data_4CUD # _entry.id 4CUD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4CUD pdb_00004cud 10.2210/pdb4cud/pdb PDBE EBI-59191 ? ? WWPDB D_1290059191 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4CUE unspecified 'HUMAN NOTCH-1 EGFS 11-13' PDB 4CUF unspecified 'HUMAN NOTCH-1 EGFS 11-13 FUCOSE' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4CUD _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-03-18 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Taylor, P.' 1 ? 'Takeuchi, H.' 2 ? 'Sheppard, D.' 3 ? 'Chillakuri, C.' 4 ? 'Lea, S.M.' 5 ? 'Haltiwanger, R.S.' 6 ? 'Handford, P.A.' 7 ? # _citation.id primary _citation.title 'Fringe-Mediated Extension of O-Linked Fucose in the Ligand-Binding Region of Notch1 Increases Binding to Mammalian Notch Ligands.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 111 _citation.page_first 7290 _citation.page_last ? _citation.year 2014 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24803430 _citation.pdbx_database_id_DOI 10.1073/PNAS.1319683111 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Taylor, P.' 1 ? primary 'Takeuchi, H.' 2 ? primary 'Sheppard, D.' 3 ? primary 'Chillakuri, C.' 4 ? primary 'Lea, S.M.' 5 ? primary 'Haltiwanger, R.S.' 6 ? primary 'Handford, P.A.' 7 ? # _cell.entry_id 4CUD _cell.length_a 28.290 _cell.length_b 28.290 _cell.length_c 282.732 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CUD _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'NEUROGENIC LOCUS NOTCH HOMOLOG PROTEIN 1' 14857.604 1 ? ? 'EGF 11-13, RESIDUES 410-526' 'O-FUCOSE MONOSACCHARIDE AT T466' 2 non-polymer man alpha-L-fucopyranose 164.156 1 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 4 ? ? ? ? 4 water nat water 18.015 56 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'NOTCH 1, HN1, TRANSLOCATION-ASSOCIATED NOTCH PROTEIN TAN-1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SAQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCE VNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLHHILDAQKMVWNHR ; _entity_poly.pdbx_seq_one_letter_code_can ;SAQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCE VNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLHHILDAQKMVWNHR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ALA n 1 3 GLN n 1 4 ASP n 1 5 VAL n 1 6 ASP n 1 7 GLU n 1 8 CYS n 1 9 SER n 1 10 LEU n 1 11 GLY n 1 12 ALA n 1 13 ASN n 1 14 PRO n 1 15 CYS n 1 16 GLU n 1 17 HIS n 1 18 ALA n 1 19 GLY n 1 20 LYS n 1 21 CYS n 1 22 ILE n 1 23 ASN n 1 24 THR n 1 25 LEU n 1 26 GLY n 1 27 SER n 1 28 PHE n 1 29 GLU n 1 30 CYS n 1 31 GLN n 1 32 CYS n 1 33 LEU n 1 34 GLN n 1 35 GLY n 1 36 TYR n 1 37 THR n 1 38 GLY n 1 39 PRO n 1 40 ARG n 1 41 CYS n 1 42 GLU n 1 43 ILE n 1 44 ASP n 1 45 VAL n 1 46 ASN n 1 47 GLU n 1 48 CYS n 1 49 VAL n 1 50 SER n 1 51 ASN n 1 52 PRO n 1 53 CYS n 1 54 GLN n 1 55 ASN n 1 56 ASP n 1 57 ALA n 1 58 THR n 1 59 CYS n 1 60 LEU n 1 61 ASP n 1 62 GLN n 1 63 ILE n 1 64 GLY n 1 65 GLU n 1 66 PHE n 1 67 GLN n 1 68 CYS n 1 69 ILE n 1 70 CYS n 1 71 MET n 1 72 PRO n 1 73 GLY n 1 74 TYR n 1 75 GLU n 1 76 GLY n 1 77 VAL n 1 78 HIS n 1 79 CYS n 1 80 GLU n 1 81 VAL n 1 82 ASN n 1 83 THR n 1 84 ASP n 1 85 GLU n 1 86 CYS n 1 87 ALA n 1 88 SER n 1 89 SER n 1 90 PRO n 1 91 CYS n 1 92 LEU n 1 93 HIS n 1 94 ASN n 1 95 GLY n 1 96 ARG n 1 97 CYS n 1 98 LEU n 1 99 ASP n 1 100 LYS n 1 101 ILE n 1 102 ASN n 1 103 GLU n 1 104 PHE n 1 105 GLN n 1 106 CYS n 1 107 GLU n 1 108 CYS n 1 109 PRO n 1 110 THR n 1 111 GLY n 1 112 PHE n 1 113 THR n 1 114 GLY n 1 115 HIS n 1 116 LEU n 1 117 CYS n 1 118 GLN n 1 119 VAL n 1 120 ASP n 1 121 LEU n 1 122 HIS n 1 123 HIS n 1 124 ILE n 1 125 LEU n 1 126 ASP n 1 127 ALA n 1 128 GLN n 1 129 LYS n 1 130 MET n 1 131 VAL n 1 132 TRP n 1 133 ASN n 1 134 HIS n 1 135 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PQE30 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NOTC1_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P46531 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4CUD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 118 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P46531 _struct_ref_seq.db_align_beg 410 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 526 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 410 _struct_ref_seq.pdbx_auth_seq_align_end 526 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4CUD SER A 1 ? UNP P46531 ? ? 'expression tag' 409 1 1 4CUD VAL A 119 ? UNP P46531 ? ? 'expression tag' 527 2 1 4CUD ASP A 120 ? UNP P46531 ? ? 'expression tag' 528 3 1 4CUD LEU A 121 ? UNP P46531 ? ? 'expression tag' 529 4 1 4CUD HIS A 122 ? UNP P46531 ? ? 'expression tag' 530 5 1 4CUD HIS A 123 ? UNP P46531 ? ? 'expression tag' 531 6 1 4CUD ILE A 124 ? UNP P46531 ? ? 'expression tag' 532 7 1 4CUD LEU A 125 ? UNP P46531 ? ? 'expression tag' 533 8 1 4CUD ASP A 126 ? UNP P46531 ? ? 'expression tag' 534 9 1 4CUD ALA A 127 ? UNP P46531 ? ? 'expression tag' 535 10 1 4CUD GLN A 128 ? UNP P46531 ? ? 'expression tag' 536 11 1 4CUD LYS A 129 ? UNP P46531 ? ? 'expression tag' 537 12 1 4CUD MET A 130 ? UNP P46531 ? ? 'expression tag' 538 13 1 4CUD VAL A 131 ? UNP P46531 ? ? 'expression tag' 539 14 1 4CUD TRP A 132 ? UNP P46531 ? ? 'expression tag' 540 15 1 4CUD ASN A 133 ? UNP P46531 ? ? 'expression tag' 541 16 1 4CUD HIS A 134 ? UNP P46531 ? ? 'expression tag' 542 17 1 4CUD ARG A 135 ? UNP P46531 ? ? 'expression tag' 543 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4CUD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.21 _exptl_crystal.density_percent_sol 44.3 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'pH 6.0' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2012-03-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.917 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04-1' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04-1 _diffrn_source.pdbx_wavelength 0.917 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4CUD _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 24.14 _reflns.d_resolution_high 1.85 _reflns.number_obs 10837 _reflns.number_all ? _reflns.percent_possible_obs 93.5 _reflns.pdbx_Rmerge_I_obs 0.07 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 0.00 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.3 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.85 _reflns_shell.d_res_low 1.90 _reflns_shell.percent_possible_all 95.3 _reflns_shell.Rmerge_I_obs 0.42 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.00 _reflns_shell.pdbx_redundancy 5.2 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4CUD _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 10837 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 24.14 _refine.ls_d_res_high 1.85 _refine.ls_percent_reflns_obs 91.94 _refine.ls_R_factor_obs 0.22572 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22406 _refine.ls_R_factor_R_free 0.25992 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 540 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.933 _refine.correlation_coeff_Fo_to_Fc_free 0.900 _refine.B_iso_mean 23.172 _refine.aniso_B[1][1] 0.01 _refine.aniso_B[2][2] 0.01 _refine.aniso_B[3][3] -0.02 _refine.aniso_B[1][2] 0.01 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 2VJ3' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.164 _refine.pdbx_overall_ESU_R_Free 0.151 _refine.overall_SU_ML 0.101 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.319 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 914 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 56 _refine_hist.number_atoms_total 984 _refine_hist.d_res_high 1.85 _refine_hist.d_res_low 24.14 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.020 ? 951 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.112 1.956 ? 1297 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.623 5.000 ? 121 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.396 26.667 ? 48 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.661 15.000 ? 146 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 24.570 15.000 ? 2 'X-RAY DIFFRACTION' ? r_chiral_restr 0.072 0.200 ? 142 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.021 ? 734 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.215 0.2 ? 454 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.032 0.2 ? 660 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.082 0.2 ? 26 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.096 0.2 ? 14 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.22 0.2 ? 50 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.107 0.2 ? 7 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined 0.064 0.2 ? 1 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.850 _refine_ls_shell.d_res_low 1.898 _refine_ls_shell.number_reflns_R_work 684 _refine_ls_shell.R_factor_R_work 0.288 _refine_ls_shell.percent_reflns_obs 92.78 _refine_ls_shell.R_factor_R_free 0.354 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 36 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 4CUD _struct.title 'Human Notch1 EGF domains 11-13 mutant fucosylated at T466' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4CUD _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text ;TRANSCRIPTION, METAL-BINDING, TRANSMEMBRANE, DEVELOPMENTAL, PROTEIN, NOTCH SIGNALING PATHWAY, DIFFERENTIATION, PHOSPHORYLATION, EGF-LIKE DOMAIN, REGULATION, RECEPTOR, ACTIVATOR, ANK REPEAT, SIGNALLING, GLYCOPROTEIN, EXTRACELLULAR, EGF, JAGGED, NUCLEUS, MEMBRANE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id ASP _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 6 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id LEU _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 10 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ASP _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 414 _struct_conf.end_auth_comp_id LEU _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 418 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 8 SG ? ? ? 1_555 A CYS 21 SG ? ? A CYS 416 A CYS 429 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf2 disulf ? ? A CYS 15 SG ? ? ? 1_555 A CYS 30 SG ? ? A CYS 423 A CYS 438 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf3 disulf ? ? A CYS 32 SG ? ? ? 1_555 A CYS 41 SG ? ? A CYS 440 A CYS 449 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf4 disulf ? ? A CYS 48 SG ? ? ? 1_555 A CYS 59 SG ? ? A CYS 456 A CYS 467 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf5 disulf ? ? A CYS 53 SG ? ? ? 1_555 A CYS 68 SG ? ? A CYS 461 A CYS 476 1_555 ? ? ? ? ? ? ? 2.020 ? ? disulf6 disulf ? ? A CYS 70 SG ? ? ? 1_555 A CYS 79 SG ? ? A CYS 478 A CYS 487 1_555 ? ? ? ? ? ? ? 2.045 ? ? disulf7 disulf ? ? A CYS 86 SG ? ? ? 1_555 A CYS 97 SG ? ? A CYS 494 A CYS 505 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf8 disulf ? ? A CYS 91 SG ? ? ? 1_555 A CYS 106 SG ? ? A CYS 499 A CYS 514 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf9 disulf ? ? A CYS 108 SG ? ? ? 1_555 A CYS 117 SG ? ? A CYS 516 A CYS 525 1_555 ? ? ? ? ? ? ? 2.029 ? ? covale1 covale one ? B FUC . C1 ? ? ? 1_555 A THR 58 OG1 ? ? A FUC 1 A THR 466 1_555 ? ? ? ? ? ? ? 1.450 ? O-Glycosylation metalc1 metalc ? ? A ASP 4 OD1 ? ? ? 1_555 E CA . CA ? ? A ASP 412 A CA 1533 1_555 ? ? ? ? ? ? ? 2.597 ? ? metalc2 metalc ? ? A ASP 4 OD2 ? ? ? 1_555 E CA . CA ? ? A ASP 412 A CA 1533 1_555 ? ? ? ? ? ? ? 3.131 ? ? metalc3 metalc ? ? A VAL 5 O ? ? ? 1_555 E CA . CA ? ? A VAL 413 A CA 1533 1_555 ? ? ? ? ? ? ? 2.468 ? ? metalc4 metalc ? ? A GLU 7 OE1 ? ? ? 1_555 E CA . CA ? ? A GLU 415 A CA 1533 1_555 ? ? ? ? ? ? ? 2.429 ? ? metalc5 metalc ? ? A ASN 23 OD1 ? ? ? 1_555 E CA . CA ? ? A ASN 431 A CA 1533 1_555 ? ? ? ? ? ? ? 2.309 ? ? metalc6 metalc ? ? A THR 24 O ? ? ? 1_555 E CA . CA ? ? A THR 432 A CA 1533 1_555 ? ? ? ? ? ? ? 2.385 ? ? metalc7 metalc ? ? A SER 27 O ? ? ? 1_555 E CA . CA ? ? A SER 435 A CA 1533 1_555 ? ? ? ? ? ? ? 2.408 ? ? metalc8 metalc ? ? A ASP 44 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 452 A CA 1531 1_555 ? ? ? ? ? ? ? 2.409 ? ? metalc9 metalc ? ? A VAL 45 O ? ? ? 1_555 C CA . CA ? ? A VAL 453 A CA 1531 1_555 ? ? ? ? ? ? ? 2.292 ? ? metalc10 metalc ? ? A GLU 47 OE1 ? ? ? 1_555 C CA . CA ? ? A GLU 455 A CA 1531 1_555 ? ? ? ? ? ? ? 2.399 ? ? metalc11 metalc ? ? A ASP 61 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 469 A CA 1531 1_555 ? ? ? ? ? ? ? 2.422 ? ? metalc12 metalc ? ? A GLN 62 O ? ? ? 1_555 C CA . CA ? ? A GLN 470 A CA 1531 1_555 ? ? ? ? ? ? ? 2.396 ? ? metalc13 metalc ? ? A ASN 82 OD1 ? ? ? 1_555 D CA . CA ? ? A ASN 490 A CA 1532 1_555 ? ? ? ? ? ? ? 2.314 ? ? metalc14 metalc ? ? A THR 83 O ? ? ? 1_555 D CA . CA ? ? A THR 491 A CA 1532 1_555 ? ? ? ? ? ? ? 2.199 ? ? metalc15 metalc ? ? A GLU 85 OE1 ? ? ? 1_555 D CA . CA ? ? A GLU 493 A CA 1532 1_555 ? ? ? ? ? ? ? 2.337 ? ? metalc16 metalc ? ? A ASP 99 OD1 ? ? ? 1_555 D CA . CA ? ? A ASP 507 A CA 1532 1_555 ? ? ? ? ? ? ? 2.582 ? ? metalc17 metalc ? ? A ASP 99 OD2 ? ? ? 1_555 D CA . CA ? ? A ASP 507 A CA 1532 1_555 ? ? ? ? ? ? ? 2.484 ? ? metalc18 metalc ? ? A LYS 100 O ? ? ? 1_555 D CA . CA ? ? A LYS 508 A CA 1532 1_555 ? ? ? ? ? ? ? 2.260 ? ? metalc19 metalc ? ? A GLU 103 OE2 ? ? ? 1_555 F CA . CA ? ? A GLU 511 A CA 1534 1_555 ? ? ? ? ? ? ? 2.355 ? ? metalc20 metalc ? ? A GLU 103 OE2 ? ? ? 4_645 F CA . CA ? ? A GLU 511 A CA 1534 1_555 ? ? ? ? ? ? ? 2.357 ? ? metalc21 metalc ? ? A GLU 103 OE1 ? ? ? 4_645 F CA . CA ? ? A GLU 511 A CA 1534 1_555 ? ? ? ? ? ? ? 3.151 ? ? metalc22 metalc ? ? A GLU 103 OE1 ? ? ? 1_555 F CA . CA ? ? A GLU 511 A CA 1534 1_555 ? ? ? ? ? ? ? 3.151 ? ? metalc23 metalc ? ? A HIS 115 NE2 ? ? ? 1_555 F CA . CA ? ? A HIS 523 A CA 1534 1_555 ? ? ? ? ? ? ? 2.682 ? ? metalc24 metalc ? ? A HIS 115 NE2 ? ? ? 4_645 F CA . CA ? ? A HIS 523 A CA 1534 1_555 ? ? ? ? ? ? ? 2.683 ? ? metalc25 metalc ? ? C CA . CA ? ? ? 1_555 G HOH . O ? ? A CA 1531 A HOH 2012 1_555 ? ? ? ? ? ? ? 2.409 ? ? metalc26 metalc ? ? C CA . CA ? ? ? 1_555 G HOH . O ? ? A CA 1531 A HOH 2015 1_555 ? ? ? ? ? ? ? 2.520 ? ? metalc27 metalc ? ? D CA . CA ? ? ? 1_555 G HOH . O ? ? A CA 1532 A HOH 2032 1_555 ? ? ? ? ? ? ? 2.402 ? ? metalc28 metalc ? ? E CA . CA ? ? ? 1_555 G HOH . O ? ? A CA 1533 A HOH 2004 1_555 ? ? ? ? ? ? ? 2.459 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 2 ? AC ? 2 ? AD ? 2 ? AE ? 2 ? AF ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? anti-parallel AC 1 2 ? anti-parallel AD 1 2 ? anti-parallel AE 1 2 ? anti-parallel AF 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LYS A 20 ? ASN A 23 ? LYS A 428 ASN A 431 AA 2 PHE A 28 ? GLN A 31 ? PHE A 436 GLN A 439 AB 1 TYR A 36 ? THR A 37 ? TYR A 444 THR A 445 AB 2 ILE A 43 ? ASP A 44 ? ILE A 451 ASP A 452 AC 1 THR A 58 ? GLN A 62 ? THR A 466 GLN A 470 AC 2 GLU A 65 ? ILE A 69 ? GLU A 473 ILE A 477 AD 1 TYR A 74 ? GLU A 75 ? TYR A 482 GLU A 483 AD 2 VAL A 81 ? ASN A 82 ? VAL A 489 ASN A 490 AE 1 ARG A 96 ? ASP A 99 ? ARG A 504 ASP A 507 AE 2 PHE A 104 ? GLU A 107 ? PHE A 512 GLU A 515 AF 1 PHE A 112 ? THR A 113 ? PHE A 520 THR A 521 AF 2 VAL A 119 ? ASP A 120 ? VAL A 527 ASP A 528 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ILE A 22 ? N ILE A 430 O GLU A 29 ? O GLU A 437 AB 1 2 N THR A 37 ? N THR A 445 O ILE A 43 ? O ILE A 451 AC 1 2 N GLN A 62 ? N GLN A 470 O GLU A 65 ? O GLU A 473 AD 1 2 N GLU A 75 ? N GLU A 483 O VAL A 81 ? O VAL A 489 AE 1 2 N LEU A 98 ? N LEU A 506 O GLN A 105 ? O GLN A 513 AF 1 2 N THR A 113 ? N THR A 521 O VAL A 119 ? O VAL A 527 # _database_PDB_matrix.entry_id 4CUD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4CUD _atom_sites.fract_transf_matrix[1][1] 0.035348 _atom_sites.fract_transf_matrix[1][2] 0.020408 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.040817 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003537 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 409 ? ? ? A . n A 1 2 ALA 2 410 ? ? ? A . n A 1 3 GLN 3 411 ? ? ? A . n A 1 4 ASP 4 412 412 ASP ASP A . n A 1 5 VAL 5 413 413 VAL VAL A . n A 1 6 ASP 6 414 414 ASP ASP A . n A 1 7 GLU 7 415 415 GLU GLU A . n A 1 8 CYS 8 416 416 CYS CYS A . n A 1 9 SER 9 417 417 SER SER A . n A 1 10 LEU 10 418 418 LEU LEU A . n A 1 11 GLY 11 419 419 GLY GLY A . n A 1 12 ALA 12 420 420 ALA ALA A . n A 1 13 ASN 13 421 421 ASN ASN A . n A 1 14 PRO 14 422 422 PRO PRO A . n A 1 15 CYS 15 423 423 CYS CYS A . n A 1 16 GLU 16 424 424 GLU GLU A . n A 1 17 HIS 17 425 425 HIS HIS A . n A 1 18 ALA 18 426 426 ALA ALA A . n A 1 19 GLY 19 427 427 GLY GLY A . n A 1 20 LYS 20 428 428 LYS LYS A . n A 1 21 CYS 21 429 429 CYS CYS A . n A 1 22 ILE 22 430 430 ILE ILE A . n A 1 23 ASN 23 431 431 ASN ASN A . n A 1 24 THR 24 432 432 THR THR A . n A 1 25 LEU 25 433 433 LEU LEU A . n A 1 26 GLY 26 434 434 GLY GLY A . n A 1 27 SER 27 435 435 SER SER A . n A 1 28 PHE 28 436 436 PHE PHE A . n A 1 29 GLU 29 437 437 GLU GLU A . n A 1 30 CYS 30 438 438 CYS CYS A . n A 1 31 GLN 31 439 439 GLN GLN A . n A 1 32 CYS 32 440 440 CYS CYS A . n A 1 33 LEU 33 441 441 LEU LEU A . n A 1 34 GLN 34 442 442 GLN GLN A . n A 1 35 GLY 35 443 443 GLY GLY A . n A 1 36 TYR 36 444 444 TYR TYR A . n A 1 37 THR 37 445 445 THR THR A . n A 1 38 GLY 38 446 446 GLY GLY A . n A 1 39 PRO 39 447 447 PRO PRO A . n A 1 40 ARG 40 448 448 ARG ARG A . n A 1 41 CYS 41 449 449 CYS CYS A . n A 1 42 GLU 42 450 450 GLU GLU A . n A 1 43 ILE 43 451 451 ILE ILE A . n A 1 44 ASP 44 452 452 ASP ASP A . n A 1 45 VAL 45 453 453 VAL VAL A . n A 1 46 ASN 46 454 454 ASN ASN A . n A 1 47 GLU 47 455 455 GLU GLU A . n A 1 48 CYS 48 456 456 CYS CYS A . n A 1 49 VAL 49 457 457 VAL VAL A . n A 1 50 SER 50 458 458 SER SER A . n A 1 51 ASN 51 459 459 ASN ASN A . n A 1 52 PRO 52 460 460 PRO PRO A . n A 1 53 CYS 53 461 461 CYS CYS A . n A 1 54 GLN 54 462 462 GLN GLN A . n A 1 55 ASN 55 463 463 ASN ASN A . n A 1 56 ASP 56 464 464 ASP ASP A . n A 1 57 ALA 57 465 465 ALA ALA A . n A 1 58 THR 58 466 466 THR THR A . n A 1 59 CYS 59 467 467 CYS CYS A . n A 1 60 LEU 60 468 468 LEU LEU A . n A 1 61 ASP 61 469 469 ASP ASP A . n A 1 62 GLN 62 470 470 GLN GLN A . n A 1 63 ILE 63 471 471 ILE ILE A . n A 1 64 GLY 64 472 472 GLY GLY A . n A 1 65 GLU 65 473 473 GLU GLU A . n A 1 66 PHE 66 474 474 PHE PHE A . n A 1 67 GLN 67 475 475 GLN GLN A . n A 1 68 CYS 68 476 476 CYS CYS A . n A 1 69 ILE 69 477 477 ILE ILE A . n A 1 70 CYS 70 478 478 CYS CYS A . n A 1 71 MET 71 479 479 MET MET A . n A 1 72 PRO 72 480 480 PRO PRO A . n A 1 73 GLY 73 481 481 GLY GLY A . n A 1 74 TYR 74 482 482 TYR TYR A . n A 1 75 GLU 75 483 483 GLU GLU A . n A 1 76 GLY 76 484 484 GLY GLY A . n A 1 77 VAL 77 485 485 VAL VAL A . n A 1 78 HIS 78 486 486 HIS HIS A . n A 1 79 CYS 79 487 487 CYS CYS A . n A 1 80 GLU 80 488 488 GLU GLU A . n A 1 81 VAL 81 489 489 VAL VAL A . n A 1 82 ASN 82 490 490 ASN ASN A . n A 1 83 THR 83 491 491 THR THR A . n A 1 84 ASP 84 492 492 ASP ASP A . n A 1 85 GLU 85 493 493 GLU GLU A . n A 1 86 CYS 86 494 494 CYS CYS A . n A 1 87 ALA 87 495 495 ALA ALA A . n A 1 88 SER 88 496 496 SER SER A . n A 1 89 SER 89 497 497 SER SER A . n A 1 90 PRO 90 498 498 PRO PRO A . n A 1 91 CYS 91 499 499 CYS CYS A . n A 1 92 LEU 92 500 500 LEU LEU A . n A 1 93 HIS 93 501 501 HIS HIS A . n A 1 94 ASN 94 502 502 ASN ASN A . n A 1 95 GLY 95 503 503 GLY GLY A . n A 1 96 ARG 96 504 504 ARG ARG A . n A 1 97 CYS 97 505 505 CYS CYS A . n A 1 98 LEU 98 506 506 LEU LEU A . n A 1 99 ASP 99 507 507 ASP ASP A . n A 1 100 LYS 100 508 508 LYS LYS A . n A 1 101 ILE 101 509 509 ILE ILE A . n A 1 102 ASN 102 510 510 ASN ASN A . n A 1 103 GLU 103 511 511 GLU GLU A . n A 1 104 PHE 104 512 512 PHE PHE A . n A 1 105 GLN 105 513 513 GLN GLN A . n A 1 106 CYS 106 514 514 CYS CYS A . n A 1 107 GLU 107 515 515 GLU GLU A . n A 1 108 CYS 108 516 516 CYS CYS A . n A 1 109 PRO 109 517 517 PRO PRO A . n A 1 110 THR 110 518 518 THR THR A . n A 1 111 GLY 111 519 519 GLY GLY A . n A 1 112 PHE 112 520 520 PHE PHE A . n A 1 113 THR 113 521 521 THR THR A . n A 1 114 GLY 114 522 522 GLY GLY A . n A 1 115 HIS 115 523 523 HIS HIS A . n A 1 116 LEU 116 524 524 LEU LEU A . n A 1 117 CYS 117 525 525 CYS CYS A . n A 1 118 GLN 118 526 526 GLN GLN A . n A 1 119 VAL 119 527 527 VAL VAL A . n A 1 120 ASP 120 528 528 ASP ASP A . n A 1 121 LEU 121 529 529 LEU LEU A . n A 1 122 HIS 122 530 530 HIS HIS A . n A 1 123 HIS 123 531 531 HIS HIS A . n A 1 124 ILE 124 532 532 ILE ILE A . n A 1 125 LEU 125 533 533 LEU LEU A . n A 1 126 ASP 126 534 ? ? ? A . n A 1 127 ALA 127 535 ? ? ? A . n A 1 128 GLN 128 536 ? ? ? A . n A 1 129 LYS 129 537 ? ? ? A . n A 1 130 MET 130 538 ? ? ? A . n A 1 131 VAL 131 539 ? ? ? A . n A 1 132 TRP 132 540 ? ? ? A . n A 1 133 ASN 133 541 ? ? ? A . n A 1 134 HIS 134 542 ? ? ? A . n A 1 135 ARG 135 543 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FUC 1 1 1 FUC FUC A . C 3 CA 1 1531 1531 CA CA A . D 3 CA 1 1532 1532 CA CA A . E 3 CA 1 1533 1533 CA CA A . F 3 CA 1 1534 1534 CA CA A . G 4 HOH 1 2001 2001 HOH HOH A . G 4 HOH 2 2002 2002 HOH HOH A . G 4 HOH 3 2003 2003 HOH HOH A . G 4 HOH 4 2004 2004 HOH HOH A . G 4 HOH 5 2005 2005 HOH HOH A . G 4 HOH 6 2006 2006 HOH HOH A . G 4 HOH 7 2007 2007 HOH HOH A . G 4 HOH 8 2008 2008 HOH HOH A . G 4 HOH 9 2009 2009 HOH HOH A . G 4 HOH 10 2010 2010 HOH HOH A . G 4 HOH 11 2011 2011 HOH HOH A . G 4 HOH 12 2012 2012 HOH HOH A . G 4 HOH 13 2013 2013 HOH HOH A . G 4 HOH 14 2014 2014 HOH HOH A . G 4 HOH 15 2015 2015 HOH HOH A . G 4 HOH 16 2016 2016 HOH HOH A . G 4 HOH 17 2017 2017 HOH HOH A . G 4 HOH 18 2018 2018 HOH HOH A . G 4 HOH 19 2019 2019 HOH HOH A . G 4 HOH 20 2020 2020 HOH HOH A . G 4 HOH 21 2021 2021 HOH HOH A . G 4 HOH 22 2022 2022 HOH HOH A . G 4 HOH 23 2023 2023 HOH HOH A . G 4 HOH 24 2024 2024 HOH HOH A . G 4 HOH 25 2025 2025 HOH HOH A . G 4 HOH 26 2026 2026 HOH HOH A . G 4 HOH 27 2027 2027 HOH HOH A . G 4 HOH 28 2028 2028 HOH HOH A . G 4 HOH 29 2029 2029 HOH HOH A . G 4 HOH 30 2030 2030 HOH HOH A . G 4 HOH 31 2031 2031 HOH HOH A . G 4 HOH 32 2032 2032 HOH HOH A . G 4 HOH 33 2033 2033 HOH HOH A . G 4 HOH 34 2034 2034 HOH HOH A . G 4 HOH 35 2035 2035 HOH HOH A . G 4 HOH 36 2036 2036 HOH HOH A . G 4 HOH 37 2037 2037 HOH HOH A . G 4 HOH 38 2038 2038 HOH HOH A . G 4 HOH 39 2039 2039 HOH HOH A . G 4 HOH 40 2040 2040 HOH HOH A . G 4 HOH 41 2041 2041 HOH HOH A . G 4 HOH 42 2042 2042 HOH HOH A . G 4 HOH 43 2043 2043 HOH HOH A . G 4 HOH 44 2044 2044 HOH HOH A . G 4 HOH 45 2045 2045 HOH HOH A . G 4 HOH 46 2046 2046 HOH HOH A . G 4 HOH 47 2047 2047 HOH HOH A . G 4 HOH 48 2048 2048 HOH HOH A . G 4 HOH 49 2049 2049 HOH HOH A . G 4 HOH 50 2050 2050 HOH HOH A . G 4 HOH 51 2051 2051 HOH HOH A . G 4 HOH 52 2052 2052 HOH HOH A . G 4 HOH 53 2053 2053 HOH HOH A . G 4 HOH 54 2054 2054 HOH HOH A . G 4 HOH 55 2055 2055 HOH HOH A . G 4 HOH 56 2056 2056 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id THR _pdbx_struct_mod_residue.label_seq_id 58 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id THR _pdbx_struct_mod_residue.auth_seq_id 466 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id THR _pdbx_struct_mod_residue.details 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2210 ? 1 MORE -45.3 ? 1 'SSA (A^2)' 15120 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_645 y+1,x-1,-z -0.5000000000 0.8660254038 0.0000000000 42.4350000000 0.8660254038 0.5000000000 0.0000000000 -24.4998586731 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id CA _pdbx_struct_special_symmetry.auth_seq_id 1534 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id CA _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 4 ? A ASP 412 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 OD2 ? A ASP 4 ? A ASP 412 ? 1_555 43.6 ? 2 OD1 ? A ASP 4 ? A ASP 412 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? A VAL 5 ? A VAL 413 ? 1_555 79.2 ? 3 OD2 ? A ASP 4 ? A ASP 412 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? A VAL 5 ? A VAL 413 ? 1_555 72.8 ? 4 OD1 ? A ASP 4 ? A ASP 412 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 OE1 ? A GLU 7 ? A GLU 415 ? 1_555 136.9 ? 5 OD2 ? A ASP 4 ? A ASP 412 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 OE1 ? A GLU 7 ? A GLU 415 ? 1_555 139.2 ? 6 O ? A VAL 5 ? A VAL 413 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 OE1 ? A GLU 7 ? A GLU 415 ? 1_555 69.0 ? 7 OD1 ? A ASP 4 ? A ASP 412 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 OD1 ? A ASN 23 ? A ASN 431 ? 1_555 123.9 ? 8 OD2 ? A ASP 4 ? A ASP 412 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 OD1 ? A ASN 23 ? A ASN 431 ? 1_555 80.6 ? 9 O ? A VAL 5 ? A VAL 413 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 OD1 ? A ASN 23 ? A ASN 431 ? 1_555 91.4 ? 10 OE1 ? A GLU 7 ? A GLU 415 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 OD1 ? A ASN 23 ? A ASN 431 ? 1_555 86.2 ? 11 OD1 ? A ASP 4 ? A ASP 412 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? A THR 24 ? A THR 432 ? 1_555 78.6 ? 12 OD2 ? A ASP 4 ? A ASP 412 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? A THR 24 ? A THR 432 ? 1_555 72.5 ? 13 O ? A VAL 5 ? A VAL 413 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? A THR 24 ? A THR 432 ? 1_555 145.1 ? 14 OE1 ? A GLU 7 ? A GLU 415 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? A THR 24 ? A THR 432 ? 1_555 142.2 ? 15 OD1 ? A ASN 23 ? A ASN 431 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? A THR 24 ? A THR 432 ? 1_555 79.1 ? 16 OD1 ? A ASP 4 ? A ASP 412 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? A SER 27 ? A SER 435 ? 1_555 130.6 ? 17 OD2 ? A ASP 4 ? A ASP 412 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? A SER 27 ? A SER 435 ? 1_555 144.2 ? 18 O ? A VAL 5 ? A VAL 413 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? A SER 27 ? A SER 435 ? 1_555 141.9 ? 19 OE1 ? A GLU 7 ? A GLU 415 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? A SER 27 ? A SER 435 ? 1_555 73.0 ? 20 OD1 ? A ASN 23 ? A ASN 431 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? A SER 27 ? A SER 435 ? 1_555 88.6 ? 21 O ? A THR 24 ? A THR 432 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? A SER 27 ? A SER 435 ? 1_555 72.0 ? 22 OD1 ? A ASP 4 ? A ASP 412 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? G HOH . ? A HOH 2004 ? 1_555 67.1 ? 23 OD2 ? A ASP 4 ? A ASP 412 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? G HOH . ? A HOH 2004 ? 1_555 109.1 ? 24 O ? A VAL 5 ? A VAL 413 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? G HOH . ? A HOH 2004 ? 1_555 83.3 ? 25 OE1 ? A GLU 7 ? A GLU 415 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? G HOH . ? A HOH 2004 ? 1_555 80.6 ? 26 OD1 ? A ASN 23 ? A ASN 431 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? G HOH . ? A HOH 2004 ? 1_555 166.8 ? 27 O ? A THR 24 ? A THR 432 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? G HOH . ? A HOH 2004 ? 1_555 112.0 ? 28 O ? A SER 27 ? A SER 435 ? 1_555 CA ? E CA . ? A CA 1533 ? 1_555 O ? G HOH . ? A HOH 2004 ? 1_555 88.2 ? 29 OD1 ? A ASP 44 ? A ASP 452 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 O ? A VAL 45 ? A VAL 453 ? 1_555 76.9 ? 30 OD1 ? A ASP 44 ? A ASP 452 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 OE1 ? A GLU 47 ? A GLU 455 ? 1_555 143.5 ? 31 O ? A VAL 45 ? A VAL 453 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 OE1 ? A GLU 47 ? A GLU 455 ? 1_555 77.2 ? 32 OD1 ? A ASP 44 ? A ASP 452 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 OD1 ? A ASP 61 ? A ASP 469 ? 1_555 128.0 ? 33 O ? A VAL 45 ? A VAL 453 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 OD1 ? A ASP 61 ? A ASP 469 ? 1_555 86.5 ? 34 OE1 ? A GLU 47 ? A GLU 455 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 OD1 ? A ASP 61 ? A ASP 469 ? 1_555 75.2 ? 35 OD1 ? A ASP 44 ? A ASP 452 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 O ? A GLN 62 ? A GLN 470 ? 1_555 123.3 ? 36 O ? A VAL 45 ? A VAL 453 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 O ? A GLN 62 ? A GLN 470 ? 1_555 149.2 ? 37 OE1 ? A GLU 47 ? A GLU 455 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 O ? A GLN 62 ? A GLN 470 ? 1_555 73.6 ? 38 OD1 ? A ASP 61 ? A ASP 469 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 O ? A GLN 62 ? A GLN 470 ? 1_555 95.3 ? 39 OD1 ? A ASP 44 ? A ASP 452 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 O ? G HOH . ? A HOH 2012 ? 1_555 74.7 ? 40 O ? A VAL 45 ? A VAL 453 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 O ? G HOH . ? A HOH 2012 ? 1_555 86.4 ? 41 OE1 ? A GLU 47 ? A GLU 455 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 O ? G HOH . ? A HOH 2012 ? 1_555 78.3 ? 42 OD1 ? A ASP 61 ? A ASP 469 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 O ? G HOH . ? A HOH 2012 ? 1_555 153.5 ? 43 O ? A GLN 62 ? A GLN 470 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 O ? G HOH . ? A HOH 2012 ? 1_555 78.3 ? 44 OD1 ? A ASP 44 ? A ASP 452 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 O ? G HOH . ? A HOH 2015 ? 1_555 76.0 ? 45 O ? A VAL 45 ? A VAL 453 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 O ? G HOH . ? A HOH 2015 ? 1_555 132.2 ? 46 OE1 ? A GLU 47 ? A GLU 455 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 O ? G HOH . ? A HOH 2015 ? 1_555 140.2 ? 47 OD1 ? A ASP 61 ? A ASP 469 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 O ? G HOH . ? A HOH 2015 ? 1_555 80.2 ? 48 O ? A GLN 62 ? A GLN 470 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 O ? G HOH . ? A HOH 2015 ? 1_555 78.2 ? 49 O ? G HOH . ? A HOH 2012 ? 1_555 CA ? C CA . ? A CA 1531 ? 1_555 O ? G HOH . ? A HOH 2015 ? 1_555 122.5 ? 50 OD1 ? A ASN 82 ? A ASN 490 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 O ? A THR 83 ? A THR 491 ? 1_555 85.1 ? 51 OD1 ? A ASN 82 ? A ASN 490 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 OE1 ? A GLU 85 ? A GLU 493 ? 1_555 152.8 ? 52 O ? A THR 83 ? A THR 491 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 OE1 ? A GLU 85 ? A GLU 493 ? 1_555 84.2 ? 53 OD1 ? A ASN 82 ? A ASN 490 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 OD1 ? A ASP 99 ? A ASP 507 ? 1_555 133.3 ? 54 O ? A THR 83 ? A THR 491 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 OD1 ? A ASP 99 ? A ASP 507 ? 1_555 86.2 ? 55 OE1 ? A GLU 85 ? A GLU 493 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 OD1 ? A ASP 99 ? A ASP 507 ? 1_555 70.7 ? 56 OD1 ? A ASN 82 ? A ASN 490 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 OD2 ? A ASP 99 ? A ASP 507 ? 1_555 85.2 ? 57 O ? A THR 83 ? A THR 491 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 OD2 ? A ASP 99 ? A ASP 507 ? 1_555 98.4 ? 58 OE1 ? A GLU 85 ? A GLU 493 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 OD2 ? A ASP 99 ? A ASP 507 ? 1_555 121.1 ? 59 OD1 ? A ASP 99 ? A ASP 507 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 OD2 ? A ASP 99 ? A ASP 507 ? 1_555 51.0 ? 60 OD1 ? A ASN 82 ? A ASN 490 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 O ? A LYS 100 ? A LYS 508 ? 1_555 103.6 ? 61 O ? A THR 83 ? A THR 491 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 O ? A LYS 100 ? A LYS 508 ? 1_555 168.3 ? 62 OE1 ? A GLU 85 ? A GLU 493 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 O ? A LYS 100 ? A LYS 508 ? 1_555 84.5 ? 63 OD1 ? A ASP 99 ? A ASP 507 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 O ? A LYS 100 ? A LYS 508 ? 1_555 93.2 ? 64 OD2 ? A ASP 99 ? A ASP 507 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 O ? A LYS 100 ? A LYS 508 ? 1_555 90.2 ? 65 OD1 ? A ASN 82 ? A ASN 490 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 O ? G HOH . ? A HOH 2032 ? 1_555 79.7 ? 66 O ? A THR 83 ? A THR 491 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 O ? G HOH . ? A HOH 2032 ? 1_555 84.2 ? 67 OE1 ? A GLU 85 ? A GLU 493 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 O ? G HOH . ? A HOH 2032 ? 1_555 74.4 ? 68 OD1 ? A ASP 99 ? A ASP 507 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 O ? G HOH . ? A HOH 2032 ? 1_555 144.6 ? 69 OD2 ? A ASP 99 ? A ASP 507 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 O ? G HOH . ? A HOH 2032 ? 1_555 164.4 ? 70 O ? A LYS 100 ? A LYS 508 ? 1_555 CA ? D CA . ? A CA 1532 ? 1_555 O ? G HOH . ? A HOH 2032 ? 1_555 89.7 ? 71 OE2 ? A GLU 103 ? A GLU 511 ? 1_555 CA ? F CA . ? A CA 1534 ? 1_555 OE2 ? A GLU 103 ? A GLU 511 ? 4_645 134.9 ? 72 OE2 ? A GLU 103 ? A GLU 511 ? 1_555 CA ? F CA . ? A CA 1534 ? 1_555 OE1 ? A GLU 103 ? A GLU 511 ? 4_645 93.6 ? 73 OE2 ? A GLU 103 ? A GLU 511 ? 4_645 CA ? F CA . ? A CA 1534 ? 1_555 OE1 ? A GLU 103 ? A GLU 511 ? 4_645 44.2 ? 74 OE2 ? A GLU 103 ? A GLU 511 ? 1_555 CA ? F CA . ? A CA 1534 ? 1_555 OE1 ? A GLU 103 ? A GLU 511 ? 1_555 44.2 ? 75 OE2 ? A GLU 103 ? A GLU 511 ? 4_645 CA ? F CA . ? A CA 1534 ? 1_555 OE1 ? A GLU 103 ? A GLU 511 ? 1_555 93.6 ? 76 OE1 ? A GLU 103 ? A GLU 511 ? 4_645 CA ? F CA . ? A CA 1534 ? 1_555 OE1 ? A GLU 103 ? A GLU 511 ? 1_555 62.9 ? 77 OE2 ? A GLU 103 ? A GLU 511 ? 1_555 CA ? F CA . ? A CA 1534 ? 1_555 NE2 ? A HIS 115 ? A HIS 523 ? 1_555 97.4 ? 78 OE2 ? A GLU 103 ? A GLU 511 ? 4_645 CA ? F CA . ? A CA 1534 ? 1_555 NE2 ? A HIS 115 ? A HIS 523 ? 1_555 95.2 ? 79 OE1 ? A GLU 103 ? A GLU 511 ? 4_645 CA ? F CA . ? A CA 1534 ? 1_555 NE2 ? A HIS 115 ? A HIS 523 ? 1_555 86.6 ? 80 OE1 ? A GLU 103 ? A GLU 511 ? 1_555 CA ? F CA . ? A CA 1534 ? 1_555 NE2 ? A HIS 115 ? A HIS 523 ? 1_555 123.1 ? 81 OE2 ? A GLU 103 ? A GLU 511 ? 1_555 CA ? F CA . ? A CA 1534 ? 1_555 NE2 ? A HIS 115 ? A HIS 523 ? 4_645 95.2 ? 82 OE2 ? A GLU 103 ? A GLU 511 ? 4_645 CA ? F CA . ? A CA 1534 ? 1_555 NE2 ? A HIS 115 ? A HIS 523 ? 4_645 97.4 ? 83 OE1 ? A GLU 103 ? A GLU 511 ? 4_645 CA ? F CA . ? A CA 1534 ? 1_555 NE2 ? A HIS 115 ? A HIS 523 ? 4_645 123.0 ? 84 OE1 ? A GLU 103 ? A GLU 511 ? 1_555 CA ? F CA . ? A CA 1534 ? 1_555 NE2 ? A HIS 115 ? A HIS 523 ? 4_645 86.6 ? 85 NE2 ? A HIS 115 ? A HIS 523 ? 1_555 CA ? F CA . ? A CA 1534 ? 1_555 NE2 ? A HIS 115 ? A HIS 523 ? 4_645 146.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-05-21 2 'Structure model' 1 1 2014-06-04 3 'Structure model' 1 2 2018-02-07 4 'Structure model' 1 3 2020-07-29 5 'Structure model' 1 4 2023-12-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' Other 6 4 'Structure model' 'Structure summary' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Refinement description' 10 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' audit_author 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' pdbx_chem_comp_identifier 5 4 'Structure model' pdbx_database_status 6 4 'Structure model' pdbx_entity_nonpoly 7 4 'Structure model' pdbx_struct_conn_angle 8 4 'Structure model' struct_conn 9 4 'Structure model' struct_site 10 4 'Structure model' struct_site_gen 11 5 'Structure model' chem_comp 12 5 'Structure model' chem_comp_atom 13 5 'Structure model' chem_comp_bond 14 5 'Structure model' database_2 15 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_audit_author.name' 2 4 'Structure model' '_chem_comp.name' 3 4 'Structure model' '_chem_comp.type' 4 4 'Structure model' '_entity.pdbx_description' 5 4 'Structure model' '_pdbx_database_status.status_code_sf' 6 4 'Structure model' '_pdbx_entity_nonpoly.name' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 23 4 'Structure model' '_pdbx_struct_conn_angle.value' 24 4 'Structure model' '_struct_conn.pdbx_dist_value' 25 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 26 4 'Structure model' '_struct_conn.pdbx_role' 27 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 28 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 32 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 33 4 'Structure model' '_struct_conn.ptnr1_symmetry' 34 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 35 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 39 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 40 4 'Structure model' '_struct_conn.ptnr2_symmetry' 41 5 'Structure model' '_chem_comp.pdbx_synonyms' 42 5 'Structure model' '_database_2.pdbx_DOI' 43 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.6.0117 ? 1 xia2 'data reduction' . ? 2 xia2 'data scaling' . ? 3 REFMAC phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 435 ? ? -149.78 -151.16 2 1 LYS A 508 ? ? -129.28 -162.62 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 409 ? A SER 1 2 1 Y 1 A ALA 410 ? A ALA 2 3 1 Y 1 A GLN 411 ? A GLN 3 4 1 Y 1 A ASP 534 ? A ASP 126 5 1 Y 1 A ALA 535 ? A ALA 127 6 1 Y 1 A GLN 536 ? A GLN 128 7 1 Y 1 A LYS 537 ? A LYS 129 8 1 Y 1 A MET 538 ? A MET 130 9 1 Y 1 A VAL 539 ? A VAL 131 10 1 Y 1 A TRP 540 ? A TRP 132 11 1 Y 1 A ASN 541 ? A ASN 133 12 1 Y 1 A HIS 542 ? A HIS 134 13 1 Y 1 A ARG 543 ? A ARG 135 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 FUC C1 C N R 89 FUC C2 C N S 90 FUC C3 C N R 91 FUC C4 C N S 92 FUC C5 C N S 93 FUC C6 C N N 94 FUC O1 O N N 95 FUC O2 O N N 96 FUC O3 O N N 97 FUC O4 O N N 98 FUC O5 O N N 99 FUC H1 H N N 100 FUC H2 H N N 101 FUC H3 H N N 102 FUC H4 H N N 103 FUC H5 H N N 104 FUC H61 H N N 105 FUC H62 H N N 106 FUC H63 H N N 107 FUC HO1 H N N 108 FUC HO2 H N N 109 FUC HO3 H N N 110 FUC HO4 H N N 111 GLN N N N N 112 GLN CA C N S 113 GLN C C N N 114 GLN O O N N 115 GLN CB C N N 116 GLN CG C N N 117 GLN CD C N N 118 GLN OE1 O N N 119 GLN NE2 N N N 120 GLN OXT O N N 121 GLN H H N N 122 GLN H2 H N N 123 GLN HA H N N 124 GLN HB2 H N N 125 GLN HB3 H N N 126 GLN HG2 H N N 127 GLN HG3 H N N 128 GLN HE21 H N N 129 GLN HE22 H N N 130 GLN HXT H N N 131 GLU N N N N 132 GLU CA C N S 133 GLU C C N N 134 GLU O O N N 135 GLU CB C N N 136 GLU CG C N N 137 GLU CD C N N 138 GLU OE1 O N N 139 GLU OE2 O N N 140 GLU OXT O N N 141 GLU H H N N 142 GLU H2 H N N 143 GLU HA H N N 144 GLU HB2 H N N 145 GLU HB3 H N N 146 GLU HG2 H N N 147 GLU HG3 H N N 148 GLU HE2 H N N 149 GLU HXT H N N 150 GLY N N N N 151 GLY CA C N N 152 GLY C C N N 153 GLY O O N N 154 GLY OXT O N N 155 GLY H H N N 156 GLY H2 H N N 157 GLY HA2 H N N 158 GLY HA3 H N N 159 GLY HXT H N N 160 HIS N N N N 161 HIS CA C N S 162 HIS C C N N 163 HIS O O N N 164 HIS CB C N N 165 HIS CG C Y N 166 HIS ND1 N Y N 167 HIS CD2 C Y N 168 HIS CE1 C Y N 169 HIS NE2 N Y N 170 HIS OXT O N N 171 HIS H H N N 172 HIS H2 H N N 173 HIS HA H N N 174 HIS HB2 H N N 175 HIS HB3 H N N 176 HIS HD1 H N N 177 HIS HD2 H N N 178 HIS HE1 H N N 179 HIS HE2 H N N 180 HIS HXT H N N 181 HOH O O N N 182 HOH H1 H N N 183 HOH H2 H N N 184 ILE N N N N 185 ILE CA C N S 186 ILE C C N N 187 ILE O O N N 188 ILE CB C N S 189 ILE CG1 C N N 190 ILE CG2 C N N 191 ILE CD1 C N N 192 ILE OXT O N N 193 ILE H H N N 194 ILE H2 H N N 195 ILE HA H N N 196 ILE HB H N N 197 ILE HG12 H N N 198 ILE HG13 H N N 199 ILE HG21 H N N 200 ILE HG22 H N N 201 ILE HG23 H N N 202 ILE HD11 H N N 203 ILE HD12 H N N 204 ILE HD13 H N N 205 ILE HXT H N N 206 LEU N N N N 207 LEU CA C N S 208 LEU C C N N 209 LEU O O N N 210 LEU CB C N N 211 LEU CG C N N 212 LEU CD1 C N N 213 LEU CD2 C N N 214 LEU OXT O N N 215 LEU H H N N 216 LEU H2 H N N 217 LEU HA H N N 218 LEU HB2 H N N 219 LEU HB3 H N N 220 LEU HG H N N 221 LEU HD11 H N N 222 LEU HD12 H N N 223 LEU HD13 H N N 224 LEU HD21 H N N 225 LEU HD22 H N N 226 LEU HD23 H N N 227 LEU HXT H N N 228 LYS N N N N 229 LYS CA C N S 230 LYS C C N N 231 LYS O O N N 232 LYS CB C N N 233 LYS CG C N N 234 LYS CD C N N 235 LYS CE C N N 236 LYS NZ N N N 237 LYS OXT O N N 238 LYS H H N N 239 LYS H2 H N N 240 LYS HA H N N 241 LYS HB2 H N N 242 LYS HB3 H N N 243 LYS HG2 H N N 244 LYS HG3 H N N 245 LYS HD2 H N N 246 LYS HD3 H N N 247 LYS HE2 H N N 248 LYS HE3 H N N 249 LYS HZ1 H N N 250 LYS HZ2 H N N 251 LYS HZ3 H N N 252 LYS HXT H N N 253 MET N N N N 254 MET CA C N S 255 MET C C N N 256 MET O O N N 257 MET CB C N N 258 MET CG C N N 259 MET SD S N N 260 MET CE C N N 261 MET OXT O N N 262 MET H H N N 263 MET H2 H N N 264 MET HA H N N 265 MET HB2 H N N 266 MET HB3 H N N 267 MET HG2 H N N 268 MET HG3 H N N 269 MET HE1 H N N 270 MET HE2 H N N 271 MET HE3 H N N 272 MET HXT H N N 273 PHE N N N N 274 PHE CA C N S 275 PHE C C N N 276 PHE O O N N 277 PHE CB C N N 278 PHE CG C Y N 279 PHE CD1 C Y N 280 PHE CD2 C Y N 281 PHE CE1 C Y N 282 PHE CE2 C Y N 283 PHE CZ C Y N 284 PHE OXT O N N 285 PHE H H N N 286 PHE H2 H N N 287 PHE HA H N N 288 PHE HB2 H N N 289 PHE HB3 H N N 290 PHE HD1 H N N 291 PHE HD2 H N N 292 PHE HE1 H N N 293 PHE HE2 H N N 294 PHE HZ H N N 295 PHE HXT H N N 296 PRO N N N N 297 PRO CA C N S 298 PRO C C N N 299 PRO O O N N 300 PRO CB C N N 301 PRO CG C N N 302 PRO CD C N N 303 PRO OXT O N N 304 PRO H H N N 305 PRO HA H N N 306 PRO HB2 H N N 307 PRO HB3 H N N 308 PRO HG2 H N N 309 PRO HG3 H N N 310 PRO HD2 H N N 311 PRO HD3 H N N 312 PRO HXT H N N 313 SER N N N N 314 SER CA C N S 315 SER C C N N 316 SER O O N N 317 SER CB C N N 318 SER OG O N N 319 SER OXT O N N 320 SER H H N N 321 SER H2 H N N 322 SER HA H N N 323 SER HB2 H N N 324 SER HB3 H N N 325 SER HG H N N 326 SER HXT H N N 327 THR N N N N 328 THR CA C N S 329 THR C C N N 330 THR O O N N 331 THR CB C N R 332 THR OG1 O N N 333 THR CG2 C N N 334 THR OXT O N N 335 THR H H N N 336 THR H2 H N N 337 THR HA H N N 338 THR HB H N N 339 THR HG1 H N N 340 THR HG21 H N N 341 THR HG22 H N N 342 THR HG23 H N N 343 THR HXT H N N 344 TRP N N N N 345 TRP CA C N S 346 TRP C C N N 347 TRP O O N N 348 TRP CB C N N 349 TRP CG C Y N 350 TRP CD1 C Y N 351 TRP CD2 C Y N 352 TRP NE1 N Y N 353 TRP CE2 C Y N 354 TRP CE3 C Y N 355 TRP CZ2 C Y N 356 TRP CZ3 C Y N 357 TRP CH2 C Y N 358 TRP OXT O N N 359 TRP H H N N 360 TRP H2 H N N 361 TRP HA H N N 362 TRP HB2 H N N 363 TRP HB3 H N N 364 TRP HD1 H N N 365 TRP HE1 H N N 366 TRP HE3 H N N 367 TRP HZ2 H N N 368 TRP HZ3 H N N 369 TRP HH2 H N N 370 TRP HXT H N N 371 TYR N N N N 372 TYR CA C N S 373 TYR C C N N 374 TYR O O N N 375 TYR CB C N N 376 TYR CG C Y N 377 TYR CD1 C Y N 378 TYR CD2 C Y N 379 TYR CE1 C Y N 380 TYR CE2 C Y N 381 TYR CZ C Y N 382 TYR OH O N N 383 TYR OXT O N N 384 TYR H H N N 385 TYR H2 H N N 386 TYR HA H N N 387 TYR HB2 H N N 388 TYR HB3 H N N 389 TYR HD1 H N N 390 TYR HD2 H N N 391 TYR HE1 H N N 392 TYR HE2 H N N 393 TYR HH H N N 394 TYR HXT H N N 395 VAL N N N N 396 VAL CA C N S 397 VAL C C N N 398 VAL O O N N 399 VAL CB C N N 400 VAL CG1 C N N 401 VAL CG2 C N N 402 VAL OXT O N N 403 VAL H H N N 404 VAL H2 H N N 405 VAL HA H N N 406 VAL HB H N N 407 VAL HG11 H N N 408 VAL HG12 H N N 409 VAL HG13 H N N 410 VAL HG21 H N N 411 VAL HG22 H N N 412 VAL HG23 H N N 413 VAL HXT H N N 414 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 FUC C1 C2 sing N N 83 FUC C1 O1 sing N N 84 FUC C1 O5 sing N N 85 FUC C1 H1 sing N N 86 FUC C2 C3 sing N N 87 FUC C2 O2 sing N N 88 FUC C2 H2 sing N N 89 FUC C3 C4 sing N N 90 FUC C3 O3 sing N N 91 FUC C3 H3 sing N N 92 FUC C4 C5 sing N N 93 FUC C4 O4 sing N N 94 FUC C4 H4 sing N N 95 FUC C5 C6 sing N N 96 FUC C5 O5 sing N N 97 FUC C5 H5 sing N N 98 FUC C6 H61 sing N N 99 FUC C6 H62 sing N N 100 FUC C6 H63 sing N N 101 FUC O1 HO1 sing N N 102 FUC O2 HO2 sing N N 103 FUC O3 HO3 sing N N 104 FUC O4 HO4 sing N N 105 GLN N CA sing N N 106 GLN N H sing N N 107 GLN N H2 sing N N 108 GLN CA C sing N N 109 GLN CA CB sing N N 110 GLN CA HA sing N N 111 GLN C O doub N N 112 GLN C OXT sing N N 113 GLN CB CG sing N N 114 GLN CB HB2 sing N N 115 GLN CB HB3 sing N N 116 GLN CG CD sing N N 117 GLN CG HG2 sing N N 118 GLN CG HG3 sing N N 119 GLN CD OE1 doub N N 120 GLN CD NE2 sing N N 121 GLN NE2 HE21 sing N N 122 GLN NE2 HE22 sing N N 123 GLN OXT HXT sing N N 124 GLU N CA sing N N 125 GLU N H sing N N 126 GLU N H2 sing N N 127 GLU CA C sing N N 128 GLU CA CB sing N N 129 GLU CA HA sing N N 130 GLU C O doub N N 131 GLU C OXT sing N N 132 GLU CB CG sing N N 133 GLU CB HB2 sing N N 134 GLU CB HB3 sing N N 135 GLU CG CD sing N N 136 GLU CG HG2 sing N N 137 GLU CG HG3 sing N N 138 GLU CD OE1 doub N N 139 GLU CD OE2 sing N N 140 GLU OE2 HE2 sing N N 141 GLU OXT HXT sing N N 142 GLY N CA sing N N 143 GLY N H sing N N 144 GLY N H2 sing N N 145 GLY CA C sing N N 146 GLY CA HA2 sing N N 147 GLY CA HA3 sing N N 148 GLY C O doub N N 149 GLY C OXT sing N N 150 GLY OXT HXT sing N N 151 HIS N CA sing N N 152 HIS N H sing N N 153 HIS N H2 sing N N 154 HIS CA C sing N N 155 HIS CA CB sing N N 156 HIS CA HA sing N N 157 HIS C O doub N N 158 HIS C OXT sing N N 159 HIS CB CG sing N N 160 HIS CB HB2 sing N N 161 HIS CB HB3 sing N N 162 HIS CG ND1 sing Y N 163 HIS CG CD2 doub Y N 164 HIS ND1 CE1 doub Y N 165 HIS ND1 HD1 sing N N 166 HIS CD2 NE2 sing Y N 167 HIS CD2 HD2 sing N N 168 HIS CE1 NE2 sing Y N 169 HIS CE1 HE1 sing N N 170 HIS NE2 HE2 sing N N 171 HIS OXT HXT sing N N 172 HOH O H1 sing N N 173 HOH O H2 sing N N 174 ILE N CA sing N N 175 ILE N H sing N N 176 ILE N H2 sing N N 177 ILE CA C sing N N 178 ILE CA CB sing N N 179 ILE CA HA sing N N 180 ILE C O doub N N 181 ILE C OXT sing N N 182 ILE CB CG1 sing N N 183 ILE CB CG2 sing N N 184 ILE CB HB sing N N 185 ILE CG1 CD1 sing N N 186 ILE CG1 HG12 sing N N 187 ILE CG1 HG13 sing N N 188 ILE CG2 HG21 sing N N 189 ILE CG2 HG22 sing N N 190 ILE CG2 HG23 sing N N 191 ILE CD1 HD11 sing N N 192 ILE CD1 HD12 sing N N 193 ILE CD1 HD13 sing N N 194 ILE OXT HXT sing N N 195 LEU N CA sing N N 196 LEU N H sing N N 197 LEU N H2 sing N N 198 LEU CA C sing N N 199 LEU CA CB sing N N 200 LEU CA HA sing N N 201 LEU C O doub N N 202 LEU C OXT sing N N 203 LEU CB CG sing N N 204 LEU CB HB2 sing N N 205 LEU CB HB3 sing N N 206 LEU CG CD1 sing N N 207 LEU CG CD2 sing N N 208 LEU CG HG sing N N 209 LEU CD1 HD11 sing N N 210 LEU CD1 HD12 sing N N 211 LEU CD1 HD13 sing N N 212 LEU CD2 HD21 sing N N 213 LEU CD2 HD22 sing N N 214 LEU CD2 HD23 sing N N 215 LEU OXT HXT sing N N 216 LYS N CA sing N N 217 LYS N H sing N N 218 LYS N H2 sing N N 219 LYS CA C sing N N 220 LYS CA CB sing N N 221 LYS CA HA sing N N 222 LYS C O doub N N 223 LYS C OXT sing N N 224 LYS CB CG sing N N 225 LYS CB HB2 sing N N 226 LYS CB HB3 sing N N 227 LYS CG CD sing N N 228 LYS CG HG2 sing N N 229 LYS CG HG3 sing N N 230 LYS CD CE sing N N 231 LYS CD HD2 sing N N 232 LYS CD HD3 sing N N 233 LYS CE NZ sing N N 234 LYS CE HE2 sing N N 235 LYS CE HE3 sing N N 236 LYS NZ HZ1 sing N N 237 LYS NZ HZ2 sing N N 238 LYS NZ HZ3 sing N N 239 LYS OXT HXT sing N N 240 MET N CA sing N N 241 MET N H sing N N 242 MET N H2 sing N N 243 MET CA C sing N N 244 MET CA CB sing N N 245 MET CA HA sing N N 246 MET C O doub N N 247 MET C OXT sing N N 248 MET CB CG sing N N 249 MET CB HB2 sing N N 250 MET CB HB3 sing N N 251 MET CG SD sing N N 252 MET CG HG2 sing N N 253 MET CG HG3 sing N N 254 MET SD CE sing N N 255 MET CE HE1 sing N N 256 MET CE HE2 sing N N 257 MET CE HE3 sing N N 258 MET OXT HXT sing N N 259 PHE N CA sing N N 260 PHE N H sing N N 261 PHE N H2 sing N N 262 PHE CA C sing N N 263 PHE CA CB sing N N 264 PHE CA HA sing N N 265 PHE C O doub N N 266 PHE C OXT sing N N 267 PHE CB CG sing N N 268 PHE CB HB2 sing N N 269 PHE CB HB3 sing N N 270 PHE CG CD1 doub Y N 271 PHE CG CD2 sing Y N 272 PHE CD1 CE1 sing Y N 273 PHE CD1 HD1 sing N N 274 PHE CD2 CE2 doub Y N 275 PHE CD2 HD2 sing N N 276 PHE CE1 CZ doub Y N 277 PHE CE1 HE1 sing N N 278 PHE CE2 CZ sing Y N 279 PHE CE2 HE2 sing N N 280 PHE CZ HZ sing N N 281 PHE OXT HXT sing N N 282 PRO N CA sing N N 283 PRO N CD sing N N 284 PRO N H sing N N 285 PRO CA C sing N N 286 PRO CA CB sing N N 287 PRO CA HA sing N N 288 PRO C O doub N N 289 PRO C OXT sing N N 290 PRO CB CG sing N N 291 PRO CB HB2 sing N N 292 PRO CB HB3 sing N N 293 PRO CG CD sing N N 294 PRO CG HG2 sing N N 295 PRO CG HG3 sing N N 296 PRO CD HD2 sing N N 297 PRO CD HD3 sing N N 298 PRO OXT HXT sing N N 299 SER N CA sing N N 300 SER N H sing N N 301 SER N H2 sing N N 302 SER CA C sing N N 303 SER CA CB sing N N 304 SER CA HA sing N N 305 SER C O doub N N 306 SER C OXT sing N N 307 SER CB OG sing N N 308 SER CB HB2 sing N N 309 SER CB HB3 sing N N 310 SER OG HG sing N N 311 SER OXT HXT sing N N 312 THR N CA sing N N 313 THR N H sing N N 314 THR N H2 sing N N 315 THR CA C sing N N 316 THR CA CB sing N N 317 THR CA HA sing N N 318 THR C O doub N N 319 THR C OXT sing N N 320 THR CB OG1 sing N N 321 THR CB CG2 sing N N 322 THR CB HB sing N N 323 THR OG1 HG1 sing N N 324 THR CG2 HG21 sing N N 325 THR CG2 HG22 sing N N 326 THR CG2 HG23 sing N N 327 THR OXT HXT sing N N 328 TRP N CA sing N N 329 TRP N H sing N N 330 TRP N H2 sing N N 331 TRP CA C sing N N 332 TRP CA CB sing N N 333 TRP CA HA sing N N 334 TRP C O doub N N 335 TRP C OXT sing N N 336 TRP CB CG sing N N 337 TRP CB HB2 sing N N 338 TRP CB HB3 sing N N 339 TRP CG CD1 doub Y N 340 TRP CG CD2 sing Y N 341 TRP CD1 NE1 sing Y N 342 TRP CD1 HD1 sing N N 343 TRP CD2 CE2 doub Y N 344 TRP CD2 CE3 sing Y N 345 TRP NE1 CE2 sing Y N 346 TRP NE1 HE1 sing N N 347 TRP CE2 CZ2 sing Y N 348 TRP CE3 CZ3 doub Y N 349 TRP CE3 HE3 sing N N 350 TRP CZ2 CH2 doub Y N 351 TRP CZ2 HZ2 sing N N 352 TRP CZ3 CH2 sing Y N 353 TRP CZ3 HZ3 sing N N 354 TRP CH2 HH2 sing N N 355 TRP OXT HXT sing N N 356 TYR N CA sing N N 357 TYR N H sing N N 358 TYR N H2 sing N N 359 TYR CA C sing N N 360 TYR CA CB sing N N 361 TYR CA HA sing N N 362 TYR C O doub N N 363 TYR C OXT sing N N 364 TYR CB CG sing N N 365 TYR CB HB2 sing N N 366 TYR CB HB3 sing N N 367 TYR CG CD1 doub Y N 368 TYR CG CD2 sing Y N 369 TYR CD1 CE1 sing Y N 370 TYR CD1 HD1 sing N N 371 TYR CD2 CE2 doub Y N 372 TYR CD2 HD2 sing N N 373 TYR CE1 CZ doub Y N 374 TYR CE1 HE1 sing N N 375 TYR CE2 CZ sing Y N 376 TYR CE2 HE2 sing N N 377 TYR CZ OH sing N N 378 TYR OH HH sing N N 379 TYR OXT HXT sing N N 380 VAL N CA sing N N 381 VAL N H sing N N 382 VAL N H2 sing N N 383 VAL CA C sing N N 384 VAL CA CB sing N N 385 VAL CA HA sing N N 386 VAL C O doub N N 387 VAL C OXT sing N N 388 VAL CB CG1 sing N N 389 VAL CB CG2 sing N N 390 VAL CB HB sing N N 391 VAL CG1 HG11 sing N N 392 VAL CG1 HG12 sing N N 393 VAL CG1 HG13 sing N N 394 VAL CG2 HG21 sing N N 395 VAL CG2 HG22 sing N N 396 VAL CG2 HG23 sing N N 397 VAL OXT HXT sing N N 398 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 alpha-L-fucopyranose FUC 3 'CALCIUM ION' CA 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2VJ3 _pdbx_initial_refinement_model.details 'PDB ENTRY 2VJ3' #