HEADER HYDROLASE 15-DEC-13 4CIS TITLE STRUCTURE OF MUTM IN COMPLEX WITH CARBOCYCLIC 8-OXO-G CONTAINING DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: FORMAMIDOPYRIMIDIN DNA GLYCOSYLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: FAPY-DNA GLYCOSYLASE, DNA-(APURINIC OR APYRIMIDINIC SITE) COMPND 5 LYASE MUTM, FORMAMIDOPYRIMIDIN DNA GLYCOSYLASE; COMPND 6 EC: 3.2.2.23; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA; COMPND 10 CHAIN: C; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA; COMPND 14 CHAIN: D; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOCOCCUS LACTIS SUBSP. CREMORIS; SOURCE 3 ORGANISM_TAXID: 1359; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: PPSG-IBA3; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 10 ORGANISM_TAXID: 32630; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630 KEYWDS HYDROLASE, BASE EXCISION REPAIR, DNA REPAIR EXPDTA X-RAY DIFFRACTION AUTHOR S.SCHNEIDER,K.SADEGHIAN,D.FLAIG,I.D.BLANK,R.STRASSER,D.STATHIS, AUTHOR 2 M.WINNACKER,T.CARELL,C.OCHSENFELD REVDAT 5 20-DEC-23 4CIS 1 REMARK LINK REVDAT 4 07-MAR-18 4CIS 1 SOURCE JRNL ATOM REVDAT 3 17-SEP-14 4CIS 1 JRNL REVDAT 2 06-AUG-14 4CIS 1 JRNL REVDAT 1 04-JUN-14 4CIS 0 JRNL AUTH K.SADEGHIAN,D.FLAIG,I.D.BLANK,S.SCHNEIDER,R.STRASSER, JRNL AUTH 2 D.STATHIS,M.WINNACKER,T.CARELL,C.OCHSENFELD JRNL TITL RIBOSE-PROTONATED DNA BASE EXCISION REPAIR: A COMBINED JRNL TITL 2 THEORETICAL AND EXPERIMENTAL STUDY. JRNL REF ANGEW. CHEM. INT. ED. ENGL. V. 53 10044 2014 JRNL REFN ESSN 1521-3773 JRNL PMID 25065673 JRNL DOI 10.1002/ANIE.201403334 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 39352 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2103 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2793 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.02 REMARK 3 BIN R VALUE (WORKING SET) : 0.3510 REMARK 3 BIN FREE R VALUE SET COUNT : 137 REMARK 3 BIN FREE R VALUE : 0.3710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4287 REMARK 3 NUCLEIC ACID ATOMS : 569 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 135 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.23000 REMARK 3 B22 (A**2) : -1.52000 REMARK 3 B33 (A**2) : 0.29000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.227 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.178 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.136 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.912 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5012 ; 0.017 ; 0.018 REMARK 3 BOND LENGTHS OTHERS (A): 4727 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6841 ; 1.821 ; 1.881 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10938 ; 1.288 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 526 ; 5.778 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 193 ;37.243 ;23.886 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 882 ;15.257 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;16.598 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 734 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5092 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1079 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2116 ; 0.824 ; 1.333 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2115 ; 0.823 ; 1.333 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2638 ; 1.176 ; 1.995 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2896 ; 1.230 ; 1.478 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 28 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 11 REMARK 3 ORIGIN FOR THE GROUP (A): 0.4798 -15.8311 59.4580 REMARK 3 T TENSOR REMARK 3 T11: 0.0333 T22: 0.0254 REMARK 3 T33: 0.0659 T12: -0.0088 REMARK 3 T13: 0.0058 T23: 0.0316 REMARK 3 L TENSOR REMARK 3 L11: 1.8216 L22: 10.9669 REMARK 3 L33: 10.3714 L12: 2.9147 REMARK 3 L13: 4.2192 L23: 4.8533 REMARK 3 S TENSOR REMARK 3 S11: -0.0364 S12: 0.0731 S13: 0.0300 REMARK 3 S21: 0.3053 S22: -0.0304 S23: 0.1945 REMARK 3 S31: -0.1942 S32: 0.2367 S33: 0.0668 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 12 A 29 REMARK 3 ORIGIN FOR THE GROUP (A): 3.0696 0.9529 59.4550 REMARK 3 T TENSOR REMARK 3 T11: 0.1449 T22: 0.0750 REMARK 3 T33: 0.0873 T12: -0.0205 REMARK 3 T13: -0.0176 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 2.3602 L22: 2.4361 REMARK 3 L33: 9.0203 L12: 0.5322 REMARK 3 L13: -0.9916 L23: -0.8273 REMARK 3 S TENSOR REMARK 3 S11: 0.0348 S12: -0.1866 S13: -0.0233 REMARK 3 S21: 0.3366 S22: -0.0652 S23: -0.1124 REMARK 3 S31: 0.0575 S32: 0.4318 S33: 0.0304 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 30 A 37 REMARK 3 ORIGIN FOR THE GROUP (A): -1.2733 0.7149 43.5359 REMARK 3 T TENSOR REMARK 3 T11: 0.1301 T22: 0.0855 REMARK 3 T33: 0.0407 T12: -0.0222 REMARK 3 T13: -0.0371 T23: 0.0476 REMARK 3 L TENSOR REMARK 3 L11: 13.8694 L22: 15.5236 REMARK 3 L33: 0.1042 L12: 4.0793 REMARK 3 L13: 0.9230 L23: 1.0485 REMARK 3 S TENSOR REMARK 3 S11: -0.1130 S12: 0.7534 S13: 0.1935 REMARK 3 S21: -0.7451 S22: 0.0908 S23: -0.0935 REMARK 3 S31: -0.0541 S32: 0.0451 S33: 0.0223 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 38 A 62 REMARK 3 ORIGIN FOR THE GROUP (A): -5.4796 -1.1418 56.1480 REMARK 3 T TENSOR REMARK 3 T11: 0.0886 T22: 0.0478 REMARK 3 T33: 0.1538 T12: 0.0367 REMARK 3 T13: 0.0445 T23: 0.0217 REMARK 3 L TENSOR REMARK 3 L11: 1.2385 L22: 8.6684 REMARK 3 L33: 2.1520 L12: 1.8589 REMARK 3 L13: 0.8161 L23: 1.5143 REMARK 3 S TENSOR REMARK 3 S11: 0.0014 S12: 0.0076 S13: 0.3829 REMARK 3 S21: 0.3030 S22: -0.0214 S23: 0.4790 REMARK 3 S31: -0.3264 S32: -0.1773 S33: 0.0200 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 63 A 88 REMARK 3 ORIGIN FOR THE GROUP (A): 2.8964 -3.1089 54.5563 REMARK 3 T TENSOR REMARK 3 T11: 0.0901 T22: 0.0272 REMARK 3 T33: 0.0854 T12: 0.0195 REMARK 3 T13: -0.0312 T23: 0.0298 REMARK 3 L TENSOR REMARK 3 L11: 3.5875 L22: 5.6956 REMARK 3 L33: 3.1011 L12: 2.9451 REMARK 3 L13: 2.7235 L23: 1.9944 REMARK 3 S TENSOR REMARK 3 S11: -0.1353 S12: 0.1272 S13: 0.1934 REMARK 3 S21: 0.3205 S22: 0.1019 S23: -0.1482 REMARK 3 S31: -0.0590 S32: 0.1147 S33: 0.0333 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 89 A 111 REMARK 3 ORIGIN FOR THE GROUP (A): 8.4843 -2.2464 51.3889 REMARK 3 T TENSOR REMARK 3 T11: 0.0458 T22: 0.0659 REMARK 3 T33: 0.0709 T12: -0.0203 REMARK 3 T13: -0.0092 T23: 0.0476 REMARK 3 L TENSOR REMARK 3 L11: 2.9784 L22: 8.3630 REMARK 3 L33: 7.4922 L12: 0.5073 REMARK 3 L13: 1.5892 L23: 5.1352 REMARK 3 S TENSOR REMARK 3 S11: -0.0762 S12: 0.1980 S13: 0.0219 REMARK 3 S21: 0.2611 S22: 0.0797 S23: -0.3300 REMARK 3 S31: -0.0078 S32: 0.2859 S33: -0.0035 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 112 A 135 REMARK 3 ORIGIN FOR THE GROUP (A): -12.2366 -9.2183 51.0907 REMARK 3 T TENSOR REMARK 3 T11: 0.0430 T22: 0.1335 REMARK 3 T33: 0.2649 T12: 0.0106 REMARK 3 T13: -0.0115 T23: 0.0431 REMARK 3 L TENSOR REMARK 3 L11: 0.3401 L22: 6.2309 REMARK 3 L33: 0.8266 L12: 0.2581 REMARK 3 L13: -0.5045 L23: -0.7268 REMARK 3 S TENSOR REMARK 3 S11: 0.0188 S12: 0.1629 S13: 0.1763 REMARK 3 S21: -0.0885 S22: 0.2208 S23: 0.9849 REMARK 3 S31: 0.0003 S32: -0.3012 S33: -0.2397 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 136 A 159 REMARK 3 ORIGIN FOR THE GROUP (A): -14.6248 -30.4373 51.2686 REMARK 3 T TENSOR REMARK 3 T11: 0.0668 T22: 0.0826 REMARK 3 T33: 0.2761 T12: -0.0113 REMARK 3 T13: -0.0065 T23: -0.0366 REMARK 3 L TENSOR REMARK 3 L11: 3.3992 L22: 3.5475 REMARK 3 L33: 10.8961 L12: 1.0467 REMARK 3 L13: 0.5658 L23: 1.6926 REMARK 3 S TENSOR REMARK 3 S11: 0.0399 S12: 0.0917 S13: 0.0248 REMARK 3 S21: 0.0157 S22: -0.1862 S23: 0.9356 REMARK 3 S31: 0.1032 S32: -0.8995 S33: 0.1462 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 160 A 215 REMARK 3 ORIGIN FOR THE GROUP (A): -5.2603 -31.8355 53.7730 REMARK 3 T TENSOR REMARK 3 T11: 0.0481 T22: 0.0255 REMARK 3 T33: 0.0207 T12: -0.0056 REMARK 3 T13: 0.0085 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 2.6575 L22: 4.0857 REMARK 3 L33: 1.8076 L12: 0.6263 REMARK 3 L13: 1.0209 L23: 1.1038 REMARK 3 S TENSOR REMARK 3 S11: 0.0895 S12: 0.0949 S13: -0.1688 REMARK 3 S21: 0.0671 S22: -0.0647 S23: 0.0619 REMARK 3 S31: 0.2349 S32: -0.1037 S33: -0.0247 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 216 A 239 REMARK 3 ORIGIN FOR THE GROUP (A): 9.4934 -26.4053 58.2600 REMARK 3 T TENSOR REMARK 3 T11: 0.1288 T22: 0.1509 REMARK 3 T33: 0.0991 T12: -0.0206 REMARK 3 T13: -0.0280 T23: 0.0278 REMARK 3 L TENSOR REMARK 3 L11: 5.5398 L22: 12.8587 REMARK 3 L33: 6.1710 L12: 0.4036 REMARK 3 L13: 2.4185 L23: 6.4285 REMARK 3 S TENSOR REMARK 3 S11: 0.1703 S12: 0.0207 S13: 0.0332 REMARK 3 S21: -0.5376 S22: -0.0105 S23: -0.7710 REMARK 3 S31: -0.4405 S32: 0.5180 S33: -0.1598 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 240 A 271 REMARK 3 ORIGIN FOR THE GROUP (A): 6.1731 -38.6252 48.0183 REMARK 3 T TENSOR REMARK 3 T11: 0.0761 T22: 0.0390 REMARK 3 T33: 0.0743 T12: 0.0205 REMARK 3 T13: 0.0031 T23: -0.0321 REMARK 3 L TENSOR REMARK 3 L11: 6.3116 L22: 6.8558 REMARK 3 L33: 8.3511 L12: -1.3760 REMARK 3 L13: 1.5755 L23: -3.2285 REMARK 3 S TENSOR REMARK 3 S11: -0.0462 S12: 0.1427 S13: -0.0886 REMARK 3 S21: 0.0819 S22: -0.0786 S23: -0.4177 REMARK 3 S31: 0.0594 S32: 0.1331 S33: 0.1248 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 11 REMARK 3 ORIGIN FOR THE GROUP (A): -13.6166 -18.7883 10.5911 REMARK 3 T TENSOR REMARK 3 T11: 0.1027 T22: 0.0538 REMARK 3 T33: 0.1087 T12: 0.0032 REMARK 3 T13: -0.0360 T23: 0.0407 REMARK 3 L TENSOR REMARK 3 L11: 3.1922 L22: 9.0641 REMARK 3 L33: 4.2112 L12: -1.3552 REMARK 3 L13: -3.5903 L23: 0.3253 REMARK 3 S TENSOR REMARK 3 S11: -0.0192 S12: -0.1327 S13: -0.0020 REMARK 3 S21: -0.2208 S22: -0.0418 S23: -0.0727 REMARK 3 S31: 0.0810 S32: 0.1756 S33: 0.0611 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 12 B 31 REMARK 3 ORIGIN FOR THE GROUP (A): -10.9791 -35.4663 10.0364 REMARK 3 T TENSOR REMARK 3 T11: 0.0789 T22: 0.0795 REMARK 3 T33: 0.1232 T12: 0.0067 REMARK 3 T13: -0.0115 T23: -0.0196 REMARK 3 L TENSOR REMARK 3 L11: 1.8241 L22: 3.9833 REMARK 3 L33: 8.6157 L12: -0.6933 REMARK 3 L13: 0.7484 L23: -0.6785 REMARK 3 S TENSOR REMARK 3 S11: 0.1204 S12: 0.1651 S13: 0.0868 REMARK 3 S21: -0.0611 S22: -0.2193 S23: -0.2111 REMARK 3 S31: -0.3140 S32: 0.4203 S33: 0.0989 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 32 B 83 REMARK 3 ORIGIN FOR THE GROUP (A): -17.5266 -32.9425 12.5700 REMARK 3 T TENSOR REMARK 3 T11: 0.1665 T22: 0.0591 REMARK 3 T33: 0.1029 T12: -0.0019 REMARK 3 T13: -0.0471 T23: 0.0145 REMARK 3 L TENSOR REMARK 3 L11: 1.2960 L22: 3.7046 REMARK 3 L33: 1.3919 L12: -1.2558 REMARK 3 L13: -1.2887 L23: 0.8585 REMARK 3 S TENSOR REMARK 3 S11: -0.0461 S12: 0.0871 S13: -0.1883 REMARK 3 S21: -0.2457 S22: -0.0811 S23: 0.2964 REMARK 3 S31: 0.1666 S32: -0.1009 S33: 0.1272 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 84 B 97 REMARK 3 ORIGIN FOR THE GROUP (A): -2.9203 -36.5566 17.0709 REMARK 3 T TENSOR REMARK 3 T11: 0.1420 T22: 0.0416 REMARK 3 T33: 0.1668 T12: 0.0326 REMARK 3 T13: 0.0042 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 1.4415 L22: 6.3695 REMARK 3 L33: 9.0152 L12: -1.5281 REMARK 3 L13: -0.8412 L23: 2.7752 REMARK 3 S TENSOR REMARK 3 S11: -0.1126 S12: -0.1651 S13: -0.0910 REMARK 3 S21: 0.0485 S22: 0.2478 S23: -0.5418 REMARK 3 S31: 0.2176 S32: 0.3675 S33: -0.1352 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 98 B 136 REMARK 3 ORIGIN FOR THE GROUP (A): -20.1779 -28.5153 15.3660 REMARK 3 T TENSOR REMARK 3 T11: 0.1247 T22: 0.0628 REMARK 3 T33: 0.0825 T12: -0.0195 REMARK 3 T13: -0.0251 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 1.0028 L22: 2.7484 REMARK 3 L33: 1.1267 L12: -1.1140 REMARK 3 L13: -0.2798 L23: 0.1205 REMARK 3 S TENSOR REMARK 3 S11: -0.0294 S12: 0.0517 S13: -0.2250 REMARK 3 S21: -0.1006 S22: -0.0255 S23: 0.3407 REMARK 3 S31: 0.0591 S32: -0.2188 S33: 0.0549 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 137 B 159 REMARK 3 ORIGIN FOR THE GROUP (A): -30.9417 -5.9196 18.2480 REMARK 3 T TENSOR REMARK 3 T11: 0.0746 T22: 0.1602 REMARK 3 T33: 0.2742 T12: 0.0324 REMARK 3 T13: -0.0395 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 6.0336 L22: 3.4635 REMARK 3 L33: 11.9849 L12: -2.2551 REMARK 3 L13: 0.3093 L23: -1.1541 REMARK 3 S TENSOR REMARK 3 S11: -0.0647 S12: 0.0325 S13: 0.1137 REMARK 3 S21: -0.2222 S22: 0.0082 S23: 0.6769 REMARK 3 S31: -0.1290 S32: -1.3189 S33: 0.0565 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 160 B 203 REMARK 3 ORIGIN FOR THE GROUP (A): -22.8389 -3.1678 20.3064 REMARK 3 T TENSOR REMARK 3 T11: 0.0745 T22: 0.0487 REMARK 3 T33: 0.0520 T12: 0.0145 REMARK 3 T13: 0.0068 T23: 0.0241 REMARK 3 L TENSOR REMARK 3 L11: 2.6565 L22: 3.9817 REMARK 3 L33: 1.8663 L12: 0.4645 REMARK 3 L13: 0.5548 L23: -0.1587 REMARK 3 S TENSOR REMARK 3 S11: -0.0259 S12: -0.0709 S13: 0.2029 REMARK 3 S21: -0.0329 S22: 0.0368 S23: 0.2063 REMARK 3 S31: -0.1857 S32: -0.1594 S33: -0.0109 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 204 B 217 REMARK 3 ORIGIN FOR THE GROUP (A): -14.1864 -8.5839 9.3224 REMARK 3 T TENSOR REMARK 3 T11: 0.1970 T22: 0.0225 REMARK 3 T33: 0.1927 T12: -0.0265 REMARK 3 T13: 0.0019 T23: 0.0433 REMARK 3 L TENSOR REMARK 3 L11: 19.0345 L22: 2.9637 REMARK 3 L33: 5.2812 L12: -5.9062 REMARK 3 L13: -6.7546 L23: 3.6526 REMARK 3 S TENSOR REMARK 3 S11: 0.0287 S12: 0.1385 S13: 0.5292 REMARK 3 S21: -0.1802 S22: -0.0467 S23: -0.2674 REMARK 3 S31: -0.1898 S32: 0.0012 S33: 0.0180 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 218 B 229 REMARK 3 ORIGIN FOR THE GROUP (A): -2.9839 -17.6986 14.5980 REMARK 3 T TENSOR REMARK 3 T11: 0.7711 T22: 0.7491 REMARK 3 T33: 0.6796 T12: 0.2544 REMARK 3 T13: -0.1478 T23: -0.0794 REMARK 3 L TENSOR REMARK 3 L11: 0.1614 L22: 16.2923 REMARK 3 L33: 0.5674 L12: 1.5912 REMARK 3 L13: -0.3018 L23: -2.9939 REMARK 3 S TENSOR REMARK 3 S11: -0.0517 S12: -0.0300 S13: 0.0163 REMARK 3 S21: 0.2595 S22: 0.1296 S23: -0.0146 REMARK 3 S31: 0.0531 S32: 0.0298 S33: -0.0779 REMARK 3 REMARK 3 TLS GROUP : 21 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 230 B 266 REMARK 3 ORIGIN FOR THE GROUP (A): -9.1733 -1.8579 24.2817 REMARK 3 T TENSOR REMARK 3 T11: 0.0900 T22: 0.0679 REMARK 3 T33: 0.1058 T12: -0.0219 REMARK 3 T13: -0.0188 T23: 0.0248 REMARK 3 L TENSOR REMARK 3 L11: 1.4603 L22: 4.5298 REMARK 3 L33: 2.1643 L12: -0.1086 REMARK 3 L13: 0.7583 L23: 0.8193 REMARK 3 S TENSOR REMARK 3 S11: 0.0052 S12: 0.0117 S13: 0.0579 REMARK 3 S21: 0.1309 S22: 0.0536 S23: -0.4694 REMARK 3 S31: -0.2607 S32: 0.2566 S33: -0.0588 REMARK 3 REMARK 3 TLS GROUP : 22 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 267 B 271 REMARK 3 ORIGIN FOR THE GROUP (A): -17.8930 7.1170 27.2252 REMARK 3 T TENSOR REMARK 3 T11: 0.3956 T22: 0.1287 REMARK 3 T33: 0.3496 T12: -0.0718 REMARK 3 T13: 0.0881 T23: -0.1618 REMARK 3 L TENSOR REMARK 3 L11: 12.6789 L22: 8.3788 REMARK 3 L33: 25.2125 L12: -10.2174 REMARK 3 L13: -2.1048 L23: -0.0850 REMARK 3 S TENSOR REMARK 3 S11: -0.5319 S12: -0.4214 S13: 0.6425 REMARK 3 S21: 0.5318 S22: 0.3826 S23: -0.4726 REMARK 3 S31: -0.3682 S32: -0.8871 S33: 0.1493 REMARK 3 REMARK 3 TLS GROUP : 23 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 4 REMARK 3 ORIGIN FOR THE GROUP (A): -29.7705 -11.8945 35.8602 REMARK 3 T TENSOR REMARK 3 T11: 0.3591 T22: 0.6034 REMARK 3 T33: 0.3689 T12: 0.1052 REMARK 3 T13: 0.0541 T23: -0.1211 REMARK 3 L TENSOR REMARK 3 L11: 0.8313 L22: 15.7483 REMARK 3 L33: 11.4710 L12: -0.4369 REMARK 3 L13: -1.4270 L23: -11.0752 REMARK 3 S TENSOR REMARK 3 S11: -0.1541 S12: -0.3236 S13: 0.1405 REMARK 3 S21: 0.6989 S22: 0.5535 S23: 0.0569 REMARK 3 S31: -0.2820 S32: 0.3031 S33: -0.3995 REMARK 3 REMARK 3 TLS GROUP : 24 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 5 C 10 REMARK 3 ORIGIN FOR THE GROUP (A): -15.7480 -24.2375 35.0671 REMARK 3 T TENSOR REMARK 3 T11: 0.5179 T22: 0.2938 REMARK 3 T33: 0.2351 T12: 0.1919 REMARK 3 T13: 0.0496 T23: 0.0369 REMARK 3 L TENSOR REMARK 3 L11: 21.0474 L22: 1.1008 REMARK 3 L33: 11.2533 L12: -2.8793 REMARK 3 L13: -3.5212 L23: -2.2374 REMARK 3 S TENSOR REMARK 3 S11: -1.0060 S12: -1.3276 S13: -0.0405 REMARK 3 S21: 0.2395 S22: 0.5537 S23: -0.0890 REMARK 3 S31: 0.0957 S32: -1.0658 S33: 0.4523 REMARK 3 REMARK 3 TLS GROUP : 25 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 11 C 14 REMARK 3 ORIGIN FOR THE GROUP (A): 0.1809 -17.5744 33.0190 REMARK 3 T TENSOR REMARK 3 T11: 0.2954 T22: 0.2366 REMARK 3 T33: 0.2870 T12: -0.0091 REMARK 3 T13: 0.1163 T23: 0.1330 REMARK 3 L TENSOR REMARK 3 L11: 8.2434 L22: 13.6793 REMARK 3 L33: 5.7445 L12: 0.9292 REMARK 3 L13: 1.2798 L23: 8.8007 REMARK 3 S TENSOR REMARK 3 S11: 0.3616 S12: 0.7678 S13: 0.1523 REMARK 3 S21: -1.6402 S22: 0.0572 S23: -0.8066 REMARK 3 S31: -0.9973 S32: 0.1220 S33: -0.4189 REMARK 3 REMARK 3 TLS GROUP : 26 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 6 REMARK 3 ORIGIN FOR THE GROUP (A): -4.9553 -16.8453 39.3405 REMARK 3 T TENSOR REMARK 3 T11: 0.0972 T22: 0.0606 REMARK 3 T33: 0.0968 T12: -0.0198 REMARK 3 T13: -0.0010 T23: 0.0247 REMARK 3 L TENSOR REMARK 3 L11: 1.6521 L22: 0.0751 REMARK 3 L33: 13.8012 L12: -0.0850 REMARK 3 L13: 3.8809 L23: -0.7700 REMARK 3 S TENSOR REMARK 3 S11: 0.0738 S12: -0.1143 S13: -0.1695 REMARK 3 S21: -0.0204 S22: -0.0242 S23: -0.0359 REMARK 3 S31: 0.2192 S32: 0.0281 S33: -0.0496 REMARK 3 REMARK 3 TLS GROUP : 27 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 7 D 10 REMARK 3 ORIGIN FOR THE GROUP (A): -17.5372 -19.5756 25.3952 REMARK 3 T TENSOR REMARK 3 T11: 0.1269 T22: 0.0733 REMARK 3 T33: 0.1480 T12: 0.0627 REMARK 3 T13: 0.0372 T23: 0.0221 REMARK 3 L TENSOR REMARK 3 L11: 5.6995 L22: 6.3676 REMARK 3 L33: 12.0995 L12: 5.8125 REMARK 3 L13: 0.8038 L23: -1.4690 REMARK 3 S TENSOR REMARK 3 S11: -0.2213 S12: 0.0335 S13: -0.2712 REMARK 3 S21: -0.2268 S22: 0.1577 S23: -0.2890 REMARK 3 S31: 0.0807 S32: -0.5983 S33: 0.0636 REMARK 3 REMARK 3 TLS GROUP : 28 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 11 D 14 REMARK 3 ORIGIN FOR THE GROUP (A): -28.9344 -21.6252 38.4681 REMARK 3 T TENSOR REMARK 3 T11: 0.4041 T22: 0.9242 REMARK 3 T33: 0.5922 T12: 0.1301 REMARK 3 T13: 0.2500 T23: 0.0291 REMARK 3 L TENSOR REMARK 3 L11: 1.3530 L22: 6.5668 REMARK 3 L33: 27.3906 L12: -2.9783 REMARK 3 L13: -6.0871 L23: 13.3942 REMARK 3 S TENSOR REMARK 3 S11: -0.3614 S12: 0.0618 S13: -0.0732 REMARK 3 S21: 0.9289 S22: 0.0105 S23: 0.1585 REMARK 3 S31: 1.8393 S32: -0.3334 S33: 0.3510 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES WITH TLS ADDED REMARK 4 REMARK 4 4CIS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1290059223. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41439 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 40.930 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.15000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.7300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 1.18000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1XC8 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS PH 7.5, 2 MM SPERMIDINE, 1 REMARK 280 MM TCEP, 0.01MM ZNCL2 , 90 MM LISO4, 18% PEG 4000 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.53150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.44100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 56.34600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.44100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.53150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 56.34600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 ARG A 220 REMARK 465 THR A 221 REMARK 465 TYR A 222 REMARK 465 SER A 223 REMARK 465 ALA A 224 REMARK 465 LEU A 225 REMARK 465 GLY A 226 REMARK 465 SER A 227 REMARK 465 GLY A 272 REMARK 465 SER A 273 REMARK 465 ALA A 274 REMARK 465 TRP A 275 REMARK 465 SER A 276 REMARK 465 HIS A 277 REMARK 465 PRO A 278 REMARK 465 GLN A 279 REMARK 465 PHE A 280 REMARK 465 GLU A 281 REMARK 465 LYS A 282 REMARK 465 MET B 0 REMARK 465 THR B 221 REMARK 465 TYR B 222 REMARK 465 SER B 223 REMARK 465 ALA B 224 REMARK 465 GLY B 272 REMARK 465 SER B 273 REMARK 465 ALA B 274 REMARK 465 TRP B 275 REMARK 465 SER B 276 REMARK 465 HIS B 277 REMARK 465 PRO B 278 REMARK 465 GLN B 279 REMARK 465 PHE B 280 REMARK 465 GLU B 281 REMARK 465 LYS B 282 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 220 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA C 8 O3' DC C 9 P -0.103 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 68 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG B 31 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 DG C 1 C5' - C4' - O4' ANGL. DEV. = 9.6 DEGREES REMARK 500 DA C 6 O5' - C5' - C4' ANGL. DEV. = -5.1 DEGREES REMARK 500 DC D 1 O4' - C4' - C3' ANGL. DEV. = -3.3 DEGREES REMARK 500 68Z D 7 C3' - O3' - P ANGL. DEV. = 20.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 74 -119.56 52.56 REMARK 500 ASP A 107 103.36 -163.72 REMARK 500 ARG B 74 -122.76 44.10 REMARK 500 ASP B 107 100.24 -165.48 REMARK 500 GLN B 163 -0.74 83.56 REMARK 500 ILE B 219 -63.71 -91.76 REMARK 500 VAL B 237 -41.00 -136.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 CARBOCYCLIC 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE REMARK 600 (68Z): CARBOCYCLIC RIBOSE REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 300 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 245 SG REMARK 620 2 CYS A 248 SG 111.1 REMARK 620 3 CYS A 265 SG 113.0 98.0 REMARK 620 4 CYS A 268 SG 108.1 111.3 115.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 300 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 245 SG REMARK 620 2 CYS B 248 SG 114.8 REMARK 620 3 CYS B 265 SG 112.6 97.4 REMARK 620 4 CYS B 268 SG 110.4 110.5 110.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BU3 A 1272 REMARK 999 REMARK 999 SEQUENCE REMARK 999 C-TERMINAL STREP-TAG REMARK 999 CONTAINS CARBOCYCLIC 8-OXO GUANINE BASE DBREF 4CIS A 0 271 UNP Q031W6 Q031W6_LACLS 1 272 DBREF 4CIS B 0 271 UNP Q031W6 Q031W6_LACLS 1 272 DBREF 4CIS C 1 14 PDB 4CIS 4CIS 1 14 DBREF 4CIS D 1 14 PDB 4CIS 4CIS 1 14 SEQADV 4CIS GLY A 272 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS SER A 273 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS ALA A 274 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS TRP A 275 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS SER A 276 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS HIS A 277 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS PRO A 278 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS GLN A 279 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS PHE A 280 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS GLU A 281 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS LYS A 282 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS ILE A 53 UNP Q031W6 LEU 54 CONFLICT SEQADV 4CIS LEU A 123 UNP Q031W6 ILE 124 CONFLICT SEQADV 4CIS ILE A 193 UNP Q031W6 THR 194 CONFLICT SEQADV 4CIS PHE A 267 UNP Q031W6 VAL 268 CONFLICT SEQADV 4CIS GLY B 272 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS SER B 273 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS ALA B 274 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS TRP B 275 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS SER B 276 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS HIS B 277 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS PRO B 278 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS GLN B 279 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS PHE B 280 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS GLU B 281 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS LYS B 282 UNP Q031W6 EXPRESSION TAG SEQADV 4CIS ILE B 53 UNP Q031W6 LEU 54 CONFLICT SEQADV 4CIS LEU B 123 UNP Q031W6 ILE 124 CONFLICT SEQADV 4CIS ILE B 193 UNP Q031W6 THR 194 CONFLICT SEQADV 4CIS PHE B 267 UNP Q031W6 VAL 268 CONFLICT SEQRES 1 A 283 MET PRO GLU LEU PRO GLU VAL GLU THR VAL ARG ARG GLU SEQRES 2 A 283 LEU GLU LYS ARG ILE VAL GLY GLN LYS ILE ILE SER ILE SEQRES 3 A 283 GLU ALA THR TYR PRO ARG MET VAL LEU THR GLY PHE GLU SEQRES 4 A 283 GLN LEU LYS LYS GLU LEU THR GLY LYS ILE ILE GLN GLY SEQRES 5 A 283 ILE ILE ARG ARG GLY LYS TYR LEU ILE PHE GLU ILE GLY SEQRES 6 A 283 ASP ASP PHE ARG LEU ILE SER HIS LEU ARG MET GLU GLY SEQRES 7 A 283 LYS TYR ARG LEU ALA THR LEU ASP ALA PRO ARG GLU LYS SEQRES 8 A 283 HIS ASP HIS LEU THR MET LYS PHE SER ASP GLY GLN LEU SEQRES 9 A 283 ILE TYR ALA ASP VAL ARG LYS PHE GLY THR TRP GLU LEU SEQRES 10 A 283 ILE SER THR ASP GLN VAL LEU PRO TYR PHE LEU ASN LYS SEQRES 11 A 283 LYS ILE GLY PRO GLU PRO THR TYR GLU ASP PHE ASP GLU SEQRES 12 A 283 LYS LEU PHE ARG GLU LYS LEU ARG LYS SER THR LYS LYS SEQRES 13 A 283 ILE LYS PRO TYR LEU LEU GLU GLN THR LEU VAL ALA GLY SEQRES 14 A 283 LEU GLY ASN ILE TYR VAL ASP GLU VAL LEU TRP LEU ALA SEQRES 15 A 283 LYS ILE HIS PRO GLU LYS GLU ALA ASN GLN LEU ILE GLU SEQRES 16 A 283 SER SER ILE HIS LEU LEU HIS ASP SER ILE ILE GLU ILE SEQRES 17 A 283 LEU GLN LYS ALA ILE LYS LEU GLY GLY SER SER ILE ARG SEQRES 18 A 283 THR TYR SER ALA LEU GLY SER THR GLY LYS MET GLN ASN SEQRES 19 A 283 GLU LEU GLN VAL TYR GLY LYS THR GLY GLU LYS CYS SER SEQRES 20 A 283 ARG CYS GLY ALA GLU ILE GLN LYS ILE LYS VAL ALA GLY SEQRES 21 A 283 ARG GLY THR HIS PHE CYS PRO PHE CYS GLN GLN LYS GLY SEQRES 22 A 283 SER ALA TRP SER HIS PRO GLN PHE GLU LYS SEQRES 1 B 283 MET PRO GLU LEU PRO GLU VAL GLU THR VAL ARG ARG GLU SEQRES 2 B 283 LEU GLU LYS ARG ILE VAL GLY GLN LYS ILE ILE SER ILE SEQRES 3 B 283 GLU ALA THR TYR PRO ARG MET VAL LEU THR GLY PHE GLU SEQRES 4 B 283 GLN LEU LYS LYS GLU LEU THR GLY LYS ILE ILE GLN GLY SEQRES 5 B 283 ILE ILE ARG ARG GLY LYS TYR LEU ILE PHE GLU ILE GLY SEQRES 6 B 283 ASP ASP PHE ARG LEU ILE SER HIS LEU ARG MET GLU GLY SEQRES 7 B 283 LYS TYR ARG LEU ALA THR LEU ASP ALA PRO ARG GLU LYS SEQRES 8 B 283 HIS ASP HIS LEU THR MET LYS PHE SER ASP GLY GLN LEU SEQRES 9 B 283 ILE TYR ALA ASP VAL ARG LYS PHE GLY THR TRP GLU LEU SEQRES 10 B 283 ILE SER THR ASP GLN VAL LEU PRO TYR PHE LEU ASN LYS SEQRES 11 B 283 LYS ILE GLY PRO GLU PRO THR TYR GLU ASP PHE ASP GLU SEQRES 12 B 283 LYS LEU PHE ARG GLU LYS LEU ARG LYS SER THR LYS LYS SEQRES 13 B 283 ILE LYS PRO TYR LEU LEU GLU GLN THR LEU VAL ALA GLY SEQRES 14 B 283 LEU GLY ASN ILE TYR VAL ASP GLU VAL LEU TRP LEU ALA SEQRES 15 B 283 LYS ILE HIS PRO GLU LYS GLU ALA ASN GLN LEU ILE GLU SEQRES 16 B 283 SER SER ILE HIS LEU LEU HIS ASP SER ILE ILE GLU ILE SEQRES 17 B 283 LEU GLN LYS ALA ILE LYS LEU GLY GLY SER SER ILE ARG SEQRES 18 B 283 THR TYR SER ALA LEU GLY SER THR GLY LYS MET GLN ASN SEQRES 19 B 283 GLU LEU GLN VAL TYR GLY LYS THR GLY GLU LYS CYS SER SEQRES 20 B 283 ARG CYS GLY ALA GLU ILE GLN LYS ILE LYS VAL ALA GLY SEQRES 21 B 283 ARG GLY THR HIS PHE CYS PRO PHE CYS GLN GLN LYS GLY SEQRES 22 B 283 SER ALA TRP SER HIS PRO GLN PHE GLU LYS SEQRES 1 C 14 DG DC DG DA DG DA DA DA DC DA DA DA DG SEQRES 2 C 14 DA SEQRES 1 D 14 DC DT DC DT DT DT 68Z DT DT DT DC DT DC SEQRES 2 D 14 DG MODRES 4CIS 68Z D 7 DG HET 68Z D 7 23 HET ZN A 300 1 HET BU3 A1272 6 HET ZN B 300 1 HETNAM 68Z 1R,2S,4R)-4-[2-AZANYL-6,8-BIS(OXIDANYLIDENE)-1,7- HETNAM 2 68Z DIHYDROPURIN-9-YL]-2-OXIDANYL-CYCLOPENTYL]METHYL HETNAM 3 68Z DIHYDROGEN PHOSPHATE HETNAM ZN ZINC ION HETNAM BU3 (R,R)-2,3-BUTANEDIOL FORMUL 4 68Z C11 H16 N5 O7 P FORMUL 5 ZN 2(ZN 2+) FORMUL 6 BU3 C4 H10 O2 FORMUL 8 HOH *135(H2 O) HELIX 1 1 GLU A 2 VAL A 18 1 17 HELIX 2 2 TYR A 29 MET A 32 5 4 HELIX 3 3 GLY A 36 THR A 45 1 10 HELIX 4 4 GLN A 121 LYS A 129 1 9 HELIX 5 5 ASP A 141 LYS A 151 1 11 HELIX 6 6 LYS A 155 GLU A 162 1 8 HELIX 7 7 GLY A 170 ALA A 181 1 12 HELIX 8 8 ALA A 189 LEU A 192 5 4 HELIX 9 9 ILE A 193 LEU A 214 1 22 HELIX 10 10 LYS A 230 LEU A 235 5 6 HELIX 11 11 GLU B 2 VAL B 18 1 17 HELIX 12 12 TYR B 29 MET B 32 5 4 HELIX 13 13 GLY B 36 THR B 45 1 10 HELIX 14 14 GLN B 121 LYS B 130 1 10 HELIX 15 15 ASP B 141 LYS B 151 1 11 HELIX 16 16 LYS B 155 GLU B 162 1 8 HELIX 17 17 GLY B 170 ALA B 181 1 12 HELIX 18 18 ALA B 189 LEU B 192 5 4 HELIX 19 19 ILE B 193 LEU B 214 1 22 HELIX 20 20 LYS B 230 LEU B 235 5 6 SHEET 1 AA 4 SER A 24 ALA A 27 0 SHEET 2 AA 4 ASP A 92 PHE A 98 -1 O THR A 95 N GLU A 26 SHEET 3 AA 4 GLY A 101 ALA A 106 -1 O GLY A 101 N PHE A 98 SHEET 4 AA 4 LYS A 78 ALA A 82 -1 O LYS A 78 N ALA A 106 SHEET 1 AB 4 ILE A 49 ARG A 55 0 SHEET 2 AB 4 TYR A 58 ILE A 63 -1 O TYR A 58 N ARG A 55 SHEET 3 AB 4 PHE A 67 HIS A 72 -1 O PHE A 67 N ILE A 63 SHEET 4 AB 4 THR A 113 SER A 118 -1 O THR A 113 N HIS A 72 SHEET 1 AC 2 GLN A 253 VAL A 257 0 SHEET 2 AC 2 ARG A 260 PHE A 264 -1 O ARG A 260 N VAL A 257 SHEET 1 BA 4 SER B 24 ALA B 27 0 SHEET 2 BA 4 ASP B 92 PHE B 98 -1 O THR B 95 N GLU B 26 SHEET 3 BA 4 GLY B 101 ALA B 106 -1 O GLY B 101 N PHE B 98 SHEET 4 BA 4 LYS B 78 ALA B 82 -1 O LYS B 78 N ALA B 106 SHEET 1 BB 4 ILE B 49 ARG B 55 0 SHEET 2 BB 4 TYR B 58 ILE B 63 -1 O TYR B 58 N ARG B 55 SHEET 3 BB 4 PHE B 67 HIS B 72 -1 O PHE B 67 N ILE B 63 SHEET 4 BB 4 THR B 113 SER B 118 -1 O THR B 113 N HIS B 72 SHEET 1 BC 2 GLN B 253 VAL B 257 0 SHEET 2 BC 2 ARG B 260 PHE B 264 -1 O ARG B 260 N VAL B 257 LINK O3' DT D 6 P 68Z D 7 1555 1555 1.58 LINK O3' 68Z D 7 P DT D 8 1555 1555 1.62 LINK SG CYS A 245 ZN ZN A 300 1555 1555 2.30 LINK SG CYS A 248 ZN ZN A 300 1555 1555 2.33 LINK SG CYS A 265 ZN ZN A 300 1555 1555 2.34 LINK SG CYS A 268 ZN ZN A 300 1555 1555 2.17 LINK SG CYS B 245 ZN ZN B 300 1555 1555 2.20 LINK SG CYS B 248 ZN ZN B 300 1555 1555 2.45 LINK SG CYS B 265 ZN ZN B 300 1555 1555 2.24 LINK SG CYS B 268 ZN ZN B 300 1555 1555 2.25 SITE 1 AC1 4 CYS A 245 CYS A 248 CYS A 265 CYS A 268 SITE 1 AC2 4 CYS B 245 CYS B 248 CYS B 265 CYS B 268 SITE 1 AC3 7 TYR A 58 HIS A 72 ARG A 74 THR A 113 SITE 2 AC3 7 LYS A 129 DC D 3 DT D 4 CRYST1 43.063 112.692 132.882 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023222 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008874 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007525 0.00000 MTRIX1 1 0.976400 0.005880 0.215700 11.61000 1 MTRIX2 1 0.047800 -0.980700 -0.189700 -31.60000 1 MTRIX3 1 0.210400 0.195500 -0.957900 76.34000 1