HEADER CELL ADHESION 31-JAN-14 4COW TITLE CRYSTAL STRUCTURE OF EPITHELIAL ADHESIN 6 A DOMAIN (EPA6A) FROM TITLE 2 CANDIDA GLABRATA IN COMPLEX WITH THE T-ANTIGEN (GALB1-3GALNAC) COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPITHELIAL ADHESIN 6; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ADHESION DOMAIN (A DOMAIN), RESIDUES 26-471; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA GLABRATA; SOURCE 3 ORGANISM_TAXID: 284593; SOURCE 4 STRAIN: CBS 138; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI B; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 37762; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: SHUFFLE T7 EXPRESS (C3029); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET28A KEYWDS CELL ADHESION, LECTIN, TISSUE INVASION, PATHOGENICITY EXPDTA X-RAY DIFFRACTION AUTHOR M.KOCK,M.MAESTRE-REYNA,R.DIDERRICH,H.-U.MOESCH,L.-O.ESSEN REVDAT 9 20-DEC-23 4COW 1 HETSYN LINK REVDAT 8 29-JUL-20 4COW 1 COMPND REMARK HETNAM LINK REVDAT 8 2 1 SITE ATOM REVDAT 7 22-MAY-19 4COW 1 REMARK REVDAT 6 08-MAY-19 4COW 1 REMARK LINK REVDAT 5 07-MAR-18 4COW 1 SOURCE REMARK REVDAT 4 19-AUG-15 4COW 1 JRNL REVDAT 3 08-JUL-15 4COW 1 REVDAT JRNL REMARK REVDAT 2 01-JUL-15 4COW 1 JRNL REMARK REVDAT 1 18-FEB-15 4COW 0 JRNL AUTH R.DIDERRICH,M.KOCK,M.MAESTRE-REYNA,S.RUPP,L.-O.ESSEN, JRNL AUTH 2 H.-U.MOESCH JRNL TITL STRUCTURAL HOTSPOTS DETERMINE FUNCTIONAL DIVERSITY OF THE JRNL TITL 2 CANDIDA GLABRATA EPITHELIAL ADHESIN FAMILY JRNL REF J.BIOL.CHEM. V. 290 19597 2015 JRNL REFN ISSN 0021-9258 JRNL PMID 26105055 JRNL DOI 10.1074/JBC.M115.655654 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 14534 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 740 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.21 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1066 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.2140 REMARK 3 BIN FREE R VALUE SET COUNT : 36 REMARK 3 BIN FREE R VALUE : 0.2020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1795 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 43 REMARK 3 SOLVENT ATOMS : 200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.17000 REMARK 3 B22 (A**2) : 0.88000 REMARK 3 B33 (A**2) : -1.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.221 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.189 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.127 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.713 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1914 ; 0.009 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1668 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2612 ; 1.323 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3846 ; 0.760 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 231 ; 6.297 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 94 ;36.077 ;24.362 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 270 ;13.967 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ; 7.833 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 278 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2186 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 462 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 910 ; 1.160 ; 1.315 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 908 ; 1.157 ; 1.310 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1136 ; 2.145 ; 1.961 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1004 ; 0.954 ; 1.412 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 44 A 67 REMARK 3 ORIGIN FOR THE GROUP (A): 4.9450 -4.8470 127.0430 REMARK 3 T TENSOR REMARK 3 T11: 0.0589 T22: 0.0690 REMARK 3 T33: 0.1121 T12: 0.0551 REMARK 3 T13: 0.0411 T23: 0.0533 REMARK 3 L TENSOR REMARK 3 L11: 0.2404 L22: 1.8268 REMARK 3 L33: 3.6419 L12: 0.5687 REMARK 3 L13: -0.3171 L23: -1.9685 REMARK 3 S TENSOR REMARK 3 S11: 0.0040 S12: 0.0240 S13: -0.0319 REMARK 3 S21: -0.0478 S22: -0.0151 S23: -0.1076 REMARK 3 S31: 0.1080 S32: 0.0511 S33: 0.0111 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 68 A 81 REMARK 3 ORIGIN FOR THE GROUP (A): -0.6410 24.7370 109.4130 REMARK 3 T TENSOR REMARK 3 T11: 0.0579 T22: 0.1631 REMARK 3 T33: 0.1732 T12: -0.0018 REMARK 3 T13: -0.0056 T23: 0.1087 REMARK 3 L TENSOR REMARK 3 L11: 6.8606 L22: 0.9300 REMARK 3 L33: 2.3734 L12: 1.7525 REMARK 3 L13: -2.5279 L23: -1.4715 REMARK 3 S TENSOR REMARK 3 S11: 0.2867 S12: 0.1951 S13: 0.7655 REMARK 3 S21: 0.0574 S22: 0.0538 S23: 0.1914 REMARK 3 S31: -0.0601 S32: -0.1713 S33: -0.3406 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 82 A 127 REMARK 3 ORIGIN FOR THE GROUP (A): 6.1590 13.4810 117.8240 REMARK 3 T TENSOR REMARK 3 T11: 0.0666 T22: 0.0654 REMARK 3 T33: 0.0721 T12: -0.0103 REMARK 3 T13: -0.0038 T23: 0.0143 REMARK 3 L TENSOR REMARK 3 L11: 1.2788 L22: 0.7085 REMARK 3 L33: 1.5144 L12: -0.4985 REMARK 3 L13: -0.2336 L23: -0.7760 REMARK 3 S TENSOR REMARK 3 S11: -0.0285 S12: -0.0155 S13: 0.0248 REMARK 3 S21: 0.0541 S22: 0.0209 S23: -0.0224 REMARK 3 S31: -0.0491 S32: -0.0134 S33: 0.0076 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 128 A 150 REMARK 3 ORIGIN FOR THE GROUP (A): 10.6710 8.4390 122.0400 REMARK 3 T TENSOR REMARK 3 T11: 0.1046 T22: 0.1323 REMARK 3 T33: 0.0707 T12: 0.0258 REMARK 3 T13: -0.0082 T23: 0.0276 REMARK 3 L TENSOR REMARK 3 L11: 1.0344 L22: 2.0209 REMARK 3 L33: 1.2965 L12: 1.2251 REMARK 3 L13: -0.9995 L23: -1.1201 REMARK 3 S TENSOR REMARK 3 S11: -0.0363 S12: -0.0433 S13: -0.0751 REMARK 3 S21: 0.1436 S22: -0.0339 S23: -0.1230 REMARK 3 S31: 0.0231 S32: 0.2125 S33: 0.0703 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 151 A 193 REMARK 3 ORIGIN FOR THE GROUP (A): -1.8930 0.6360 127.9630 REMARK 3 T TENSOR REMARK 3 T11: 0.1285 T22: 0.0948 REMARK 3 T33: 0.1394 T12: -0.0327 REMARK 3 T13: 0.0848 T23: -0.0245 REMARK 3 L TENSOR REMARK 3 L11: 0.2332 L22: 1.0322 REMARK 3 L33: 2.0104 L12: 0.4866 REMARK 3 L13: -0.6421 L23: -1.2767 REMARK 3 S TENSOR REMARK 3 S11: 0.0343 S12: -0.0260 S13: 0.0418 REMARK 3 S21: 0.1074 S22: -0.0811 S23: 0.1255 REMARK 3 S31: 0.0345 S32: -0.0100 S33: 0.0467 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 194 A 215 REMARK 3 ORIGIN FOR THE GROUP (A): -4.8860 7.8580 133.3840 REMARK 3 T TENSOR REMARK 3 T11: 0.1489 T22: 0.1273 REMARK 3 T33: 0.1428 T12: 0.0159 REMARK 3 T13: 0.0805 T23: 0.0534 REMARK 3 L TENSOR REMARK 3 L11: 1.1586 L22: 2.7282 REMARK 3 L33: 2.2314 L12: -0.5382 REMARK 3 L13: 1.2024 L23: -1.8856 REMARK 3 S TENSOR REMARK 3 S11: -0.0129 S12: -0.1826 S13: 0.0792 REMARK 3 S21: 0.2586 S22: 0.2456 S23: 0.5128 REMARK 3 S31: -0.0319 S32: -0.3998 S33: -0.2327 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 216 A 238 REMARK 3 ORIGIN FOR THE GROUP (A): 2.4300 9.2320 128.0370 REMARK 3 T TENSOR REMARK 3 T11: 0.1521 T22: 0.0742 REMARK 3 T33: 0.0845 T12: 0.0292 REMARK 3 T13: 0.0249 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 0.2373 L22: 1.6326 REMARK 3 L33: 1.1194 L12: 0.4723 REMARK 3 L13: -0.3530 L23: -1.0663 REMARK 3 S TENSOR REMARK 3 S11: 0.0135 S12: -0.0155 S13: 0.0393 REMARK 3 S21: 0.1987 S22: 0.0026 S23: -0.0088 REMARK 3 S31: -0.0748 S32: 0.0660 S33: -0.0161 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 239 A 258 REMARK 3 ORIGIN FOR THE GROUP (A): 7.7900 0.1320 135.9960 REMARK 3 T TENSOR REMARK 3 T11: 0.1834 T22: 0.2174 REMARK 3 T33: 0.0828 T12: -0.0707 REMARK 3 T13: -0.0125 T23: 0.1003 REMARK 3 L TENSOR REMARK 3 L11: 1.2352 L22: 6.4850 REMARK 3 L33: 6.4749 L12: 2.4453 REMARK 3 L13: 0.4889 L23: 4.1527 REMARK 3 S TENSOR REMARK 3 S11: 0.2941 S12: -0.4784 S13: -0.1906 REMARK 3 S21: 0.6549 S22: -0.7328 S23: -0.1298 REMARK 3 S31: 0.4252 S32: 0.2168 S33: 0.4387 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 259 A 268 REMARK 3 ORIGIN FOR THE GROUP (A): -1.7170 -17.2300 130.1950 REMARK 3 T TENSOR REMARK 3 T11: 0.3107 T22: 0.0729 REMARK 3 T33: 0.0411 T12: -0.0463 REMARK 3 T13: 0.0655 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 1.4601 L22: 6.5360 REMARK 3 L33: 16.3624 L12: 0.9352 REMARK 3 L13: -4.6789 L23: -5.8396 REMARK 3 S TENSOR REMARK 3 S11: -0.0222 S12: 0.0430 S13: -0.1938 REMARK 3 S21: 0.1261 S22: -0.6198 S23: -0.2110 REMARK 3 S31: -0.0744 S32: 0.1720 S33: 0.6420 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES WITH TLS ADDED REMARK 4 REMARK 4 4COW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1290059628. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.826606 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18879 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 34.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.60000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4AF9 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.08 M SODIUM ACETATE PH:4.6, 1.6 M REMARK 280 AMMONIUM SULFATE, 20% GLYCEROL, 0.05 M LACTOSE, 291 K, VAPOR REMARK 280 DIFFUSION IN SITTING DROP, SOAKED WITH GALB1-3GALNAC, VAPOR REMARK 280 DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.67500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.30500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.55000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.30500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.67500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.55000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 5 REMARK 465 GLY A 6 REMARK 465 SER A 7 REMARK 465 SER A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 HIS A 12 REMARK 465 HIS A 13 REMARK 465 HIS A 14 REMARK 465 SER A 15 REMARK 465 SER A 16 REMARK 465 GLY A 17 REMARK 465 LEU A 18 REMARK 465 VAL A 19 REMARK 465 PRO A 20 REMARK 465 ARG A 21 REMARK 465 GLY A 22 REMARK 465 SER A 23 REMARK 465 HIS A 24 REMARK 465 MET A 25 REMARK 465 LYS A 26 REMARK 465 ASP A 27 REMARK 465 ASP A 28 REMARK 465 TYR A 29 REMARK 465 SER A 30 REMARK 465 SER A 31 REMARK 465 SER A 32 REMARK 465 LEU A 33 REMARK 465 SER A 34 REMARK 465 ASN A 35 REMARK 465 ASN A 36 REMARK 465 ASN A 37 REMARK 465 LEU A 38 REMARK 465 GLY A 39 REMARK 465 TRP A 40 REMARK 465 THR A 41 REMARK 465 ASP A 42 REMARK 465 PRO A 43 REMARK 465 THR A 270 REMARK 465 SER A 271 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 46 76.11 -116.54 REMARK 500 SER A 73 12.55 -64.65 REMARK 500 PRO A 77 -176.68 -67.43 REMARK 500 ALA A 100 146.94 -176.75 REMARK 500 LYS A 181 45.40 -143.85 REMARK 500 ASP A 227 146.92 -178.86 REMARK 500 ASN A 228 -136.35 61.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2020 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH A2202 DISTANCE = 6.35 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1269 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 164 OD1 REMARK 620 2 ASP A 165 OD2 82.7 REMARK 620 3 ASN A 225 OD1 114.4 75.1 REMARK 620 4 ASP A 227 O 166.2 110.5 74.6 REMARK 620 5 ASP A 229 O 80.5 136.8 76.3 92.0 REMARK 620 6 GAL B 2 O3 89.8 68.7 133.0 91.0 150.0 REMARK 620 7 GAL B 2 O4 76.1 129.6 155.2 91.7 83.8 66.2 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4COU RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF EPITHELIAL ADHESIN 6 A DOMAIN ( EPA6A) FROM REMARK 900 CANDIDA GLABRATA IN COMPLEX WITH LACTOSE REMARK 900 RELATED ID: 4COV RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF EPITHELIAL ADHESIN 6 A DOMAIN ( EPA6A) FROM REMARK 900 CANDIDA GLABRATA IN COMPLEX WITH GALA1- 3GAL REMARK 900 RELATED ID: 4COY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF EPITHELIAL ADHESIN 6 A DOMAIN ( EPA6A) FROM REMARK 900 CANDIDA GLABRATA IN COMPLEX WITH GALB1- 4GLCNAC REMARK 900 RELATED ID: 4COZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF EPITHELIAL ADHESIN 6 A DOMAIN ( EPA6A) FROM REMARK 900 CANDIDA GLABRATA IN COMPLEX WITH GALB1- 3GLCNAC REMARK 900 RELATED ID: 4CP0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF EPITHELIAL ADHESIN 9 A DOMAIN ( EPA9A) FROM REMARK 900 CANDIDA GLABRATA IN COMPLEX WITH LACTOSE REMARK 900 RELATED ID: 4CP1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF EPITHELIAL ADHESIN 9 A DOMAIN ( EPA9A) FROM REMARK 900 CANDIDA GLABRATA IN COMPLEX WITH GALB1- 3GLCNAC REMARK 900 RELATED ID: 4CP2 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF EPITHELIAL ADHESIN 9 A DOMAIN ( EPA9A) FROM REMARK 900 CANDIDA GLABRATA IN COMPLEX WITH GALB1- 4GLCNAC DBREF 4COW A 26 271 UNP Q6FX55 Q6FX55_CANGA 26 271 SEQADV 4COW MET A 5 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW GLY A 6 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW SER A 7 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW SER A 8 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW HIS A 9 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW HIS A 10 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW HIS A 11 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW HIS A 12 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW HIS A 13 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW HIS A 14 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW SER A 15 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW SER A 16 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW GLY A 17 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW LEU A 18 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW VAL A 19 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW PRO A 20 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW ARG A 21 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW GLY A 22 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW SER A 23 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW HIS A 24 UNP Q6FX55 EXPRESSION TAG SEQADV 4COW MET A 25 UNP Q6FX55 EXPRESSION TAG SEQRES 1 A 267 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 267 LEU VAL PRO ARG GLY SER HIS MET LYS ASP ASP TYR SER SEQRES 3 A 267 SER SER LEU SER ASN ASN ASN LEU GLY TRP THR ASP PRO SEQRES 4 A 267 THR GLU PHE PRO LEU GLY CYS SER PRO ASN VAL THR THR SEQRES 5 A 267 PRO LYS ASN GLY LEU SER MET GLU LEU TYR SER TYR ASP SEQRES 6 A 267 TYR LEU LYS SER GLY SER ASN PRO CYS TRP ASP ALA ALA SEQRES 7 A 267 TYR LEU ASP PRO ASN TYR PRO ARG THR GLY TYR LYS SER SEQRES 8 A 267 HIS ARG LEU LEU ALA LYS VAL GLU ASN VAL ALA GLY ASN SEQRES 9 A 267 ILE ASN PHE TYR TYR HIS ALA PRO MET GLY CYS THR SER SEQRES 10 A 267 LEU PHE ASP THR LEU PRO GLN ALA TYR ASN TYR ARG THR SEQRES 11 A 267 PRO LEU THR MET THR ASN PHE THR MET LEU LEU TYR GLY SEQRES 12 A 267 TYR PHE LYS PRO LYS VAL THR GLY TYR HIS THR PHE THR SEQRES 13 A 267 ILE SER ALA ASP ASP LEU LEU PHE VAL ASN PHE GLY ALA SEQRES 14 A 267 GLY ASN ALA PHE ASP CYS CYS LYS ARG GLU SER SER ALA SEQRES 15 A 267 ASP ASP PHE GLY ASN TYR GLN ALA TYR ALA VAL TRP GLY SEQRES 16 A 267 SER GLN THR ALA LYS ASP ASP LEU THR VAL HIS LEU ASP SEQRES 17 A 267 ALA GLY LEU TYR TYR PRO ILE ARG ILE PHE PHE ASN ASN SEQRES 18 A 267 ARG ASP ASN ASP GLY ALA LEU SER LEU THR LEU LYS THR SEQRES 19 A 267 GLU SER ASP PRO ASN PRO VAL ILE ASP PHE SER ASP TYR SEQRES 20 A 267 PHE TYR SER PHE ASP ASP THR LYS ASP GLY CYS PRO GLY SEQRES 21 A 267 LEU VAL SER TYR ASP THR SER HET NGA B 1 15 HET GAL B 2 11 HET CA A1269 1 HET ACT A1272 4 HET GOL A1273 6 HET GOL A1274 6 HETNAM NGA 2-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM CA CALCIUM ION HETNAM ACT ACETATE ION HETNAM GOL GLYCEROL HETSYN NGA N-ACETYL-BETA-D-GALACTOSAMINE; 2-ACETAMIDO-2-DEOXY- HETSYN 2 NGA BETA-D-GALACTOSE; 2-ACETAMIDO-2-DEOXY-D-GALACTOSE; 2- HETSYN 3 NGA ACETAMIDO-2-DEOXY-GALACTOSE; N-ACETYL-D-GALACTOSAMINE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NGA C8 H15 N O6 FORMUL 2 GAL C6 H12 O6 FORMUL 3 CA CA 2+ FORMUL 4 ACT C2 H3 O2 1- FORMUL 5 GOL 2(C3 H8 O3) FORMUL 7 HOH *200(H2 O) HELIX 1 1 ALA A 81 ASP A 85 5 5 HELIX 2 2 THR A 91 HIS A 96 5 6 HELIX 3 3 PRO A 127 ASN A 131 5 5 HELIX 4 4 ARG A 182 ALA A 186 5 5 SHEET 1 AA 6 LYS A 58 ASN A 59 0 SHEET 2 AA 6 PHE A 252 SER A 254 -1 O SER A 254 N LYS A 58 SHEET 3 AA 6 PHE A 141 PHE A 149 1 O TYR A 148 N TYR A 253 SHEET 4 AA 6 TYR A 217 ASN A 225 -1 O TYR A 217 N PHE A 149 SHEET 5 AA 6 LEU A 166 PHE A 171 -1 O LEU A 166 N ASN A 224 SHEET 6 AA 6 ALA A 194 VAL A 197 -1 O ALA A 194 N VAL A 169 SHEET 1 AB 5 LYS A 58 ASN A 59 0 SHEET 2 AB 5 PHE A 252 SER A 254 -1 O SER A 254 N LYS A 58 SHEET 3 AB 5 PHE A 141 PHE A 149 1 O TYR A 148 N TYR A 253 SHEET 4 AB 5 LEU A 61 SER A 67 -1 O SER A 62 N TYR A 146 SHEET 5 AB 5 LEU A 98 VAL A 105 -1 N LEU A 99 O LEU A 65 SHEET 1 AC 4 PHE A 111 TYR A 113 0 SHEET 2 AC 4 GLY A 230 THR A 238 -1 O GLY A 230 N TYR A 113 SHEET 3 AC 4 GLY A 155 ASP A 164 -1 O THR A 158 N LYS A 237 SHEET 4 AC 4 LYS A 204 LEU A 211 -1 O ASP A 205 N ILE A 161 SHEET 1 AD 2 PHE A 123 ASP A 124 0 SHEET 2 AD 2 LEU A 136 THR A 137 -1 O LEU A 136 N ASP A 124 SSBOND 1 CYS A 50 CYS A 179 1555 1555 2.03 SSBOND 2 CYS A 78 CYS A 119 1555 1555 2.03 SSBOND 3 CYS A 180 CYS A 262 1555 1555 2.02 LINK O3 NGA B 1 C1 GAL B 2 1555 1555 1.43 LINK OD1 ASP A 164 CA CA A1269 1555 1555 2.34 LINK OD2 ASP A 165 CA CA A1269 1555 1555 2.43 LINK OD1 ASN A 225 CA CA A1269 1555 1555 2.36 LINK O ASP A 227 CA CA A1269 1555 1555 2.30 LINK O ASP A 229 CA CA A1269 1555 1555 2.36 LINK CA CA A1269 O3 GAL B 2 1555 1555 2.33 LINK CA CA A1269 O4 GAL B 2 1555 1555 2.34 CISPEP 1 ASN A 76 PRO A 77 0 -3.78 CISPEP 2 ASP A 164 ASP A 165 0 16.05 CRYST1 41.350 61.100 106.610 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024184 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016367 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009380 0.00000