HEADER CELL CYCLE 20-JAN-14 4CN0 TITLE AN INTERTWINED HOMODIMER OF THE PDZ HOMOLOGY DOMAIN OF AHNAK2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN AHNAK2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: PDZ DOMAIN, RESIDUES 108-203; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETM11 KEYWDS CELL CYCLE, DOMAIN SWAPPING, INTERTWINING, PDZ DOMAIN EXPDTA X-RAY DIFFRACTION AUTHOR H.HAN,P.KURSULA REVDAT 7 20-DEC-23 4CN0 1 REMARK REVDAT 6 07-MAR-18 4CN0 1 SOURCE REMARK REVDAT 5 17-DEC-14 4CN0 1 REMARK REVDAT 4 27-AUG-14 4CN0 1 JRNL REVDAT 3 23-APR-14 4CN0 1 ATOM REVDAT 2 09-APR-14 4CN0 1 JRNL REVDAT 1 02-APR-14 4CN0 0 JRNL AUTH H.HAN,P.KURSULA JRNL TITL PERIAXIN AND AHNAK NUCLEOPROTEIN 2 FORM INTERTWINED JRNL TITL 2 HOMODIMERS THROUGH DOMAIN SWAPPING JRNL REF J.BIOL.CHEM. V. 289 14121 2014 JRNL REFN ISSN 0021-9258 JRNL PMID 24675079 JRNL DOI 10.1074/JBC.M114.554816 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 25739 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1288 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.0167 - 3.6396 1.00 2847 150 0.1688 0.1830 REMARK 3 2 3.6396 - 2.8890 1.00 2754 145 0.1814 0.2034 REMARK 3 3 2.8890 - 2.5238 1.00 2729 143 0.1862 0.2368 REMARK 3 4 2.5238 - 2.2931 1.00 2710 143 0.1837 0.2015 REMARK 3 5 2.2931 - 2.1287 1.00 2708 142 0.1808 0.2383 REMARK 3 6 2.1287 - 2.0032 1.00 2676 142 0.1852 0.2247 REMARK 3 7 2.0032 - 1.9029 1.00 2671 140 0.2112 0.2627 REMARK 3 8 1.9029 - 1.8200 1.00 2696 143 0.2338 0.2541 REMARK 3 9 1.8200 - 1.7500 1.00 2660 140 0.2601 0.2820 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1505 REMARK 3 ANGLE : 1.105 2020 REMARK 3 CHIRALITY : 0.037 223 REMARK 3 PLANARITY : 0.009 258 REMARK 3 DIHEDRAL : 16.718 584 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 109 THROUGH 123 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.0501 8.1187 -6.7701 REMARK 3 T TENSOR REMARK 3 T11: 0.6301 T22: 0.3388 REMARK 3 T33: 0.4093 T12: -0.0008 REMARK 3 T13: -0.0429 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 0.5954 L22: 0.4809 REMARK 3 L33: 0.6205 L12: -0.3206 REMARK 3 L13: -0.5063 L23: 0.1423 REMARK 3 S TENSOR REMARK 3 S11: -0.1735 S12: 0.1610 S13: -0.0800 REMARK 3 S21: -0.1798 S22: 0.2142 S23: 0.2188 REMARK 3 S31: 0.6138 S32: 0.1496 S33: 0.0003 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 124 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.2863 17.9932 -13.5364 REMARK 3 T TENSOR REMARK 3 T11: 0.3851 T22: 0.4125 REMARK 3 T33: 0.3886 T12: -0.0829 REMARK 3 T13: -0.0417 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.3621 L22: 0.7005 REMARK 3 L33: 0.9523 L12: -0.4533 REMARK 3 L13: -0.3907 L23: 0.0527 REMARK 3 S TENSOR REMARK 3 S11: 0.5045 S12: 0.2746 S13: 0.0233 REMARK 3 S21: 0.1757 S22: -0.2588 S23: 0.1643 REMARK 3 S31: 0.7119 S32: -0.4493 S33: 0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 139 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.5513 18.7305 -10.9270 REMARK 3 T TENSOR REMARK 3 T11: 0.3470 T22: 0.3850 REMARK 3 T33: 0.4462 T12: 0.0046 REMARK 3 T13: 0.0053 T23: 0.0338 REMARK 3 L TENSOR REMARK 3 L11: 0.4381 L22: 1.0616 REMARK 3 L33: 0.6328 L12: -0.3981 REMARK 3 L13: -0.3938 L23: 0.4251 REMARK 3 S TENSOR REMARK 3 S11: -0.2988 S12: 0.2486 S13: -0.0533 REMARK 3 S21: -0.0065 S22: 0.0795 S23: -0.4693 REMARK 3 S31: 0.1296 S32: 0.4942 S33: -0.0003 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 155 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.4729 17.0997 -0.8168 REMARK 3 T TENSOR REMARK 3 T11: 0.3753 T22: 0.3637 REMARK 3 T33: 0.3923 T12: -0.0232 REMARK 3 T13: -0.0039 T23: 0.0237 REMARK 3 L TENSOR REMARK 3 L11: 1.2183 L22: 1.1266 REMARK 3 L33: 0.2046 L12: -0.4102 REMARK 3 L13: 0.0643 L23: -0.0271 REMARK 3 S TENSOR REMARK 3 S11: -0.1427 S12: -0.1764 S13: 0.0882 REMARK 3 S21: -0.1856 S22: 0.1864 S23: 0.0247 REMARK 3 S31: 0.1192 S32: -0.0895 S33: -0.0002 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESID 171 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.0827 18.4737 7.4579 REMARK 3 T TENSOR REMARK 3 T11: 0.3749 T22: 0.5689 REMARK 3 T33: 0.4217 T12: 0.0441 REMARK 3 T13: -0.0057 T23: 0.0869 REMARK 3 L TENSOR REMARK 3 L11: 1.8641 L22: 0.6216 REMARK 3 L33: 2.2559 L12: 0.2652 REMARK 3 L13: -2.0483 L23: -0.2301 REMARK 3 S TENSOR REMARK 3 S11: -0.1860 S12: -0.0285 S13: 0.0883 REMARK 3 S21: 0.3007 S22: 0.3069 S23: 0.0138 REMARK 3 S31: 0.1734 S32: -0.5086 S33: -0.0009 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND (RESID 111 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.4975 7.8766 12.7336 REMARK 3 T TENSOR REMARK 3 T11: 0.6316 T22: 0.6381 REMARK 3 T33: 0.5731 T12: 0.0290 REMARK 3 T13: -0.0287 T23: 0.1112 REMARK 3 L TENSOR REMARK 3 L11: 0.2967 L22: 0.4632 REMARK 3 L33: 0.3420 L12: -0.3254 REMARK 3 L13: -0.2370 L23: 0.0167 REMARK 3 S TENSOR REMARK 3 S11: -0.2747 S12: -0.8844 S13: -0.5170 REMARK 3 S21: 0.2857 S22: 0.4013 S23: -0.2319 REMARK 3 S31: 0.8306 S32: -0.6797 S33: 0.0001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN B AND (RESID 121 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.6417 20.7168 9.6185 REMARK 3 T TENSOR REMARK 3 T11: 0.2754 T22: 0.8373 REMARK 3 T33: 0.4533 T12: 0.0960 REMARK 3 T13: 0.0134 T23: 0.1855 REMARK 3 L TENSOR REMARK 3 L11: 0.1598 L22: 3.0488 REMARK 3 L33: 1.0801 L12: 0.3293 REMARK 3 L13: 0.2538 L23: -0.8946 REMARK 3 S TENSOR REMARK 3 S11: 0.2474 S12: 0.4247 S13: 0.1013 REMARK 3 S21: 0.9055 S22: 0.7086 S23: 0.5616 REMARK 3 S31: 0.0408 S32: -0.5519 S33: 0.1984 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN B AND (RESID 131 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.7676 21.4987 15.2799 REMARK 3 T TENSOR REMARK 3 T11: 0.5038 T22: 0.6317 REMARK 3 T33: 0.3687 T12: 0.1546 REMARK 3 T13: 0.0260 T23: 0.1346 REMARK 3 L TENSOR REMARK 3 L11: 2.8937 L22: 2.3227 REMARK 3 L33: 1.7103 L12: 0.1102 REMARK 3 L13: 0.1377 L23: 0.9361 REMARK 3 S TENSOR REMARK 3 S11: -0.7485 S12: 0.3291 S13: -0.4806 REMARK 3 S21: 0.1829 S22: 0.8866 S23: -0.0321 REMARK 3 S31: -0.6859 S32: -0.0943 S33: 0.0078 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN B AND (RESID 146 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.6882 11.6976 11.6815 REMARK 3 T TENSOR REMARK 3 T11: 0.5239 T22: 0.9516 REMARK 3 T33: 0.6987 T12: -0.0211 REMARK 3 T13: 0.1024 T23: 0.2520 REMARK 3 L TENSOR REMARK 3 L11: 0.1065 L22: 0.3511 REMARK 3 L33: 0.0377 L12: -0.1462 REMARK 3 L13: -0.0285 L23: 0.1050 REMARK 3 S TENSOR REMARK 3 S11: 0.0847 S12: -1.0067 S13: -1.3146 REMARK 3 S21: -0.1179 S22: 0.6494 S23: 0.1012 REMARK 3 S31: 0.9323 S32: -0.8399 S33: 0.0161 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN B AND (RESID 155 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.4477 19.6379 -0.1858 REMARK 3 T TENSOR REMARK 3 T11: 0.2934 T22: 0.3917 REMARK 3 T33: 0.3760 T12: -0.0228 REMARK 3 T13: -0.0287 T23: 0.0432 REMARK 3 L TENSOR REMARK 3 L11: 1.7916 L22: 2.1713 REMARK 3 L33: 2.3082 L12: -1.0200 REMARK 3 L13: -1.2373 L23: -0.5629 REMARK 3 S TENSOR REMARK 3 S11: -0.1521 S12: -0.0672 S13: 0.0693 REMARK 3 S21: 0.0845 S22: 0.2296 S23: 0.0740 REMARK 3 S31: 0.0007 S32: -0.3628 S33: 0.0001 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN B AND (RESID 186 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.2582 8.5152 -9.5450 REMARK 3 T TENSOR REMARK 3 T11: 0.6073 T22: 0.3475 REMARK 3 T33: 0.4034 T12: 0.0607 REMARK 3 T13: 0.0267 T23: -0.0421 REMARK 3 L TENSOR REMARK 3 L11: 0.9142 L22: 0.2655 REMARK 3 L33: 0.2193 L12: 0.0078 REMARK 3 L13: -0.2817 L23: 0.1544 REMARK 3 S TENSOR REMARK 3 S11: -0.1747 S12: 0.1414 S13: -0.2814 REMARK 3 S21: 0.0771 S22: 0.0261 S23: -0.0681 REMARK 3 S31: 1.3553 S32: 0.2228 S33: -0.0001 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN B AND (RESID 196 THROUGH 203 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.5388 -9.7383 -28.4079 REMARK 3 T TENSOR REMARK 3 T11: 0.7126 T22: 0.5400 REMARK 3 T33: 0.5128 T12: -0.0014 REMARK 3 T13: 0.0620 T23: -0.1483 REMARK 3 L TENSOR REMARK 3 L11: 0.1759 L22: 0.3146 REMARK 3 L33: 0.0682 L12: 0.0707 REMARK 3 L13: -0.0580 L23: 0.0618 REMARK 3 S TENSOR REMARK 3 S11: 0.2758 S12: -0.4857 S13: 0.7644 REMARK 3 S21: 0.0810 S22: -0.7420 S23: 1.3616 REMARK 3 S31: -1.5103 S32: -0.6749 S33: -0.0066 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4CN0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1290059519. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9669 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25792 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 18.70 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 20.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4CMZ REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG8000, 50 MM KH2PO4, PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 21.77000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.54000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 43.54000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 21.77000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2067 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 107 REMARK 465 GLN A 108 REMARK 465 ALA A 196 REMARK 465 PRO A 197 REMARK 465 GLN A 198 REMARK 465 ASP A 199 REMARK 465 GLU A 200 REMARK 465 GLU A 201 REMARK 465 TRP A 202 REMARK 465 ALA A 203 REMARK 465 GLY B 107 REMARK 465 GLN B 108 REMARK 465 GLU B 109 REMARK 465 ALA B 110 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA A 110 O HOH A 2001 2.07 REMARK 500 O HOH A 2045 O HOH A 2051 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA B 196 1.27 -60.01 REMARK 500 ASP B 199 59.17 -108.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA B 196 PRO B 197 -125.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 1196 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 1197 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 1198 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4CMZ RELATED DB: PDB REMARK 900 AN INTERTWINED HOMODIMER OF THE PDZ HOMOLOGY DOMAIN OF PERIAXIN DBREF 4CN0 A 108 203 UNP Q8IVF2 AHNK2_HUMAN 108 203 DBREF 4CN0 B 108 203 UNP Q8IVF2 AHNK2_HUMAN 108 203 SEQADV 4CN0 GLY A 107 UNP Q8IVF2 EXPRESSION TAG SEQADV 4CN0 GLY B 107 UNP Q8IVF2 EXPRESSION TAG SEQRES 1 A 97 GLY GLN GLU ALA THR GLU VAL THR LEU LYS THR GLU VAL SEQRES 2 A 97 GLU ALA GLY ALA SER GLY TYR SER VAL THR GLY GLY GLY SEQRES 3 A 97 ASP GLN GLY ILE PHE VAL LYS GLN VAL LEU LYS ASP SER SEQRES 4 A 97 SER ALA ALA LYS LEU PHE ASN LEU ARG GLU GLY ASP GLN SEQRES 5 A 97 LEU LEU SER THR THR VAL PHE PHE GLU ASN ILE LYS TYR SEQRES 6 A 97 GLU ASP ALA LEU LYS ILE LEU GLN TYR SER GLU PRO TYR SEQRES 7 A 97 LYS VAL GLN PHE LYS ILE ARG ARG GLN LEU PRO ALA PRO SEQRES 8 A 97 GLN ASP GLU GLU TRP ALA SEQRES 1 B 97 GLY GLN GLU ALA THR GLU VAL THR LEU LYS THR GLU VAL SEQRES 2 B 97 GLU ALA GLY ALA SER GLY TYR SER VAL THR GLY GLY GLY SEQRES 3 B 97 ASP GLN GLY ILE PHE VAL LYS GLN VAL LEU LYS ASP SER SEQRES 4 B 97 SER ALA ALA LYS LEU PHE ASN LEU ARG GLU GLY ASP GLN SEQRES 5 B 97 LEU LEU SER THR THR VAL PHE PHE GLU ASN ILE LYS TYR SEQRES 6 B 97 GLU ASP ALA LEU LYS ILE LEU GLN TYR SER GLU PRO TYR SEQRES 7 B 97 LYS VAL GLN PHE LYS ILE ARG ARG GLN LEU PRO ALA PRO SEQRES 8 B 97 GLN ASP GLU GLU TRP ALA HET PG4 A1196 31 HET PG4 A1197 31 HET PG4 A1198 31 HET K B1196 1 HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM K POTASSIUM ION FORMUL 3 PG4 3(C8 H18 O5) FORMUL 6 K K 1+ FORMUL 7 HOH *113(H2 O) HELIX 1 1 SER A 145 LEU A 150 1 6 HELIX 2 2 LYS A 170 GLU A 182 1 13 HELIX 3 3 SER B 145 LEU B 150 1 6 HELIX 4 4 LYS B 170 SER B 181 1 12 SHEET 1 AA 2 GLU A 112 LYS A 116 0 SHEET 2 AA 2 LYS B 185 GLN B 193 -1 O ILE B 190 N LEU A 115 SHEET 1 AB 2 GLU A 120 ALA A 121 0 SHEET 2 AB 2 LYS B 185 GLN B 193 1 O VAL B 186 N GLU A 120 SHEET 1 AC 6 TYR A 126 GLY A 130 0 SHEET 2 AC 6 ILE A 136 VAL A 141 -1 O PHE A 137 N THR A 129 SHEET 3 AC 6 GLN A 158 PHE A 165 -1 O LEU A 159 N ILE A 136 SHEET 4 AC 6 GLN B 158 PHE B 165 -1 O THR B 162 N VAL A 164 SHEET 5 AC 6 ILE B 136 VAL B 141 1 O ILE B 136 N LEU B 159 SHEET 6 AC 6 TYR B 126 GLY B 130 1 O SER B 127 N LYS B 139 SHEET 1 AD 5 TYR A 126 GLY A 130 0 SHEET 2 AD 5 ILE A 136 VAL A 141 -1 O PHE A 137 N THR A 129 SHEET 3 AD 5 GLN A 158 PHE A 165 -1 O LEU A 159 N ILE A 136 SHEET 4 AD 5 LYS B 185 GLN B 193 -1 O LYS B 185 N PHE A 165 SHEET 5 AD 5 GLU A 120 ALA A 121 1 O GLU A 120 N VAL B 186 SHEET 1 BA 2 GLU B 112 LYS B 116 0 SHEET 2 BA 2 LYS A 185 GLN A 193 -1 O ILE A 190 N LEU B 115 SHEET 1 AE 6 TYR A 126 GLY A 130 0 SHEET 2 AE 6 ILE A 136 VAL A 141 -1 O PHE A 137 N THR A 129 SHEET 3 AE 6 GLN A 158 PHE A 165 -1 O LEU A 159 N ILE A 136 SHEET 4 AE 6 GLN B 158 PHE B 165 -1 O THR B 162 N VAL A 164 SHEET 5 AE 6 LYS A 185 GLN A 193 -1 O LYS A 185 N PHE B 165 SHEET 6 AE 6 GLU B 112 LYS B 116 -1 O VAL B 113 N ARG A 192 SHEET 1 BB 2 GLU B 120 ALA B 121 0 SHEET 2 BB 2 LYS A 185 GLN A 193 -1 O VAL A 186 N GLU B 120 SHEET 1 AF 5 TYR A 126 GLY A 130 0 SHEET 2 AF 5 ILE A 136 VAL A 141 -1 O PHE A 137 N THR A 129 SHEET 3 AF 5 GLN A 158 PHE A 165 -1 O LEU A 159 N ILE A 136 SHEET 4 AF 5 LYS B 185 GLN B 193 -1 O LYS B 185 N PHE A 165 SHEET 5 AF 5 GLU A 112 LYS A 116 -1 O VAL A 113 N ARG B 192 CISPEP 1 ALA A 110 THR A 111 0 -8.04 SITE 1 AC1 8 LEU A 175 GLN A 179 HOH A2056 HOH A2061 SITE 2 AC1 8 HOH A2063 HOH A2078 TYR B 126 LYS B 170 SITE 1 AC2 6 THR A 129 GLY A 130 GLN A 134 PG4 A1198 SITE 2 AC2 6 TYR B 171 GLU B 201 SITE 1 AC3 6 PHE A 137 VAL A 138 LYS A 139 GLU A 155 SITE 2 AC3 6 GLY A 156 PG4 A1197 CRYST1 81.730 81.730 65.310 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012235 0.007064 0.000000 0.00000 SCALE2 0.000000 0.014128 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015312 0.00000