HEADER TRANSFERASE 27-FEB-14 4CRL TITLE CRYSTAL STRUCTURE OF HUMAN CDK8-CYCLIN C IN COMPLEX WITH CORTISTATIN A COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIN-DEPENDENT KINASE 8; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 1-403; COMPND 5 SYNONYM: CELL DIVISION PROTEIN KINASE 8, MEDIATOR COMPLEX SUBUNIT COMPND 6 CDK8, MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT CDK8, COMPND 7 PROTEIN KINASE K35, CDK8; COMPND 8 EC: 2.7.11.22; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: CYCLIN-C; COMPND 12 CHAIN: B; COMPND 13 SYNONYM: SRB11 HOMOLOG, HSRB11, CYCLINC; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 14 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 16 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS TRANSFERASE, CYCLIN-DEPENDENT KINASE 8, CDK8, CYCLIN C, CCNC, KEYWDS 2 CORTISTATIN A, MEDIATOR KINASE, MEDIATOR COMPLEX, SUPER-ENHANCER, KEYWDS 3 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR A.G.MYERS,M.D.SHAIR REVDAT 6 20-DEC-23 4CRL 1 REMARK REVDAT 5 06-FEB-19 4CRL 1 REMARK REVDAT 4 30-JAN-19 4CRL 1 REMARK REVDAT 3 14-OCT-15 4CRL 1 JRNL REVDAT 2 07-OCT-15 4CRL 1 JRNL REVDAT 1 23-SEP-15 4CRL 0 JRNL AUTH H.E.PELISH,B.B.LIAU,I.I.NITULESCU,A.TANGPEERACHAIKUL, JRNL AUTH 2 Z.C.POSS,D.H.DA SILVA,B.T.CARUSO,A.AREFOLOV,O.FADEYI, JRNL AUTH 3 A.L.CHRISTIE,K.DU,D.BANKA,E.V.SCHNEIDER,A.JESTEL,G.ZOU,C.SI, JRNL AUTH 4 C.C.EBMEIER,R.T.BRONSON,A.V.KRIVTSOV,A.G.MYERS,N.E.KOHL, JRNL AUTH 5 A.L.KUNG,S.A.ARMSTRONG,M.E.LEMIEUX,D.J.TAATJES,M.D.SHAIR JRNL TITL MEDIATOR KINASE INHIBITION FURTHER ACTIVATES SUPER-ENHANCER- JRNL TITL 2 ASSOCIATED GENES IN AML JRNL REF NATURE V. 526 273 2015 JRNL REFN ISSN 0028-0836 JRNL PMID 26416749 JRNL DOI 10.1038/NATURE14904 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 85.62 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 3 NUMBER OF REFLECTIONS : 31676 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.400 REMARK 3 FREE R VALUE TEST SET COUNT : 1115 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2392 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.25 REMARK 3 BIN R VALUE (WORKING SET) : 0.3010 REMARK 3 BIN FREE R VALUE SET COUNT : 78 REMARK 3 BIN FREE R VALUE : 0.3740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5017 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 50 REMARK 3 SOLVENT ATOMS : 103 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.08000 REMARK 3 B22 (A**2) : -0.10000 REMARK 3 B33 (A**2) : 1.18000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.325 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.252 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.195 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.294 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5062 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4795 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6869 ; 1.413 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10989 ; 1.140 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 600 ; 5.949 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 230 ;35.016 ;23.478 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 848 ;12.464 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;18.095 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 753 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5605 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1191 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2415 ; 4.227 ; 3.547 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2416 ; 4.227 ; 3.549 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3010 ; 5.883 ; 5.967 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3011 ; 5.883 ; 5.970 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2647 ; 5.460 ; 4.101 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2644 ; 5.454 ; 4.096 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3860 ; 7.877 ; 6.664 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5696 ; 9.116 ;16.265 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5695 ; 9.116 ;16.267 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 99 REMARK 3 ORIGIN FOR THE GROUP (A): -16.6920 16.5740 -16.2910 REMARK 3 T TENSOR REMARK 3 T11: 0.1528 T22: 0.1998 REMARK 3 T33: 0.1819 T12: -0.0237 REMARK 3 T13: 0.0756 T23: -0.0323 REMARK 3 L TENSOR REMARK 3 L11: 4.8374 L22: 2.3048 REMARK 3 L33: 1.7436 L12: -3.2177 REMARK 3 L13: 1.7300 L23: -1.1370 REMARK 3 S TENSOR REMARK 3 S11: -0.2387 S12: -0.4375 S13: 0.0278 REMARK 3 S21: 0.2575 S22: 0.2866 S23: 0.1422 REMARK 3 S31: -0.2661 S32: -0.1366 S33: -0.0480 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 100 A 365 REMARK 3 ORIGIN FOR THE GROUP (A): 12.4740 7.1300 -15.3750 REMARK 3 T TENSOR REMARK 3 T11: 0.0992 T22: 0.1211 REMARK 3 T33: 0.0217 T12: -0.0262 REMARK 3 T13: 0.0026 T23: -0.0363 REMARK 3 L TENSOR REMARK 3 L11: 4.4148 L22: 1.9779 REMARK 3 L33: 0.9542 L12: 1.0574 REMARK 3 L13: -0.6688 L23: -0.2450 REMARK 3 S TENSOR REMARK 3 S11: 0.1291 S12: -0.3627 S13: 0.1391 REMARK 3 S21: 0.2014 S22: -0.0300 S23: -0.0551 REMARK 3 S31: -0.1356 S32: 0.0812 S33: -0.0991 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -3 B 266 REMARK 3 ORIGIN FOR THE GROUP (A): -16.3110 21.6150 -45.2150 REMARK 3 T TENSOR REMARK 3 T11: 0.0382 T22: 0.0273 REMARK 3 T33: 0.0920 T12: -0.0296 REMARK 3 T13: -0.0151 T23: 0.0272 REMARK 3 L TENSOR REMARK 3 L11: 1.6052 L22: 2.1453 REMARK 3 L33: 3.3077 L12: -0.5875 REMARK 3 L13: -0.5970 L23: 0.0866 REMARK 3 S TENSOR REMARK 3 S11: 0.0782 S12: -0.0156 S13: 0.0055 REMARK 3 S21: -0.0763 S22: 0.0363 S23: 0.0886 REMARK 3 S31: 0.0518 S32: -0.0985 S33: -0.1145 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES WITH TLS ADDED. HYDROGENS HAVE REMARK 3 BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 4CRL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-FEB-14. REMARK 100 THE DEPOSITION ID IS D_1290059838. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00004 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34548 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 85.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.45000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3RGF REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 0.2M LITHIUM CHLORIDE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.24500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.62350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.62600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 85.62350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.24500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.62600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 115 REMARK 465 ALA A 116 REMARK 465 ASN A 117 REMARK 465 LYS A 118 REMARK 465 LYS A 119 REMARK 465 PRO A 120 REMARK 465 LYS A 185 REMARK 465 PRO A 186 REMARK 465 LEU A 187 REMARK 465 ALA A 188 REMARK 465 ASP A 189 REMARK 465 LEU A 190 REMARK 465 ASP A 191 REMARK 465 PRO A 192 REMARK 465 VAL A 193 REMARK 465 VAL A 194 REMARK 465 GLU A 239 REMARK 465 ASP A 240 REMARK 465 ILE A 241 REMARK 465 LYS A 242 REMARK 465 THR A 243 REMARK 465 SER A 244 REMARK 465 ASN A 245 REMARK 465 THR A 360 REMARK 465 GLU A 361 REMARK 465 GLU A 362 REMARK 465 GLU A 363 REMARK 465 PRO A 364 REMARK 465 ASP A 365 REMARK 465 ASP A 366 REMARK 465 LYS A 367 REMARK 465 GLY A 368 REMARK 465 ASP A 369 REMARK 465 LYS A 370 REMARK 465 LYS A 371 REMARK 465 ASN A 372 REMARK 465 GLN A 373 REMARK 465 GLN A 374 REMARK 465 GLN A 375 REMARK 465 GLN A 376 REMARK 465 GLN A 377 REMARK 465 GLY A 378 REMARK 465 ASN A 379 REMARK 465 ASN A 380 REMARK 465 HIS A 381 REMARK 465 THR A 382 REMARK 465 ASN A 383 REMARK 465 GLY A 384 REMARK 465 THR A 385 REMARK 465 GLY A 386 REMARK 465 HIS A 387 REMARK 465 PRO A 388 REMARK 465 GLY A 389 REMARK 465 ASN A 390 REMARK 465 GLN A 391 REMARK 465 ASP A 392 REMARK 465 SER A 393 REMARK 465 SER A 394 REMARK 465 HIS A 395 REMARK 465 THR A 396 REMARK 465 GLN A 397 REMARK 465 GLY A 398 REMARK 465 PRO A 399 REMARK 465 PRO A 400 REMARK 465 LEU A 401 REMARK 465 LYS A 402 REMARK 465 LYS A 403 REMARK 465 ASN B 265 REMARK 465 SER B 266 REMARK 465 GLU B 267 REMARK 465 GLY B 268 REMARK 465 GLU B 269 REMARK 465 GLN B 270 REMARK 465 GLY B 271 REMARK 465 PRO B 272 REMARK 465 ASN B 273 REMARK 465 GLY B 274 REMARK 465 SER B 275 REMARK 465 GLN B 276 REMARK 465 ASN B 277 REMARK 465 SER B 278 REMARK 465 SER B 279 REMARK 465 TYR B 280 REMARK 465 SER B 281 REMARK 465 GLN B 282 REMARK 465 SER B 283 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 0 CG CD CE NZ REMARK 480 LYS A 6 CD CE NZ REMARK 480 GLU A 23 CG CD OE1 OE2 REMARK 480 LYS A 44 CG CD CE NZ REMARK 480 LYS A 74 CD CE NZ REMARK 480 LYS A 109 CD CE NZ REMARK 480 GLN A 122 CG CD OE1 NE2 REMARK 480 LEU A 179 CG CD1 CD2 REMARK 480 PHE A 180 CG CD1 CD2 CE1 CE2 CZ REMARK 480 ARG A 209 CG CD NE CZ NH1 NH2 REMARK 480 ARG A 237 CG CD NE CZ NH1 NH2 REMARK 480 GLN A 238 C O CB CG CD OE1 NE2 REMARK 480 LYS A 265 CG CD CE NZ REMARK 480 LYS A 271 CG CD CE NZ REMARK 480 LYS A 272 NZ REMARK 480 LYS A 301 CD CE NZ REMARK 480 LYS A 303 CD CE NZ REMARK 480 GLN A 350 CG CD OE1 NE2 REMARK 480 LYS A 355 CD CE NZ REMARK 480 LYS B -1 CE NZ REMARK 480 LYS B 18 CE NZ REMARK 480 LYS B 23 CG CD CE NZ REMARK 480 LYS B 27 CD CE NZ REMARK 480 LYS B 30 CG CD CE NZ REMARK 480 LYS B 56 CD CE NZ REMARK 480 ARG B 58 CD NE CZ NH1 NH2 REMARK 480 PHE B 100 CG CD1 CD2 CE1 CE2 CZ REMARK 480 LYS B 117 CD CE NZ REMARK 480 LYS B 126 CG CD CE NZ REMARK 480 GLU B 127 CG CD OE1 OE2 REMARK 480 ARG B 131 CG CD NE CZ NH1 NH2 REMARK 480 ARG B 214 CD NE CZ NH1 NH2 REMARK 480 SER B 221 OG REMARK 480 GLU B 225 CG CD OE1 OE2 REMARK 480 LYS B 236 CE NZ REMARK 480 LYS B 259 CG CD CE NZ REMARK 480 PRO B 262 CG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 237 CA - CB - CG ANGL. DEV. = 16.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 22 11.30 -143.27 REMARK 500 ASP A 151 38.29 -166.92 REMARK 500 LEU A 316 52.08 -94.57 REMARK 500 SER B 221 77.97 -100.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C1I A 1360 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 1361 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 1362 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 1363 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT B 1265 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT B 1266 DBREF 4CRL A 1 403 UNP P49336 CDK8_HUMAN 1 403 DBREF 4CRL B 1 283 UNP P24863 CCNC_HUMAN 1 283 SEQADV 4CRL ASP A -2 UNP P49336 EXPRESSION TAG SEQADV 4CRL ASP A -1 UNP P49336 EXPRESSION TAG SEQADV 4CRL LYS B -1 UNP P24863 EXPRESSION TAG SEQADV 4CRL ALA B 0 UNP P24863 EXPRESSION TAG SEQRES 1 A 406 ASP ASP LYS MET ASP TYR ASP PHE LYS VAL LYS LEU SER SEQRES 2 A 406 SER GLU ARG GLU ARG VAL GLU ASP LEU PHE GLU TYR GLU SEQRES 3 A 406 GLY CYS LYS VAL GLY ARG GLY THR TYR GLY HIS VAL TYR SEQRES 4 A 406 LYS ALA LYS ARG LYS ASP GLY LYS ASP ASP LYS ASP TYR SEQRES 5 A 406 ALA LEU LYS GLN ILE GLU GLY THR GLY ILE SER MET SER SEQRES 6 A 406 ALA CYS ARG GLU ILE ALA LEU LEU ARG GLU LEU LYS HIS SEQRES 7 A 406 PRO ASN VAL ILE SER LEU GLN LYS VAL PHE LEU SER HIS SEQRES 8 A 406 ALA ASP ARG LYS VAL TRP LEU LEU PHE ASP TYR ALA GLU SEQRES 9 A 406 HIS ASP LEU TRP HIS ILE ILE LYS PHE HIS ARG ALA SER SEQRES 10 A 406 LYS ALA ASN LYS LYS PRO VAL GLN LEU PRO ARG GLY MET SEQRES 11 A 406 VAL LYS SER LEU LEU TYR GLN ILE LEU ASP GLY ILE HIS SEQRES 12 A 406 TYR LEU HIS ALA ASN TRP VAL LEU HIS ARG ASP LEU LYS SEQRES 13 A 406 PRO ALA ASN ILE LEU VAL MET GLY GLU GLY PRO GLU ARG SEQRES 14 A 406 GLY ARG VAL LYS ILE ALA ASP MET GLY PHE ALA ARG LEU SEQRES 15 A 406 PHE ASN SER PRO LEU LYS PRO LEU ALA ASP LEU ASP PRO SEQRES 16 A 406 VAL VAL VAL THR PHE TRP TYR ARG ALA PRO GLU LEU LEU SEQRES 17 A 406 LEU GLY ALA ARG HIS TYR THR LYS ALA ILE ASP ILE TRP SEQRES 18 A 406 ALA ILE GLY CYS ILE PHE ALA GLU LEU LEU THR SER GLU SEQRES 19 A 406 PRO ILE PHE HIS CYS ARG GLN GLU ASP ILE LYS THR SER SEQRES 20 A 406 ASN PRO TYR HIS HIS ASP GLN LEU ASP ARG ILE PHE ASN SEQRES 21 A 406 VAL MET GLY PHE PRO ALA ASP LYS ASP TRP GLU ASP ILE SEQRES 22 A 406 LYS LYS MET PRO GLU HIS SER THR LEU MET LYS ASP PHE SEQRES 23 A 406 ARG ARG ASN THR TYR THR ASN CYS SER LEU ILE LYS TYR SEQRES 24 A 406 MET GLU LYS HIS LYS VAL LYS PRO ASP SER LYS ALA PHE SEQRES 25 A 406 HIS LEU LEU GLN LYS LEU LEU THR MET ASP PRO ILE LYS SEQRES 26 A 406 ARG ILE THR SER GLU GLN ALA MET GLN ASP PRO TYR PHE SEQRES 27 A 406 LEU GLU ASP PRO LEU PRO THR SER ASP VAL PHE ALA GLY SEQRES 28 A 406 CYS GLN ILE PRO TYR PRO LYS ARG GLU PHE LEU THR GLU SEQRES 29 A 406 GLU GLU PRO ASP ASP LYS GLY ASP LYS LYS ASN GLN GLN SEQRES 30 A 406 GLN GLN GLN GLY ASN ASN HIS THR ASN GLY THR GLY HIS SEQRES 31 A 406 PRO GLY ASN GLN ASP SER SER HIS THR GLN GLY PRO PRO SEQRES 32 A 406 LEU LYS LYS SEQRES 1 B 285 LYS ALA MET ALA GLY ASN PHE TRP GLN SER SER HIS TYR SEQRES 2 B 285 LEU GLN TRP ILE LEU ASP LYS GLN ASP LEU LEU LYS GLU SEQRES 3 B 285 ARG GLN LYS ASP LEU LYS PHE LEU SER GLU GLU GLU TYR SEQRES 4 B 285 TRP LYS LEU GLN ILE PHE PHE THR ASN VAL ILE GLN ALA SEQRES 5 B 285 LEU GLY GLU HIS LEU LYS LEU ARG GLN GLN VAL ILE ALA SEQRES 6 B 285 THR ALA THR VAL TYR PHE LYS ARG PHE TYR ALA ARG TYR SEQRES 7 B 285 SER LEU LYS SER ILE ASP PRO VAL LEU MET ALA PRO THR SEQRES 8 B 285 CYS VAL PHE LEU ALA SER LYS VAL GLU GLU PHE GLY VAL SEQRES 9 B 285 VAL SER ASN THR ARG LEU ILE ALA ALA ALA THR SER VAL SEQRES 10 B 285 LEU LYS THR ARG PHE SER TYR ALA PHE PRO LYS GLU PHE SEQRES 11 B 285 PRO TYR ARG MET ASN HIS ILE LEU GLU CYS GLU PHE TYR SEQRES 12 B 285 LEU LEU GLU LEU MET ASP CYS CYS LEU ILE VAL TYR HIS SEQRES 13 B 285 PRO TYR ARG PRO LEU LEU GLN TYR VAL GLN ASP MET GLY SEQRES 14 B 285 GLN GLU ASP MET LEU LEU PRO LEU ALA TRP ARG ILE VAL SEQRES 15 B 285 ASN ASP THR TYR ARG THR ASP LEU CYS LEU LEU TYR PRO SEQRES 16 B 285 PRO PHE MET ILE ALA LEU ALA CYS LEU HIS VAL ALA CYS SEQRES 17 B 285 VAL VAL GLN GLN LYS ASP ALA ARG GLN TRP PHE ALA GLU SEQRES 18 B 285 LEU SER VAL ASP MET GLU LYS ILE LEU GLU ILE ILE ARG SEQRES 19 B 285 VAL ILE LEU LYS LEU TYR GLU GLN TRP LYS ASN PHE ASP SEQRES 20 B 285 GLU ARG LYS GLU MET ALA THR ILE LEU SER LYS MET PRO SEQRES 21 B 285 LYS PRO LYS PRO PRO PRO ASN SER GLU GLY GLU GLN GLY SEQRES 22 B 285 PRO ASN GLY SER GLN ASN SER SER TYR SER GLN SER HET C1I A1360 35 HET FMT A1361 3 HET FMT A1362 3 HET FMT A1363 3 HET FMT B1265 3 HET FMT B1266 3 HETNAM C1I CORTISTATIN A HETNAM FMT FORMIC ACID FORMUL 3 C1I C30 H36 N2 O3 FORMUL 4 FMT 5(C H2 O2) FORMUL 9 HOH *103(H2 O) HELIX 1 1 ASP A 2 ARG A 13 1 12 HELIX 2 2 ARG A 15 LEU A 19 1 5 HELIX 3 3 SER A 60 ARG A 71 1 12 HELIX 4 4 LEU A 104 ALA A 113 1 10 HELIX 5 5 PRO A 124 ASN A 145 1 22 HELIX 6 6 LYS A 153 ALA A 155 5 3 HELIX 7 7 ARG A 178 SER A 182 5 5 HELIX 8 8 ALA A 201 LEU A 206 1 6 HELIX 9 9 THR A 212 SER A 230 1 19 HELIX 10 10 HIS A 248 GLY A 260 1 13 HELIX 11 11 ALA A 263 TRP A 267 5 5 HELIX 12 12 TRP A 267 MET A 273 5 7 HELIX 13 13 GLU A 275 PHE A 283 1 9 HELIX 14 14 ARG A 284 THR A 289 5 6 HELIX 15 15 SER A 292 HIS A 300 1 9 HELIX 16 16 SER A 306 LEU A 316 1 11 HELIX 17 17 ASP A 319 ARG A 323 5 5 HELIX 18 18 THR A 325 GLN A 331 1 7 HELIX 19 19 ASP A 332 LEU A 336 5 5 HELIX 20 20 ASN B 4 GLN B 7 5 4 HELIX 21 21 SER B 8 TRP B 14 1 7 HELIX 22 22 ASP B 17 LYS B 30 1 14 HELIX 23 23 SER B 33 LYS B 56 1 24 HELIX 24 24 ARG B 58 TYR B 76 1 19 HELIX 25 25 ASP B 82 GLU B 98 1 17 HELIX 26 26 SER B 104 PHE B 120 1 17 HELIX 27 27 ARG B 131 MET B 146 1 16 HELIX 28 28 PRO B 155 GLY B 167 1 13 HELIX 29 29 GLN B 168 TYR B 184 1 17 HELIX 30 30 ASP B 187 TYR B 192 1 6 HELIX 31 31 PRO B 193 GLN B 209 1 17 HELIX 32 32 ALA B 213 GLU B 219 1 7 HELIX 33 33 ASP B 223 PHE B 244 1 22 HELIX 34 34 ASP B 245 MET B 257 1 13 SHEET 1 AA 2 PHE A 20 GLU A 21 0 SHEET 2 AA 2 GLY A 33 ARG A 40 -1 O LYS A 39 N GLU A 21 SHEET 1 AB 2 LYS A 26 ARG A 29 0 SHEET 2 AB 2 GLY A 33 ARG A 40 -1 O VAL A 35 N VAL A 27 SHEET 1 AC 5 LEU A 81 SER A 87 0 SHEET 2 AC 5 LYS A 92 ASP A 98 -1 O LYS A 92 N SER A 87 SHEET 3 AC 5 TYR A 49 ILE A 54 -1 O ALA A 50 N PHE A 97 SHEET 4 AC 5 GLY A 33 ARG A 40 -1 O HIS A 34 N GLN A 53 SHEET 5 AC 5 LYS A 26 ARG A 29 -1 N VAL A 27 O VAL A 35 SHEET 1 AD 5 LEU A 81 SER A 87 0 SHEET 2 AD 5 LYS A 92 ASP A 98 -1 O LYS A 92 N SER A 87 SHEET 3 AD 5 TYR A 49 ILE A 54 -1 O ALA A 50 N PHE A 97 SHEET 4 AD 5 GLY A 33 ARG A 40 -1 O HIS A 34 N GLN A 53 SHEET 5 AD 5 PHE A 20 GLU A 21 -1 O GLU A 21 N LYS A 39 SHEET 1 AE 3 HIS A 102 ASP A 103 0 SHEET 2 AE 3 ILE A 157 VAL A 159 -1 O VAL A 159 N HIS A 102 SHEET 3 AE 3 VAL A 169 ILE A 171 -1 O LYS A 170 N LEU A 158 CISPEP 1 PHE A 176 ALA A 177 0 -13.69 CISPEP 2 ASP A 338 PRO A 339 0 -3.70 SITE 1 AC1 9 VAL A 27 ALA A 50 ILE A 79 ASP A 98 SITE 2 AC1 9 ALA A 100 TRP A 105 ALA A 155 LEU A 158 SITE 3 AC1 9 ARG A 356 SITE 1 AC2 4 PRO A 124 GLY A 126 MET A 127 HOH A2070 SITE 1 AC3 5 GLU A 101 HIS A 102 GLY A 161 GLU A 162 SITE 2 AC3 5 ILE A 351 SITE 1 AC4 4 LYS A 52 GLU A 66 PHE A 97 ASP A 173 SITE 1 AC5 2 ALA B 74 ARG B 75 SITE 1 AC6 5 GLN B 49 GLN B 59 ALA B 63 TYR B 156 SITE 2 AC6 5 TYR B 184 CRYST1 70.490 71.252 171.247 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014186 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014035 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005840 0.00000