HEADER TRANSFERASE 23-DEC-13 4CJZ TITLE CRYSTAL STRUCTURE OF THE INTEGRAL MEMBRANE DIACYLGLYCEROL KINASE DGKA- TITLE 2 9.9, DELTA 4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIACYLGLYCEROL KINASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: DAGK, DIGLYCERIDE KINASE, DGK, DIACYLGLYCEROL KINASE -DELTA COMPND 5 4; COMPND 6 EC: 2.7.1.107; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K-12; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: WH1061; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PTRCHISB; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PTRCHISB-DGKA-DELTA 4 KEYWDS TRANSFERASE, IN MESO CRYSTALLISATION, LCP, LIPID CUBIC PHASE, LIPIDIC KEYWDS 2 MESOPHASE, LIPID METABOLISM, MEMBRANE PROTEIN, MICROCRYSTAL, KEYWDS 3 MONOACYLGLYCEROL, MONOOLEIN, 9.9 MAG, THERMOSTABLE MUTANT EXPDTA X-RAY DIFFRACTION AUTHOR D.LI,D.ARAGAO,V.E.PYE,M.CAFFREY REVDAT 6 07-FEB-24 4CJZ 1 REMARK REVDAT 5 29-MAR-23 4CJZ 1 AUTHOR REMARK REVDAT 4 03-APR-19 4CJZ 1 REMARK REVDAT 3 06-MAR-19 4CJZ 1 REMARK REVDAT 2 16-NOV-16 4CJZ 1 JRNL REVDAT 1 28-JAN-15 4CJZ 0 JRNL AUTH D.LI,M.CAFFREY JRNL TITL CRYSTAL STRUCTURE OF THE INTEGRAL MEMBRANE DIACYLGLYCEROL JRNL TITL 2 KINASE WITH ZN-AMPPCP BOUND AND ITS CATALYTIC MECHANISM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 10166 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.257 REMARK 3 R VALUE (WORKING SET) : 0.255 REMARK 3 FREE R VALUE : 0.292 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 475 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 53.2739 - 4.6867 0.99 3317 172 0.2545 0.2889 REMARK 3 2 4.6867 - 3.7202 1.00 3203 155 0.2482 0.2784 REMARK 3 3 3.7202 - 3.2500 1.00 3171 148 0.2758 0.3384 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 108.8 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 142.5 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2641 REMARK 3 ANGLE : 0.405 3593 REMARK 3 CHIRALITY : 0.028 444 REMARK 3 PLANARITY : 0.001 428 REMARK 3 DIHEDRAL : 9.905 907 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 7 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.8716 3.5831 -8.4121 REMARK 3 T TENSOR REMARK 3 T11: 1.3540 T22: 0.9788 REMARK 3 T33: 0.8782 T12: -0.1012 REMARK 3 T13: -0.1692 T23: 0.0563 REMARK 3 L TENSOR REMARK 3 L11: 6.0112 L22: 4.2728 REMARK 3 L33: 4.2567 L12: -0.9389 REMARK 3 L13: -1.2952 L23: 3.9838 REMARK 3 S TENSOR REMARK 3 S11: 0.6374 S12: 0.1005 S13: 0.6324 REMARK 3 S21: 0.0474 S22: 0.2501 S23: -0.5852 REMARK 3 S31: 0.0682 S32: -0.0187 S33: -0.8048 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 52 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.3272 11.0499 -14.2127 REMARK 3 T TENSOR REMARK 3 T11: 1.2703 T22: 0.8055 REMARK 3 T33: 0.9206 T12: -0.2027 REMARK 3 T13: -0.1002 T23: 0.0366 REMARK 3 L TENSOR REMARK 3 L11: 3.9643 L22: 5.2141 REMARK 3 L33: 2.1671 L12: 2.1837 REMARK 3 L13: 0.6971 L23: 1.5124 REMARK 3 S TENSOR REMARK 3 S11: -0.2075 S12: 0.0912 S13: -0.0586 REMARK 3 S21: 0.1188 S22: -0.4680 S23: -0.5275 REMARK 3 S31: -2.0443 S32: 1.4130 S33: 0.4754 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 87 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.6019 21.2379 -34.4087 REMARK 3 T TENSOR REMARK 3 T11: 1.7513 T22: 1.7057 REMARK 3 T33: 1.5897 T12: -0.0273 REMARK 3 T13: 0.0761 T23: -0.4297 REMARK 3 L TENSOR REMARK 3 L11: 1.1661 L22: 0.0065 REMARK 3 L33: 9.5165 L12: -0.0948 REMARK 3 L13: 3.3051 L23: -0.2508 REMARK 3 S TENSOR REMARK 3 S11: -0.2788 S12: 0.7569 S13: -0.7830 REMARK 3 S21: 0.1968 S22: -0.5628 S23: -2.0906 REMARK 3 S31: -0.5991 S32: 0.8672 S33: 0.3303 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 92 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.5025 19.5333 -3.4653 REMARK 3 T TENSOR REMARK 3 T11: 1.5246 T22: 0.5310 REMARK 3 T33: 0.9824 T12: -0.1856 REMARK 3 T13: -0.0868 T23: 0.0413 REMARK 3 L TENSOR REMARK 3 L11: 3.6928 L22: 4.9670 REMARK 3 L33: 2.0140 L12: 1.5900 REMARK 3 L13: 2.3917 L23: 1.1538 REMARK 3 S TENSOR REMARK 3 S11: 0.2355 S12: 0.1224 S13: 0.0844 REMARK 3 S21: -0.4457 S22: 0.1176 S23: 0.2654 REMARK 3 S31: -0.6597 S32: -0.0800 S33: -0.6874 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND (RESID 5 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.1854 3.2595 -11.4554 REMARK 3 T TENSOR REMARK 3 T11: 1.4805 T22: 1.2962 REMARK 3 T33: 1.0012 T12: -0.3662 REMARK 3 T13: -0.0496 T23: -0.0610 REMARK 3 L TENSOR REMARK 3 L11: 5.6320 L22: 4.1831 REMARK 3 L33: 5.1530 L12: 0.2847 REMARK 3 L13: 1.1570 L23: -0.9698 REMARK 3 S TENSOR REMARK 3 S11: 0.2038 S12: -0.0526 S13: -0.1619 REMARK 3 S21: -0.4254 S22: -0.1383 S23: 0.6501 REMARK 3 S31: 0.1188 S32: -1.7682 S33: -0.1481 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND (RESID 52 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.1879 2.7483 -11.5753 REMARK 3 T TENSOR REMARK 3 T11: 1.0901 T22: 0.5022 REMARK 3 T33: 0.7592 T12: -0.2956 REMARK 3 T13: -0.0831 T23: -0.0138 REMARK 3 L TENSOR REMARK 3 L11: 3.4262 L22: 5.9891 REMARK 3 L33: 5.3762 L12: -0.7500 REMARK 3 L13: 0.1881 L23: -0.2828 REMARK 3 S TENSOR REMARK 3 S11: 0.0223 S12: 0.0272 S13: -0.0450 REMARK 3 S21: -0.3076 S22: -0.2906 S23: -0.2667 REMARK 3 S31: 0.8214 S32: -0.3058 S33: 0.2184 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN C AND (RESID 16 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.3115 25.5765 -7.3434 REMARK 3 T TENSOR REMARK 3 T11: 1.8583 T22: 1.0379 REMARK 3 T33: 1.4138 T12: -0.0839 REMARK 3 T13: -0.1013 T23: -0.1755 REMARK 3 L TENSOR REMARK 3 L11: 4.9126 L22: 2.9946 REMARK 3 L33: 9.9399 L12: -1.9579 REMARK 3 L13: 0.9933 L23: 0.8443 REMARK 3 S TENSOR REMARK 3 S11: 0.1231 S12: 0.5552 S13: 0.4038 REMARK 3 S21: 0.3190 S22: -0.0239 S23: 0.4168 REMARK 3 S31: -2.6265 S32: -0.4529 S33: -0.0021 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN C AND (RESID 52 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.7092 13.4619 -12.3155 REMARK 3 T TENSOR REMARK 3 T11: 1.2691 T22: 1.0103 REMARK 3 T33: 0.9471 T12: -0.2281 REMARK 3 T13: -0.0191 T23: -0.0303 REMARK 3 L TENSOR REMARK 3 L11: 3.4869 L22: 2.2732 REMARK 3 L33: 3.3022 L12: -0.9203 REMARK 3 L13: -1.1603 L23: 2.8917 REMARK 3 S TENSOR REMARK 3 S11: 0.1514 S12: 0.1284 S13: 0.1308 REMARK 3 S21: -0.3749 S22: -0.6064 S23: 0.2636 REMARK 3 S31: -1.4057 S32: -1.3693 S33: 0.3614 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4CJZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1290057037. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03320 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL CRYO REMARK 200 -COOLED REMARK 200 OPTICS : K-B PAIR OF BIOMORPH MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10196 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.250 REMARK 200 RESOLUTION RANGE LOW (A) : 53.270 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 9.700 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 10.00 REMARK 200 R MERGE FOR SHELL (I) : 1.15000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3ZE5 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 7-8 %(V/V) 2-METHYL-2, 4-PENTANEDIOL REMARK 280 (MPD), 2-4 %(V/V) 1,4-BUTANEDIOL, 0.1 M SODIUM CHLORIDE, 0.1 M REMARK 280 LITHIUM NITRATE, 0.1 M SODIUM CITRATE/HCL PH 5.6. CRYSTALLIZED REMARK 280 USING THE IN MESO (LIPIDIC CUBIC PHASE) METHOD AT 4 DEGREES REMARK 280 CELCIUS WITH THE 9.9 MONOACYLGLYCEROL (9.9 MAG, MONOOLEIN) AS REMARK 280 THE HOSTING LIPID., TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.42667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 132.85333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 132.85333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 66.42667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -89.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 GLU A -1 REMARK 465 LEU A 0 REMARK 465 ALA A 1 REMARK 465 ASN A 2 REMARK 465 ASN A 3 REMARK 465 THR A 4 REMARK 465 THR A 5 REMARK 465 GLY A 6 REMARK 465 GLY A 121 REMARK 465 GLY B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 GLU B -1 REMARK 465 LEU B 0 REMARK 465 ALA B 1 REMARK 465 ASN B 2 REMARK 465 ASN B 3 REMARK 465 THR B 4 REMARK 465 GLY C -8 REMARK 465 HIS C -7 REMARK 465 HIS C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 GLU C -1 REMARK 465 LEU C 0 REMARK 465 ALA C 1 REMARK 465 ASN C 2 REMARK 465 ASN C 3 REMARK 465 THR C 4 REMARK 465 THR C 5 REMARK 465 GLY C 6 REMARK 465 PHE C 7 REMARK 465 THR C 8 REMARK 465 ARG C 9 REMARK 465 ILE C 10 REMARK 465 ILE C 11 REMARK 465 LYS C 12 REMARK 465 ALA C 13 REMARK 465 ALA C 14 REMARK 465 GLY C 15 REMARK 465 PHE C 120 REMARK 465 GLY C 121 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLC C 1120 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4CK0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE INTEGRAL MEMBRANE DIACYLGLYCEROL KINASE - REMARK 900 FORM 2 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT CONTAINS AN N-TERMIANL HIS TAG 'GHHHHHHEL'. REMARK 999 COMPARED TO THE WILDTYPE FORM, THE PROTEIN HAS FOUR REMARK 999 MUTATIONS. THEY ARE I53C, I70L, M96L AND V107D. DBREF 4CJZ A 1 121 UNP P0ABN1 KDGL_ECOLI 2 122 DBREF 4CJZ B 1 121 UNP P0ABN1 KDGL_ECOLI 2 122 DBREF 4CJZ C 1 121 UNP P0ABN1 KDGL_ECOLI 2 122 SEQADV 4CJZ GLY A -8 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ HIS A -7 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ HIS A -6 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ HIS A -5 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ HIS A -4 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ HIS A -3 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ HIS A -2 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ GLU A -1 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ LEU A 0 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ CYS A 53 UNP P0ABN1 ILE 54 ENGINEERED MUTATION SEQADV 4CJZ LEU A 70 UNP P0ABN1 ILE 71 ENGINEERED MUTATION SEQADV 4CJZ LEU A 96 UNP P0ABN1 MET 97 ENGINEERED MUTATION SEQADV 4CJZ ASP A 107 UNP P0ABN1 VAL 108 ENGINEERED MUTATION SEQADV 4CJZ GLY B -8 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ HIS B -7 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ HIS B -6 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ HIS B -5 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ HIS B -4 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ HIS B -3 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ HIS B -2 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ GLU B -1 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ LEU B 0 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ CYS B 53 UNP P0ABN1 ILE 54 ENGINEERED MUTATION SEQADV 4CJZ LEU B 70 UNP P0ABN1 ILE 71 ENGINEERED MUTATION SEQADV 4CJZ LEU B 96 UNP P0ABN1 MET 97 ENGINEERED MUTATION SEQADV 4CJZ ASP B 107 UNP P0ABN1 VAL 108 ENGINEERED MUTATION SEQADV 4CJZ GLY C -8 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ HIS C -7 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ HIS C -6 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ HIS C -5 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ HIS C -4 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ HIS C -3 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ HIS C -2 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ GLU C -1 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ LEU C 0 UNP P0ABN1 EXPRESSION TAG SEQADV 4CJZ CYS C 53 UNP P0ABN1 ILE 54 ENGINEERED MUTATION SEQADV 4CJZ LEU C 70 UNP P0ABN1 ILE 71 ENGINEERED MUTATION SEQADV 4CJZ LEU C 96 UNP P0ABN1 MET 97 ENGINEERED MUTATION SEQADV 4CJZ ASP C 107 UNP P0ABN1 VAL 108 ENGINEERED MUTATION SEQRES 1 A 130 GLY HIS HIS HIS HIS HIS HIS GLU LEU ALA ASN ASN THR SEQRES 2 A 130 THR GLY PHE THR ARG ILE ILE LYS ALA ALA GLY TYR SER SEQRES 3 A 130 TRP LYS GLY LEU ARG ALA ALA TRP ILE ASN GLU ALA ALA SEQRES 4 A 130 PHE ARG GLN GLU GLY VAL ALA VAL LEU LEU ALA VAL VAL SEQRES 5 A 130 ILE ALA CYS TRP LEU ASP VAL ASP ALA CYS THR ARG VAL SEQRES 6 A 130 LEU LEU ILE SER SER VAL MET LEU VAL MET ILE VAL GLU SEQRES 7 A 130 LEU LEU ASN SER ALA ILE GLU ALA VAL VAL ASP ARG ILE SEQRES 8 A 130 GLY SER GLU TYR HIS GLU LEU SER GLY ARG ALA LYS ASP SEQRES 9 A 130 LEU GLY SER ALA ALA VAL LEU ILE ALA ILE ILE ASP ALA SEQRES 10 A 130 VAL ILE THR TRP CYS ILE LEU LEU TRP SER HIS PHE GLY SEQRES 1 B 130 GLY HIS HIS HIS HIS HIS HIS GLU LEU ALA ASN ASN THR SEQRES 2 B 130 THR GLY PHE THR ARG ILE ILE LYS ALA ALA GLY TYR SER SEQRES 3 B 130 TRP LYS GLY LEU ARG ALA ALA TRP ILE ASN GLU ALA ALA SEQRES 4 B 130 PHE ARG GLN GLU GLY VAL ALA VAL LEU LEU ALA VAL VAL SEQRES 5 B 130 ILE ALA CYS TRP LEU ASP VAL ASP ALA CYS THR ARG VAL SEQRES 6 B 130 LEU LEU ILE SER SER VAL MET LEU VAL MET ILE VAL GLU SEQRES 7 B 130 LEU LEU ASN SER ALA ILE GLU ALA VAL VAL ASP ARG ILE SEQRES 8 B 130 GLY SER GLU TYR HIS GLU LEU SER GLY ARG ALA LYS ASP SEQRES 9 B 130 LEU GLY SER ALA ALA VAL LEU ILE ALA ILE ILE ASP ALA SEQRES 10 B 130 VAL ILE THR TRP CYS ILE LEU LEU TRP SER HIS PHE GLY SEQRES 1 C 130 GLY HIS HIS HIS HIS HIS HIS GLU LEU ALA ASN ASN THR SEQRES 2 C 130 THR GLY PHE THR ARG ILE ILE LYS ALA ALA GLY TYR SER SEQRES 3 C 130 TRP LYS GLY LEU ARG ALA ALA TRP ILE ASN GLU ALA ALA SEQRES 4 C 130 PHE ARG GLN GLU GLY VAL ALA VAL LEU LEU ALA VAL VAL SEQRES 5 C 130 ILE ALA CYS TRP LEU ASP VAL ASP ALA CYS THR ARG VAL SEQRES 6 C 130 LEU LEU ILE SER SER VAL MET LEU VAL MET ILE VAL GLU SEQRES 7 C 130 LEU LEU ASN SER ALA ILE GLU ALA VAL VAL ASP ARG ILE SEQRES 8 C 130 GLY SER GLU TYR HIS GLU LEU SER GLY ARG ALA LYS ASP SEQRES 9 C 130 LEU GLY SER ALA ALA VAL LEU ILE ALA ILE ILE ASP ALA SEQRES 10 C 130 VAL ILE THR TRP CYS ILE LEU LEU TRP SER HIS PHE GLY HET OLC C1120 25 HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETSYN OLC 1-OLEOYL-R-GLYCEROL FORMUL 4 OLC C21 H40 O4 HELIX 1 1 ARG A 9 GLU A 28 1 20 HELIX 2 2 GLU A 28 LEU A 48 1 21 HELIX 3 3 ASP A 51 HIS A 87 1 37 HELIX 4 4 GLY A 91 PHE A 120 1 30 HELIX 5 5 THR B 5 GLU B 28 1 24 HELIX 6 6 GLU B 28 LEU B 48 1 21 HELIX 7 7 ASP B 51 TYR B 86 1 36 HELIX 8 8 GLY B 91 PHE B 120 1 30 HELIX 9 9 TYR C 16 GLU C 28 1 13 HELIX 10 10 GLU C 28 LEU C 48 1 21 HELIX 11 11 ASP C 51 GLY C 83 1 33 HELIX 12 12 HIS C 87 TRP C 117 1 31 SITE 1 AC1 9 ALA B 13 ALA C 30 GLN C 33 GLU C 69 SITE 2 AC1 9 ASN C 72 SER C 98 VAL C 101 ALA C 108 SITE 3 AC1 9 TRP C 112 CRYST1 72.780 72.780 199.280 90.00 90.00 120.00 P 31 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013740 0.007933 0.000000 0.00000 SCALE2 0.000000 0.015866 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005018 0.00000