HEADER NUCLEAR PROTEIN 18-JAN-14 4CMX TITLE CRYSTAL STRUCTURE OF RV3378C COMPND MOL_ID: 1; COMPND 2 MOLECULE: RV3378C; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS NUCLEAR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.LAYRE,H.J.LEE,D.C.YOUNG,A.J.MARTINOT,J.BUTER,A.J.MINNAARD, AUTHOR 2 J.W.ANNAND,S.M.FORTUNE,B.B.SNIDER,I.MATSUNAGA,E.J.RUBIN,T.ALBER, AUTHOR 3 D.B.MOODY REVDAT 3 20-DEC-23 4CMX 1 REMARK REVDAT 2 12-MAR-14 4CMX 1 JRNL REVDAT 1 19-FEB-14 4CMX 0 JRNL AUTH E.LAYRE,H.J.LEE,D.C.YOUNG,A.JEZEK MARTINOT,J.BUTER, JRNL AUTH 2 A.J.MINNAARD,J.W.ANNAND,S.M.FORTUNE,B.B.SNIDER,I.MATSUNAGA, JRNL AUTH 3 E.J.RUBIN,T.ALBER,D.B.MOODY JRNL TITL MOLECULAR PROFILING OF MYCOBACTERIUM TUBERCULOSIS IDENTIFIES JRNL TITL 2 TUBERCULOSINYL NUCLEOSIDE PRODUCTS OF THE JRNL TITL 3 VIRULENCE-ASSOCIATED ENZYME RV3378C. JRNL REF PROC.NATL.ACAD.SCI.USA V. 111 2978 2014 JRNL REFN ISSN 0027-8424 JRNL PMID 24516143 JRNL DOI 10.1073/PNAS.1315883111 REMARK 2 REMARK 2 RESOLUTION. 2.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 26204 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.600 REMARK 3 FREE R VALUE TEST SET COUNT : 1984 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.1639 - 5.6851 0.99 1866 152 0.1920 0.2425 REMARK 3 2 5.6851 - 4.5135 1.00 1760 148 0.1477 0.2161 REMARK 3 3 4.5135 - 3.9432 1.00 1749 143 0.1327 0.1822 REMARK 3 4 3.9432 - 3.5828 1.00 1736 143 0.1349 0.1990 REMARK 3 5 3.5828 - 3.3261 1.00 1732 141 0.1499 0.2069 REMARK 3 6 3.3261 - 3.1300 1.00 1723 142 0.1634 0.2557 REMARK 3 7 3.1300 - 2.9733 1.00 1716 139 0.1821 0.2822 REMARK 3 8 2.9733 - 2.8439 1.00 1707 140 0.1757 0.3023 REMARK 3 9 2.8439 - 2.7344 1.00 1717 142 0.1712 0.2750 REMARK 3 10 2.7344 - 2.6401 1.00 1705 144 0.1862 0.2636 REMARK 3 11 2.6401 - 2.5575 1.00 1693 134 0.1865 0.2600 REMARK 3 12 2.5575 - 2.4844 1.00 1709 141 0.1898 0.2840 REMARK 3 13 2.4844 - 2.4190 1.00 1721 136 0.1930 0.3301 REMARK 3 14 2.4190 - 2.3600 1.00 1686 139 0.1958 0.2760 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4970 REMARK 3 ANGLE : 1.116 6733 REMARK 3 CHIRALITY : 0.078 698 REMARK 3 PLANARITY : 0.006 881 REMARK 3 DIHEDRAL : 15.113 1859 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 4 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.5515 2.1655 -20.8617 REMARK 3 T TENSOR REMARK 3 T11: 0.1473 T22: 0.2032 REMARK 3 T33: 0.1673 T12: 0.0215 REMARK 3 T13: -0.0190 T23: 0.0204 REMARK 3 L TENSOR REMARK 3 L11: 2.1042 L22: 2.0447 REMARK 3 L33: 1.3173 L12: 0.2472 REMARK 3 L13: 0.1245 L23: 0.2292 REMARK 3 S TENSOR REMARK 3 S11: -0.0112 S12: -0.1557 S13: -0.0401 REMARK 3 S21: 0.1371 S22: 0.0145 S23: -0.1650 REMARK 3 S31: -0.0405 S32: 0.1025 S33: -0.0109 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 115 THROUGH 236 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.0758 0.8390 -35.2145 REMARK 3 T TENSOR REMARK 3 T11: 0.1903 T22: 0.1782 REMARK 3 T33: 0.2152 T12: 0.0334 REMARK 3 T13: 0.0228 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 0.6385 L22: 0.6450 REMARK 3 L33: 2.1405 L12: 0.3732 REMARK 3 L13: 0.3056 L23: 0.4724 REMARK 3 S TENSOR REMARK 3 S11: 0.0075 S12: 0.1302 S13: 0.0171 REMARK 3 S21: -0.1231 S22: -0.0068 S23: -0.0709 REMARK 3 S31: -0.0209 S32: 0.0546 S33: -0.0140 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 237 THROUGH 296 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.0882 -7.0643 -11.0305 REMARK 3 T TENSOR REMARK 3 T11: 0.2773 T22: 0.3015 REMARK 3 T33: 0.1474 T12: -0.0414 REMARK 3 T13: 0.0060 T23: -0.0307 REMARK 3 L TENSOR REMARK 3 L11: 0.9080 L22: 1.7783 REMARK 3 L33: 1.1060 L12: 0.5622 REMARK 3 L13: 0.0063 L23: -0.7614 REMARK 3 S TENSOR REMARK 3 S11: 0.1343 S12: -0.0985 S13: 0.0391 REMARK 3 S21: 0.3694 S22: -0.1262 S23: 0.0904 REMARK 3 S31: 0.1070 S32: -0.2406 S33: 0.0134 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND (RESID 4 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.7051 -0.6130 -24.3641 REMARK 3 T TENSOR REMARK 3 T11: 0.1366 T22: 0.2612 REMARK 3 T33: 0.3205 T12: 0.0222 REMARK 3 T13: 0.0094 T23: -0.0789 REMARK 3 L TENSOR REMARK 3 L11: 1.5838 L22: 1.5613 REMARK 3 L33: 1.3409 L12: -0.2022 REMARK 3 L13: -0.2200 L23: 0.0486 REMARK 3 S TENSOR REMARK 3 S11: -0.0185 S12: -0.1080 S13: 0.2041 REMARK 3 S21: -0.0499 S22: -0.0575 S23: 0.2521 REMARK 3 S31: 0.0140 S32: -0.2168 S33: 0.0590 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND (RESID 114 THROUGH 236 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.9794 1.1220 -37.3668 REMARK 3 T TENSOR REMARK 3 T11: 0.1998 T22: 0.2035 REMARK 3 T33: 0.2263 T12: 0.0771 REMARK 3 T13: -0.0365 T23: -0.0221 REMARK 3 L TENSOR REMARK 3 L11: 1.5270 L22: 0.7998 REMARK 3 L33: 1.6947 L12: 0.1396 REMARK 3 L13: -0.3798 L23: 0.0734 REMARK 3 S TENSOR REMARK 3 S11: 0.1090 S12: 0.3040 S13: 0.0426 REMARK 3 S21: -0.2196 S22: -0.0953 S23: 0.1971 REMARK 3 S31: -0.0660 S32: -0.1343 S33: -0.0117 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND (RESID 237 THROUGH 296 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.4368 9.1504 -10.8389 REMARK 3 T TENSOR REMARK 3 T11: 0.2542 T22: 0.3066 REMARK 3 T33: 0.1934 T12: 0.0021 REMARK 3 T13: 0.0384 T23: -0.0305 REMARK 3 L TENSOR REMARK 3 L11: 0.7006 L22: 1.4803 REMARK 3 L33: 0.5623 L12: 0.3622 REMARK 3 L13: 0.1083 L23: 0.3735 REMARK 3 S TENSOR REMARK 3 S11: 0.1193 S12: -0.2149 S13: 0.1720 REMARK 3 S21: 0.3124 S22: -0.2496 S23: 0.2546 REMARK 3 S31: -0.0716 S32: -0.0908 S33: 0.0771 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4CMX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1290059507. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1111 REMARK 200 MONOCHROMATOR : DOUBLE FLAT CRYSTAL, SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26204 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.360 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.36 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.57000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY CODE 4CMV REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.73000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.37850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.11550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.37850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.73000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.11550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 LEU A 3 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 LEU B 3 REMARK 465 GLN B 277 REMARK 465 PRO B 278 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 259 O61 BHC B 1297 1.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 31 89.58 -152.61 REMARK 500 SER A 80 -177.94 -170.31 REMARK 500 SER A 211 143.75 -170.16 REMARK 500 LEU A 217 -10.79 74.12 REMARK 500 HIS A 252 39.79 -143.65 REMARK 500 ARG A 275 -178.29 -60.77 REMARK 500 ALA A 276 127.26 -39.07 REMARK 500 PRO A 278 -83.46 -129.38 REMARK 500 SER B 80 -174.28 -170.82 REMARK 500 ASP B 123 33.47 -94.44 REMARK 500 PRO B 129 43.23 -77.17 REMARK 500 LEU B 217 -8.70 76.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B2020 DISTANCE = 5.92 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BHC A 1297 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BHC B 1297 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BHC A 1298 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1298 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1299 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1299 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4CMV RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RV3378C REMARK 900 RELATED ID: 4CMW RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RV3378C REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUES 1-3 ARE DISORDERED REMARK 999 RESIDUES 1-3 AND 277-278 ARE DISORDERED DBREF 4CMX A 1 296 UNP O50407 TUBOL_MYCTU 1 296 DBREF 4CMX B 1 296 UNP O50407 TUBOL_MYCTU 1 296 SEQRES 1 A 296 MET ASN LEU VAL SER GLU LYS GLU PHE LEU ASP LEU PRO SEQRES 2 A 296 LEU VAL SER VAL ALA GLU ILE VAL ARG CYS ARG GLY PRO SEQRES 3 A 296 LYS VAL SER VAL PHE PRO PHE ASP GLY THR ARG ARG TRP SEQRES 4 A 296 PHE HIS LEU GLU CYS ASN PRO GLN TYR ASP ASP TYR GLN SEQRES 5 A 296 GLN ALA ALA LEU ARG GLN SER ILE ARG ILE LEU LYS MET SEQRES 6 A 296 LEU PHE GLU HIS GLY ILE GLU THR VAL ILE SER PRO ILE SEQRES 7 A 296 PHE SER ASP ASP LEU LEU ASP ARG GLY ASP ARG TYR ILE SEQRES 8 A 296 VAL GLN ALA LEU GLU GLY MET ALA LEU LEU ALA ASN ASP SEQRES 9 A 296 GLU GLU ILE LEU SER PHE TYR LYS GLU HIS GLU VAL HIS SEQRES 10 A 296 VAL LEU PHE TYR GLY ASP TYR LYS LYS ARG LEU PRO SER SEQRES 11 A 296 THR ALA GLN GLY ALA ALA VAL VAL LYS SER PHE ASP ASP SEQRES 12 A 296 LEU THR ILE SER THR SER SER ASN THR GLU HIS ARG LEU SEQRES 13 A 296 CYS PHE GLY VAL PHE GLY ASN ASP ALA ALA GLU SER VAL SEQRES 14 A 296 ALA GLN PHE SER ILE SER TRP ASN GLU THR HIS GLY LYS SEQRES 15 A 296 PRO PRO THR ARG ARG GLU ILE ILE GLU GLY TYR TYR GLY SEQRES 16 A 296 GLU TYR VAL ASP LYS ALA ASP MET PHE ILE GLY PHE GLY SEQRES 17 A 296 ARG PHE SER THR PHE ASP PHE PRO LEU LEU SER SER GLY SEQRES 18 A 296 LYS THR SER LEU TYR PHE THR VAL ALA PRO SER TYR TYR SEQRES 19 A 296 MET THR GLU THR THR LEU ARG ARG ILE LEU TYR ASP HIS SEQRES 20 A 296 ILE TYR LEU ARG HIS PHE ARG PRO LYS PRO ASP TYR SER SEQRES 21 A 296 ALA MET SER ALA ASP GLN LEU ASN VAL LEU ARG ASN ARG SEQRES 22 A 296 TYR ARG ALA GLN PRO ASP ARG VAL PHE GLY VAL GLY CYS SEQRES 23 A 296 VAL HIS ASP GLY ILE TRP PHE ALA GLU GLY SEQRES 1 B 296 MET ASN LEU VAL SER GLU LYS GLU PHE LEU ASP LEU PRO SEQRES 2 B 296 LEU VAL SER VAL ALA GLU ILE VAL ARG CYS ARG GLY PRO SEQRES 3 B 296 LYS VAL SER VAL PHE PRO PHE ASP GLY THR ARG ARG TRP SEQRES 4 B 296 PHE HIS LEU GLU CYS ASN PRO GLN TYR ASP ASP TYR GLN SEQRES 5 B 296 GLN ALA ALA LEU ARG GLN SER ILE ARG ILE LEU LYS MET SEQRES 6 B 296 LEU PHE GLU HIS GLY ILE GLU THR VAL ILE SER PRO ILE SEQRES 7 B 296 PHE SER ASP ASP LEU LEU ASP ARG GLY ASP ARG TYR ILE SEQRES 8 B 296 VAL GLN ALA LEU GLU GLY MET ALA LEU LEU ALA ASN ASP SEQRES 9 B 296 GLU GLU ILE LEU SER PHE TYR LYS GLU HIS GLU VAL HIS SEQRES 10 B 296 VAL LEU PHE TYR GLY ASP TYR LYS LYS ARG LEU PRO SER SEQRES 11 B 296 THR ALA GLN GLY ALA ALA VAL VAL LYS SER PHE ASP ASP SEQRES 12 B 296 LEU THR ILE SER THR SER SER ASN THR GLU HIS ARG LEU SEQRES 13 B 296 CYS PHE GLY VAL PHE GLY ASN ASP ALA ALA GLU SER VAL SEQRES 14 B 296 ALA GLN PHE SER ILE SER TRP ASN GLU THR HIS GLY LYS SEQRES 15 B 296 PRO PRO THR ARG ARG GLU ILE ILE GLU GLY TYR TYR GLY SEQRES 16 B 296 GLU TYR VAL ASP LYS ALA ASP MET PHE ILE GLY PHE GLY SEQRES 17 B 296 ARG PHE SER THR PHE ASP PHE PRO LEU LEU SER SER GLY SEQRES 18 B 296 LYS THR SER LEU TYR PHE THR VAL ALA PRO SER TYR TYR SEQRES 19 B 296 MET THR GLU THR THR LEU ARG ARG ILE LEU TYR ASP HIS SEQRES 20 B 296 ILE TYR LEU ARG HIS PHE ARG PRO LYS PRO ASP TYR SER SEQRES 21 B 296 ALA MET SER ALA ASP GLN LEU ASN VAL LEU ARG ASN ARG SEQRES 22 B 296 TYR ARG ALA GLN PRO ASP ARG VAL PHE GLY VAL GLY CYS SEQRES 23 B 296 VAL HIS ASP GLY ILE TRP PHE ALA GLU GLY HET BHC A1297 24 HET BHC A1298 24 HET EDO A1299 4 HET PEG A1300 7 HET BHC B1297 24 HET EDO B1298 4 HET EDO B1299 4 HETNAM BHC BENZENE HEXACARBOXYLIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL FORMUL 3 BHC 3(C12 H6 O12) FORMUL 5 EDO 3(C2 H6 O2) FORMUL 6 PEG C4 H10 O3 FORMUL 10 HOH *256(H2 O) HELIX 1 1 SER A 5 LEU A 12 1 8 HELIX 2 2 PRO A 13 GLY A 25 1 13 HELIX 3 3 GLY A 35 CYS A 44 1 10 HELIX 4 4 ASP A 50 HIS A 69 1 20 HELIX 5 5 TYR A 90 ASP A 104 1 15 HELIX 6 6 ASP A 104 HIS A 114 1 11 HELIX 7 7 ASP A 123 LEU A 128 1 6 HELIX 8 8 THR A 131 THR A 148 1 18 HELIX 9 9 ALA A 165 GLY A 181 1 17 HELIX 10 10 THR A 185 GLY A 195 1 11 HELIX 11 11 PRO A 231 MET A 235 5 5 HELIX 12 12 THR A 236 LEU A 250 1 15 HELIX 13 13 ASP A 258 MET A 262 5 5 HELIX 14 14 SER A 263 ARG A 275 1 13 HELIX 15 15 SER B 5 LEU B 12 1 8 HELIX 16 16 PRO B 13 GLY B 25 1 13 HELIX 17 17 GLY B 35 CYS B 44 1 10 HELIX 18 18 ASP B 50 HIS B 69 1 20 HELIX 19 19 TYR B 90 ASP B 104 1 15 HELIX 20 20 ASP B 104 HIS B 114 1 11 HELIX 21 21 ASP B 123 LEU B 128 1 6 HELIX 22 22 THR B 131 THR B 148 1 18 HELIX 23 23 ALA B 165 GLY B 181 1 17 HELIX 24 24 THR B 185 GLY B 195 1 11 HELIX 25 25 PRO B 231 MET B 235 5 5 HELIX 26 26 THR B 236 LEU B 250 1 15 HELIX 27 27 ASP B 258 MET B 262 5 5 HELIX 28 28 SER B 263 ALA B 276 1 14 SHEET 1 AA 7 VAL A 116 TYR A 121 0 SHEET 2 AA 7 HIS A 154 VAL A 160 1 O HIS A 154 N HIS A 117 SHEET 3 AA 7 THR A 73 PHE A 79 1 O VAL A 74 N CYS A 157 SHEET 4 AA 7 VAL A 28 VAL A 30 1 O SER A 29 N ILE A 75 SHEET 5 AA 7 MET A 203 PHE A 207 1 O MET A 203 N VAL A 30 SHEET 6 AA 7 SER A 224 THR A 228 1 O SER A 224 N PHE A 204 SHEET 7 AA 7 VAL B 281 PHE B 282 -1 O PHE B 282 N PHE A 227 SHEET 1 AB 7 VAL A 281 PHE A 282 0 SHEET 2 AB 7 SER B 224 THR B 228 -1 O PHE B 227 N PHE A 282 SHEET 3 AB 7 MET B 203 PHE B 207 1 O PHE B 204 N TYR B 226 SHEET 4 AB 7 VAL B 28 VAL B 30 1 O VAL B 30 N ILE B 205 SHEET 5 AB 7 THR B 73 PHE B 79 1 O THR B 73 N SER B 29 SHEET 6 AB 7 HIS B 154 VAL B 160 1 O ARG B 155 N VAL B 74 SHEET 7 AB 7 VAL B 116 TYR B 121 1 O HIS B 117 N LEU B 156 SHEET 1 AC 2 GLY A 285 HIS A 288 0 SHEET 2 AC 2 ILE A 291 ALA A 294 -1 O ILE A 291 N HIS A 288 SHEET 1 BA 2 GLY B 285 HIS B 288 0 SHEET 2 BA 2 ILE B 291 ALA B 294 -1 O ILE B 291 N HIS B 288 CISPEP 1 GLY A 25 PRO A 26 0 4.38 CISPEP 2 ARG A 254 PRO A 255 0 3.13 CISPEP 3 ALA A 276 GLN A 277 0 22.93 CISPEP 4 GLN A 277 PRO A 278 0 -17.26 CISPEP 5 GLY B 25 PRO B 26 0 -3.10 CISPEP 6 ARG B 254 PRO B 255 0 3.19 SITE 1 AC1 14 ARG A 37 ARG A 38 ASP A 85 ARG A 86 SITE 2 AC1 14 ARG A 89 ARG A 209 PEG A1300 HOH A2016 SITE 3 AC1 14 HOH A2132 ARG B 89 TYR B 90 LYS B 256 SITE 4 AC1 14 PRO B 257 TYR B 259 SITE 1 AC2 16 ARG A 89 TYR A 90 LYS A 256 PRO A 257 SITE 2 AC2 16 TYR A 259 HOH A2114 HOH A2115 HOH A2118 SITE 3 AC2 16 ARG B 37 ARG B 38 ASP B 85 ARG B 86 SITE 4 AC2 16 ARG B 89 ARG B 209 HOH B2015 HOH B2047 SITE 1 AC3 9 ARG A 89 HIS A 252 ARG A 254 LYS A 256 SITE 2 AC3 9 HOH A2133 HOH A2134 ARG B 89 ARG B 254 SITE 3 AC3 9 LYS B 256 SITE 1 AC4 3 ARG B 89 LYS B 256 HOH B2105 SITE 1 AC5 3 LYS A 222 SER A 224 ARG A 251 SITE 1 AC6 8 ARG A 37 HIS A 41 BHC A1297 HOH A2016 SITE 2 AC6 8 TYR B 90 PRO B 257 ASP B 258 TYR B 259 SITE 1 AC7 5 TYR A 90 ARG B 37 ARG B 89 GLN B 93 SITE 2 AC7 5 HOH B2015 CRYST1 69.460 94.231 94.757 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014397 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010612 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010553 0.00000