HEADER TRANSFERASE 16-JAN-14 4CMF TITLE THE (R)-SELECTIVE TRANSAMINASE FROM NECTRIA HAEMATOCOCCA WITH TITLE 2 INHIBITOR BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINOTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.6.1.42; COMPND 5 OTHER_DETAILS: PXG B1 IS AN ADDUCT BETWEEN PLP AND GABACULINE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NECTRIA HAEMATOCOCCA MPVI; SOURCE 3 ORGANISM_TAXID: 70791 KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.SAYER,M.ISUPOV,R.J.MARTINEZ-TORRES,N.RICHTER,H.C.HAILES,J.WARD, AUTHOR 2 J.LITTLECHILD REVDAT 3 20-DEC-23 4CMF 1 REMARK SHEET REVDAT 2 14-MAY-14 4CMF 1 JRNL REVDAT 1 26-MAR-14 4CMF 0 JRNL AUTH C.SAYER,R.J.MARTINEZ-TORRES,N.RICHTER,M.N.ISUPOV,H.C.HAILES, JRNL AUTH 2 J.A.LITTLECHILD,J.M.WARD JRNL TITL THE SUBSTRATE SPECIFICITY, ENANTIOSELECTIVITY AND STRUCTURE JRNL TITL 2 OF THE (R)-SELECTIVE AMINE:PYRUVATE TRANSAMINASE FROM JRNL TITL 3 NECTRIA HAEMATOCOCCA. JRNL REF FEBS J. V. 281 2240 2014 JRNL REFN ISSN 1742-464X JRNL PMID 24618038 JRNL DOI 10.1111/FEBS.12778 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 61506 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.154 REMARK 3 R VALUE (WORKING SET) : 0.153 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3283 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4490 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.2450 REMARK 3 BIN FREE R VALUE SET COUNT : 253 REMARK 3 BIN FREE R VALUE : 0.2550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2548 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 38 REMARK 3 SOLVENT ATOMS : 508 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.34000 REMARK 3 B22 (A**2) : -0.62000 REMARK 3 B33 (A**2) : 1.97000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.061 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.064 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.047 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.317 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.968 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2886 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3956 ; 1.435 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 382 ; 5.838 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 134 ;29.824 ;23.358 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 528 ;12.741 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;17.375 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 433 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2221 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1365 ; 2.548 ; 4.088 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1718 ; 3.421 ; 6.845 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1520 ; 3.380 ; 4.750 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 4CMF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1290059477. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64789 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 39.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 1.03000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 4CMD REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 30.86500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.17000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 65.12500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 30.86500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.17000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 65.12500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 30.86500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 50.17000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 65.12500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 30.86500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 50.17000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 65.12500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 48130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -115.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -100.34000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 -61.73000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 -100.34000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 -61.73000 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2400 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2406 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2266 O HOH A 2267 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2341 O HOH A 2341 2445 1.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 2 74.68 76.97 REMARK 500 ALA A 2 -53.99 -170.12 REMARK 500 HIS A 53 24.69 -143.95 REMARK 500 THR A 211 -104.14 -118.03 REMARK 500 LYS A 290 -116.74 53.29 REMARK 500 LYS A 290 -114.30 49.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 2 THR A 3 144.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2100 DISTANCE = 6.81 ANGSTROMS REMARK 525 HOH A2136 DISTANCE = 6.45 ANGSTROMS REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PXG A 1323 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS A 1324 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1325 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4CMD RELATED DB: PDB REMARK 900 THE (R)-SELECTIVE TRANSAMINASE FROM NECTRIA HAEMATOCOCCA DBREF 4CMF A 1 320 UNP C7YVL8 C7YVL8_NECH7 1 320 SEQADV 4CMF LEU A 321 UNP C7YVL8 EXPRESSION TAG SEQADV 4CMF GLU A 322 UNP C7YVL8 EXPRESSION TAG SEQRES 1 A 322 MET ALA THR MET ASP LYS VAL PHE ALA GLY TYR ALA GLU SEQRES 2 A 322 ARG GLN ALA VAL LEU GLU ALA SER LYS ASN PRO LEU ALA SEQRES 3 A 322 LYS GLY VAL ALA TRP ILE GLN GLY GLU LEU VAL PRO LEU SEQRES 4 A 322 HIS GLU ALA ARG ILE PRO LEU LEU ASP GLN GLY PHE MET SEQRES 5 A 322 HIS SER ASP LEU THR TYR ASP VAL PRO SER VAL TRP ASP SEQRES 6 A 322 GLY ARG PHE PHE ARG LEU GLU ASP HIS LEU ASN ARG LEU SEQRES 7 A 322 GLU ALA SER CYS LYS LYS MET ARG LEU ARG MET PRO LEU SEQRES 8 A 322 PRO ARG GLU GLU VAL ILE LYS THR LEU VAL ASP MET VAL SEQRES 9 A 322 ALA LYS SER GLY ILE ARG ASP ALA PHE VAL GLU LEU ILE SEQRES 10 A 322 VAL THR ARG GLY LEU THR GLY VAL ARG GLY ALA LYS PRO SEQRES 11 A 322 GLU GLU LEU LEU ASN ASN ASN LEU TYR MET PHE ILE GLN SEQRES 12 A 322 PRO TYR VAL TRP VAL MET ASP PRO ASP VAL GLN TYR THR SEQRES 13 A 322 GLY GLY ARG ALA ILE VAL ALA ARG THR VAL ARG ARG VAL SEQRES 14 A 322 PRO PRO GLY SER ILE ASP PRO THR ILE LYS ASN LEU GLN SEQRES 15 A 322 TRP GLY ASP LEU VAL ARG GLY LEU PHE GLU ALA ASN ASP SEQRES 16 A 322 ARG GLY ALA THR TYR PRO PHE LEU THR ASP GLY ASP ALA SEQRES 17 A 322 ASN LEU THR GLU GLY SER GLY PHE ASN VAL VAL LEU ILE SEQRES 18 A 322 LYS ASP GLY VAL LEU TYR THR PRO ASP ARG GLY VAL LEU SEQRES 19 A 322 GLN GLY ILE THR ARG LYS SER VAL ILE ASP ALA ALA ARG SEQRES 20 A 322 SER CYS GLY TYR GLU ILE ARG VAL GLU HIS VAL PRO ILE SEQRES 21 A 322 GLU ALA THR TYR GLN ALA ASP GLU ILE LEU MET CYS THR SEQRES 22 A 322 THR ALA GLY GLY ILE MET PRO ILE THR THR LEU ASP ASP SEQRES 23 A 322 LYS PRO VAL LYS ASP GLY LYS VAL GLY PRO ILE THR LYS SEQRES 24 A 322 ALA ILE TRP ASP ARG TYR TRP ALA MET HIS TRP GLU ASP SEQRES 25 A 322 GLU PHE SER PHE LYS ILE ASN TYR LEU GLU HET PXG A1323 28 HET TRS A1324 8 HET SO4 A1325 5 HETNAM PXG 3-[O-PHOSPHONOPYRIDOXYL]--AMINO-BENZOIC ACID HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM SO4 SULFATE ION HETSYN TRS TRIS BUFFER FORMUL 2 PXG C15 H17 N2 O7 P FORMUL 3 TRS C4 H12 N O3 1+ FORMUL 4 SO4 O4 S 2- FORMUL 5 HOH *508(H2 O) HELIX 1 1 THR A 3 ALA A 20 1 18 HELIX 2 2 HIS A 40 ALA A 42 5 3 HELIX 3 3 ASP A 48 HIS A 53 1 6 HELIX 4 4 ARG A 70 MET A 85 1 16 HELIX 5 5 PRO A 92 GLY A 108 1 17 HELIX 6 6 LYS A 129 LEU A 133 5 5 HELIX 7 7 ASP A 150 TYR A 155 1 6 HELIX 8 8 TRP A 183 ARG A 196 1 14 HELIX 9 9 GLY A 236 CYS A 249 1 14 HELIX 10 10 ILE A 260 ALA A 266 1 7 HELIX 11 11 GLY A 295 MET A 308 1 14 HELIX 12 12 HIS A 309 GLU A 311 5 3 SHEET 1 AA 5 GLU A 35 PRO A 38 0 SHEET 2 AA 5 VAL A 29 ILE A 32 -1 O ALA A 30 N VAL A 37 SHEET 3 AA 5 ASN A 137 PRO A 144 -1 O MET A 140 N TRP A 31 SHEET 4 AA 5 ALA A 112 THR A 119 -1 O PHE A 113 N GLN A 143 SHEET 5 AA 5 LEU A 56 ASP A 59 -1 O THR A 57 N VAL A 118 SHEET 1 AB 2 GLU A 35 PRO A 38 0 SHEET 2 AB 2 SER A 315 LYS A 317 -1 O PHE A 316 N PHE A 68 SHEET 1 AC 7 ILE A 253 VAL A 255 0 SHEET 2 AC 7 VAL A 225 THR A 228 1 O LEU A 226 N ARG A 254 SHEET 3 AC 7 PHE A 216 LYS A 222 -1 O LEU A 220 N TYR A 227 SHEET 4 AC 7 LEU A 210 GLY A 213 -1 O THR A 211 N VAL A 218 SHEET 5 AC 7 TYR A 200 THR A 204 -1 O LEU A 203 N THR A 211 SHEET 6 AC 7 GLY A 158 VAL A 162 1 O ILE A 161 N PHE A 202 SHEET 7 AC 7 GLY A 277 LEU A 284 1 O PRO A 280 N GLY A 158 SHEET 1 AD 2 ILE A 253 VAL A 255 0 SHEET 2 AD 2 GLY A 277 LEU A 284 -1 O GLY A 277 N THR A 273 SITE 1 AC1 23 VAL A 60 ARG A 77 PHE A 113 GLU A 115 SITE 2 AC1 23 LYS A 179 TRP A 183 GLU A 212 GLY A 215 SITE 3 AC1 23 PHE A 216 ASN A 217 LEU A 234 GLY A 236 SITE 4 AC1 23 ILE A 237 THR A 238 THR A 273 THR A 274 SITE 5 AC1 23 ALA A 275 HOH A2164 HOH A2165 HOH A2166 SITE 6 AC1 23 HOH A2271 HOH A2388 HOH A2505 SITE 1 AC2 7 ARG A 110 LYS A 317 HOH A2062 HOH A2170 SITE 2 AC2 7 HOH A2178 HOH A2287 HOH A2497 SITE 1 AC3 6 ARG A 231 HIS A 257 HOH A2378 HOH A2379 SITE 2 AC3 6 HOH A2407 HOH A2508 CRYST1 61.730 100.340 130.250 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016200 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009966 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007678 0.00000