data_4CP3 # _entry.id 4CP3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4CP3 pdb_00004cp3 10.2210/pdb4cp3/pdb PDBE EBI-59651 ? ? WWPDB D_1290059651 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4CP3 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-01-31 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Evans, S.E.' 1 'Fairall, L.' 2 'Goult, B.T.' 3 'Jamieson, A.G.' 4 'Ferrigno, P.K.' 5 'Ford, R.' 6 'Wagner, S.D.' 7 'Schwabe, J.W.R.' 8 # _citation.id primary _citation.title 'The Ansamycin Antibiotic, Rifamycin Sv, Inhibits Bcl6 Transcriptional Repression and Forms a Complex with the Bcl6-Btb/Poz Domain.' _citation.journal_abbrev 'Plos One' _citation.journal_volume 9 _citation.page_first 90889 _citation.page_last ? _citation.year 2014 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24595451 _citation.pdbx_database_id_DOI 10.1371/JOURNAL.PONE.0090889 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Evans, S.E.' 1 ? primary 'Goult, B.T.' 2 ? primary 'Fairall, L.' 3 ? primary 'Jamieson, A.G.' 4 ? primary 'Ko Ferrigno, P.' 5 ? primary 'Ford, R.' 6 ? primary 'Schwabe, J.W.R.' 7 ? primary 'Wagner, S.D.' 8 ? # _cell.entry_id 4CP3 _cell.length_a 35.172 _cell.length_b 54.828 _cell.length_c 58.159 _cell.angle_alpha 90.00 _cell.angle_beta 95.21 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CP3 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'B-CELL LYMPHOMA 6 PROTEIN' 14228.543 2 ? YES 'BTB DOMAIN, RESIDUES 9-128' ? 2 non-polymer syn RIFABUTIN 847.005 1 ? ? ? ? 3 water nat water 18.015 23 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'BCL-6, B-CELL LYMPHOMA 5 PROTEIN, BCL-5, PROTEIN LAZ-3, ZINC FINGER AND BTB DOMAIN-CONTAINING PROTEIN 27, ZINC FINGER PROTEIN 51' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GASQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFN ILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS ; _entity_poly.pdbx_seq_one_letter_code_can ;GASQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFN ILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 SER n 1 4 GLN n 1 5 ILE n 1 6 GLN n 1 7 PHE n 1 8 THR n 1 9 ARG n 1 10 HIS n 1 11 ALA n 1 12 SER n 1 13 ASP n 1 14 VAL n 1 15 LEU n 1 16 LEU n 1 17 ASN n 1 18 LEU n 1 19 ASN n 1 20 ARG n 1 21 LEU n 1 22 ARG n 1 23 SER n 1 24 ARG n 1 25 ASP n 1 26 ILE n 1 27 LEU n 1 28 THR n 1 29 ASP n 1 30 VAL n 1 31 VAL n 1 32 ILE n 1 33 VAL n 1 34 VAL n 1 35 SER n 1 36 ARG n 1 37 GLU n 1 38 GLN n 1 39 PHE n 1 40 ARG n 1 41 ALA n 1 42 HIS n 1 43 LYS n 1 44 THR n 1 45 VAL n 1 46 LEU n 1 47 MET n 1 48 ALA n 1 49 CYS n 1 50 SER n 1 51 GLY n 1 52 LEU n 1 53 PHE n 1 54 TYR n 1 55 SER n 1 56 ILE n 1 57 PHE n 1 58 THR n 1 59 ASP n 1 60 GLN n 1 61 LEU n 1 62 LYS n 1 63 ARG n 1 64 ASN n 1 65 LEU n 1 66 SER n 1 67 VAL n 1 68 ILE n 1 69 ASN n 1 70 LEU n 1 71 ASP n 1 72 PRO n 1 73 GLU n 1 74 ILE n 1 75 ASN n 1 76 PRO n 1 77 GLU n 1 78 GLY n 1 79 PHE n 1 80 ASN n 1 81 ILE n 1 82 LEU n 1 83 LEU n 1 84 ASP n 1 85 PHE n 1 86 MET n 1 87 TYR n 1 88 THR n 1 89 SER n 1 90 ARG n 1 91 LEU n 1 92 ASN n 1 93 LEU n 1 94 ARG n 1 95 GLU n 1 96 GLY n 1 97 ASN n 1 98 ILE n 1 99 MET n 1 100 ALA n 1 101 VAL n 1 102 MET n 1 103 ALA n 1 104 THR n 1 105 ALA n 1 106 MET n 1 107 TYR n 1 108 LEU n 1 109 GLN n 1 110 MET n 1 111 GLU n 1 112 HIS n 1 113 VAL n 1 114 VAL n 1 115 ASP n 1 116 THR n 1 117 CYS n 1 118 ARG n 1 119 LYS n 1 120 PHE n 1 121 ILE n 1 122 LYS n 1 123 ALA n 1 124 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ROSETTA _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET30 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BCL6_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P41182 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4CP3 A 5 ? 124 ? P41182 9 ? 128 ? 9 128 2 1 4CP3 B 5 ? 124 ? P41182 9 ? 128 ? 9 128 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4CP3 GLY A 1 ? UNP P41182 ? ? 'expression tag' 5 1 1 4CP3 ALA A 2 ? UNP P41182 ? ? 'expression tag' 6 2 1 4CP3 SER A 3 ? UNP P41182 ? ? 'expression tag' 7 3 1 4CP3 GLN A 4 ? UNP P41182 ? ? 'expression tag' 8 4 1 4CP3 ARG A 63 ? UNP P41182 CYS 67 'engineered mutation' 67 5 1 4CP3 ASN A 80 ? UNP P41182 CYS 84 'engineered mutation' 84 6 2 4CP3 GLY B 1 ? UNP P41182 ? ? 'expression tag' 5 7 2 4CP3 ALA B 2 ? UNP P41182 ? ? 'expression tag' 6 8 2 4CP3 SER B 3 ? UNP P41182 ? ? 'expression tag' 7 9 2 4CP3 GLN B 4 ? UNP P41182 ? ? 'expression tag' 8 10 2 4CP3 ARG B 63 ? UNP P41182 CYS 67 'engineered mutation' 67 11 2 4CP3 ASN B 80 ? UNP P41182 CYS 84 'engineered mutation' 84 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RBT non-polymer . RIFABUTIN ;(9S,12E,14S,15R,16S,17R,18R,19R,20S,21S,22E,24Z)-6-16,18,20- TETRAHYDROXY-1'-ISOBUTYL-14-METHOXY-7,9,15,17,19,21,25- HEPTAMETHYLSPIRO(9,4-(EPOXYPENTADECA(1,11,13)TRIENIMINO)-2H- FURO(2',3':7,8)NAPHTH(1,2-D)IMIDAZOLE-2,4'-PIPERIDINE)- 5,10,26(3H,9H)-TRIONE,16-ACETATE; ANSAMYCIN ; 'C46 H62 N4 O11' 847.005 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4CP3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.99 _exptl_crystal.density_percent_sol 38.17 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '20% PEG 6000, 100MM SODIUM CITRATE, PH 5.' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2012-08-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.96861 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I24' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I24 _diffrn_source.pdbx_wavelength 0.96861 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4CP3 _reflns.observed_criterion_sigma_I 4.1 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 39.82 _reflns.d_resolution_high 2.30 _reflns.number_obs 9168 _reflns.number_all ? _reflns.percent_possible_obs 97.0 _reflns.pdbx_Rmerge_I_obs 0.108 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 9.80 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.0 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_all 97.0 _reflns_shell.Rmerge_I_obs 0.518 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.10 _reflns_shell.pdbx_redundancy 2.9 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4CP3 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 9168 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 57.92 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 97.13 _refine.ls_R_factor_obs 0.20193 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19877 _refine.ls_R_factor_R_free 0.26875 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 466 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.938 _refine.correlation_coeff_Fo_to_Fc_free 0.878 _refine.B_iso_mean 29.366 _refine.aniso_B[1][1] 1.85 _refine.aniso_B[2][2] -0.11 _refine.aniso_B[3][3] -1.71 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.01 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES REFINED INDIVIDUALLY' _refine.pdbx_starting_model 'PDB ENTRY 1R2B' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.688 _refine.pdbx_overall_ESU_R_Free 0.300 _refine.overall_SU_ML 0.237 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 9.861 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1969 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 61 _refine_hist.number_atoms_solvent 23 _refine_hist.number_atoms_total 2053 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 57.92 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.019 ? 2063 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 2046 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.875 1.995 ? 2794 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.863 3.000 ? 4659 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.623 5.000 ? 242 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.034 23.125 ? 96 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.089 15.000 ? 375 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.575 15.000 ? 20 'X-RAY DIFFRACTION' ? r_chiral_restr 0.171 0.200 ? 332 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 2279 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 499 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.848 2.609 ? 974 'X-RAY DIFFRACTION' ? r_mcbond_other 1.840 2.607 ? 973 'X-RAY DIFFRACTION' ? r_mcangle_it 3.032 3.900 ? 1214 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.594 3.193 ? 1089 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.360 _refine_ls_shell.number_reflns_R_work 664 _refine_ls_shell.R_factor_R_work 0.229 _refine_ls_shell.percent_reflns_obs 96.86 _refine_ls_shell.R_factor_R_free 0.281 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 45 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 4CP3 _struct.title 'The structure of BCL6 BTB (POZ) domain in complex with the ansamycin antibiotic rifabutin.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4CP3 _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'IMMUNE SYSTEM, BTB/POZ, TRANSCRIPTIONAL REPRESSOR, RIFAMYCIN, ANTIBIOTIC, SMRT, INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 9 ? ARG A 24 ? ARG A 13 ARG A 28 1 ? 16 HELX_P HELX_P2 2 HIS A 42 ? SER A 50 ? HIS A 46 SER A 54 1 ? 9 HELX_P HELX_P3 3 SER A 50 ? ASP A 59 ? SER A 54 ASP A 63 1 ? 10 HELX_P HELX_P4 4 LEU A 61 ? LEU A 65 ? LEU A 65 LEU A 69 5 ? 5 HELX_P HELX_P5 5 ASN A 75 ? SER A 89 ? ASN A 79 SER A 93 1 ? 15 HELX_P HELX_P6 6 ASN A 97 ? GLN A 109 ? ASN A 101 GLN A 113 1 ? 13 HELX_P HELX_P7 7 MET A 110 ? ILE A 121 ? MET A 114 ILE A 125 1 ? 12 HELX_P HELX_P8 8 THR B 8 ? ARG B 24 ? THR B 12 ARG B 28 1 ? 17 HELX_P HELX_P9 9 HIS B 42 ? ALA B 48 ? HIS B 46 ALA B 52 1 ? 7 HELX_P HELX_P10 10 SER B 50 ? THR B 58 ? SER B 54 THR B 62 1 ? 9 HELX_P HELX_P11 11 ASN B 75 ? SER B 89 ? ASN B 79 SER B 93 1 ? 15 HELX_P HELX_P12 12 ASN B 97 ? LEU B 108 ? ASN B 101 LEU B 112 1 ? 12 HELX_P HELX_P13 13 MET B 110 ? SER B 124 ? MET B 114 SER B 128 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 3 ? BA ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? parallel BA 1 2 ? anti-parallel BA 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 SER A 3 ? GLN A 6 ? SER A 7 GLN A 10 AA 2 ARG B 90 ? LEU B 93 ? ARG B 94 LEU B 97 AB 1 GLU A 37 ? ALA A 41 ? GLU A 41 ALA A 45 AB 2 VAL A 30 ? VAL A 34 ? VAL A 34 VAL A 38 AB 3 VAL A 67 ? ASN A 69 ? VAL A 71 ASN A 73 BA 1 GLU B 37 ? ALA B 41 ? GLU B 41 ALA B 45 BA 2 VAL B 30 ? VAL B 34 ? VAL B 34 VAL B 38 BA 3 VAL B 67 ? ASN B 69 ? VAL B 71 ASN B 73 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ILE A 5 ? N ILE A 9 O LEU B 91 ? O LEU B 95 AB 1 2 N ALA A 41 ? N ALA A 45 O VAL A 30 ? O VAL A 34 AB 2 3 N VAL A 33 ? N VAL A 37 O ILE A 68 ? O ILE A 72 BA 1 2 N ALA B 41 ? N ALA B 45 O VAL B 30 ? O VAL B 34 BA 2 3 N VAL B 33 ? N VAL B 37 O ILE B 68 ? O ILE B 72 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id RBT _struct_site.pdbx_auth_seq_id 1129 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 7 _struct_site.details 'BINDING SITE FOR RESIDUE RBT B 1129' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 ASN A 17 ? ASN A 21 . ? 1_555 ? 2 AC1 7 ARG A 20 ? ARG A 24 . ? 1_555 ? 3 AC1 7 MET B 47 ? MET B 51 . ? 1_555 ? 4 AC1 7 SER B 50 ? SER B 54 . ? 1_555 ? 5 AC1 7 GLY B 51 ? GLY B 55 . ? 1_555 ? 6 AC1 7 TYR B 54 ? TYR B 58 . ? 1_555 ? 7 AC1 7 HOH E . ? HOH B 2005 . ? 1_555 ? # _database_PDB_matrix.entry_id 4CP3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4CP3 _atom_sites.fract_transf_matrix[1][1] 0.028432 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002592 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018239 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017266 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 5 ? ? ? A . n A 1 2 ALA 2 6 6 ALA ALA A . n A 1 3 SER 3 7 7 SER SER A . n A 1 4 GLN 4 8 8 GLN GLN A . n A 1 5 ILE 5 9 9 ILE ILE A . n A 1 6 GLN 6 10 10 GLN GLN A . n A 1 7 PHE 7 11 11 PHE PHE A . n A 1 8 THR 8 12 12 THR THR A . n A 1 9 ARG 9 13 13 ARG ARG A . n A 1 10 HIS 10 14 14 HIS HIS A . n A 1 11 ALA 11 15 15 ALA ALA A . n A 1 12 SER 12 16 16 SER SER A . n A 1 13 ASP 13 17 17 ASP ASP A . n A 1 14 VAL 14 18 18 VAL VAL A . n A 1 15 LEU 15 19 19 LEU LEU A . n A 1 16 LEU 16 20 20 LEU LEU A . n A 1 17 ASN 17 21 21 ASN ASN A . n A 1 18 LEU 18 22 22 LEU LEU A . n A 1 19 ASN 19 23 23 ASN ASN A . n A 1 20 ARG 20 24 24 ARG ARG A . n A 1 21 LEU 21 25 25 LEU LEU A . n A 1 22 ARG 22 26 26 ARG ARG A . n A 1 23 SER 23 27 27 SER SER A . n A 1 24 ARG 24 28 28 ARG ARG A . n A 1 25 ASP 25 29 29 ASP ASP A . n A 1 26 ILE 26 30 30 ILE ILE A . n A 1 27 LEU 27 31 31 LEU LEU A . n A 1 28 THR 28 32 32 THR THR A . n A 1 29 ASP 29 33 33 ASP ASP A . n A 1 30 VAL 30 34 34 VAL VAL A . n A 1 31 VAL 31 35 35 VAL VAL A . n A 1 32 ILE 32 36 36 ILE ILE A . n A 1 33 VAL 33 37 37 VAL VAL A . n A 1 34 VAL 34 38 38 VAL VAL A . n A 1 35 SER 35 39 39 SER SER A . n A 1 36 ARG 36 40 40 ARG ARG A . n A 1 37 GLU 37 41 41 GLU GLU A . n A 1 38 GLN 38 42 42 GLN GLN A . n A 1 39 PHE 39 43 43 PHE PHE A . n A 1 40 ARG 40 44 44 ARG ARG A . n A 1 41 ALA 41 45 45 ALA ALA A . n A 1 42 HIS 42 46 46 HIS HIS A . n A 1 43 LYS 43 47 47 LYS LYS A . n A 1 44 THR 44 48 48 THR THR A . n A 1 45 VAL 45 49 49 VAL VAL A . n A 1 46 LEU 46 50 50 LEU LEU A . n A 1 47 MET 47 51 51 MET MET A . n A 1 48 ALA 48 52 52 ALA ALA A . n A 1 49 CYS 49 53 53 CYS CYS A . n A 1 50 SER 50 54 54 SER SER A . n A 1 51 GLY 51 55 55 GLY GLY A . n A 1 52 LEU 52 56 56 LEU LEU A . n A 1 53 PHE 53 57 57 PHE PHE A . n A 1 54 TYR 54 58 58 TYR TYR A . n A 1 55 SER 55 59 59 SER SER A . n A 1 56 ILE 56 60 60 ILE ILE A . n A 1 57 PHE 57 61 61 PHE PHE A . n A 1 58 THR 58 62 62 THR THR A . n A 1 59 ASP 59 63 63 ASP ASP A . n A 1 60 GLN 60 64 64 GLN GLN A . n A 1 61 LEU 61 65 65 LEU LEU A . n A 1 62 LYS 62 66 66 LYS LYS A . n A 1 63 ARG 63 67 67 ARG ARG A . n A 1 64 ASN 64 68 68 ASN ASN A . n A 1 65 LEU 65 69 69 LEU LEU A . n A 1 66 SER 66 70 70 SER SER A . n A 1 67 VAL 67 71 71 VAL VAL A . n A 1 68 ILE 68 72 72 ILE ILE A . n A 1 69 ASN 69 73 73 ASN ASN A . n A 1 70 LEU 70 74 74 LEU LEU A . n A 1 71 ASP 71 75 75 ASP ASP A . n A 1 72 PRO 72 76 76 PRO PRO A . n A 1 73 GLU 73 77 77 GLU GLU A . n A 1 74 ILE 74 78 78 ILE ILE A . n A 1 75 ASN 75 79 79 ASN ASN A . n A 1 76 PRO 76 80 80 PRO PRO A . n A 1 77 GLU 77 81 81 GLU GLU A . n A 1 78 GLY 78 82 82 GLY GLY A . n A 1 79 PHE 79 83 83 PHE PHE A . n A 1 80 ASN 80 84 84 ASN ASN A . n A 1 81 ILE 81 85 85 ILE ILE A . n A 1 82 LEU 82 86 86 LEU LEU A . n A 1 83 LEU 83 87 87 LEU LEU A . n A 1 84 ASP 84 88 88 ASP ASP A . n A 1 85 PHE 85 89 89 PHE PHE A . n A 1 86 MET 86 90 90 MET MET A . n A 1 87 TYR 87 91 91 TYR TYR A . n A 1 88 THR 88 92 92 THR THR A . n A 1 89 SER 89 93 93 SER SER A . n A 1 90 ARG 90 94 94 ARG ARG A . n A 1 91 LEU 91 95 95 LEU LEU A . n A 1 92 ASN 92 96 96 ASN ASN A . n A 1 93 LEU 93 97 97 LEU LEU A . n A 1 94 ARG 94 98 98 ARG ARG A . n A 1 95 GLU 95 99 99 GLU GLU A . n A 1 96 GLY 96 100 100 GLY GLY A . n A 1 97 ASN 97 101 101 ASN ASN A . n A 1 98 ILE 98 102 102 ILE ILE A . n A 1 99 MET 99 103 103 MET MET A . n A 1 100 ALA 100 104 104 ALA ALA A . n A 1 101 VAL 101 105 105 VAL VAL A . n A 1 102 MET 102 106 106 MET MET A . n A 1 103 ALA 103 107 107 ALA ALA A . n A 1 104 THR 104 108 108 THR THR A . n A 1 105 ALA 105 109 109 ALA ALA A . n A 1 106 MET 106 110 110 MET MET A . n A 1 107 TYR 107 111 111 TYR TYR A . n A 1 108 LEU 108 112 112 LEU LEU A . n A 1 109 GLN 109 113 113 GLN GLN A . n A 1 110 MET 110 114 114 MET MET A . n A 1 111 GLU 111 115 115 GLU GLU A . n A 1 112 HIS 112 116 116 HIS HIS A . n A 1 113 VAL 113 117 117 VAL VAL A . n A 1 114 VAL 114 118 118 VAL VAL A . n A 1 115 ASP 115 119 119 ASP ASP A . n A 1 116 THR 116 120 120 THR THR A . n A 1 117 CYS 117 121 121 CYS CYS A . n A 1 118 ARG 118 122 122 ARG ARG A . n A 1 119 LYS 119 123 123 LYS LYS A . n A 1 120 PHE 120 124 124 PHE PHE A . n A 1 121 ILE 121 125 125 ILE ILE A . n A 1 122 LYS 122 126 126 LYS LYS A . n A 1 123 ALA 123 127 127 ALA ALA A . n A 1 124 SER 124 128 ? ? ? A . n B 1 1 GLY 1 5 ? ? ? B . n B 1 2 ALA 2 6 ? ? ? B . n B 1 3 SER 3 7 7 SER SER B . n B 1 4 GLN 4 8 8 GLN GLN B . n B 1 5 ILE 5 9 9 ILE ILE B . n B 1 6 GLN 6 10 10 GLN GLN B . n B 1 7 PHE 7 11 11 PHE PHE B . n B 1 8 THR 8 12 12 THR THR B . n B 1 9 ARG 9 13 13 ARG ARG B . n B 1 10 HIS 10 14 14 HIS HIS B . n B 1 11 ALA 11 15 15 ALA ALA B . n B 1 12 SER 12 16 16 SER SER B . n B 1 13 ASP 13 17 17 ASP ASP B . n B 1 14 VAL 14 18 18 VAL VAL B . n B 1 15 LEU 15 19 19 LEU LEU B . n B 1 16 LEU 16 20 20 LEU LEU B . n B 1 17 ASN 17 21 21 ASN ASN B . n B 1 18 LEU 18 22 22 LEU LEU B . n B 1 19 ASN 19 23 23 ASN ASN B . n B 1 20 ARG 20 24 24 ARG ARG B . n B 1 21 LEU 21 25 25 LEU LEU B . n B 1 22 ARG 22 26 26 ARG ARG B . n B 1 23 SER 23 27 27 SER SER B . n B 1 24 ARG 24 28 28 ARG ARG B . n B 1 25 ASP 25 29 29 ASP ASP B . n B 1 26 ILE 26 30 30 ILE ILE B . n B 1 27 LEU 27 31 31 LEU LEU B . n B 1 28 THR 28 32 32 THR THR B . n B 1 29 ASP 29 33 33 ASP ASP B . n B 1 30 VAL 30 34 34 VAL VAL B . n B 1 31 VAL 31 35 35 VAL VAL B . n B 1 32 ILE 32 36 36 ILE ILE B . n B 1 33 VAL 33 37 37 VAL VAL B . n B 1 34 VAL 34 38 38 VAL VAL B . n B 1 35 SER 35 39 39 SER SER B . n B 1 36 ARG 36 40 40 ARG ARG B . n B 1 37 GLU 37 41 41 GLU GLU B . n B 1 38 GLN 38 42 42 GLN GLN B . n B 1 39 PHE 39 43 43 PHE PHE B . n B 1 40 ARG 40 44 44 ARG ARG B . n B 1 41 ALA 41 45 45 ALA ALA B . n B 1 42 HIS 42 46 46 HIS HIS B . n B 1 43 LYS 43 47 47 LYS LYS B . n B 1 44 THR 44 48 48 THR THR B . n B 1 45 VAL 45 49 49 VAL VAL B . n B 1 46 LEU 46 50 50 LEU LEU B . n B 1 47 MET 47 51 51 MET MET B . n B 1 48 ALA 48 52 52 ALA ALA B . n B 1 49 CYS 49 53 53 CYS CYS B . n B 1 50 SER 50 54 54 SER SER B . n B 1 51 GLY 51 55 55 GLY GLY B . n B 1 52 LEU 52 56 56 LEU LEU B . n B 1 53 PHE 53 57 57 PHE PHE B . n B 1 54 TYR 54 58 58 TYR TYR B . n B 1 55 SER 55 59 59 SER SER B . n B 1 56 ILE 56 60 60 ILE ILE B . n B 1 57 PHE 57 61 61 PHE PHE B . n B 1 58 THR 58 62 62 THR THR B . n B 1 59 ASP 59 63 63 ASP ASP B . n B 1 60 GLN 60 64 64 GLN GLN B . n B 1 61 LEU 61 65 65 LEU LEU B . n B 1 62 LYS 62 66 66 LYS LYS B . n B 1 63 ARG 63 67 67 ARG ARG B . n B 1 64 ASN 64 68 68 ASN ASN B . n B 1 65 LEU 65 69 69 LEU LEU B . n B 1 66 SER 66 70 70 SER SER B . n B 1 67 VAL 67 71 71 VAL VAL B . n B 1 68 ILE 68 72 72 ILE ILE B . n B 1 69 ASN 69 73 73 ASN ASN B . n B 1 70 LEU 70 74 74 LEU LEU B . n B 1 71 ASP 71 75 75 ASP ASP B . n B 1 72 PRO 72 76 76 PRO PRO B . n B 1 73 GLU 73 77 77 GLU GLU B . n B 1 74 ILE 74 78 78 ILE ILE B . n B 1 75 ASN 75 79 79 ASN ASN B . n B 1 76 PRO 76 80 80 PRO PRO B . n B 1 77 GLU 77 81 81 GLU GLU B . n B 1 78 GLY 78 82 82 GLY GLY B . n B 1 79 PHE 79 83 83 PHE PHE B . n B 1 80 ASN 80 84 84 ASN ASN B . n B 1 81 ILE 81 85 85 ILE ILE B . n B 1 82 LEU 82 86 86 LEU LEU B . n B 1 83 LEU 83 87 87 LEU LEU B . n B 1 84 ASP 84 88 88 ASP ASP B . n B 1 85 PHE 85 89 89 PHE PHE B . n B 1 86 MET 86 90 90 MET MET B . n B 1 87 TYR 87 91 91 TYR TYR B . n B 1 88 THR 88 92 92 THR THR B . n B 1 89 SER 89 93 93 SER SER B . n B 1 90 ARG 90 94 94 ARG ARG B . n B 1 91 LEU 91 95 95 LEU LEU B . n B 1 92 ASN 92 96 96 ASN ASN B . n B 1 93 LEU 93 97 97 LEU LEU B . n B 1 94 ARG 94 98 98 ARG ARG B . n B 1 95 GLU 95 99 99 GLU GLU B . n B 1 96 GLY 96 100 100 GLY GLY B . n B 1 97 ASN 97 101 101 ASN ASN B . n B 1 98 ILE 98 102 102 ILE ILE B . n B 1 99 MET 99 103 103 MET MET B . n B 1 100 ALA 100 104 104 ALA ALA B . n B 1 101 VAL 101 105 105 VAL VAL B . n B 1 102 MET 102 106 106 MET MET B . n B 1 103 ALA 103 107 107 ALA ALA B . n B 1 104 THR 104 108 108 THR THR B . n B 1 105 ALA 105 109 109 ALA ALA B . n B 1 106 MET 106 110 110 MET MET B . n B 1 107 TYR 107 111 111 TYR TYR B . n B 1 108 LEU 108 112 112 LEU LEU B . n B 1 109 GLN 109 113 113 GLN GLN B . n B 1 110 MET 110 114 114 MET MET B . n B 1 111 GLU 111 115 115 GLU GLU B . n B 1 112 HIS 112 116 116 HIS HIS B . n B 1 113 VAL 113 117 117 VAL VAL B . n B 1 114 VAL 114 118 118 VAL VAL B . n B 1 115 ASP 115 119 119 ASP ASP B . n B 1 116 THR 116 120 120 THR THR B . n B 1 117 CYS 117 121 121 CYS CYS B . n B 1 118 ARG 118 122 122 ARG ARG B . n B 1 119 LYS 119 123 123 LYS LYS B . n B 1 120 PHE 120 124 124 PHE PHE B . n B 1 121 ILE 121 125 125 ILE ILE B . n B 1 122 LYS 122 126 126 LYS LYS B . n B 1 123 ALA 123 127 127 ALA ALA B . n B 1 124 SER 124 128 128 SER SER B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 RBT 1 1129 1129 RBT RBT B . D 3 HOH 1 2001 2001 HOH HOH A . D 3 HOH 2 2002 2002 HOH HOH A . D 3 HOH 3 2003 2003 HOH HOH A . D 3 HOH 4 2004 2004 HOH HOH A . D 3 HOH 5 2005 2005 HOH HOH A . D 3 HOH 6 2006 2006 HOH HOH A . D 3 HOH 7 2007 2007 HOH HOH A . D 3 HOH 8 2008 2008 HOH HOH A . D 3 HOH 9 2009 2009 HOH HOH A . D 3 HOH 10 2010 2010 HOH HOH A . D 3 HOH 11 2011 2011 HOH HOH A . D 3 HOH 12 2012 2012 HOH HOH A . D 3 HOH 13 2013 2013 HOH HOH A . E 3 HOH 1 2001 2001 HOH HOH B . E 3 HOH 2 2002 2002 HOH HOH B . E 3 HOH 3 2003 2003 HOH HOH B . E 3 HOH 4 2004 2004 HOH HOH B . E 3 HOH 5 2005 2005 HOH HOH B . E 3 HOH 6 2006 2006 HOH HOH B . E 3 HOH 7 2007 2007 HOH HOH B . E 3 HOH 8 2008 2008 HOH HOH B . E 3 HOH 9 2009 2009 HOH HOH B . E 3 HOH 10 2010 2010 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4050 ? 1 MORE -31.7 ? 1 'SSA (A^2)' 13290 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-03-19 2 'Structure model' 1 1 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' Other 5 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_database_status 5 2 'Structure model' pdbx_initial_refinement_model 6 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_database_status.status_code_sf' 4 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.8.0049 ? 1 XDS 'data reduction' . ? 2 Aimless 'data scaling' . ? 3 PHASER phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 39 ? ? 54.91 -105.74 2 1 ASP A 63 ? ? -58.34 103.70 3 1 LYS A 126 ? ? 103.06 59.71 4 1 SER B 39 ? ? 54.62 -119.14 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 5 ? A GLY 1 2 1 Y 1 A SER 128 ? A SER 124 3 1 Y 1 B GLY 5 ? B GLY 1 4 1 Y 1 B ALA 6 ? B ALA 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 RBT C1 C N N 290 RBT C2 C N N 291 RBT C3 C N N 292 RBT C4 C N N 293 RBT C5 C Y N 294 RBT C6 C Y N 295 RBT C7 C Y N 296 RBT C8 C Y N 297 RBT C9 C Y N 298 RBT C10 C Y N 299 RBT C11 C N N 300 RBT C12 C N S 301 RBT C13 C N N 302 RBT C14 C N N 303 RBT C15 C N N 304 RBT C16 C N N 305 RBT C17 C N N 306 RBT C18 C N N 307 RBT C19 C N N 308 RBT C20 C N S 309 RBT C21 C N S 310 RBT C22 C N R 311 RBT C23 C N R 312 RBT C24 C N R 313 RBT C25 C N S 314 RBT C26 C N R 315 RBT C27 C N S 316 RBT C28 C N N 317 RBT C29 C N N 318 RBT C30 C N N 319 RBT C31 C N N 320 RBT C32 C N N 321 RBT C33 C N N 322 RBT C34 C N N 323 RBT C35 C N N 324 RBT C36 C N N 325 RBT C37 C N N 326 RBT C38 C N N 327 RBT C39 C N N 328 RBT C40 C N N 329 RBT C41 C N N 330 RBT C42 C N N 331 RBT C43 C N N 332 RBT C44 C N N 333 RBT C45 C N N 334 RBT C46 C N N 335 RBT N1 N N N 336 RBT N2 N N N 337 RBT N3 N N N 338 RBT N4 N N N 339 RBT O1 O N N 340 RBT O2 O N N 341 RBT O3 O N N 342 RBT O4 O N N 343 RBT O5 O N N 344 RBT O6 O N N 345 RBT O7 O N N 346 RBT O8 O N N 347 RBT O9 O N N 348 RBT O10 O N N 349 RBT O11 O N N 350 RBT H131 H N N 351 RBT H132 H N N 352 RBT H133 H N N 353 RBT H141 H N N 354 RBT H142 H N N 355 RBT H143 H N N 356 RBT H17 H N N 357 RBT H18 H N N 358 RBT H19 H N N 359 RBT H20 H N N 360 RBT H21 H N N 361 RBT H22 H N N 362 RBT H23 H N N 363 RBT H24 H N N 364 RBT H25 H N N 365 RBT H26 H N N 366 RBT H27 H N N 367 RBT H28 H N N 368 RBT H29 H N N 369 RBT H301 H N N 370 RBT H302 H N N 371 RBT H303 H N N 372 RBT H311 H N N 373 RBT H312 H N N 374 RBT H313 H N N 375 RBT H321 H N N 376 RBT H322 H N N 377 RBT H323 H N N 378 RBT H331 H N N 379 RBT H332 H N N 380 RBT H333 H N N 381 RBT H341 H N N 382 RBT H342 H N N 383 RBT H343 H N N 384 RBT H361 H N N 385 RBT H362 H N N 386 RBT H363 H N N 387 RBT H371 H N N 388 RBT H372 H N N 389 RBT H373 H N N 390 RBT H391 H N N 391 RBT H392 H N N 392 RBT H401 H N N 393 RBT H402 H N N 394 RBT H411 H N N 395 RBT H412 H N N 396 RBT H421 H N N 397 RBT H422 H N N 398 RBT H431 H N N 399 RBT H432 H N N 400 RBT H44 H N N 401 RBT H451 H N N 402 RBT H452 H N N 403 RBT H453 H N N 404 RBT H461 H N N 405 RBT H462 H N N 406 RBT H463 H N N 407 RBT HN1 H N N 408 RBT HN2 H N N 409 RBT HO2 H N N 410 RBT HO9 H N N 411 RBT H10 H N N 412 SER N N N N 413 SER CA C N S 414 SER C C N N 415 SER O O N N 416 SER CB C N N 417 SER OG O N N 418 SER OXT O N N 419 SER H H N N 420 SER H2 H N N 421 SER HA H N N 422 SER HB2 H N N 423 SER HB3 H N N 424 SER HG H N N 425 SER HXT H N N 426 THR N N N N 427 THR CA C N S 428 THR C C N N 429 THR O O N N 430 THR CB C N R 431 THR OG1 O N N 432 THR CG2 C N N 433 THR OXT O N N 434 THR H H N N 435 THR H2 H N N 436 THR HA H N N 437 THR HB H N N 438 THR HG1 H N N 439 THR HG21 H N N 440 THR HG22 H N N 441 THR HG23 H N N 442 THR HXT H N N 443 TYR N N N N 444 TYR CA C N S 445 TYR C C N N 446 TYR O O N N 447 TYR CB C N N 448 TYR CG C Y N 449 TYR CD1 C Y N 450 TYR CD2 C Y N 451 TYR CE1 C Y N 452 TYR CE2 C Y N 453 TYR CZ C Y N 454 TYR OH O N N 455 TYR OXT O N N 456 TYR H H N N 457 TYR H2 H N N 458 TYR HA H N N 459 TYR HB2 H N N 460 TYR HB3 H N N 461 TYR HD1 H N N 462 TYR HD2 H N N 463 TYR HE1 H N N 464 TYR HE2 H N N 465 TYR HH H N N 466 TYR HXT H N N 467 VAL N N N N 468 VAL CA C N S 469 VAL C C N N 470 VAL O O N N 471 VAL CB C N N 472 VAL CG1 C N N 473 VAL CG2 C N N 474 VAL OXT O N N 475 VAL H H N N 476 VAL H2 H N N 477 VAL HA H N N 478 VAL HB H N N 479 VAL HG11 H N N 480 VAL HG12 H N N 481 VAL HG13 H N N 482 VAL HG21 H N N 483 VAL HG22 H N N 484 VAL HG23 H N N 485 VAL HXT H N N 486 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 RBT C1 C2 sing N N 277 RBT C1 C9 sing N N 278 RBT C1 O1 doub N N 279 RBT C2 C3 doub N N 280 RBT C2 N1 sing N N 281 RBT C3 C4 sing N N 282 RBT C3 N2 sing N N 283 RBT C4 C10 sing N N 284 RBT C4 N3 doub N N 285 RBT C5 C6 doub Y N 286 RBT C5 C10 sing Y N 287 RBT C5 C11 sing N N 288 RBT C6 C7 sing Y N 289 RBT C6 O3 sing N N 290 RBT C7 C8 doub Y N 291 RBT C7 C14 sing N N 292 RBT C8 C9 sing Y N 293 RBT C8 O2 sing N N 294 RBT C9 C10 doub Y N 295 RBT C11 C12 sing N N 296 RBT C11 O4 doub N N 297 RBT C12 C13 sing N N 298 RBT C12 O3 sing N N 299 RBT C12 O5 sing N N 300 RBT C13 H131 sing N N 301 RBT C13 H132 sing N N 302 RBT C13 H133 sing N N 303 RBT C14 H141 sing N N 304 RBT C14 H142 sing N N 305 RBT C14 H143 sing N N 306 RBT C15 C16 sing N N 307 RBT C15 N1 sing N N 308 RBT C15 O11 doub N N 309 RBT C16 C17 doub N Z 310 RBT C16 C30 sing N N 311 RBT C17 C18 sing N N 312 RBT C17 H17 sing N N 313 RBT C18 C19 doub N E 314 RBT C18 H18 sing N N 315 RBT C19 C20 sing N N 316 RBT C19 H19 sing N N 317 RBT C20 C21 sing N N 318 RBT C20 C31 sing N N 319 RBT C20 H20 sing N N 320 RBT C21 C22 sing N N 321 RBT C21 O10 sing N N 322 RBT C21 H21 sing N N 323 RBT C22 C23 sing N N 324 RBT C22 C32 sing N N 325 RBT C22 H22 sing N N 326 RBT C23 C24 sing N N 327 RBT C23 O9 sing N N 328 RBT C23 H23 sing N N 329 RBT C24 C25 sing N N 330 RBT C24 C33 sing N N 331 RBT C24 H24 sing N N 332 RBT C25 C26 sing N N 333 RBT C25 O7 sing N N 334 RBT C25 H25 sing N N 335 RBT C26 C27 sing N N 336 RBT C26 C34 sing N N 337 RBT C26 H26 sing N N 338 RBT C27 C28 sing N N 339 RBT C27 O6 sing N N 340 RBT C27 H27 sing N N 341 RBT C28 C29 doub N E 342 RBT C28 H28 sing N N 343 RBT C29 O5 sing N N 344 RBT C29 H29 sing N N 345 RBT C30 H301 sing N N 346 RBT C30 H302 sing N N 347 RBT C30 H303 sing N N 348 RBT C31 H311 sing N N 349 RBT C31 H312 sing N N 350 RBT C31 H313 sing N N 351 RBT C32 H321 sing N N 352 RBT C32 H322 sing N N 353 RBT C32 H323 sing N N 354 RBT C33 H331 sing N N 355 RBT C33 H332 sing N N 356 RBT C33 H333 sing N N 357 RBT C34 H341 sing N N 358 RBT C34 H342 sing N N 359 RBT C34 H343 sing N N 360 RBT C35 C36 sing N N 361 RBT C35 O7 sing N N 362 RBT C35 O8 doub N N 363 RBT C36 H361 sing N N 364 RBT C36 H362 sing N N 365 RBT C36 H363 sing N N 366 RBT C37 O6 sing N N 367 RBT C37 H371 sing N N 368 RBT C37 H372 sing N N 369 RBT C37 H373 sing N N 370 RBT C38 C39 sing N N 371 RBT C38 C40 sing N N 372 RBT C38 N2 sing N N 373 RBT C38 N3 sing N N 374 RBT C39 C41 sing N N 375 RBT C39 H391 sing N N 376 RBT C39 H392 sing N N 377 RBT C40 C42 sing N N 378 RBT C40 H401 sing N N 379 RBT C40 H402 sing N N 380 RBT C41 N4 sing N N 381 RBT C41 H411 sing N N 382 RBT C41 H412 sing N N 383 RBT C42 N4 sing N N 384 RBT C42 H421 sing N N 385 RBT C42 H422 sing N N 386 RBT C43 C44 sing N N 387 RBT C43 N4 sing N N 388 RBT C43 H431 sing N N 389 RBT C43 H432 sing N N 390 RBT C44 C45 sing N N 391 RBT C44 C46 sing N N 392 RBT C44 H44 sing N N 393 RBT C45 H451 sing N N 394 RBT C45 H452 sing N N 395 RBT C45 H453 sing N N 396 RBT C46 H461 sing N N 397 RBT C46 H462 sing N N 398 RBT C46 H463 sing N N 399 RBT N1 HN1 sing N N 400 RBT N2 HN2 sing N N 401 RBT O2 HO2 sing N N 402 RBT O9 HO9 sing N N 403 RBT O10 H10 sing N N 404 SER N CA sing N N 405 SER N H sing N N 406 SER N H2 sing N N 407 SER CA C sing N N 408 SER CA CB sing N N 409 SER CA HA sing N N 410 SER C O doub N N 411 SER C OXT sing N N 412 SER CB OG sing N N 413 SER CB HB2 sing N N 414 SER CB HB3 sing N N 415 SER OG HG sing N N 416 SER OXT HXT sing N N 417 THR N CA sing N N 418 THR N H sing N N 419 THR N H2 sing N N 420 THR CA C sing N N 421 THR CA CB sing N N 422 THR CA HA sing N N 423 THR C O doub N N 424 THR C OXT sing N N 425 THR CB OG1 sing N N 426 THR CB CG2 sing N N 427 THR CB HB sing N N 428 THR OG1 HG1 sing N N 429 THR CG2 HG21 sing N N 430 THR CG2 HG22 sing N N 431 THR CG2 HG23 sing N N 432 THR OXT HXT sing N N 433 TYR N CA sing N N 434 TYR N H sing N N 435 TYR N H2 sing N N 436 TYR CA C sing N N 437 TYR CA CB sing N N 438 TYR CA HA sing N N 439 TYR C O doub N N 440 TYR C OXT sing N N 441 TYR CB CG sing N N 442 TYR CB HB2 sing N N 443 TYR CB HB3 sing N N 444 TYR CG CD1 doub Y N 445 TYR CG CD2 sing Y N 446 TYR CD1 CE1 sing Y N 447 TYR CD1 HD1 sing N N 448 TYR CD2 CE2 doub Y N 449 TYR CD2 HD2 sing N N 450 TYR CE1 CZ doub Y N 451 TYR CE1 HE1 sing N N 452 TYR CE2 CZ sing Y N 453 TYR CE2 HE2 sing N N 454 TYR CZ OH sing N N 455 TYR OH HH sing N N 456 TYR OXT HXT sing N N 457 VAL N CA sing N N 458 VAL N H sing N N 459 VAL N H2 sing N N 460 VAL CA C sing N N 461 VAL CA CB sing N N 462 VAL CA HA sing N N 463 VAL C O doub N N 464 VAL C OXT sing N N 465 VAL CB CG1 sing N N 466 VAL CB CG2 sing N N 467 VAL CB HB sing N N 468 VAL CG1 HG11 sing N N 469 VAL CG1 HG12 sing N N 470 VAL CG1 HG13 sing N N 471 VAL CG2 HG21 sing N N 472 VAL CG2 HG22 sing N N 473 VAL CG2 HG23 sing N N 474 VAL OXT HXT sing N N 475 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 RIFABUTIN RBT 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1R2B _pdbx_initial_refinement_model.details 'PDB ENTRY 1R2B' #