HEADER OXIDOREDUCTASE 29-JAN-14 4COL TITLE CRYSTAL STRUCTURE OF THE ANAEROBIC RIBONUCLEOTIDE REDUCTASE FROM TITLE 2 THERMOTOGA MARITIMA WITH DATP BOUND IN THE SPECIFICITY SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANAEROBIC RIBONUCLEOSIDE-TRIPHOSPHATE REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ANAEROBIC RIBONUCLEOTIDE REDUCTASE; COMPND 5 EC: 1.17.4.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 243274; SOURCE 4 STRAIN: MSB8; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: CODONPLUS-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PRSFDUET-1 KEYWDS OXIDOREDUCTASE, RADICAL CHEMISTRY, ALLOSTERIC REGULATION, ANAEROBIC KEYWDS 2 ENZYME EXPDTA X-RAY DIFFRACTION AUTHOR O.AURELIUS,R.JOHANSSON,V.BAGENHOLM,T.BECK,A.BALHUIZEN,D.LUNDIN, AUTHOR 2 B.M.SJOBERG,E.MULLIEZ,D.T.LOGAN REVDAT 4 20-DEC-23 4COL 1 REMARK LINK REVDAT 3 17-JAN-18 4COL 1 REMARK REVDAT 2 15-JUL-15 4COL 1 JRNL REVDAT 1 06-MAY-15 4COL 0 JRNL AUTH O.AURELIUS,R.JOHANSSON,V.BAGENHOLM,T.BECK,A.BALHUIZEN, JRNL AUTH 2 D.LUNDIN,B.M.SJOBERG,E.MULLIEZ,D.T.LOGAN JRNL TITL THE CRYSTAL STRUCTURE OF THERMOTOGA MARITIMA CLASS III JRNL TITL 2 RIBONUCLEOTIDE REDUCTASE LACKS A RADICAL CYSTEINE JRNL TITL 3 PRE-POSITIONED IN THE ACTIVE SITE. JRNL REF PLOS ONE V. 10 01289 2015 JRNL REFN ESSN 1932-6203 JRNL PMID 26147435 JRNL DOI 10.1371/JOURNAL.PONE.0128199 REMARK 2 REMARK 2 RESOLUTION. 1.96 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.96 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 82656 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.500 REMARK 3 FREE R VALUE TEST SET COUNT : 2078 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.1395 - 4.8273 1.00 5522 143 0.1580 0.1760 REMARK 3 2 4.8273 - 3.8344 1.00 5453 151 0.1404 0.1512 REMARK 3 3 3.8344 - 3.3505 1.00 5398 146 0.1711 0.2315 REMARK 3 4 3.3505 - 3.0445 1.00 5431 125 0.1867 0.2280 REMARK 3 5 3.0445 - 2.8265 1.00 5401 154 0.1855 0.2247 REMARK 3 6 2.8265 - 2.6600 1.00 5396 147 0.1784 0.2090 REMARK 3 7 2.6600 - 2.5268 1.00 5360 130 0.1724 0.2020 REMARK 3 8 2.5268 - 2.4169 1.00 5425 142 0.1830 0.2558 REMARK 3 9 2.4169 - 2.3239 1.00 5396 137 0.2029 0.2260 REMARK 3 10 2.3239 - 2.2437 0.96 5164 132 0.3495 0.3979 REMARK 3 11 2.2437 - 2.1736 0.96 5217 131 0.3400 0.4349 REMARK 3 12 2.1736 - 2.1115 1.00 5402 114 0.2240 0.2590 REMARK 3 13 2.1115 - 2.0559 1.00 5347 161 0.2318 0.2873 REMARK 3 14 2.0559 - 2.0058 1.00 5402 111 0.2433 0.2519 REMARK 3 15 2.0058 - 1.9602 0.98 5264 154 0.2817 0.3129 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.090 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.92 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 9953 REMARK 3 ANGLE : 1.027 13448 REMARK 3 CHIRALITY : 0.061 1433 REMARK 3 PLANARITY : 0.005 1694 REMARK 3 DIHEDRAL : 14.796 3674 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 1 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.1687 7.0734 36.2198 REMARK 3 T TENSOR REMARK 3 T11: 0.2073 T22: 0.3068 REMARK 3 T33: 0.2331 T12: -0.0728 REMARK 3 T13: -0.0006 T23: 0.0449 REMARK 3 L TENSOR REMARK 3 L11: 2.6273 L22: 0.5971 REMARK 3 L33: 3.5194 L12: -0.3302 REMARK 3 L13: 1.3317 L23: -0.1613 REMARK 3 S TENSOR REMARK 3 S11: -0.0037 S12: 0.4990 S13: 0.0219 REMARK 3 S21: -0.0517 S22: -0.1011 S23: -0.0853 REMARK 3 S31: -0.2147 S32: 0.5638 S33: 0.0875 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 198 THROUGH 351 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.3487 1.2708 55.2679 REMARK 3 T TENSOR REMARK 3 T11: 0.2093 T22: 0.5213 REMARK 3 T33: 0.2224 T12: -0.0682 REMARK 3 T13: 0.0027 T23: 0.0602 REMARK 3 L TENSOR REMARK 3 L11: 2.9221 L22: 1.8243 REMARK 3 L33: 3.6113 L12: 0.0804 REMARK 3 L13: 0.9051 L23: 0.2399 REMARK 3 S TENSOR REMARK 3 S11: 0.1034 S12: -0.6198 S13: -0.0914 REMARK 3 S21: 0.1944 S22: -0.0271 S23: 0.1195 REMARK 3 S31: 0.0927 S32: -0.8566 S33: -0.0708 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 352 THROUGH 579 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.9676 0.3772 54.8316 REMARK 3 T TENSOR REMARK 3 T11: 0.2236 T22: 0.3162 REMARK 3 T33: 0.2155 T12: -0.0368 REMARK 3 T13: -0.0239 T23: -0.0108 REMARK 3 L TENSOR REMARK 3 L11: 2.9869 L22: 0.6343 REMARK 3 L33: 4.4985 L12: -0.5806 REMARK 3 L13: 1.4176 L23: -0.3941 REMARK 3 S TENSOR REMARK 3 S11: 0.0830 S12: -0.0781 S13: -0.1162 REMARK 3 S21: 0.0882 S22: -0.0496 S23: -0.0937 REMARK 3 S31: 0.2158 S32: 0.5912 S33: -0.0154 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 580 THROUGH 630 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.4393 -15.3593 47.3449 REMARK 3 T TENSOR REMARK 3 T11: 0.5525 T22: 0.3616 REMARK 3 T33: 0.4699 T12: -0.1529 REMARK 3 T13: -0.1422 T23: 0.0661 REMARK 3 L TENSOR REMARK 3 L11: 3.2779 L22: 2.1675 REMARK 3 L33: 2.8252 L12: 1.1150 REMARK 3 L13: 1.4194 L23: 1.3833 REMARK 3 S TENSOR REMARK 3 S11: 0.5208 S12: 0.1522 S13: -0.9421 REMARK 3 S21: 0.1503 S22: 0.1587 S23: -0.3182 REMARK 3 S31: 1.1450 S32: -0.2372 S33: -0.6547 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND (RESID 1 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.0214 4.0472 12.7657 REMARK 3 T TENSOR REMARK 3 T11: 0.3069 T22: 1.1850 REMARK 3 T33: 0.3603 T12: 0.1249 REMARK 3 T13: 0.0286 T23: 0.0217 REMARK 3 L TENSOR REMARK 3 L11: 1.6022 L22: 0.4531 REMARK 3 L33: 2.7849 L12: -0.1867 REMARK 3 L13: 0.0924 L23: 0.0078 REMARK 3 S TENSOR REMARK 3 S11: 0.0420 S12: 0.8774 S13: 0.0482 REMARK 3 S21: -0.1427 S22: -0.1281 S23: -0.3367 REMARK 3 S31: -0.1420 S32: 1.5270 S33: 0.0615 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND (RESID 95 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.2379 -2.7274 21.6894 REMARK 3 T TENSOR REMARK 3 T11: 0.2482 T22: 0.1741 REMARK 3 T33: 0.2139 T12: -0.0256 REMARK 3 T13: -0.0301 T23: -0.0319 REMARK 3 L TENSOR REMARK 3 L11: 2.6780 L22: 0.7710 REMARK 3 L33: 3.9991 L12: -0.1101 REMARK 3 L13: 1.1320 L23: -0.4622 REMARK 3 S TENSOR REMARK 3 S11: 0.0684 S12: -0.2069 S13: -0.2298 REMARK 3 S21: -0.0729 S22: 0.0583 S23: 0.0692 REMARK 3 S31: 0.5345 S32: -0.1455 S33: -0.0806 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN B AND (RESID 198 THROUGH 298 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.1325 5.5753 21.0198 REMARK 3 T TENSOR REMARK 3 T11: 0.1924 T22: 0.4943 REMARK 3 T33: 0.2654 T12: 0.0422 REMARK 3 T13: -0.0324 T23: -0.0112 REMARK 3 L TENSOR REMARK 3 L11: 2.5088 L22: 1.5121 REMARK 3 L33: 4.2900 L12: -0.1500 REMARK 3 L13: 0.9181 L23: -0.4338 REMARK 3 S TENSOR REMARK 3 S11: -0.0224 S12: -0.6938 S13: -0.0590 REMARK 3 S21: -0.0646 S22: 0.0244 S23: 0.1781 REMARK 3 S31: -0.0187 S32: -1.0091 S33: -0.0147 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN B AND (RESID 299 THROUGH 386 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.5197 5.2297 5.2760 REMARK 3 T TENSOR REMARK 3 T11: 0.2776 T22: 0.2073 REMARK 3 T33: 0.1763 T12: -0.0012 REMARK 3 T13: -0.0580 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 3.7543 L22: 0.7801 REMARK 3 L33: 4.3691 L12: -0.4463 REMARK 3 L13: 0.8786 L23: 0.2809 REMARK 3 S TENSOR REMARK 3 S11: -0.0411 S12: 0.2062 S13: -0.0945 REMARK 3 S21: -0.0749 S22: 0.0172 S23: 0.1419 REMARK 3 S31: 0.1915 S32: -0.0844 S33: 0.0337 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN B AND (RESID 387 THROUGH 517 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.3297 3.0588 -2.0819 REMARK 3 T TENSOR REMARK 3 T11: 0.3039 T22: 0.5849 REMARK 3 T33: 0.2182 T12: 0.0234 REMARK 3 T13: 0.0017 T23: -0.0314 REMARK 3 L TENSOR REMARK 3 L11: 2.7568 L22: 1.4293 REMARK 3 L33: 4.2711 L12: 0.2075 REMARK 3 L13: 1.5706 L23: -0.3703 REMARK 3 S TENSOR REMARK 3 S11: -0.0425 S12: 0.9600 S13: 0.0195 REMARK 3 S21: -0.2528 S22: 0.0175 S23: -0.0456 REMARK 3 S31: 0.2503 S32: 1.0286 S33: 0.0311 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN B AND (RESID 518 THROUGH 566 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.0193 16.9237 -2.4328 REMARK 3 T TENSOR REMARK 3 T11: 0.5218 T22: 0.3082 REMARK 3 T33: 0.4088 T12: -0.0605 REMARK 3 T13: -0.1286 T23: 0.1051 REMARK 3 L TENSOR REMARK 3 L11: 5.6737 L22: 0.0628 REMARK 3 L33: 3.5163 L12: 0.0430 REMARK 3 L13: -1.0070 L23: -0.5579 REMARK 3 S TENSOR REMARK 3 S11: -0.1398 S12: 0.4709 S13: 1.1818 REMARK 3 S21: -0.1045 S22: -0.0540 S23: 0.0439 REMARK 3 S31: -1.0308 S32: 0.1839 S33: 0.1487 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN B AND (RESID 567 THROUGH 632 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.7419 21.7086 15.3272 REMARK 3 T TENSOR REMARK 3 T11: 0.4584 T22: 0.3309 REMARK 3 T33: 0.4562 T12: 0.1477 REMARK 3 T13: -0.1483 T23: -0.0952 REMARK 3 L TENSOR REMARK 3 L11: 0.9259 L22: 1.3256 REMARK 3 L33: 3.2437 L12: -0.2171 REMARK 3 L13: 0.0824 L23: 0.6719 REMARK 3 S TENSOR REMARK 3 S11: -0.4290 S12: -0.3491 S13: 0.5273 REMARK 3 S21: -0.1241 S22: 0.1092 S23: -0.0912 REMARK 3 S31: -0.9923 S32: -0.2067 S33: 0.2999 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4COL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1290059606. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I911-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : TOROIDAL MIRROR FOR HORIZONTAL REMARK 200 AND VERTICAL FOCUSING REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 82717 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.960 REMARK 200 RESOLUTION RANGE LOW (A) : 29.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.96 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.63000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: PDB ENTRY 4COI REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: A NATIVE CRYSTAL (20 MG/ML, 12% [W/V] REMARK 280 PEG3000, 100 MM MES PH 5.9, 5 MM DTT) SOAKED WITH 0.5 MM DATP, REMARK 280 10 MM MGCL2 AND 20% (V/V) PEG400 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 47.06000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -64.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 47 REMARK 465 ARG A 48 REMARK 465 GLY A 49 REMARK 465 ILE A 50 REMARK 465 ILE A 51 REMARK 465 GLU A 52 REMARK 465 SER A 53 REMARK 465 THR A 54 REMARK 465 ILE A 55 REMARK 465 ASP A 56 REMARK 465 ALA A 57 REMARK 465 ASN A 58 REMARK 465 ALA A 59 REMARK 465 ASN A 60 REMARK 465 VAL A 61 REMARK 465 ARG A 62 REMARK 465 VAL A 63 REMARK 465 CYS A 329 REMARK 465 CYS A 330 REMARK 465 ARG A 331 REMARK 465 LEU A 332 REMARK 465 THR A 333 REMARK 465 SER A 334 REMARK 465 SER A 335 REMARK 465 THR A 336 REMARK 465 GLN A 337 REMARK 465 THR A 338 REMARK 465 LEU A 339 REMARK 465 LYS A 340 REMARK 465 LYS A 341 REMARK 465 PHE A 342 REMARK 465 SER A 343 REMARK 465 LEU A 344 REMARK 465 SER A 345 REMARK 465 SER A 346 REMARK 465 GLU A 347 REMARK 465 GLU A 348 REMARK 465 GLU A 349 REMARK 465 GLU A 350 REMARK 465 GLY A 561 REMARK 465 GLU A 562 REMARK 465 SER A 563 REMARK 465 PHE A 564 REMARK 465 LYS A 565 REMARK 465 LYS A 631 REMARK 465 GLU A 632 REMARK 465 ARG A 633 REMARK 465 ARG A 634 REMARK 465 GLU A 635 REMARK 465 ILE A 636 REMARK 465 GLU A 637 REMARK 465 TYR A 638 REMARK 465 PRO A 639 REMARK 465 ARG A 640 REMARK 465 ARG A 641 REMARK 465 GLN A 642 REMARK 465 PHE A 643 REMARK 465 TYR A 644 REMARK 465 ASP A 645 REMARK 465 SER A 646 REMARK 465 LEU A 647 REMARK 465 THR A 648 REMARK 465 ILE A 649 REMARK 465 ARG A 650 REMARK 465 ARG A 651 REMARK 465 ARG B 48 REMARK 465 GLY B 49 REMARK 465 ILE B 50 REMARK 465 ILE B 51 REMARK 465 GLU B 52 REMARK 465 SER B 53 REMARK 465 THR B 54 REMARK 465 ILE B 55 REMARK 465 ASP B 56 REMARK 465 ALA B 57 REMARK 465 ASN B 58 REMARK 465 ALA B 59 REMARK 465 ASN B 60 REMARK 465 VAL B 61 REMARK 465 ARG B 62 REMARK 465 VAL B 63 REMARK 465 ARG B 331 REMARK 465 LEU B 332 REMARK 465 THR B 333 REMARK 465 SER B 334 REMARK 465 SER B 335 REMARK 465 THR B 336 REMARK 465 GLN B 337 REMARK 465 THR B 338 REMARK 465 LEU B 339 REMARK 465 LYS B 340 REMARK 465 LYS B 341 REMARK 465 PHE B 342 REMARK 465 SER B 343 REMARK 465 LEU B 344 REMARK 465 SER B 345 REMARK 465 SER B 346 REMARK 465 GLU B 347 REMARK 465 GLU B 348 REMARK 465 GLU B 349 REMARK 465 GLY B 561 REMARK 465 GLU B 562 REMARK 465 SER B 563 REMARK 465 PHE B 564 REMARK 465 ARG B 633 REMARK 465 ARG B 634 REMARK 465 GLU B 635 REMARK 465 ILE B 636 REMARK 465 GLU B 637 REMARK 465 TYR B 638 REMARK 465 PRO B 639 REMARK 465 ARG B 640 REMARK 465 ARG B 641 REMARK 465 GLN B 642 REMARK 465 PHE B 643 REMARK 465 TYR B 644 REMARK 465 ASP B 645 REMARK 465 SER B 646 REMARK 465 LEU B 647 REMARK 465 THR B 648 REMARK 465 ILE B 649 REMARK 465 ARG B 650 REMARK 465 ARG B 651 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2004 O HOH B 2005 2.08 REMARK 500 O HOH A 2064 O HOH B 2046 2.10 REMARK 500 O HOH A 2064 O HOH A 2065 2.12 REMARK 500 O HOH A 2106 O HOH A 2128 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASN B 533 O HOH B 2009 2555 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 124 -73.90 -83.32 REMARK 500 ASP A 199 -7.89 92.73 REMARK 500 THR A 222 -58.26 80.04 REMARK 500 ASP A 298 78.88 -119.88 REMARK 500 LYS A 370 142.73 -173.01 REMARK 500 ASP A 456 -136.40 -93.64 REMARK 500 ASN A 533 93.73 -64.08 REMARK 500 TYR B 124 -70.06 -86.18 REMARK 500 THR B 222 -69.51 65.88 REMARK 500 ASP B 298 76.83 -117.58 REMARK 500 LYS B 370 145.25 -170.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ILE A 220 ARG A 221 144.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 701 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 207 OE1 REMARK 620 2 GLN A 210 OE1 92.8 REMARK 620 3 DTP A 702 O1A 95.5 94.9 REMARK 620 4 DTP A 702 O1B 177.7 85.6 86.3 REMARK 620 5 DTP A 702 O2G 99.6 166.0 90.3 81.8 REMARK 620 6 HOH A2069 O 97.0 81.8 167.2 81.1 90.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 700 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 594 SG REMARK 620 2 HIS A 598 ND1 96.0 REMARK 620 3 CYS A 605 SG 114.2 110.1 REMARK 620 4 CYS A 608 SG 104.5 125.4 106.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 701 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN B 207 OE1 REMARK 620 2 GLN B 210 OE1 94.9 REMARK 620 3 DTP B 702 O2G 97.9 166.4 REMARK 620 4 DTP B 702 O2B 177.4 87.3 79.9 REMARK 620 5 DTP B 702 O2A 95.6 96.5 86.9 85.6 REMARK 620 6 HOH B2050 O 89.1 86.0 89.5 89.7 174.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 700 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 594 SG REMARK 620 2 HIS B 598 ND1 100.4 REMARK 620 3 CYS B 605 SG 114.4 108.9 REMARK 620 4 CYS B 608 SG 109.5 113.4 110.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTP A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTP B 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SFO A 1631 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SFO B 1633 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4COI RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ANAEROBIC RIBONUCLEOTIDE REDUCTASE FROM REMARK 900 THERMOTOGA MARITIMA WITH GLYCEROL IN THE ACTIVE SITE REMARK 900 RELATED ID: 4COJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ANAEROBIC RIBONUCLEOTIDE REDUCTASE FROM REMARK 900 THERMOTOGA MARITIMA IN COMPLEX WITH DATP AND CTP REMARK 900 RELATED ID: 4COM RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ANAEROBIC RIBONUCLEOTIDE REDUCTASE FROM REMARK 900 THERMOTOGA MARITIMA WITH MES IN THE ACTIVE SITE REMARK 900 RELATED ID: 4CON RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ANAEROBIC RIBONUCLEOTIDE REDUCTASE FROM REMARK 900 THERMOTOGA MARITIMA WITH CITRATE IN THE ACTIVE SITE DBREF 4COL A 1 651 UNP Q9WYL6 Q9WYL6_THEMA 1 651 DBREF 4COL B 1 651 UNP Q9WYL6 Q9WYL6_THEMA 1 651 SEQRES 1 A 651 MET LYS VAL GLN TYR SER PHE GLU ARG GLU PHE GLU GLU SEQRES 2 A 651 LEU MET SER ASP LEU LEU SER LYS TYR GLY TYR GLU MET SEQRES 3 A 651 PHE GLN MET ASP GLY LEU GLY ASP GLN LEU ASP VAL VAL SEQRES 4 A 651 LYS PHE THR GLU ASP PHE VAL ARG ARG GLY ILE ILE GLU SEQRES 5 A 651 SER THR ILE ASP ALA ASN ALA ASN VAL ARG VAL THR ASN SEQRES 6 A 651 ILE SER THR TYR PHE ILE GLU ILE SER LYS PRO HIS THR SEQRES 7 A 651 TYR LEU TYR SER LEU TYR ARG ILE TRP GLN LYS MET LYS SEQRES 8 A 651 GLU MET PHE GLY LYS GLY VAL ALA ASP GLU PHE VAL GLU SEQRES 9 A 651 ALA GLN ILE ASN GLY ALA VAL TYR LEU HIS ASP ARG HIS SEQRES 10 A 651 HIS ALA ALA LEU MET PRO TYR CYS PHE ALA TYR THR LEU SEQRES 11 A 651 LYS PRO ILE VAL GLU LYS GLY LEU PRO PHE ILE LYS THR SEQRES 12 A 651 ILE LYS SER GLU PRO ALA LYS HIS LEU SER THR PHE ILE SEQRES 13 A 651 GLN HIS VAL ILE GLN PHE VAL MET PHE ALA SER ASN GLN SEQRES 14 A 651 SER SER GLY ALA VAL GLY LEU PRO ASP PHE PHE VAL TRP SEQRES 15 A 651 MET TRP TYR PHE VAL LYS LYS ASP LEU LYS GLU GLY ILE SEQRES 16 A 651 ILE PRO ARG ASP LYS LEU ASP TRP TYR ILE GLU GLN HIS SEQRES 17 A 651 PHE GLN ILE LEU THR TYR SER LEU ASN GLN PRO ILE ARG SEQRES 18 A 651 THR THR GLN SER PRO TYR THR ASN PHE THR TYR LEU ASP SEQRES 19 A 651 ARG ASN TYR ILE LYS ALA ILE PHE GLU GLY GLU ARG TYR SEQRES 20 A 651 PRO ASP GLY SER LEU ILE THR ASP HIS VAL GLU ASP ILE SEQRES 21 A 651 ILE ALA LEU GLN LYS HIS TYR TRP GLU TRP VAL SER ARG SEQRES 22 A 651 GLU ARG GLU ARG GLN MET PHE THR PHE PRO VAL LEU THR SEQRES 23 A 651 ALA SER LEU LEU TYR LYS ASP GLY LYS PHE LEU ASP GLU SEQRES 24 A 651 ASP SER ALA ARG PHE ILE ASN LYS ILE ASN MET LYS TRP SEQRES 25 A 651 GLN ASP THR ASN TRP TYR ILE SER ASP SER ILE ASP ALA SEQRES 26 A 651 VAL ALA SER CYS CYS ARG LEU THR SER SER THR GLN THR SEQRES 27 A 651 LEU LYS LYS PHE SER LEU SER SER GLU GLU GLU GLU LYS SEQRES 28 A 651 LEU LYS GLY ARG MET ASN SER ILE GLY GLY SER ASP LEU SEQRES 29 A 651 ASN ILE GLY SER PHE LYS VAL ILE THR VAL ASN LEU PRO SEQRES 30 A 651 ARG ILE ALA LEU GLU SER GLY GLY ASP ARG GLU LYS TYR SEQRES 31 A 651 LEU GLN ILE LEU ARG HIS ARG VAL GLN LEU ILE LYS LYS SEQRES 32 A 651 ALA LEU ALA ALA VAL ARG GLU ILE ILE LYS GLU ARG ILE SEQRES 33 A 651 SER GLU GLY LEU LEU PRO LEU TYR GLU ASN GLY LEU MET SEQRES 34 A 651 LEU LEU ASN ARG GLN TYR GLY THR ILE GLY VAL THR GLY SEQRES 35 A 651 VAL TRP GLU SER ALA SER ILE MET GLY LEU THR THR GLU SEQRES 36 A 651 ASP ILE ASP GLY LEU LYS TYR THR GLU GLU GLY GLU VAL SEQRES 37 A 651 PHE VAL ASP ASN VAL LEU ASP THR ILE ARG GLU GLU ALA SEQRES 38 A 651 GLU LYS GLY TYR HIS GLU TYR GLY PHE THR PHE ASN ILE SEQRES 39 A 651 GLU GLN VAL PRO ALA GLU LYS ALA ALA VAL THR LEU ALA SEQRES 40 A 651 GLN LYS ASP ARG PHE LEU PHE GLY GLU LYS GLN PRO PHE SEQRES 41 A 651 GLU ILE TYR SER ASN GLN TRP VAL PRO LEU MET ALA ASN SEQRES 42 A 651 THR ASP VAL LEU ASN ARG ILE ARG TYR SER GLY LYS TRP SEQRES 43 A 651 ASP LYS LYS VAL SER GLY GLY ALA ILE LEU HIS ILE ASN SEQRES 44 A 651 LEU GLY GLU SER PHE LYS THR GLU GLU GLU SER PHE ASN SEQRES 45 A 651 MET VAL LYS MET ILE ALA ASP MET GLY VAL MET TYR PHE SEQRES 46 A 651 ALA PHE ASN THR LYS ILE SER VAL CYS GLU ASP GLY HIS SEQRES 47 A 651 ALA PHE TYR GLY GLU ARG CYS PRO VAL CYS GLY LYS ALA SEQRES 48 A 651 LYS VAL ASP GLU TYR MET ARG ILE VAL GLY TYR LEU VAL SEQRES 49 A 651 PRO VAL SER ALA PHE ASN LYS GLU ARG ARG GLU ILE GLU SEQRES 50 A 651 TYR PRO ARG ARG GLN PHE TYR ASP SER LEU THR ILE ARG SEQRES 51 A 651 ARG SEQRES 1 B 651 MET LYS VAL GLN TYR SER PHE GLU ARG GLU PHE GLU GLU SEQRES 2 B 651 LEU MET SER ASP LEU LEU SER LYS TYR GLY TYR GLU MET SEQRES 3 B 651 PHE GLN MET ASP GLY LEU GLY ASP GLN LEU ASP VAL VAL SEQRES 4 B 651 LYS PHE THR GLU ASP PHE VAL ARG ARG GLY ILE ILE GLU SEQRES 5 B 651 SER THR ILE ASP ALA ASN ALA ASN VAL ARG VAL THR ASN SEQRES 6 B 651 ILE SER THR TYR PHE ILE GLU ILE SER LYS PRO HIS THR SEQRES 7 B 651 TYR LEU TYR SER LEU TYR ARG ILE TRP GLN LYS MET LYS SEQRES 8 B 651 GLU MET PHE GLY LYS GLY VAL ALA ASP GLU PHE VAL GLU SEQRES 9 B 651 ALA GLN ILE ASN GLY ALA VAL TYR LEU HIS ASP ARG HIS SEQRES 10 B 651 HIS ALA ALA LEU MET PRO TYR CYS PHE ALA TYR THR LEU SEQRES 11 B 651 LYS PRO ILE VAL GLU LYS GLY LEU PRO PHE ILE LYS THR SEQRES 12 B 651 ILE LYS SER GLU PRO ALA LYS HIS LEU SER THR PHE ILE SEQRES 13 B 651 GLN HIS VAL ILE GLN PHE VAL MET PHE ALA SER ASN GLN SEQRES 14 B 651 SER SER GLY ALA VAL GLY LEU PRO ASP PHE PHE VAL TRP SEQRES 15 B 651 MET TRP TYR PHE VAL LYS LYS ASP LEU LYS GLU GLY ILE SEQRES 16 B 651 ILE PRO ARG ASP LYS LEU ASP TRP TYR ILE GLU GLN HIS SEQRES 17 B 651 PHE GLN ILE LEU THR TYR SER LEU ASN GLN PRO ILE ARG SEQRES 18 B 651 THR THR GLN SER PRO TYR THR ASN PHE THR TYR LEU ASP SEQRES 19 B 651 ARG ASN TYR ILE LYS ALA ILE PHE GLU GLY GLU ARG TYR SEQRES 20 B 651 PRO ASP GLY SER LEU ILE THR ASP HIS VAL GLU ASP ILE SEQRES 21 B 651 ILE ALA LEU GLN LYS HIS TYR TRP GLU TRP VAL SER ARG SEQRES 22 B 651 GLU ARG GLU ARG GLN MET PHE THR PHE PRO VAL LEU THR SEQRES 23 B 651 ALA SER LEU LEU TYR LYS ASP GLY LYS PHE LEU ASP GLU SEQRES 24 B 651 ASP SER ALA ARG PHE ILE ASN LYS ILE ASN MET LYS TRP SEQRES 25 B 651 GLN ASP THR ASN TRP TYR ILE SER ASP SER ILE ASP ALA SEQRES 26 B 651 VAL ALA SER CYS CYS ARG LEU THR SER SER THR GLN THR SEQRES 27 B 651 LEU LYS LYS PHE SER LEU SER SER GLU GLU GLU GLU LYS SEQRES 28 B 651 LEU LYS GLY ARG MET ASN SER ILE GLY GLY SER ASP LEU SEQRES 29 B 651 ASN ILE GLY SER PHE LYS VAL ILE THR VAL ASN LEU PRO SEQRES 30 B 651 ARG ILE ALA LEU GLU SER GLY GLY ASP ARG GLU LYS TYR SEQRES 31 B 651 LEU GLN ILE LEU ARG HIS ARG VAL GLN LEU ILE LYS LYS SEQRES 32 B 651 ALA LEU ALA ALA VAL ARG GLU ILE ILE LYS GLU ARG ILE SEQRES 33 B 651 SER GLU GLY LEU LEU PRO LEU TYR GLU ASN GLY LEU MET SEQRES 34 B 651 LEU LEU ASN ARG GLN TYR GLY THR ILE GLY VAL THR GLY SEQRES 35 B 651 VAL TRP GLU SER ALA SER ILE MET GLY LEU THR THR GLU SEQRES 36 B 651 ASP ILE ASP GLY LEU LYS TYR THR GLU GLU GLY GLU VAL SEQRES 37 B 651 PHE VAL ASP ASN VAL LEU ASP THR ILE ARG GLU GLU ALA SEQRES 38 B 651 GLU LYS GLY TYR HIS GLU TYR GLY PHE THR PHE ASN ILE SEQRES 39 B 651 GLU GLN VAL PRO ALA GLU LYS ALA ALA VAL THR LEU ALA SEQRES 40 B 651 GLN LYS ASP ARG PHE LEU PHE GLY GLU LYS GLN PRO PHE SEQRES 41 B 651 GLU ILE TYR SER ASN GLN TRP VAL PRO LEU MET ALA ASN SEQRES 42 B 651 THR ASP VAL LEU ASN ARG ILE ARG TYR SER GLY LYS TRP SEQRES 43 B 651 ASP LYS LYS VAL SER GLY GLY ALA ILE LEU HIS ILE ASN SEQRES 44 B 651 LEU GLY GLU SER PHE LYS THR GLU GLU GLU SER PHE ASN SEQRES 45 B 651 MET VAL LYS MET ILE ALA ASP MET GLY VAL MET TYR PHE SEQRES 46 B 651 ALA PHE ASN THR LYS ILE SER VAL CYS GLU ASP GLY HIS SEQRES 47 B 651 ALA PHE TYR GLY GLU ARG CYS PRO VAL CYS GLY LYS ALA SEQRES 48 B 651 LYS VAL ASP GLU TYR MET ARG ILE VAL GLY TYR LEU VAL SEQRES 49 B 651 PRO VAL SER ALA PHE ASN LYS GLU ARG ARG GLU ILE GLU SEQRES 50 B 651 TYR PRO ARG ARG GLN PHE TYR ASP SER LEU THR ILE ARG SEQRES 51 B 651 ARG HET ZN A 700 1 HET MG A 701 1 HET DTP A 702 42 HET SFO A1631 7 HET ZN B 700 1 HET MG B 701 1 HET DTP B 702 42 HET SFO B1633 7 HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION HETNAM DTP 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE HETNAM SFO SULFONIC ACID FORMUL 3 ZN 2(ZN 2+) FORMUL 4 MG 2(MG 2+) FORMUL 5 DTP 2(C10 H16 N5 O12 P3) FORMUL 6 SFO 2(H3 O3 S) FORMUL 11 HOH *354(H2 O) HELIX 1 1 GLU A 8 GLY A 23 1 16 HELIX 2 2 GLY A 23 GLY A 31 1 9 HELIX 3 3 GLY A 33 LEU A 36 5 4 HELIX 4 4 ASP A 37 VAL A 46 1 10 HELIX 5 5 ASN A 65 ILE A 73 1 9 HELIX 6 6 SER A 74 GLY A 95 1 22 HELIX 7 7 GLY A 95 ASN A 108 1 14 HELIX 8 8 LEU A 130 GLY A 137 1 8 HELIX 9 9 HIS A 151 ASN A 168 1 18 HELIX 10 10 ASP A 178 GLU A 193 1 16 HELIX 11 11 LYS A 200 LEU A 216 1 17 HELIX 12 12 ASP A 234 PHE A 242 1 9 HELIX 13 13 ILE A 253 ASP A 255 5 3 HELIX 14 14 HIS A 256 GLN A 278 1 23 HELIX 15 15 ASP A 298 ASN A 309 1 12 HELIX 16 16 ILE A 323 ALA A 327 5 5 HELIX 17 17 LEU A 376 GLY A 384 1 9 HELIX 18 18 ASP A 386 GLU A 418 1 33 HELIX 19 19 LEU A 421 ASN A 426 1 6 HELIX 20 20 LEU A 430 ASN A 432 5 3 HELIX 21 21 GLY A 442 MET A 450 1 9 HELIX 22 22 THR A 463 GLY A 489 1 27 HELIX 23 23 LYS A 501 GLY A 515 1 15 HELIX 24 24 GLU A 516 GLN A 518 5 3 HELIX 25 25 ASP A 535 ASP A 547 1 13 HELIX 26 26 LYS A 548 SER A 551 5 4 HELIX 27 27 THR A 566 MET A 580 1 15 HELIX 28 28 VAL A 626 ASN A 630 1 5 HELIX 29 29 GLU B 8 GLY B 23 1 16 HELIX 30 30 GLY B 23 GLY B 31 1 9 HELIX 31 31 GLY B 33 LEU B 36 5 4 HELIX 32 32 ASP B 37 ARG B 47 1 11 HELIX 33 33 ASN B 65 ILE B 73 1 9 HELIX 34 34 SER B 74 GLY B 95 1 22 HELIX 35 35 GLY B 95 ASN B 108 1 14 HELIX 36 36 ASP B 115 ALA B 119 5 5 HELIX 37 37 LEU B 130 GLY B 137 1 8 HELIX 38 38 HIS B 151 ASN B 168 1 18 HELIX 39 39 ASP B 178 GLU B 193 1 16 HELIX 40 40 PRO B 197 ASP B 199 5 3 HELIX 41 41 LYS B 200 ASN B 217 1 18 HELIX 42 42 ASP B 234 GLU B 243 1 10 HELIX 43 43 ILE B 253 ASP B 255 5 3 HELIX 44 44 HIS B 256 GLN B 278 1 23 HELIX 45 45 ASP B 298 ASN B 309 1 12 HELIX 46 46 ILE B 323 ALA B 327 5 5 HELIX 47 47 LEU B 376 GLY B 384 1 9 HELIX 48 48 ASP B 386 GLU B 418 1 33 HELIX 49 49 LEU B 421 ASN B 426 1 6 HELIX 50 50 LEU B 430 ASN B 432 5 3 HELIX 51 51 GLY B 442 MET B 450 1 9 HELIX 52 52 THR B 463 GLY B 489 1 27 HELIX 53 53 LYS B 501 GLY B 515 1 15 HELIX 54 54 GLU B 516 GLN B 518 5 3 HELIX 55 55 ASP B 535 ASP B 547 1 13 HELIX 56 56 LYS B 548 SER B 551 5 4 HELIX 57 57 THR B 566 MET B 580 1 15 HELIX 58 58 VAL B 626 GLU B 632 1 7 SHEET 1 AA 2 LYS A 2 GLN A 4 0 SHEET 2 AA 2 LYS B 2 GLN B 4 -1 O VAL B 3 N VAL A 3 SHEET 1 AB 2 VAL A 111 LEU A 113 0 SHEET 2 AB 2 GLY A 367 ASN A 375 1 O THR A 373 N TYR A 112 SHEET 1 AC 2 LYS A 295 PHE A 296 0 SHEET 2 AC 2 VAL A 284 LYS A 292 -1 O LYS A 292 N LYS A 295 SHEET 1 AD 8 PHE A 492 GLN A 496 0 SHEET 2 AD 8 GLN A 434 THR A 441 1 O GLY A 436 N ASN A 493 SHEET 3 AD 8 GLY A 367 ASN A 375 1 O GLY A 367 N TYR A 435 SHEET 4 AD 8 CYS A 125 ALA A 127 -1 O CYS A 125 N SER A 368 SHEET 5 AD 8 VAL A 174 LEU A 176 1 N GLY A 175 O PHE A 126 SHEET 6 AD 8 THR A 228 LEU A 233 1 O ASN A 229 N LEU A 176 SHEET 7 AD 8 VAL A 284 LYS A 292 1 O VAL A 284 N PHE A 230 SHEET 8 AD 8 LYS A 295 PHE A 296 -1 O LYS A 295 N LYS A 292 SHEET 1 AE 4 PHE A 492 GLN A 496 0 SHEET 2 AE 4 GLN A 434 THR A 441 1 O GLY A 436 N ASN A 493 SHEET 3 AE 4 GLY A 367 ASN A 375 1 O GLY A 367 N TYR A 435 SHEET 4 AE 4 VAL A 111 LEU A 113 1 O TYR A 112 N THR A 373 SHEET 1 AF 5 LEU A 556 ASN A 559 0 SHEET 2 AF 5 TYR A 584 ASN A 588 1 O TYR A 584 N LEU A 556 SHEET 3 AF 5 THR A 315 SER A 320 -1 O TRP A 317 N PHE A 585 SHEET 4 AF 5 VAL A 284 LYS A 292 1 O LEU A 285 N ASN A 316 SHEET 5 AF 5 LYS A 295 PHE A 296 -1 O LYS A 295 N LYS A 292 SHEET 1 AG10 PHE A 492 GLN A 496 0 SHEET 2 AG10 GLN A 434 THR A 441 1 O GLY A 436 N ASN A 493 SHEET 3 AG10 GLY A 367 ASN A 375 1 O GLY A 367 N TYR A 435 SHEET 4 AG10 CYS A 125 ALA A 127 -1 O CYS A 125 N SER A 368 SHEET 5 AG10 VAL A 174 LEU A 176 1 N GLY A 175 O PHE A 126 SHEET 6 AG10 THR A 228 LEU A 233 1 O ASN A 229 N LEU A 176 SHEET 7 AG10 VAL A 284 LYS A 292 1 O VAL A 284 N PHE A 230 SHEET 8 AG10 THR A 315 SER A 320 1 O ASN A 316 N ALA A 287 SHEET 9 AG10 TYR A 584 ASN A 588 -1 O PHE A 585 N TRP A 317 SHEET 10 AG10 LEU A 556 ASN A 559 1 O LEU A 556 N ALA A 586 SHEET 1 AH10 LEU A 556 ASN A 559 0 SHEET 2 AH10 TYR A 584 ASN A 588 1 O TYR A 584 N LEU A 556 SHEET 3 AH10 THR A 315 SER A 320 -1 O TRP A 317 N PHE A 585 SHEET 4 AH10 VAL A 284 LYS A 292 1 O LEU A 285 N ASN A 316 SHEET 5 AH10 THR A 228 LEU A 233 1 O THR A 228 N VAL A 284 SHEET 6 AH10 VAL A 174 LEU A 176 1 O VAL A 174 N ASN A 229 SHEET 7 AH10 CYS A 125 ALA A 127 1 O PHE A 126 N GLY A 175 SHEET 8 AH10 GLY A 367 ASN A 375 -1 O SER A 368 N CYS A 125 SHEET 9 AH10 GLN A 434 THR A 441 1 O TYR A 435 N PHE A 369 SHEET 10 AH10 PHE A 492 GLN A 496 1 O ASN A 493 N ILE A 438 SHEET 1 AI 9 LEU A 556 ASN A 559 0 SHEET 2 AI 9 TYR A 584 ASN A 588 1 O TYR A 584 N LEU A 556 SHEET 3 AI 9 THR A 315 SER A 320 -1 O TRP A 317 N PHE A 585 SHEET 4 AI 9 VAL A 284 LYS A 292 1 O LEU A 285 N ASN A 316 SHEET 5 AI 9 THR A 228 LEU A 233 1 O THR A 228 N VAL A 284 SHEET 6 AI 9 VAL A 174 LEU A 176 1 O VAL A 174 N ASN A 229 SHEET 7 AI 9 CYS A 125 ALA A 127 1 O PHE A 126 N GLY A 175 SHEET 8 AI 9 GLY A 367 ASN A 375 -1 O SER A 368 N CYS A 125 SHEET 9 AI 9 VAL A 111 LEU A 113 1 O TYR A 112 N THR A 373 SHEET 1 AJ 2 THR A 453 GLU A 455 0 SHEET 2 AJ 2 LEU A 460 TYR A 462 -1 O LYS A 461 N THR A 454 SHEET 1 AK 4 ALA A 599 PHE A 600 0 SHEET 2 AK 4 ILE A 591 VAL A 593 -1 O SER A 592 N PHE A 600 SHEET 3 AK 4 ASP A 614 ARG A 618 -1 O ASP A 614 N VAL A 593 SHEET 4 AK 4 LEU A 623 PRO A 625 -1 O VAL A 624 N MET A 617 SHEET 1 BA 2 VAL B 111 LEU B 113 0 SHEET 2 BA 2 ILE B 366 ASN B 375 1 O THR B 373 N TYR B 112 SHEET 1 BB 2 LYS B 295 PHE B 296 0 SHEET 2 BB 2 VAL B 284 LYS B 292 -1 O LYS B 292 N LYS B 295 SHEET 1 BC 8 PHE B 492 GLN B 496 0 SHEET 2 BC 8 GLN B 434 THR B 441 1 O GLY B 436 N ASN B 493 SHEET 3 BC 8 ILE B 366 ASN B 375 1 O GLY B 367 N TYR B 435 SHEET 4 BC 8 CYS B 125 ALA B 127 -1 O CYS B 125 N SER B 368 SHEET 5 BC 8 VAL B 174 GLY B 175 1 N GLY B 175 O PHE B 126 SHEET 6 BC 8 THR B 228 LEU B 233 1 N ASN B 229 O VAL B 174 SHEET 7 BC 8 VAL B 284 LYS B 292 1 O VAL B 284 N PHE B 230 SHEET 8 BC 8 LYS B 295 PHE B 296 -1 O LYS B 295 N LYS B 292 SHEET 1 BD 4 PHE B 492 GLN B 496 0 SHEET 2 BD 4 GLN B 434 THR B 441 1 O GLY B 436 N ASN B 493 SHEET 3 BD 4 ILE B 366 ASN B 375 1 O GLY B 367 N TYR B 435 SHEET 4 BD 4 VAL B 111 LEU B 113 1 O TYR B 112 N THR B 373 SHEET 1 BE 5 LEU B 556 ASN B 559 0 SHEET 2 BE 5 TYR B 584 ASN B 588 1 O TYR B 584 N LEU B 556 SHEET 3 BE 5 THR B 315 SER B 320 -1 O TRP B 317 N PHE B 585 SHEET 4 BE 5 VAL B 284 LYS B 292 1 O LEU B 285 N ASN B 316 SHEET 5 BE 5 LYS B 295 PHE B 296 -1 O LYS B 295 N LYS B 292 SHEET 1 BF10 PHE B 492 GLN B 496 0 SHEET 2 BF10 GLN B 434 THR B 441 1 O GLY B 436 N ASN B 493 SHEET 3 BF10 ILE B 366 ASN B 375 1 O GLY B 367 N TYR B 435 SHEET 4 BF10 CYS B 125 ALA B 127 -1 O CYS B 125 N SER B 368 SHEET 5 BF10 VAL B 174 GLY B 175 1 N GLY B 175 O PHE B 126 SHEET 6 BF10 THR B 228 LEU B 233 1 N ASN B 229 O VAL B 174 SHEET 7 BF10 VAL B 284 LYS B 292 1 O VAL B 284 N PHE B 230 SHEET 8 BF10 THR B 315 SER B 320 1 O ASN B 316 N ALA B 287 SHEET 9 BF10 TYR B 584 ASN B 588 -1 O PHE B 585 N TRP B 317 SHEET 10 BF10 LEU B 556 ASN B 559 1 O LEU B 556 N ALA B 586 SHEET 1 BG10 LEU B 556 ASN B 559 0 SHEET 2 BG10 TYR B 584 ASN B 588 1 O TYR B 584 N LEU B 556 SHEET 3 BG10 THR B 315 SER B 320 -1 O TRP B 317 N PHE B 585 SHEET 4 BG10 VAL B 284 LYS B 292 1 O LEU B 285 N ASN B 316 SHEET 5 BG10 THR B 228 LEU B 233 1 O THR B 228 N VAL B 284 SHEET 6 BG10 VAL B 174 GLY B 175 1 O VAL B 174 N ASN B 229 SHEET 7 BG10 CYS B 125 ALA B 127 1 O PHE B 126 N GLY B 175 SHEET 8 BG10 ILE B 366 ASN B 375 -1 O ILE B 366 N ALA B 127 SHEET 9 BG10 GLN B 434 THR B 441 1 O TYR B 435 N PHE B 369 SHEET 10 BG10 PHE B 492 GLN B 496 1 O ASN B 493 N ILE B 438 SHEET 1 BH 9 LEU B 556 ASN B 559 0 SHEET 2 BH 9 TYR B 584 ASN B 588 1 O TYR B 584 N LEU B 556 SHEET 3 BH 9 THR B 315 SER B 320 -1 O TRP B 317 N PHE B 585 SHEET 4 BH 9 VAL B 284 LYS B 292 1 O LEU B 285 N ASN B 316 SHEET 5 BH 9 THR B 228 LEU B 233 1 O THR B 228 N VAL B 284 SHEET 6 BH 9 VAL B 174 GLY B 175 1 O VAL B 174 N ASN B 229 SHEET 7 BH 9 CYS B 125 ALA B 127 1 O PHE B 126 N GLY B 175 SHEET 8 BH 9 ILE B 366 ASN B 375 -1 O ILE B 366 N ALA B 127 SHEET 9 BH 9 VAL B 111 LEU B 113 1 O TYR B 112 N THR B 373 SHEET 1 BI 2 THR B 453 ASP B 456 0 SHEET 2 BI 2 GLY B 459 TYR B 462 -1 O GLY B 459 N ASP B 456 SHEET 1 BJ 4 ALA B 599 PHE B 600 0 SHEET 2 BJ 4 ILE B 591 CYS B 594 -1 O SER B 592 N PHE B 600 SHEET 3 BJ 4 LYS B 612 ARG B 618 -1 N VAL B 613 O VAL B 593 SHEET 4 BJ 4 LEU B 623 PRO B 625 -1 O VAL B 624 N MET B 617 LINK OE1 GLN A 207 MG MG A 701 1555 1555 1.95 LINK OE1 GLN A 210 MG MG A 701 1555 1555 2.11 LINK SG CYS A 594 ZN ZN A 700 1555 1555 2.32 LINK ND1 HIS A 598 ZN ZN A 700 1555 1555 2.03 LINK SG CYS A 605 ZN ZN A 700 1555 1555 2.32 LINK SG CYS A 608 ZN ZN A 700 1555 1555 2.39 LINK MG MG A 701 O1A DTP A 702 1555 1555 2.03 LINK MG MG A 701 O1B DTP A 702 1555 1555 2.07 LINK MG MG A 701 O2G DTP A 702 1555 1555 2.05 LINK MG MG A 701 O HOH A2069 1555 1555 2.20 LINK OE1 GLN B 207 MG MG B 701 1555 1555 1.96 LINK OE1 GLN B 210 MG MG B 701 1555 1555 2.08 LINK SG CYS B 594 ZN ZN B 700 1555 1555 2.27 LINK ND1 HIS B 598 ZN ZN B 700 1555 1555 2.03 LINK SG CYS B 605 ZN ZN B 700 1555 1555 2.27 LINK SG CYS B 608 ZN ZN B 700 1555 1555 2.25 LINK MG MG B 701 O2G DTP B 702 1555 1555 2.06 LINK MG MG B 701 O2B DTP B 702 1555 1555 2.09 LINK MG MG B 701 O2A DTP B 702 1555 1555 2.02 LINK MG MG B 701 O HOH B2050 1555 1555 2.14 CISPEP 1 PHE A 282 PRO A 283 0 -7.83 CISPEP 2 PHE B 282 PRO B 283 0 -3.09 SITE 1 AC1 4 CYS A 594 HIS A 598 CYS A 605 CYS A 608 SITE 1 AC2 4 GLN A 207 GLN A 210 DTP A 702 HOH A2069 SITE 1 AC3 18 TRP A 203 GLN A 207 GLN A 210 ILE A 211 SITE 2 AC3 18 TYR A 214 SER A 215 MG A 701 HOH A2069 SITE 3 AC3 18 HOH A2071 SER B 146 GLU B 147 ALA B 149 SITE 4 AC3 18 LYS B 150 HIS B 151 THR B 154 GLN B 157 SITE 5 AC3 18 HIS B 158 GLN B 161 SITE 1 AC4 4 CYS B 594 HIS B 598 CYS B 605 CYS B 608 SITE 1 AC5 4 GLN B 207 GLN B 210 DTP B 702 HOH B2050 SITE 1 AC6 19 SER A 146 GLU A 147 ALA A 149 LYS A 150 SITE 2 AC6 19 HIS A 151 THR A 154 GLN A 157 HIS A 158 SITE 3 AC6 19 GLN A 161 HOH A2046 TRP B 203 GLN B 207 SITE 4 AC6 19 GLN B 210 ILE B 211 TYR B 214 SER B 215 SITE 5 AC6 19 MG B 701 HOH B2050 HOH B2052 SITE 1 AC7 3 TYR A 112 HIS A 114 ASP A 115 SITE 1 AC8 4 TYR B 112 HIS B 114 ASP B 115 LYS B 501 CRYST1 78.000 94.120 86.710 90.00 112.03 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012821 0.000000 0.005188 0.00000 SCALE2 0.000000 0.010625 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012441 0.00000 MTRIX1 1 0.676200 -0.010910 -0.736600 22.73000 1 MTRIX2 1 -0.017320 -0.999800 -0.001091 7.52400 1 MTRIX3 1 -0.736500 0.013500 -0.676300 51.74000 1