HEADER OXIDOREDUCTASE 11-JAN-14 4CL3 TITLE 1.70 A RESOLUTION STRUCTURE OF THE MALATE DEHYDROGENASE FROM TITLE 2 CHLOROFLEXUS AURANTIACUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: MALATE DEHYDROGENASE; COMPND 3 CHAIN: A, D; COMPND 4 EC: 1.1.1.37 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHLOROFLEXUS SP. Y-400-FL; SOURCE 3 ORGANISM_TAXID: 480224; SOURCE 4 ATCC: 2936; SOURCE 5 OTHER_DETAILS: DSM 63 KEYWDS THERMOPHILE, OXIDOREDUCTASE, TRICARBOXYLIC ACID CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR R.TALON,D.MADERN,E.GIRARD REVDAT 3 06-MAR-19 4CL3 1 REMARK REVDAT 2 19-MAR-14 4CL3 1 JRNL REVDAT 1 05-FEB-14 4CL3 0 SPRSDE 05-FEB-14 4CL3 4BGT JRNL AUTH R.TALON,N.COQUELLE,D.MADERN,E.GIRARD JRNL TITL AN EXPERIMENTAL POINT OF VIEW ON HYDRATION/SOLVATION IN JRNL TITL 2 HALOPHILIC PROTEINS. JRNL REF FRONT.MICROBIOL. V. 5 66 2014 JRNL REFN ESSN 1664-302X JRNL PMID 24600446 JRNL DOI 10.3389/FMICB.2014.00066 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.COLLETIER,A.ALEKSANDROV,N.COQUELLE,S.MRAIHI, REMARK 1 AUTH 2 E.MENDOZA-BARBERA,M.FIELD,D.MADERN REMARK 1 TITL SAMPLING THE CONFORMATIONAL ENERGY LANDSCAPE OF A REMARK 1 TITL 2 HYPERTHERMOPHILIC PROTEIN BY ENGINEERING KEY SUBSTITUTIONS. REMARK 1 REF MOL.BIOL.EVOL. V. 29 1683 2012 REMARK 1 REFN ISSN 0737-4038 REMARK 1 PMID 22319152 REMARK 1 DOI 10.1093/MOLBEV/MSS015 REMARK 1 REFERENCE 2 REMARK 1 AUTH N.COQUELLE,R.TALON,D.H.JUERS,E.GIRARD,R.KAHN,D.MADERN REMARK 1 TITL GRADUAL ADAPTIVE CHANGES OF A PROTEIN FACING HIGH SALT REMARK 1 TITL 2 CONCENTRATIONS. REMARK 1 REF J.MOL.BIOL. V. 404 493 2010 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 20888835 REMARK 1 DOI 10.1016/J.JMB.2010.09.055 REMARK 1 REFERENCE 3 REMARK 1 AUTH E.FIORAVANTI,F.M.D.VELLIEUX,P.AMARA,D.MADERN,M.WEIK REMARK 1 TITL SPECIFIC RADIATION DAMAGE TO ACIDIC RESIDUES AND ITS REMARK 1 TITL 2 RELATION TO THEIR CHEMICAL AND STRUCTURAL ENVIRONMENT. REMARK 1 REF J.SYNCHROTRON RADIA. V. 14 84 2007 REMARK 1 REFN ISSN 0909-0495 REMARK 1 PMID 17211074 REMARK 1 DOI 10.1107/S0909049506038623 REMARK 1 REFERENCE 4 REMARK 1 AUTH A.IRIMIA,C.EBEL,D.MADERN,S.B.RICHARD,L.W.COSENZA,G.ZACCAI, REMARK 1 AUTH 2 F.M.D.VELLIEUX REMARK 1 TITL THE OLIGOMERIC STATES OF HALOARCULA MARISMORTUI MALATE REMARK 1 TITL 2 DEHYDROGENASE ARE MODULATED BY SOLVENT COMPONENTS AS SHOWN REMARK 1 TITL 3 BY CRYSTALLOGRAPHIC AND BIOCHEMICAL STUDIES. REMARK 1 REF J.MOL.BIOL. V. 326 859 2003 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 12581646 REMARK 1 DOI 10.1016/S0022-2836(02)01450-X REMARK 1 REFERENCE 5 REMARK 1 AUTH E.GIRARD,L.CHANTALAT,J.VICAT,R.KAHN REMARK 1 TITL GD-HPDO3A, A COMPLEX TO OBTAIN HIGH-PHASING-POWER HEAVY-ATOM REMARK 1 TITL 2 DERIVATIVES FOR SAD AND MAD EXPERIMENTS: RESULTS WITH REMARK 1 TITL 3 TETRAGONAL HEN EGG-WHITE LYSOZYME. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 58 1 2002 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 11752774 REMARK 1 DOI 10.1107/S0907444901016444 REMARK 1 REFERENCE 6 REMARK 1 AUTH R.TALON,R.KAHN,M.A.DURA,O.MAURY,F.M.D.VELLIEUX,B.FRANZETTI, REMARK 1 AUTH 2 E.GIRARD REMARK 1 TITL USING LANTHANOID COMPLEXES TO PHASE LARGE MACROMOLECULAR REMARK 1 TITL 2 ASSEMBLIES. REMARK 1 REF J.SYNCHROTRON RADIA. V. 18 74 2011 REMARK 1 REFN ISSN 0909-0495 REMARK 1 PMID 21169697 REMARK 1 DOI 10.1107/S0909049510036824 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.9 REMARK 3 NUMBER OF REFLECTIONS : 67827 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3433 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.7023 - 4.9439 0.84 2515 133 0.1673 0.2152 REMARK 3 2 4.9439 - 3.9343 0.88 2509 142 0.1317 0.1448 REMARK 3 3 3.9343 - 3.4400 0.89 2511 141 0.1394 0.1646 REMARK 3 4 3.4400 - 3.1268 0.90 2551 145 0.1430 0.1817 REMARK 3 5 3.1268 - 2.9035 0.91 2585 137 0.1467 0.2180 REMARK 3 6 2.9035 - 2.7328 0.92 2573 131 0.1488 0.1961 REMARK 3 7 2.7328 - 2.5962 0.92 2554 148 0.1395 0.1817 REMARK 3 8 2.5962 - 2.4834 0.93 2604 134 0.1364 0.1720 REMARK 3 9 2.4834 - 2.3880 0.93 2608 149 0.1424 0.2069 REMARK 3 10 2.3880 - 2.3057 0.93 2553 164 0.1628 0.2367 REMARK 3 11 2.3057 - 2.2337 0.86 2424 118 0.2813 0.3636 REMARK 3 12 2.2337 - 2.1700 0.87 2405 152 0.2263 0.2306 REMARK 3 13 2.1700 - 2.1129 0.94 2648 128 0.1607 0.1936 REMARK 3 14 2.1129 - 2.0614 0.94 2604 154 0.1486 0.1944 REMARK 3 15 2.0614 - 2.0146 0.94 2652 127 0.1497 0.1816 REMARK 3 16 2.0146 - 1.9718 0.94 2597 135 0.1595 0.2020 REMARK 3 17 1.9718 - 1.9324 0.92 2597 121 0.2008 0.2368 REMARK 3 18 1.9324 - 1.8959 0.89 2462 130 0.3458 0.4079 REMARK 3 19 1.8959 - 1.8621 0.91 2526 124 0.2485 0.3237 REMARK 3 20 1.8621 - 1.8305 0.95 2677 133 0.1919 0.2422 REMARK 3 21 1.8305 - 1.8010 0.95 2617 147 0.1751 0.2257 REMARK 3 22 1.8010 - 1.7733 0.96 2666 137 0.1764 0.2531 REMARK 3 23 1.7733 - 1.7473 0.96 2693 135 0.1790 0.2499 REMARK 3 24 1.7473 - 1.7227 0.96 2649 135 0.1839 0.2439 REMARK 3 25 1.7227 - 1.6994 0.94 2614 133 0.2059 0.2782 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.540 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 4834 REMARK 3 ANGLE : 1.290 6574 REMARK 3 CHIRALITY : 0.082 781 REMARK 3 PLANARITY : 0.006 854 REMARK 3 DIHEDRAL : 13.531 1826 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:78) REMARK 3 ORIGIN FOR THE GROUP (A): -21.5382 29.6392 5.2104 REMARK 3 T TENSOR REMARK 3 T11: 0.1772 T22: 0.1622 REMARK 3 T33: 0.2080 T12: -0.0063 REMARK 3 T13: -0.0052 T23: -0.0275 REMARK 3 L TENSOR REMARK 3 L11: 1.6562 L22: 0.4417 REMARK 3 L33: 0.9708 L12: 0.1176 REMARK 3 L13: -1.0492 L23: -0.3802 REMARK 3 S TENSOR REMARK 3 S11: 0.0050 S12: 0.0283 S13: -0.0896 REMARK 3 S21: -0.0660 S22: 0.0205 S23: 0.0675 REMARK 3 S31: 0.0885 S32: 0.0125 S33: -0.0220 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 79:92) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0795 23.3100 5.9523 REMARK 3 T TENSOR REMARK 3 T11: 0.4376 T22: 0.8686 REMARK 3 T33: 0.8876 T12: 0.2247 REMARK 3 T13: 0.0109 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 0.4535 L22: 2.0401 REMARK 3 L33: 3.5993 L12: 0.6056 REMARK 3 L13: 0.0686 L23: 0.5485 REMARK 3 S TENSOR REMARK 3 S11: 0.3589 S12: -0.7695 S13: -0.3639 REMARK 3 S21: 0.4757 S22: 0.0229 S23: -0.3198 REMARK 3 S31: 0.1939 S32: 0.0159 S33: -0.2892 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 93:193) REMARK 3 ORIGIN FOR THE GROUP (A): -3.8036 40.2545 5.8699 REMARK 3 T TENSOR REMARK 3 T11: 0.1262 T22: 0.1331 REMARK 3 T33: 0.1371 T12: 0.0203 REMARK 3 T13: 0.0237 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 0.7483 L22: 1.0503 REMARK 3 L33: 1.3466 L12: 0.4064 REMARK 3 L13: 0.1987 L23: 0.6682 REMARK 3 S TENSOR REMARK 3 S11: -0.0353 S12: 0.1225 S13: -0.1397 REMARK 3 S21: -0.1204 S22: 0.0412 S23: -0.1534 REMARK 3 S31: 0.0718 S32: 0.0994 S33: -0.0129 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 194:304) REMARK 3 ORIGIN FOR THE GROUP (A): -0.0186 43.7834 8.3169 REMARK 3 T TENSOR REMARK 3 T11: 0.1237 T22: 0.1311 REMARK 3 T33: 0.1553 T12: 0.0116 REMARK 3 T13: 0.0343 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 0.9762 L22: 0.7576 REMARK 3 L33: 1.1215 L12: -0.0551 REMARK 3 L13: 0.2211 L23: -0.1156 REMARK 3 S TENSOR REMARK 3 S11: -0.0619 S12: 0.0535 S13: -0.0605 REMARK 3 S21: -0.0955 S22: 0.0002 S23: -0.1412 REMARK 3 S31: 0.0446 S32: 0.1325 S33: 0.0648 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 305:309) REMARK 3 ORIGIN FOR THE GROUP (A): 8.3309 28.3790 -6.8034 REMARK 3 T TENSOR REMARK 3 T11: 0.4460 T22: 0.3027 REMARK 3 T33: 0.6330 T12: 0.0066 REMARK 3 T13: 0.1740 T23: -0.0923 REMARK 3 L TENSOR REMARK 3 L11: 2.7370 L22: 1.0122 REMARK 3 L33: 0.9936 L12: -1.6506 REMARK 3 L13: 0.2243 L23: -0.2545 REMARK 3 S TENSOR REMARK 3 S11: -0.2267 S12: 0.3952 S13: -0.8088 REMARK 3 S21: -0.4452 S22: -0.1199 S23: 0.0032 REMARK 3 S31: 0.6090 S32: 0.0469 S33: 0.3033 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN D AND RESID 1:78) REMARK 3 ORIGIN FOR THE GROUP (A): -36.0174 57.4859 29.5986 REMARK 3 T TENSOR REMARK 3 T11: 0.1490 T22: 0.1459 REMARK 3 T33: 0.1249 T12: 0.0051 REMARK 3 T13: 0.0259 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 1.2711 L22: 1.1722 REMARK 3 L33: 0.8642 L12: 0.5280 REMARK 3 L13: 0.3708 L23: 0.6527 REMARK 3 S TENSOR REMARK 3 S11: 0.0050 S12: -0.1211 S13: 0.0273 REMARK 3 S21: 0.1177 S22: -0.0188 S23: 0.0878 REMARK 3 S31: -0.0054 S32: -0.0941 S33: 0.0073 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN D AND RESID 79:92) REMARK 3 ORIGIN FOR THE GROUP (A): -28.5794 85.8362 27.8852 REMARK 3 T TENSOR REMARK 3 T11: 0.6618 T22: 0.3630 REMARK 3 T33: 0.5954 T12: 0.0223 REMARK 3 T13: -0.0740 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 3.1352 L22: 5.2603 REMARK 3 L33: 1.6229 L12: 2.2760 REMARK 3 L13: -1.0015 L23: 0.0669 REMARK 3 S TENSOR REMARK 3 S11: -0.1246 S12: 0.8771 S13: 0.7636 REMARK 3 S21: -1.4539 S22: 0.3414 S23: 0.4349 REMARK 3 S31: -0.5760 S32: 0.1526 S33: -0.1733 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN D AND RESID 93:193) REMARK 3 ORIGIN FOR THE GROUP (A): -18.1109 67.3091 26.1349 REMARK 3 T TENSOR REMARK 3 T11: 0.1269 T22: 0.1153 REMARK 3 T33: 0.1300 T12: 0.0078 REMARK 3 T13: -0.0184 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 0.8934 L22: 0.6274 REMARK 3 L33: 1.2287 L12: -0.0765 REMARK 3 L13: -0.4370 L23: 0.1976 REMARK 3 S TENSOR REMARK 3 S11: -0.0123 S12: -0.0922 S13: 0.1396 REMARK 3 S21: 0.0746 S22: 0.0016 S23: -0.0191 REMARK 3 S31: -0.0956 S32: -0.0379 S33: 0.0027 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN D AND RESID 194:304) REMARK 3 ORIGIN FOR THE GROUP (A): -13.3814 68.7957 23.5414 REMARK 3 T TENSOR REMARK 3 T11: 0.1150 T22: 0.1042 REMARK 3 T33: 0.1410 T12: -0.0022 REMARK 3 T13: -0.0080 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: 0.4808 L22: 0.6311 REMARK 3 L33: 1.0732 L12: 0.0881 REMARK 3 L13: 0.1096 L23: -0.3242 REMARK 3 S TENSOR REMARK 3 S11: -0.0264 S12: -0.0724 S13: 0.1015 REMARK 3 S21: 0.0448 S22: -0.0335 S23: -0.0823 REMARK 3 S31: -0.1056 S32: 0.0545 S33: 0.0627 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN D AND RESID 305:309) REMARK 3 ORIGIN FOR THE GROUP (A): -20.7657 84.4597 39.4394 REMARK 3 T TENSOR REMARK 3 T11: 0.3689 T22: 0.2679 REMARK 3 T33: 0.4095 T12: 0.0156 REMARK 3 T13: 0.0013 T23: -0.1570 REMARK 3 L TENSOR REMARK 3 L11: 2.5873 L22: 2.7177 REMARK 3 L33: 2.2833 L12: 2.4744 REMARK 3 L13: -0.4813 L23: 0.0564 REMARK 3 S TENSOR REMARK 3 S11: 0.3179 S12: -0.5301 S13: 0.7794 REMARK 3 S21: 0.4305 S22: 0.0097 S23: 0.0256 REMARK 3 S31: -0.4401 S32: -0.1729 S33: -0.3198 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ONLY THE A-D PROTEIN HOMODIMER WAS REMARK 3 FOUND INSIDE THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT. REMARK 4 REMARK 4 4CL3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1290059202. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-OCT-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTALS MONOCHROMATOR REMARK 200 OPTICS : TWO MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 10-05-2010 REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.16 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68673 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 19.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4-14% PEG 400, 0.1 M SODIUM ACETATE PH REMARK 280 4.6, 0.04 M CADMIUM ACETATE, 293 K, 1-3 DAYS REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.18867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 68.37733 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 68.37733 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 34.18867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 34.18867 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CD CD A1312 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2017 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2041 LIES ON A SPECIAL POSITION. REMARK 375 HOH D2030 LIES ON A SPECIAL POSITION. REMARK 375 HOH D2034 LIES ON A SPECIAL POSITION. REMARK 375 HOH D2183 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN D 120 O HOH D 2242 1.96 REMARK 500 O HOH A 2002 O HOH A 2003 2.06 REMARK 500 O HOH D 2303 O HOH D 2304 2.09 REMARK 500 O HOH A 2234 O HOH A 2245 2.10 REMARK 500 O HOH A 2434 O HOH A 2437 2.11 REMARK 500 O HOH D 2037 O HOH D 2094 2.12 REMARK 500 O HOH D 2288 O HOH D 2447 2.13 REMARK 500 O HOH A 2122 O HOH A 2326 2.14 REMARK 500 O THR A 77 O HOH A 2157 2.14 REMARK 500 O HOH D 2025 O HOH D 2039 2.14 REMARK 500 O HOH A 2010 O HOH A 2078 2.15 REMARK 500 O HOH A 2358 O HOH A 2360 2.16 REMARK 500 O HOH D 2259 O HOH D 2260 2.16 REMARK 500 O HOH A 2316 O HOH D 2333 2.17 REMARK 500 O HOH A 2346 O HOH A 2347 2.18 REMARK 500 O4 PEG A 1320 O HOH A 2362 2.19 REMARK 500 O HOH A 2212 O HOH A 2213 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2018 O HOH A 2018 6555 2.10 REMARK 500 O HOH A 2133 O HOH D 2287 2665 2.15 REMARK 500 O HOH D 2026 O HOH D 2370 6555 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 10 35.91 -95.44 REMARK 500 ARG A 82 -2.01 47.53 REMARK 500 LYS A 83 77.47 54.70 REMARK 500 VAL A 118 49.81 -140.93 REMARK 500 ALA A 144 -50.28 -147.37 REMARK 500 PHE A 185 50.50 -100.44 REMARK 500 LYS A 221 -29.34 69.87 REMARK 500 TYR A 226 -28.91 -143.11 REMARK 500 LYS D 83 -176.71 65.96 REMARK 500 VAL D 118 54.79 -144.17 REMARK 500 VAL D 118 49.56 -141.50 REMARK 500 ALA D 144 -49.52 -148.82 REMARK 500 PHE D 185 50.77 -100.40 REMARK 500 LYS D 221 -54.74 77.83 REMARK 500 TYR D 226 -30.96 -145.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2025 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH A2028 DISTANCE = 7.13 ANGSTROMS REMARK 525 HOH A2074 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH A2116 DISTANCE = 6.70 ANGSTROMS REMARK 525 HOH A2135 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A2136 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A2152 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH A2153 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH A2175 DISTANCE = 6.75 ANGSTROMS REMARK 525 HOH A2197 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH A2205 DISTANCE = 6.95 ANGSTROMS REMARK 525 HOH A2277 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH A2475 DISTANCE = 7.01 ANGSTROMS REMARK 525 HOH A2476 DISTANCE = 7.65 ANGSTROMS REMARK 525 HOH A2478 DISTANCE = 6.96 ANGSTROMS REMARK 525 HOH A2479 DISTANCE = 8.31 ANGSTROMS REMARK 525 HOH A2480 DISTANCE = 8.38 ANGSTROMS REMARK 525 HOH A2481 DISTANCE = 9.10 ANGSTROMS REMARK 525 HOH A2482 DISTANCE = 7.39 ANGSTROMS REMARK 525 HOH A2483 DISTANCE = 6.53 ANGSTROMS REMARK 525 HOH A2484 DISTANCE = 7.83 ANGSTROMS REMARK 525 HOH D2027 DISTANCE = 7.41 ANGSTROMS REMARK 525 HOH D2028 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH D2045 DISTANCE = 6.66 ANGSTROMS REMARK 525 HOH D2046 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH D2066 DISTANCE = 6.64 ANGSTROMS REMARK 525 HOH D2067 DISTANCE = 6.12 ANGSTROMS REMARK 525 HOH D2074 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH D2089 DISTANCE = 6.76 ANGSTROMS REMARK 525 HOH D2114 DISTANCE = 6.34 ANGSTROMS REMARK 525 HOH D2115 DISTANCE = 6.22 ANGSTROMS REMARK 525 HOH D2141 DISTANCE = 7.19 ANGSTROMS REMARK 525 HOH D2144 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH D2161 DISTANCE = 7.11 ANGSTROMS REMARK 525 HOH D2166 DISTANCE = 6.01 ANGSTROMS REMARK 525 HOH D2208 DISTANCE = 6.47 ANGSTROMS REMARK 525 HOH D2213 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH D2214 DISTANCE = 7.59 ANGSTROMS REMARK 525 HOH D2218 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH D2295 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH D2452 DISTANCE = 7.68 ANGSTROMS REMARK 525 HOH D2454 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH D2456 DISTANCE = 7.78 ANGSTROMS REMARK 525 HOH D2457 DISTANCE = 7.39 ANGSTROMS REMARK 525 HOH D2458 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH D2461 DISTANCE = 8.19 ANGSTROMS REMARK 525 HOH D2465 DISTANCE = 8.22 ANGSTROMS REMARK 525 HOH D2468 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH D2471 DISTANCE = 6.62 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1310 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2466 O REMARK 620 2 HOH A2289 O 112.9 REMARK 620 3 GLU A 165 OE1 113.5 131.0 REMARK 620 4 GLU A 165 OE2 165.1 81.4 51.6 REMARK 620 5 HOH A2284 O 80.5 89.1 83.7 95.9 REMARK 620 6 HOH A2285 O 57.5 167.9 60.7 108.9 96.0 REMARK 620 7 HOH A2288 O 95.9 84.7 105.3 89.6 171.0 88.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1311 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ACT A1317 OXT REMARK 620 2 HOH A2057 O 88.4 REMARK 620 3 ASP A 33 OD2 81.7 88.5 REMARK 620 4 ACT A1317 O 46.3 134.0 92.0 REMARK 620 5 HOH A2467 O 80.8 94.0 162.3 73.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1312 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2170 O REMARK 620 2 ASP A 90 OD1 91.9 REMARK 620 3 ASP A 90 OD1 70.1 138.8 REMARK 620 4 HOH A2170 O 123.3 69.6 89.3 REMARK 620 5 HOH A2468 O 48.0 112.2 83.4 170.3 REMARK 620 6 HOH A2166 O 92.5 127.6 91.1 141.7 45.3 REMARK 620 7 HOH A2166 O 144.9 91.7 124.5 90.5 98.9 58.4 REMARK 620 8 HOH A2468 O 169.8 82.9 108.3 46.7 142.2 97.6 44.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1313 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH D2289 O REMARK 620 2 HOH A2274 O 89.6 REMARK 620 3 GLU A 159 OE1 93.4 90.5 REMARK 620 4 GLU D 159 OE2 102.1 137.2 128.9 REMARK 620 5 HOH A2272 O 177.6 88.3 85.6 80.2 REMARK 620 6 GLU D 159 OE1 91.6 83.9 172.4 55.2 89.1 REMARK 620 7 GLU A 159 OE2 100.5 142.1 52.7 76.5 80.7 131.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1314 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2469 O REMARK 620 2 HOH A2428 O 86.2 REMARK 620 3 GLU A 281 O 157.9 85.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD D1310 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 165 OE1 REMARK 620 2 HOH D2447 O 138.0 REMARK 620 3 HOH A2383 O 100.5 103.1 REMARK 620 4 HOH D2096 O 84.5 72.9 175.1 REMARK 620 5 HOH A2382 O 129.7 85.1 89.0 87.8 REMARK 620 6 HOH D2297 O 85.3 59.7 92.1 88.3 144.1 REMARK 620 7 GLU D 165 OE2 53.0 158.9 89.5 93.5 78.2 137.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD D1311 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ACT D1318 OXT REMARK 620 2 ACT D1318 O 45.9 REMARK 620 3 ASP D 33 OD2 87.8 73.9 REMARK 620 4 ASP D 33 OD1 105.5 65.3 43.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD D1312 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 90 OD1 REMARK 620 2 GLU D 89 OE2 106.0 REMARK 620 3 HOH D2183 O 73.5 161.6 REMARK 620 4 HOH D2183 O 73.7 160.9 0.7 REMARK 620 5 ASP D 90 OD1 144.3 109.7 73.1 73.1 REMARK 620 6 GLU D 89 OE2 98.5 66.9 131.5 132.3 94.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD D1313 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 277 OE2 REMARK 620 2 ASP D 243 OD1 91.5 REMARK 620 3 HOH D2338 O 82.8 101.2 REMARK 620 4 GLU D 277 OE1 53.8 109.9 125.6 REMARK 620 5 ASP D 243 OD2 135.6 49.8 84.7 148.8 REMARK 620 6 ASP D 200 OD2 140.6 104.2 127.4 86.9 78.0 REMARK 620 7 ASP D 200 OD1 114.6 153.8 85.6 85.3 106.6 53.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD D1314 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 36 OE2 REMARK 620 2 GLU D 36 OE1 50.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD D1315 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 177 OD2 REMARK 620 2 ASP D 177 OD1 49.7 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 1310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 1311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 1312 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 1313 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 1314 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1315 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1316 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1317 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1318 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1319 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1320 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD D 1310 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD D 1311 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD D 1312 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD D 1313 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD D 1314 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD D 1315 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT D 1316 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT D 1317 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT D 1318 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG D 1319 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BGU RELATED DB: PDB REMARK 900 1.50 A RESOLUTION STRUCTURE OF THE MALATE DEHYDROGENASE FROM REMARK 900 HALOFERAX VOLCANII REMARK 900 RELATED ID: 4BGV RELATED DB: PDB REMARK 900 1.8 A RESOLUTION STRUCTURE OF THE MALATE DEHYDROGENASE FROM REMARK 900 PICROPHILUS TORRIDUS IN ITS APO FORM DBREF 4CL3 A 1 309 UNP B9LLP6 MDH_CHLSY 1 309 DBREF 4CL3 D 1 309 UNP B9LLP6 MDH_CHLSY 1 309 SEQRES 1 A 309 MET ARG LYS LYS ILE SER ILE ILE GLY ALA GLY PHE VAL SEQRES 2 A 309 GLY SER THR THR ALA HIS TRP LEU ALA ALA LYS GLU LEU SEQRES 3 A 309 GLY ASP ILE VAL LEU LEU ASP ILE VAL GLU GLY VAL PRO SEQRES 4 A 309 GLN GLY LYS ALA LEU ASP LEU TYR GLU ALA SER PRO ILE SEQRES 5 A 309 GLU GLY PHE ASP VAL ARG VAL THR GLY THR ASN ASN TYR SEQRES 6 A 309 ALA ASP THR ALA ASN SER ASP VAL ILE VAL VAL THR SER SEQRES 7 A 309 GLY ALA PRO ARG LYS PRO GLY MET SER ARG GLU ASP LEU SEQRES 8 A 309 ILE LYS VAL ASN ALA ASP ILE THR ARG ALA CYS ILE SER SEQRES 9 A 309 GLN ALA ALA PRO LEU SER PRO ASN ALA VAL ILE ILE MET SEQRES 10 A 309 VAL ASN ASN PRO LEU ASP ALA MET THR TYR LEU ALA ALA SEQRES 11 A 309 GLU VAL SER GLY PHE PRO LYS GLU ARG VAL ILE GLY GLN SEQRES 12 A 309 ALA GLY VAL LEU ASP ALA ALA ARG TYR ARG THR PHE ILE SEQRES 13 A 309 ALA MET GLU ALA GLY VAL SER VAL GLU ASP VAL GLN ALA SEQRES 14 A 309 MET LEU MET GLY GLY HIS GLY ASP GLU MET VAL PRO LEU SEQRES 15 A 309 PRO ARG PHE SER THR ILE SER GLY ILE PRO VAL SER GLU SEQRES 16 A 309 PHE ILE ALA PRO ASP ARG LEU ALA GLN ILE VAL GLU ARG SEQRES 17 A 309 THR ARG LYS GLY GLY GLY GLU ILE VAL ASN LEU LEU LYS SEQRES 18 A 309 THR GLY SER ALA TYR TYR ALA PRO ALA ALA ALA THR ALA SEQRES 19 A 309 GLN MET VAL GLU ALA VAL LEU LYS ASP LYS LYS ARG VAL SEQRES 20 A 309 MET PRO VAL ALA ALA TYR LEU THR GLY GLN TYR GLY LEU SEQRES 21 A 309 ASN ASP ILE TYR PHE GLY VAL PRO VAL ILE LEU GLY ALA SEQRES 22 A 309 GLY GLY VAL GLU LYS ILE LEU GLU LEU PRO LEU ASN GLU SEQRES 23 A 309 GLU GLU MET ALA LEU LEU ASN ALA SER ALA LYS ALA VAL SEQRES 24 A 309 ARG ALA THR LEU ASP THR LEU LYS SER LEU SEQRES 1 D 309 MET ARG LYS LYS ILE SER ILE ILE GLY ALA GLY PHE VAL SEQRES 2 D 309 GLY SER THR THR ALA HIS TRP LEU ALA ALA LYS GLU LEU SEQRES 3 D 309 GLY ASP ILE VAL LEU LEU ASP ILE VAL GLU GLY VAL PRO SEQRES 4 D 309 GLN GLY LYS ALA LEU ASP LEU TYR GLU ALA SER PRO ILE SEQRES 5 D 309 GLU GLY PHE ASP VAL ARG VAL THR GLY THR ASN ASN TYR SEQRES 6 D 309 ALA ASP THR ALA ASN SER ASP VAL ILE VAL VAL THR SER SEQRES 7 D 309 GLY ALA PRO ARG LYS PRO GLY MET SER ARG GLU ASP LEU SEQRES 8 D 309 ILE LYS VAL ASN ALA ASP ILE THR ARG ALA CYS ILE SER SEQRES 9 D 309 GLN ALA ALA PRO LEU SER PRO ASN ALA VAL ILE ILE MET SEQRES 10 D 309 VAL ASN ASN PRO LEU ASP ALA MET THR TYR LEU ALA ALA SEQRES 11 D 309 GLU VAL SER GLY PHE PRO LYS GLU ARG VAL ILE GLY GLN SEQRES 12 D 309 ALA GLY VAL LEU ASP ALA ALA ARG TYR ARG THR PHE ILE SEQRES 13 D 309 ALA MET GLU ALA GLY VAL SER VAL GLU ASP VAL GLN ALA SEQRES 14 D 309 MET LEU MET GLY GLY HIS GLY ASP GLU MET VAL PRO LEU SEQRES 15 D 309 PRO ARG PHE SER THR ILE SER GLY ILE PRO VAL SER GLU SEQRES 16 D 309 PHE ILE ALA PRO ASP ARG LEU ALA GLN ILE VAL GLU ARG SEQRES 17 D 309 THR ARG LYS GLY GLY GLY GLU ILE VAL ASN LEU LEU LYS SEQRES 18 D 309 THR GLY SER ALA TYR TYR ALA PRO ALA ALA ALA THR ALA SEQRES 19 D 309 GLN MET VAL GLU ALA VAL LEU LYS ASP LYS LYS ARG VAL SEQRES 20 D 309 MET PRO VAL ALA ALA TYR LEU THR GLY GLN TYR GLY LEU SEQRES 21 D 309 ASN ASP ILE TYR PHE GLY VAL PRO VAL ILE LEU GLY ALA SEQRES 22 D 309 GLY GLY VAL GLU LYS ILE LEU GLU LEU PRO LEU ASN GLU SEQRES 23 D 309 GLU GLU MET ALA LEU LEU ASN ALA SER ALA LYS ALA VAL SEQRES 24 D 309 ARG ALA THR LEU ASP THR LEU LYS SER LEU HET CD A1310 1 HET CD A1311 1 HET CD A1312 1 HET CD A1313 1 HET CD A1314 1 HET CL A1315 1 HET ACT A1316 4 HET ACT A1317 4 HET PEG A1318 7 HET PEG A1319 7 HET PEG A1320 14 HET CD D1310 1 HET CD D1311 1 HET CD D1312 1 HET CD D1313 1 HET CD D1314 1 HET CD D1315 1 HET ACT D1316 4 HET ACT D1317 4 HET ACT D1318 4 HET PEG D1319 7 HETNAM CD CADMIUM ION HETNAM CL CHLORIDE ION HETNAM ACT ACETATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 3 CD 11(CD 2+) FORMUL 8 CL CL 1- FORMUL 9 ACT 5(C2 H3 O2 1-) FORMUL 11 PEG 4(C4 H10 O3) FORMUL 24 HOH *945(H2 O) HELIX 1 1 GLY A 11 LYS A 24 1 14 HELIX 2 2 GLY A 37 ALA A 49 1 13 HELIX 3 3 ALA A 49 GLY A 54 1 6 HELIX 4 4 ASN A 64 ALA A 69 5 6 HELIX 5 5 SER A 87 ALA A 107 1 21 HELIX 6 6 PRO A 108 SER A 110 5 3 HELIX 7 7 PRO A 121 GLY A 134 1 14 HELIX 8 8 PRO A 136 GLU A 138 5 3 HELIX 9 9 ALA A 144 GLY A 161 1 18 HELIX 10 10 SER A 163 GLU A 165 5 3 HELIX 11 11 HIS A 175 ASP A 177 5 3 HELIX 12 12 LEU A 182 ARG A 184 5 3 HELIX 13 13 SER A 194 PHE A 196 5 3 HELIX 14 14 ALA A 198 LYS A 211 1 14 HELIX 15 15 LYS A 211 LYS A 221 1 11 HELIX 16 16 TYR A 226 LYS A 242 1 17 HELIX 17 17 GLN A 257 GLY A 259 5 3 HELIX 18 18 ASN A 285 SER A 308 1 24 HELIX 19 19 GLY D 11 LYS D 24 1 14 HELIX 20 20 GLY D 37 ALA D 49 1 13 HELIX 21 21 ALA D 49 GLY D 54 1 6 HELIX 22 22 ASN D 64 ALA D 69 5 6 HELIX 23 23 SER D 87 ALA D 107 1 21 HELIX 24 24 PRO D 108 SER D 110 5 3 HELIX 25 25 PRO D 121 GLY D 134 1 14 HELIX 26 26 PRO D 136 GLU D 138 5 3 HELIX 27 27 ALA D 144 GLY D 161 1 18 HELIX 28 28 SER D 163 GLU D 165 5 3 HELIX 29 29 HIS D 175 ASP D 177 5 3 HELIX 30 30 LEU D 182 ARG D 184 5 3 HELIX 31 31 SER D 194 PHE D 196 5 3 HELIX 32 32 ALA D 198 LYS D 211 1 14 HELIX 33 33 LYS D 211 LYS D 221 1 11 HELIX 34 34 TYR D 226 LYS D 242 1 17 HELIX 35 35 GLN D 257 GLY D 259 5 3 HELIX 36 36 ASN D 285 LEU D 309 1 25 SHEET 1 AA 6 VAL A 59 THR A 62 0 SHEET 2 AA 6 ASP A 28 LEU A 32 1 O ILE A 29 N THR A 60 SHEET 3 AA 6 LYS A 4 ILE A 8 1 O ILE A 5 N VAL A 30 SHEET 4 AA 6 VAL A 73 VAL A 76 1 O VAL A 73 N SER A 6 SHEET 5 AA 6 VAL A 114 MET A 117 1 O VAL A 114 N ILE A 74 SHEET 6 AA 6 VAL A 140 GLY A 142 1 O ILE A 141 N MET A 117 SHEET 1 AB 3 VAL A 167 ALA A 169 0 SHEET 2 AB 3 SER A 186 ILE A 188 -1 O THR A 187 N GLN A 168 SHEET 3 AB 3 ILE A 191 PRO A 192 -1 O ILE A 191 N ILE A 188 SHEET 1 AC 2 MET A 172 GLY A 173 0 SHEET 2 AC 2 MET A 179 VAL A 180 -1 O VAL A 180 N MET A 172 SHEET 1 AD 3 ARG A 246 THR A 255 0 SHEET 2 AD 3 ASN A 261 GLY A 272 -1 N ASP A 262 O LEU A 254 SHEET 3 AD 3 GLY A 275 ILE A 279 -1 O GLY A 275 N GLY A 272 SHEET 1 DA 6 VAL D 59 THR D 62 0 SHEET 2 DA 6 ASP D 28 LEU D 32 1 O ILE D 29 N THR D 60 SHEET 3 DA 6 LYS D 4 ILE D 8 1 O ILE D 5 N VAL D 30 SHEET 4 DA 6 VAL D 73 VAL D 76 1 O VAL D 73 N SER D 6 SHEET 5 DA 6 VAL D 114 MET D 117 1 O VAL D 114 N ILE D 74 SHEET 6 DA 6 VAL D 140 GLY D 142 1 O ILE D 141 N MET D 117 SHEET 1 DB 3 VAL D 167 ALA D 169 0 SHEET 2 DB 3 SER D 186 ILE D 188 -1 O THR D 187 N GLN D 168 SHEET 3 DB 3 ILE D 191 PRO D 192 -1 O ILE D 191 N ILE D 188 SHEET 1 DC 2 MET D 172 GLY D 173 0 SHEET 2 DC 2 MET D 179 VAL D 180 -1 O VAL D 180 N MET D 172 SHEET 1 DD 3 ARG D 246 THR D 255 0 SHEET 2 DD 3 ASN D 261 GLY D 272 -1 N ASP D 262 O LEU D 254 SHEET 3 DD 3 GLY D 275 ILE D 279 -1 O GLY D 275 N GLY D 272 LINK CD CD A1310 O HOH A2466 1555 1555 2.70 LINK CD CD A1310 O HOH A2289 1555 1555 2.79 LINK CD CD A1310 OE1 GLU A 165 1555 1555 2.60 LINK CD CD A1310 OE2 GLU A 165 1555 1555 2.43 LINK CD CD A1310 O HOH A2284 1555 1555 2.63 LINK CD CD A1310 O HOH A2285 1555 1555 2.62 LINK CD CD A1310 O HOH A2288 1555 1555 2.39 LINK CD CD A1311 OXT ACT A1317 1555 1555 2.73 LINK CD CD A1311 O HOH A2057 1555 1555 2.58 LINK CD CD A1311 OD2 ASP A 33 1555 1555 2.64 LINK CD CD A1311 O ACT A1317 1555 1555 2.64 LINK CD CD A1311 O HOH A2467 1555 1555 2.96 LINK CD CD A1312 O HOH A2170 1555 4555 3.02 LINK CD CD A1312 OD1 ASP A 90 1555 1555 2.71 LINK CD CD A1312 OD1 ASP A 90 1555 4555 2.76 LINK CD CD A1312 O HOH A2170 1555 1555 3.10 LINK CD CD A1312 O HOH A2468 1555 1555 2.93 LINK CD CD A1312 O HOH A2166 1555 1555 2.85 LINK CD CD A1312 O HOH A2166 1555 4555 2.87 LINK CD CD A1312 O HOH A2468 1555 4555 3.01 LINK CD CD A1313 O HOH D2289 1555 2665 2.46 LINK CD CD A1313 O HOH A2274 1555 1555 2.45 LINK CD CD A1313 OE1 GLU A 159 1555 1555 2.39 LINK CD CD A1313 OE2 GLU D 159 1555 2665 2.42 LINK CD CD A1313 O HOH A2272 1555 1555 2.64 LINK CD CD A1313 OE1 GLU D 159 1555 2665 2.34 LINK CD CD A1313 OE2 GLU A 159 1555 1555 2.54 LINK CD CD A1314 O HOH A2469 1555 1555 2.74 LINK CD CD A1314 O HOH A2428 1555 2665 3.17 LINK CD CD A1314 O GLU A 281 1555 2665 2.61 LINK CD CD D1310 OE1 GLU D 165 1555 1555 2.52 LINK CD CD D1310 O HOH D2447 1555 1555 2.50 LINK CD CD D1310 O HOH A2383 1555 1555 2.48 LINK CD CD D1310 O HOH D2096 1555 6555 2.59 LINK CD CD D1310 O HOH A2382 1555 1555 2.68 LINK CD CD D1310 O HOH D2297 1555 1555 2.51 LINK CD CD D1310 OE2 GLU D 165 1555 1555 2.42 LINK CD CD D1311 OXT ACT D1318 1555 1555 2.73 LINK CD CD D1311 O ACT D1318 1555 1555 2.73 LINK CD CD D1311 OD2 ASP D 33 1555 1555 2.67 LINK CD CD D1311 OD1 ASP D 33 1555 1555 3.16 LINK CD CD D1312 OD1 ASP D 90 1555 5675 2.52 LINK CD CD D1312 OE2 GLU D 89 1555 1555 2.62 LINK CD CD D1312 O HOH D2183 1555 5675 2.62 LINK CD CD D1312 O HOH D2183 1555 1555 2.61 LINK CD CD D1312 OD1 ASP D 90 1555 1555 2.55 LINK CD CD D1312 OE2 GLU D 89 1555 5675 3.04 LINK CD CD D1313 OE2 GLU D 277 1555 3564 2.41 LINK CD CD D1313 OD1 ASP D 243 1555 3564 2.35 LINK CD CD D1313 O HOH D2338 1555 1555 2.39 LINK CD CD D1313 OE1 GLU D 277 1555 3564 2.47 LINK CD CD D1313 OD2 ASP D 243 1555 3564 2.77 LINK CD CD D1313 OD2 ASP D 200 1555 1555 2.40 LINK CD CD D1313 OD1 ASP D 200 1555 1555 2.41 LINK CD CD D1314 OE2 GLU D 36 1555 1555 2.54 LINK CD CD D1314 OE1 GLU D 36 1555 1555 2.69 LINK CD CD D1315 OD2 ASP D 177 1555 1555 2.62 LINK CD CD D1315 OD1 ASP D 177 1555 1555 2.63 CISPEP 1 ASN A 120 PRO A 121 0 -4.09 CISPEP 2 ASN D 120 PRO D 121 0 -6.76 SITE 1 AC1 6 GLU A 165 HOH A2284 HOH A2285 HOH A2288 SITE 2 AC1 6 HOH A2289 HOH A2466 SITE 1 AC2 4 ASP A 33 ACT A1317 HOH A2057 HOH A2467 SITE 1 AC3 4 ASP A 90 HOH A2166 HOH A2170 HOH A2468 SITE 1 AC4 6 GLU A 159 ARG A 201 HOH A2272 HOH A2274 SITE 2 AC4 6 GLU D 159 HOH D2289 SITE 1 AC5 2 GLU A 281 HOH A2469 SITE 1 AC6 2 ARG A 208 HOH A2034 SITE 1 AC7 6 PRO A 121 ASP A 123 ALA A 124 GLU A 178 SITE 2 AC7 6 THR A 302 HOH A2232 SITE 1 AC8 7 ILE A 8 GLY A 9 ASP A 33 ILE A 34 SITE 2 AC8 7 TYR A 65 SER A 78 CD A1311 SITE 1 AC9 11 PHE D 12 LEU D 220 THR D 222 GLY D 223 SITE 2 AC9 11 SER D 224 TYR D 226 PEG D1319 HOH D2472 SITE 3 AC9 11 HOH D2473 HOH D2474 HOH D2475 SITE 1 BC1 3 ARG A 100 GLU A 131 VAL A 132 SITE 1 BC2 5 GLY A 214 VAL A 217 ASN A 218 HOH A2360 SITE 2 BC2 5 HOH A2362 SITE 1 BC3 6 HOH A2382 HOH A2383 GLU D 165 HOH D2096 SITE 2 BC3 6 HOH D2297 HOH D2447 SITE 1 BC4 3 ASP D 33 ACT D1318 PEG D1319 SITE 1 BC5 3 GLU D 89 ASP D 90 HOH D2183 SITE 1 BC6 4 ASP D 200 ASP D 243 GLU D 277 HOH D2338 SITE 1 BC7 1 GLU D 36 SITE 1 BC8 1 ASP D 177 SITE 1 BC9 7 HOH A2272 HOH A2279 GLU D 159 ILE D 197 SITE 2 BC9 7 ALA D 198 ARG D 201 HOH D2339 SITE 1 CC1 6 LYS D 24 GLU D 53 ALA D 234 GLN D 235 SITE 2 CC1 6 HOH D2033 HOH D2092 SITE 1 CC2 7 ILE D 8 GLY D 9 ASP D 33 ILE D 34 SITE 2 CC2 7 SER D 78 CD D1311 HOH D2449 SITE 1 CC3 10 PEG A1318 ALA D 10 GLY D 11 ASP D 33 SITE 2 CC3 10 VAL D 38 LYS D 42 CD D1311 HOH D2075 SITE 3 CC3 10 HOH D2448 HOH D2450 CRYST1 106.226 106.226 102.566 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009414 0.005435 0.000000 0.00000 SCALE2 0.000000 0.010870 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009750 0.00000