 L12: 0.3278 REMARK 3 L13: 0.5126 L23: 0.5314 REMARK 3 S TENSOR REMARK 3 S11: -0.0658 S12: -0.1171 S13: -0.0185 REMARK 3 S21: 0.0514 S22: 0.1899 S23: -0.0542 REMARK 3 S31: 0.0465 S32: 1.8039 S33: -0.0102 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN A AND (RESID 126 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 78.9609 49.1995 9.8042 REMARK 3 T TENSOR REMARK 3 T11: 0.3215 T22: 0.2466 REMARK 3 T33: 0.2095 T12: -0.0184 REMARK 3 T13: 0.0484 T23: -0.0433 REMARK 3 L TENSOR REMARK 3 L11: 0.6059 L22: 0.4276 REMARK 3 L33: 0.2172 L12: -0.7795 REMARK 3 L13: -0.2922 L23: 0.2424 REMARK 3 S TENSOR REMARK 3 S11: -0.1408 S12: 0.1162 S13: -0.2037 REMARK 3 S21: 0.3542 S22: -0.0213 S23: 0.1707 REMARK 3 S31: 0.8276 S32: -0.0074 S33: -0.0140 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN A AND (RESID 140 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 70.2423 38.3407 4.8678 REMARK 3 T TENSOR REMARK 3 T11: 1.0420 T22: 0.8313 REMARK 3 T33: 0.6663 T12: 0.2022 REMARK 3 T13: -0.1459 T23: -0.1116 REMARK 3 L TENSOR REMARK 3 L11: 1.6677 L22: 1.4465 REMARK 3 L33: 0.1676 L12: 0.5830 REMARK 3 L13: 0.5194 L23: 0.2459 REMARK 3 S TENSOR REMARK 3 S11: 1.0688 S12: -0.1462 S13: -1.1606 REMARK 3 S21: 0.3637 S22: 0.6920 S23: 0.3611 REMARK 3 S31: -0.7171 S32: 0.0453 S33: 0.0347 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN A AND (RESID 145 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 70.8081 28.6124 7.1152 REMARK 3 T TENSOR REMARK 3 T11: 0.6421 T22: 0.8525 REMARK 3 T33: 1.2364 T12: 0.0210 REMARK 3 T13: 0.0716 T23: 0.0602 REMARK 3 L TENSOR REMARK 3 L11: 0.0420 L22: 0.0561 REMARK 3 L33: 0.0464 L12: -0.0325 REMARK 3 L13: 0.0526 L23: 0.0013 REMARK 3 S TENSOR REMARK 3 S11: -1.6081 S12: -0.2752 S13: -1.6776 REMARK 3 S21: -0.7407 S22: -1.0445 S23: -0.5706 REMARK 3 S31: 0.4069 S32: -1.4886 S33: 0.0035 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN B AND (RESID -3 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): 74.5119 63.0519 41.7615 REMARK 3 T TENSOR REMARK 3 T11: 0.2225 T22: 0.1860 REMARK 3 T33: 0.1733 T12: 0.0016 REMARK 3 T13: 0.0015 T23: 0.0066 REMARK 3 L TENSOR REMARK 3 L11: 1.1040 L22: 1.3050 REMARK 3 L33: 0.6350 L12: -0.5354 REMARK 3 L13: -0.2875 L23: -0.1421 REMARK 3 S TENSOR REMARK 3 S11: 0.1490 S12: 0.0411 S13: 0.0052 REMARK 3 S21: 0.0501 S22: -0.0048 S23: -0.0347 REMARK 3 S31: -0.3958 S32: 0.0096 S33: -0.0004 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN B AND (RESID 21 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): 72.5080 65.1642 55.5454 REMARK 3 T TENSOR REMARK 3 T11: 0.2821 T22: 0.2057 REMARK 3 T33: 0.2457 T12: -0.0044 REMARK 3 T13: -0.0222 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.3109 L22: 0.3817 REMARK 3 L33: 0.6408 L12: 0.0412 REMARK 3 L13: 0.5357 L23: 0.4975 REMARK 3 S TENSOR REMARK 3 S11: -0.1533 S12: -0.2984 S13: 0.1317 REMARK 3 S21: 0.0225 S22: 0.0450 S23: 0.0388 REMARK 3 S31: -0.1091 S32: 0.2261 S33: -0.0179 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN B AND (RESID 39 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.6695 62.5135 48.5001 REMARK 3 T TENSOR REMARK 3 T11: 0.2045 T22: 0.2150 REMARK 3 T33: 0.2987 T12: 0.0092 REMARK 3 T13: -0.0112 T23: 0.0376 REMARK 3 L TENSOR REMARK 3 L11: -0.0321 L22: 0.3506 REMARK 3 L33: 0.8704 L12: 0.0171 REMARK 3 L13: -0.1067 L23: -0.2931 REMARK 3 S TENSOR REMARK 3 S11: 0.0349 S12: -0.1975 S13: -0.2274 REMARK 3 S21: 0.7976 S22: 0.0445 S23: -0.3802 REMARK 3 S31: -0.4439 S32: -0.4325 S33: 0.0063 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN B AND (RESID 52 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 69.4330 53.3110 51.3718 REMARK 3 T TENSOR REMARK 3 T11: 0.2523 T22: 0.1552 REMARK 3 T33: 0.2300 T12: -0.0229 REMARK 3 T13: -0.0256 T23: 0.0589 REMARK 3 L TENSOR REMARK 3 L11: 2.9036 L22: 1.2230 REMARK 3 L33: 1.1864 L12: 0.0522 REMARK 3 L13: 1.1223 L23: -0.3058 REMARK 3 S TENSOR REMARK 3 S11: 0.0431 S12: -0.2016 S13: -0.3750 REMARK 3 S21: 0.0863 S22: -0.0026 S23: 0.1923 REMARK 3 S31: 0.3884 S32: -0.2527 S33: 0.0000 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN B AND (RESID 84 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.1262 49.7910 15.3580 REMARK 3 T TENSOR REMARK 3 T11: 0.3073 T22: 0.3763 REMARK 3 T33: 0.2329 T12: 0.0229 REMARK 3 T13: -0.0812 T23: 0.0294 REMARK 3 L TENSOR REMARK 3 L11: 0.5119 L22: 0.5865 REMARK 3 L33: 0.0302 L12: 0.6687 REMARK 3 L13: -0.2016 L23: -0.1948 REMARK 3 S TENSOR REMARK 3 S11: -0.5580 S12: -0.3009 S13: -0.4688 REMARK 3 S21: -0.2570 S22: 0.4862 S23: -0.0370 REMARK 3 S31: -0.6994 S32: -0.3029 S33: -0.0334 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN B AND (RESID 108 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 74.4268 51.6868 24.5295 REMARK 3 T TENSOR REMARK 3 T11: 0.2561 T22: 0.2017 REMARK 3 T33: 0.1995 T12: 0.0380 REMARK 3 T13: 0.0091 T23: -0.0187 REMARK 3 L TENSOR REMARK 3 L11: 0.5582 L22: -0.0743 REMARK 3 L33: 4.7885 L12: 0.3024 REMARK 3 L13: 0.7242 L23: 0.3139 REMARK 3 S TENSOR REMARK 3 S11: 0.1223 S12: 0.1281 S13: -0.0892 REMARK 3 S21: -0.0501 S22: -0.0308 S23: 0.0066 REMARK 3 S31: 1.8157 S32: 0.4013 S33: -0.0110 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN B AND (RESID 126 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 84.7698 54.9953 46.7009 REMARK 3 T TENSOR REMARK 3 T11: 0.2233 T22: 0.3350 REMARK 3 T33: 0.2098 T12: -0.0037 REMARK 3 T13: -0.0304 T23: 0.0148 REMARK 3 L TENSOR REMARK 3 L11: 0.4757 L22: 0.5677 REMARK 3 L33: 0.2895 L12: -0.8062 REMARK 3 L13: 0.1805 L23: -0.0841 REMARK 3 S TENSOR REMARK 3 S11: 0.0041 S12: 0.3706 S13: 0.1289 REMARK 3 S21: 0.0543 S22: 0.0402 S23: -0.1927 REMARK 3 S31: 0.1541 S32: 0.9797 S33: -0.0013 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN B AND (RESID 140 THROUGH 148 ) REMARK 3 ORIGIN FOR THE GROUP (A): 100.9882 63.6615 50.9184 REMARK 3 T TENSOR REMARK 3 T11: 0.5911 T22: 0.7242 REMARK 3 T33: 1.0074 T12: -0.0061 REMARK 3 T13: -0.0890 T23: 0.1615 REMARK 3 L TENSOR REMARK 3 L11: 3.1538 L22: 4.1510 REMARK 3 L33: 0.4404 L12: 3.2126 REMARK 3 L13: 0.5509 L23: -0.3528 REMARK 3 S TENSOR REMARK 3 S11: 0.5261 S12: -0.7109 S13: -0.0404 REMARK 3 S21: 0.3692 S22: -1.1437 S23: -2.7890 REMARK 3 S31: -0.0980 S32: -0.4158 S33: -0.2301 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN Q AND (RESID 10 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 71.1590 63.5416 28.0427 REMARK 3 T TENSOR REMARK 3 T11: 0.4002 T22: 0.3612 REMARK 3 T33: 0.2717 T12: -0.0200 REMARK 3 T13: -0.0081 T23: -0.0572 REMARK 3 L TENSOR REMARK 3 L11: 0.8823 L22: 0.9387 REMARK 3 L33: 2.1276 L12: -0.7361 REMARK 3 L13: 0.9999 L23: -1.4165 REMARK 3 S TENSOR REMARK 3 S11: 0.7525 S12: -0.8808 S13: 1.3432 REMARK 3 S21: -0.0482 S22: 0.2153 S23: 1.2492 REMARK 3 S31: -0.0159 S32: -0.4256 S33: 0.2225 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4CIC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1290059182. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43750 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 53.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 1.30000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PH 6.5 3M NACL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.19100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 29.59550 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 88.78650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 86 REMARK 465 ILE A 87 REMARK 465 ALA A 88 REMARK 465 PRO A 89 REMARK 465 VAL A 90 REMARK 465 GLU A 91 REMARK 465 SER A 92 REMARK 465 VAL A 93 REMARK 465 SER A 94 REMARK 465 GLN A 95 REMARK 465 ASP A 96 REMARK 465 ASP A 97 REMARK 465 PRO A 98 REMARK 465 GLU A 99 REMARK 465 HIS A 100 REMARK 465 PRO B 86 REMARK 465 ILE B 87 REMARK 465 ALA B 88 REMARK 465 PRO B 89 REMARK 465 VAL B 90 REMARK 465 GLU B 91 REMARK 465 SER B 92 REMARK 465 VAL B 93 REMARK 465 SER B 94 REMARK 465 GLN B 95 REMARK 465 ASP B 96 REMARK 465 ASP B 97 REMARK 465 PRO B 98 REMARK 465 GLU B 99 REMARK 465 HIS B 100 REMARK 465 ILE B 149 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA B -2 -66.22 -93.38 REMARK 500 ALA B 61 -56.11 -129.65 REMARK 500 GLN B 140 55.68 -115.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1150 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 81 O REMARK 620 2 VAL A 82 O 82.9 REMARK 620 3 GLU A 84 O 89.3 100.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B1149 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG B 81 O REMARK 620 2 VAL B 82 O 83.2 REMARK 620 3 GLU B 84 O 87.7 99.8 REMARK 620 4 LEU B 102 O 175.3 92.4 94.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1150 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 1149 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4CHU RELATED DB: PDB REMARK 900 E. COLI ISCR-DNA COMPLEX REMARK 999 REMARK 999 SEQUENCE REMARK 999 STARTING MET RESIDUE REPLACED BY GAMGL DURING CLONING REMARK 999 PROCEDURE. MUTATIONS C92S C101S C107S. DBREF 4CIC A 2 149 UNP D5X843 D5X843_THEPJ 2 149 DBREF 4CIC B 2 149 UNP D5X843 D5X843_THEPJ 2 149 DBREF 4CIC Q 10 15 PDB 4CIC 4CIC 10 15 SEQADV 4CIC GLY A -3 UNP D5X843 EXPRESSION TAG SEQADV 4CIC ALA A -2 UNP D5X843 EXPRESSION TAG SEQADV 4CIC MET A -1 UNP D5X843 EXPRESSION TAG SEQADV 4CIC GLY A 0 UNP D5X843 EXPRESSION TAG SEQADV 4CIC LEU A 1 UNP D5X843 EXPRESSION TAG SEQADV 4CIC SER A 92 UNP D5X843 CYS 92 ENGINEERED MUTATION SEQADV 4CIC SER A 101 UNP D5X843 CYS 101 ENGINEERED MUTATION SEQADV 4CIC SER A 107 UNP D5X843 CYS 107 ENGINEERED MUTATION SEQADV 4CIC GLY B -3 UNP D5X843 EXPRESSION TAG SEQADV 4CIC ALA B -2 UNP D5X843 EXPRESSION TAG SEQADV 4CIC MET B -1 UNP D5X843 EXPRESSION TAG SEQADV 4CIC GLY B 0 UNP D5X843 EXPRESSION TAG SEQADV 4CIC LEU B 1 UNP D5X843 EXPRESSION TAG SEQADV 4CIC SER B 92 UNP D5X843 CYS 92 ENGINEERED MUTATION SEQADV 4CIC SER B 101 UNP D5X843 CYS 101 ENGINEERED MUTATION SEQADV 4CIC SER B 107 UNP D5X843 CYS 107 ENGINEERED MUTATION SEQRES 1 A 153 GLY ALA MET GLY LEU LYS VAL SER THR LYS GLY HIS TYR SEQRES 2 A 153 GLY VAL GLN ALA MET PHE ASP LEU ALA GLN HIS PHE GLY SEQRES 3 A 153 GLU GLY PRO VAL SER LEU LYS SER ILE ALA GLU ARG GLN SEQRES 4 A 153 GLY LEU SER GLU PRO TYR LEU GLU GLN LEU ILE ALA VAL SEQRES 5 A 153 LEU ARG LYS ALA GLY LEU VAL LYS SER VAL ARG GLY ALA SEQRES 6 A 153 GLN GLY GLY TYR ILE LEU ALA ARG GLU PRO ARG ASP ILE SEQRES 7 A 153 LYS VAL GLY ASP ILE ILE ARG VAL LEU GLU GLY PRO ILE SEQRES 8 A 153 ALA PRO VAL GLU SER VAL SER GLN ASP ASP PRO GLU HIS SEQRES 9 A 153 SER LEU LYS PHE ASP PHE SER VAL THR LYS SER VAL TRP SEQRES 10 A 153 GLU LYS VAL LYS LYS SER ILE GLU GLU VAL LEU ASP SER SEQRES 11 A 153 ILE THR LEU ALA ASP MET LEU LYS ASP ALA GLU GLU ALA SEQRES 12 A 153 GLN MET ALA GLN GLY TYR MET TYR TYR ILE SEQRES 1 B 153 GLY ALA MET GLY LEU LYS VAL SER THR LYS GLY HIS TYR SEQRES 2 B 153 GLY VAL GLN ALA MET PHE ASP LEU ALA GLN HIS PHE GLY SEQRES 3 B 153 GLU GLY PRO VAL SER LEU LYS SER ILE ALA GLU ARG GLN SEQRES 4 B 153 GLY LEU SER GLU PRO TYR LEU GLU GLN LEU ILE ALA VAL SEQRES 5 B 153 LEU ARG LYS ALA GLY LEU VAL LYS SER VAL ARG GLY ALA SEQRES 6 B 153 GLN GLY GLY TYR ILE LEU ALA ARG GLU PRO ARG ASP ILE SEQRES 7 B 153 LYS VAL GLY ASP ILE ILE ARG VAL LEU GLU GLY PRO ILE SEQRES 8 B 153 ALA PRO VAL GLU SER VAL SER GLN ASP ASP PRO GLU HIS SEQRES 9 B 153 SER LEU LYS PHE ASP PHE SER VAL THR LYS SER VAL TRP SEQRES 10 B 153 GLU LYS VAL LYS LYS SER ILE GLU GLU VAL LEU ASP SER SEQRES 11 B 153 ILE THR LEU ALA ASP MET LEU LYS ASP ALA GLU GLU ALA SEQRES 12 B 153 GLN MET ALA GLN GLY TYR MET TYR TYR ILE SEQRES 1 Q 6 ALA ALA ALA ALA ALA ALA HET NA A1150 1 HET NA B1149 1 HETNAM NA SODIUM ION FORMUL 4 NA 2(NA 1+) FORMUL 6 HOH *156(H2 O) HELIX 1 1 SER A 4 HIS A 20 1 17 HELIX 2 2 SER A 27 GLY A 36 1 10 HELIX 3 3 SER A 38 ALA A 52 1 15 HELIX 4 4 GLU A 70 ILE A 74 5 5 HELIX 5 5 LYS A 75 GLU A 84 1 10 HELIX 6 6 SER A 107 SER A 126 1 20 HELIX 7 7 THR A 128 GLN A 140 1 13 HELIX 8 8 GLY A 144 TYR A 148 5 5 HELIX 9 9 SER B 4 PHE B 21 1 18 HELIX 10 10 SER B 27 GLY B 36 1 10 HELIX 11 11 SER B 38 ALA B 52 1 15 HELIX 12 12 GLU B 70 ILE B 74 5 5 HELIX 13 13 LYS B 75 GLU B 84 1 10 HELIX 14 14 SER B 107 SER B 126 1 20 HELIX 15 15 THR B 128 GLN B 140 1 13 HELIX 16 16 GLY B 144 TYR B 148 5 5 SHEET 1 AA 3 LYS A 2 VAL A 3 0 SHEET 2 AA 3 ALA Q 12 ALA Q 14 -1 O ALA Q 13 N LYS A 2 SHEET 3 AA 3 LEU B 1 VAL B 3 1 O LYS B 2 N ALA Q 14 SHEET 1 AB 2 VAL A 55 VAL A 58 0 SHEET 2 AB 2 GLY A 64 LEU A 67 -1 O GLY A 64 N VAL A 58 SHEET 1 BA 2 VAL B 55 VAL B 58 0 SHEET 2 BA 2 GLY B 64 LEU B 67 -1 O GLY B 64 N VAL B 58 LINK O ARG A 81 NA NA A1150 1555 1555 2.53 LINK O VAL A 82 NA NA A1150 1555 1555 2.49 LINK O GLU A 84 NA NA A1150 1555 1555 2.21 LINK O ARG B 81 NA NA B1149 1555 1555 2.58 LINK O VAL B 82 NA NA B1149 1555 1555 2.48 LINK O GLU B 84 NA NA B1149 1555 1555 2.18 LINK O LEU B 102 NA NA B1149 3755 1555 2.41 CISPEP 1 ALA Q 14 ALA Q 15 0 1.08 SITE 1 AC1 3 ARG A 81 VAL A 82 GLU A 84 SITE 1 AC2 4 ARG B 81 VAL B 82 GLU B 84 LEU B 102 CRYST1 53.585 53.585 118.382 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018662 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018662 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008447 0.00000 MTRIX1 1 0.000368 -1.000000 -0.000149 133.94650 1 MTRIX2 1 -1.000000 -0.000368 -0.000304 133.99260 1 MTRIX3 1 0.000304 0.000149 -1.000000 56.44150 1