data_4CVM # _entry.id 4CVM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4CVM pdb_00004cvm 10.2210/pdb4cvm/pdb PDBE EBI-58872 ? ? WWPDB D_1290058872 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-04-22 2 'Structure model' 1 1 2020-07-29 3 'Structure model' 1 2 2024-05-08 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' Other 4 2 'Structure model' 'Structure summary' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp 2 2 'Structure model' entity 3 2 'Structure model' pdbx_chem_comp_identifier 4 2 'Structure model' pdbx_database_status 5 2 'Structure model' pdbx_entity_nonpoly 6 2 'Structure model' pdbx_struct_conn_angle 7 2 'Structure model' struct_conn 8 2 'Structure model' struct_site 9 2 'Structure model' struct_site_gen 10 3 'Structure model' chem_comp 11 3 'Structure model' chem_comp_atom 12 3 'Structure model' chem_comp_bond 13 3 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_chem_comp.name' 2 2 'Structure model' '_chem_comp.type' 3 2 'Structure model' '_entity.pdbx_description' 4 2 'Structure model' '_pdbx_database_status.status_code_sf' 5 2 'Structure model' '_pdbx_entity_nonpoly.name' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 2 'Structure model' '_pdbx_struct_conn_angle.value' 21 2 'Structure model' '_struct_conn.pdbx_dist_value' 22 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 23 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 30 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 33 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 34 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 35 3 'Structure model' '_chem_comp.pdbx_synonyms' 36 3 'Structure model' '_database_2.pdbx_DOI' 37 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4CVM _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-03-28 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4CVK unspecified 'PAMURF IN COMPLEX WITH UDP-MURNAC-TRIPEPTIDE (MDAP)' PDB 4CVL unspecified 'PAMURF IN COMPLEX WITH AMP-PNP' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ruane, K.M.' 1 'Majce, V.' 2 # _citation.id primary _citation.title 'Pamurf in Complex with AMP-Pnp and Udp-Murnac-Tripeptide' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Majce, V.' 1 ? primary 'Ruane, K.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D- ALANINE LIGASE' 49365.984 1 6.3.2.10 ? ? ? 2 non-polymer syn ALANINE 89.093 1 ? ? ? ? 3 non-polymer syn "URIDINE-5'-DIPHOSPHATE" 404.161 1 ? ? ? ? 4 non-polymer syn 'N-acetyl-alpha-muramic acid' 293.270 1 ? ? ? ? 5 non-polymer syn 'GAMMA-D-GLUTAMIC ACID' 147.129 1 ? ? ? ? 6 non-polymer syn 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 506.196 1 ? ? ? ? 7 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 8 water nat water 18.015 59 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MLEPLRLSQLTVALDARLIGEDAVFSAVSTDSRAIGPGELFIALSGPRFDGHDYLAEVAAKGAVAALVEREVADAPLPQL LVRDTRAALGRLGALNRRKFTGPLAAMTGSSGKTTVKEMLASILRTQAGDAESVLATRGNLNNDLGVPLTLLQLAPQHRS AVIELGASRIGEIAYTVELTRPHVAIITNAGTAHVGEFGGPEKIVEAKGEILEGLAADGTAVLNLDDKAFDTWKARASGR PLLTFSLDRPQADFRAADLQRDARGCMGFRLQGVAGEAQVQLNLLGRHNVANALAAAAAAHALGVPLDGIVAGLQALQPV KGRAVAQLTASGLRVIDDSYNANPASMLAAIDILSGFSGRTVLVLGDMGELGSWAEQAHREVGAYAAGKVSALYAVGPLM AHAVQAFGATGRHFADQASLIGALATEDPTTTILIKGSRSAAMDKVVAALCGSSEESHSSVDKLAAALEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MLEPLRLSQLTVALDARLIGEDAVFSAVSTDSRAIGPGELFIALSGPRFDGHDYLAEVAAKGAVAALVEREVADAPLPQL LVRDTRAALGRLGALNRRKFTGPLAAMTGSSGKTTVKEMLASILRTQAGDAESVLATRGNLNNDLGVPLTLLQLAPQHRS AVIELGASRIGEIAYTVELTRPHVAIITNAGTAHVGEFGGPEKIVEAKGEILEGLAADGTAVLNLDDKAFDTWKARASGR PLLTFSLDRPQADFRAADLQRDARGCMGFRLQGVAGEAQVQLNLLGRHNVANALAAAAAAHALGVPLDGIVAGLQALQPV KGRAVAQLTASGLRVIDDSYNANPASMLAAIDILSGFSGRTVLVLGDMGELGSWAEQAHREVGAYAAGKVSALYAVGPLM AHAVQAFGATGRHFADQASLIGALATEDPTTTILIKGSRSAAMDKVVAALCGSSEESHSSVDKLAAALEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ALANINE ALA 3 "URIDINE-5'-DIPHOSPHATE" UDP 4 'N-acetyl-alpha-muramic acid' MUB 5 'GAMMA-D-GLUTAMIC ACID' FGA 6 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' ANP 7 'MAGNESIUM ION' MG 8 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LEU n 1 3 GLU n 1 4 PRO n 1 5 LEU n 1 6 ARG n 1 7 LEU n 1 8 SER n 1 9 GLN n 1 10 LEU n 1 11 THR n 1 12 VAL n 1 13 ALA n 1 14 LEU n 1 15 ASP n 1 16 ALA n 1 17 ARG n 1 18 LEU n 1 19 ILE n 1 20 GLY n 1 21 GLU n 1 22 ASP n 1 23 ALA n 1 24 VAL n 1 25 PHE n 1 26 SER n 1 27 ALA n 1 28 VAL n 1 29 SER n 1 30 THR n 1 31 ASP n 1 32 SER n 1 33 ARG n 1 34 ALA n 1 35 ILE n 1 36 GLY n 1 37 PRO n 1 38 GLY n 1 39 GLU n 1 40 LEU n 1 41 PHE n 1 42 ILE n 1 43 ALA n 1 44 LEU n 1 45 SER n 1 46 GLY n 1 47 PRO n 1 48 ARG n 1 49 PHE n 1 50 ASP n 1 51 GLY n 1 52 HIS n 1 53 ASP n 1 54 TYR n 1 55 LEU n 1 56 ALA n 1 57 GLU n 1 58 VAL n 1 59 ALA n 1 60 ALA n 1 61 LYS n 1 62 GLY n 1 63 ALA n 1 64 VAL n 1 65 ALA n 1 66 ALA n 1 67 LEU n 1 68 VAL n 1 69 GLU n 1 70 ARG n 1 71 GLU n 1 72 VAL n 1 73 ALA n 1 74 ASP n 1 75 ALA n 1 76 PRO n 1 77 LEU n 1 78 PRO n 1 79 GLN n 1 80 LEU n 1 81 LEU n 1 82 VAL n 1 83 ARG n 1 84 ASP n 1 85 THR n 1 86 ARG n 1 87 ALA n 1 88 ALA n 1 89 LEU n 1 90 GLY n 1 91 ARG n 1 92 LEU n 1 93 GLY n 1 94 ALA n 1 95 LEU n 1 96 ASN n 1 97 ARG n 1 98 ARG n 1 99 LYS n 1 100 PHE n 1 101 THR n 1 102 GLY n 1 103 PRO n 1 104 LEU n 1 105 ALA n 1 106 ALA n 1 107 MET n 1 108 THR n 1 109 GLY n 1 110 SER n 1 111 SER n 1 112 GLY n 1 113 LYS n 1 114 THR n 1 115 THR n 1 116 VAL n 1 117 LYS n 1 118 GLU n 1 119 MET n 1 120 LEU n 1 121 ALA n 1 122 SER n 1 123 ILE n 1 124 LEU n 1 125 ARG n 1 126 THR n 1 127 GLN n 1 128 ALA n 1 129 GLY n 1 130 ASP n 1 131 ALA n 1 132 GLU n 1 133 SER n 1 134 VAL n 1 135 LEU n 1 136 ALA n 1 137 THR n 1 138 ARG n 1 139 GLY n 1 140 ASN n 1 141 LEU n 1 142 ASN n 1 143 ASN n 1 144 ASP n 1 145 LEU n 1 146 GLY n 1 147 VAL n 1 148 PRO n 1 149 LEU n 1 150 THR n 1 151 LEU n 1 152 LEU n 1 153 GLN n 1 154 LEU n 1 155 ALA n 1 156 PRO n 1 157 GLN n 1 158 HIS n 1 159 ARG n 1 160 SER n 1 161 ALA n 1 162 VAL n 1 163 ILE n 1 164 GLU n 1 165 LEU n 1 166 GLY n 1 167 ALA n 1 168 SER n 1 169 ARG n 1 170 ILE n 1 171 GLY n 1 172 GLU n 1 173 ILE n 1 174 ALA n 1 175 TYR n 1 176 THR n 1 177 VAL n 1 178 GLU n 1 179 LEU n 1 180 THR n 1 181 ARG n 1 182 PRO n 1 183 HIS n 1 184 VAL n 1 185 ALA n 1 186 ILE n 1 187 ILE n 1 188 THR n 1 189 ASN n 1 190 ALA n 1 191 GLY n 1 192 THR n 1 193 ALA n 1 194 HIS n 1 195 VAL n 1 196 GLY n 1 197 GLU n 1 198 PHE n 1 199 GLY n 1 200 GLY n 1 201 PRO n 1 202 GLU n 1 203 LYS n 1 204 ILE n 1 205 VAL n 1 206 GLU n 1 207 ALA n 1 208 LYS n 1 209 GLY n 1 210 GLU n 1 211 ILE n 1 212 LEU n 1 213 GLU n 1 214 GLY n 1 215 LEU n 1 216 ALA n 1 217 ALA n 1 218 ASP n 1 219 GLY n 1 220 THR n 1 221 ALA n 1 222 VAL n 1 223 LEU n 1 224 ASN n 1 225 LEU n 1 226 ASP n 1 227 ASP n 1 228 LYS n 1 229 ALA n 1 230 PHE n 1 231 ASP n 1 232 THR n 1 233 TRP n 1 234 LYS n 1 235 ALA n 1 236 ARG n 1 237 ALA n 1 238 SER n 1 239 GLY n 1 240 ARG n 1 241 PRO n 1 242 LEU n 1 243 LEU n 1 244 THR n 1 245 PHE n 1 246 SER n 1 247 LEU n 1 248 ASP n 1 249 ARG n 1 250 PRO n 1 251 GLN n 1 252 ALA n 1 253 ASP n 1 254 PHE n 1 255 ARG n 1 256 ALA n 1 257 ALA n 1 258 ASP n 1 259 LEU n 1 260 GLN n 1 261 ARG n 1 262 ASP n 1 263 ALA n 1 264 ARG n 1 265 GLY n 1 266 CYS n 1 267 MET n 1 268 GLY n 1 269 PHE n 1 270 ARG n 1 271 LEU n 1 272 GLN n 1 273 GLY n 1 274 VAL n 1 275 ALA n 1 276 GLY n 1 277 GLU n 1 278 ALA n 1 279 GLN n 1 280 VAL n 1 281 GLN n 1 282 LEU n 1 283 ASN n 1 284 LEU n 1 285 LEU n 1 286 GLY n 1 287 ARG n 1 288 HIS n 1 289 ASN n 1 290 VAL n 1 291 ALA n 1 292 ASN n 1 293 ALA n 1 294 LEU n 1 295 ALA n 1 296 ALA n 1 297 ALA n 1 298 ALA n 1 299 ALA n 1 300 ALA n 1 301 HIS n 1 302 ALA n 1 303 LEU n 1 304 GLY n 1 305 VAL n 1 306 PRO n 1 307 LEU n 1 308 ASP n 1 309 GLY n 1 310 ILE n 1 311 VAL n 1 312 ALA n 1 313 GLY n 1 314 LEU n 1 315 GLN n 1 316 ALA n 1 317 LEU n 1 318 GLN n 1 319 PRO n 1 320 VAL n 1 321 LYS n 1 322 GLY n 1 323 ARG n 1 324 ALA n 1 325 VAL n 1 326 ALA n 1 327 GLN n 1 328 LEU n 1 329 THR n 1 330 ALA n 1 331 SER n 1 332 GLY n 1 333 LEU n 1 334 ARG n 1 335 VAL n 1 336 ILE n 1 337 ASP n 1 338 ASP n 1 339 SER n 1 340 TYR n 1 341 ASN n 1 342 ALA n 1 343 ASN n 1 344 PRO n 1 345 ALA n 1 346 SER n 1 347 MET n 1 348 LEU n 1 349 ALA n 1 350 ALA n 1 351 ILE n 1 352 ASP n 1 353 ILE n 1 354 LEU n 1 355 SER n 1 356 GLY n 1 357 PHE n 1 358 SER n 1 359 GLY n 1 360 ARG n 1 361 THR n 1 362 VAL n 1 363 LEU n 1 364 VAL n 1 365 LEU n 1 366 GLY n 1 367 ASP n 1 368 MET n 1 369 GLY n 1 370 GLU n 1 371 LEU n 1 372 GLY n 1 373 SER n 1 374 TRP n 1 375 ALA n 1 376 GLU n 1 377 GLN n 1 378 ALA n 1 379 HIS n 1 380 ARG n 1 381 GLU n 1 382 VAL n 1 383 GLY n 1 384 ALA n 1 385 TYR n 1 386 ALA n 1 387 ALA n 1 388 GLY n 1 389 LYS n 1 390 VAL n 1 391 SER n 1 392 ALA n 1 393 LEU n 1 394 TYR n 1 395 ALA n 1 396 VAL n 1 397 GLY n 1 398 PRO n 1 399 LEU n 1 400 MET n 1 401 ALA n 1 402 HIS n 1 403 ALA n 1 404 VAL n 1 405 GLN n 1 406 ALA n 1 407 PHE n 1 408 GLY n 1 409 ALA n 1 410 THR n 1 411 GLY n 1 412 ARG n 1 413 HIS n 1 414 PHE n 1 415 ALA n 1 416 ASP n 1 417 GLN n 1 418 ALA n 1 419 SER n 1 420 LEU n 1 421 ILE n 1 422 GLY n 1 423 ALA n 1 424 LEU n 1 425 ALA n 1 426 THR n 1 427 GLU n 1 428 ASP n 1 429 PRO n 1 430 THR n 1 431 THR n 1 432 THR n 1 433 ILE n 1 434 LEU n 1 435 ILE n 1 436 LYS n 1 437 GLY n 1 438 SER n 1 439 ARG n 1 440 SER n 1 441 ALA n 1 442 ALA n 1 443 MET n 1 444 ASP n 1 445 LYS n 1 446 VAL n 1 447 VAL n 1 448 ALA n 1 449 ALA n 1 450 LEU n 1 451 CYS n 1 452 GLY n 1 453 SER n 1 454 SER n 1 455 GLU n 1 456 GLU n 1 457 SER n 1 458 HIS n 1 459 SER n 1 460 SER n 1 461 VAL n 1 462 ASP n 1 463 LYS n 1 464 LEU n 1 465 ALA n 1 466 ALA n 1 467 ALA n 1 468 LEU n 1 469 GLU n 1 470 HIS n 1 471 HIS n 1 472 HIS n 1 473 HIS n 1 474 HIS n 1 475 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'PSEUDOMONAS AERUGINOSA PAO1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 208964 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 15692 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ANP non-polymer . 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' ? 'C10 H17 N6 O12 P3' 506.196 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FGA 'D-gamma-peptide, C-delta linking' . 'GAMMA-D-GLUTAMIC ACID' 'D-GLUTAMIC ACID' 'C5 H9 N O4' 147.129 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MUB 'D-saccharide, alpha linking' . 'N-acetyl-alpha-muramic acid' 'N-acetyl-muramic acid; N-ACETYLMURAMIC ACID' 'C11 H19 N O8' 293.270 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UDP 'RNA linking' . "URIDINE-5'-DIPHOSPHATE" ? 'C9 H14 N2 O12 P2' 404.161 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MUB 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GlcpNAc3 MUB 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 MurNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 GLU 3 3 3 GLU GLU A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 GLN 9 9 9 GLN GLN A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 PHE 41 41 41 PHE PHE A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 HIS 52 52 52 HIS HIS A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 PRO 76 76 76 PRO PRO A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 PRO 78 78 78 PRO PRO A . n A 1 79 GLN 79 79 79 GLN GLN A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 ASP 84 84 84 ASP ASP A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 ARG 91 91 91 ARG ARG A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 ASN 96 96 96 ASN ASN A . n A 1 97 ARG 97 97 97 ARG ARG A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 PRO 103 103 103 PRO PRO A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 MET 107 107 107 MET MET A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 SER 111 111 111 SER SER A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 THR 114 114 114 THR THR A . n A 1 115 THR 115 115 115 THR THR A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 MET 119 119 119 MET MET A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 ILE 123 123 123 ILE ILE A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 THR 126 126 126 THR THR A . n A 1 127 GLN 127 127 127 GLN GLN A . n A 1 128 ALA 128 128 128 ALA ALA A . n A 1 129 GLY 129 129 129 GLY GLY A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 GLU 132 132 132 GLU GLU A . n A 1 133 SER 133 133 133 SER SER A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 THR 137 137 137 THR THR A . n A 1 138 ARG 138 138 138 ARG ARG A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 ASN 140 140 140 ASN ASN A . n A 1 141 LEU 141 141 141 LEU LEU A . n A 1 142 ASN 142 142 142 ASN ASN A . n A 1 143 ASN 143 143 143 ASN ASN A . n A 1 144 ASP 144 144 144 ASP ASP A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 GLY 146 146 146 GLY GLY A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 PRO 148 148 148 PRO PRO A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 THR 150 150 150 THR THR A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 GLN 153 153 153 GLN GLN A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 ALA 155 155 155 ALA ALA A . n A 1 156 PRO 156 156 156 PRO PRO A . n A 1 157 GLN 157 157 157 GLN GLN A . n A 1 158 HIS 158 158 158 HIS HIS A . n A 1 159 ARG 159 159 159 ARG ARG A . n A 1 160 SER 160 160 160 SER SER A . n A 1 161 ALA 161 161 161 ALA ALA A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 ILE 163 163 163 ILE ILE A . n A 1 164 GLU 164 164 164 GLU GLU A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 GLY 166 166 166 GLY GLY A . n A 1 167 ALA 167 167 167 ALA ALA A . n A 1 168 SER 168 168 168 SER SER A . n A 1 169 ARG 169 169 169 ARG ARG A . n A 1 170 ILE 170 170 170 ILE ILE A . n A 1 171 GLY 171 171 171 GLY GLY A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 ILE 173 173 173 ILE ILE A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 TYR 175 175 175 TYR TYR A . n A 1 176 THR 176 176 176 THR THR A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 GLU 178 178 178 GLU GLU A . n A 1 179 LEU 179 179 179 LEU LEU A . n A 1 180 THR 180 180 180 THR THR A . n A 1 181 ARG 181 181 181 ARG ARG A . n A 1 182 PRO 182 182 182 PRO PRO A . n A 1 183 HIS 183 183 183 HIS HIS A . n A 1 184 VAL 184 184 184 VAL VAL A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 ILE 186 186 186 ILE ILE A . n A 1 187 ILE 187 187 187 ILE ILE A . n A 1 188 THR 188 188 188 THR THR A . n A 1 189 ASN 189 189 189 ASN ASN A . n A 1 190 ALA 190 190 190 ALA ALA A . n A 1 191 GLY 191 191 191 GLY GLY A . n A 1 192 THR 192 192 192 THR THR A . n A 1 193 ALA 193 193 193 ALA ALA A . n A 1 194 HIS 194 194 194 HIS HIS A . n A 1 195 VAL 195 195 195 VAL VAL A . n A 1 196 GLY 196 196 ? ? ? A . n A 1 197 GLU 197 197 ? ? ? A . n A 1 198 PHE 198 198 ? ? ? A . n A 1 199 GLY 199 199 199 GLY GLY A . n A 1 200 GLY 200 200 200 GLY GLY A . n A 1 201 PRO 201 201 201 PRO PRO A . n A 1 202 GLU 202 202 202 GLU GLU A . n A 1 203 LYS 203 203 203 LYS LYS A . n A 1 204 ILE 204 204 204 ILE ILE A . n A 1 205 VAL 205 205 205 VAL VAL A . n A 1 206 GLU 206 206 206 GLU GLU A . n A 1 207 ALA 207 207 207 ALA ALA A . n A 1 208 LYS 208 208 208 LYS LYS A . n A 1 209 GLY 209 209 209 GLY GLY A . n A 1 210 GLU 210 210 210 GLU GLU A . n A 1 211 ILE 211 211 211 ILE ILE A . n A 1 212 LEU 212 212 212 LEU LEU A . n A 1 213 GLU 213 213 213 GLU GLU A . n A 1 214 GLY 214 214 214 GLY GLY A . n A 1 215 LEU 215 215 215 LEU LEU A . n A 1 216 ALA 216 216 216 ALA ALA A . n A 1 217 ALA 217 217 217 ALA ALA A . n A 1 218 ASP 218 218 218 ASP ASP A . n A 1 219 GLY 219 219 219 GLY GLY A . n A 1 220 THR 220 220 220 THR THR A . n A 1 221 ALA 221 221 221 ALA ALA A . n A 1 222 VAL 222 222 222 VAL VAL A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 ASN 224 224 224 ASN ASN A . n A 1 225 LEU 225 225 225 LEU LEU A . n A 1 226 ASP 226 226 226 ASP ASP A . n A 1 227 ASP 227 227 227 ASP ASP A . n A 1 228 LYS 228 228 228 LYS LYS A . n A 1 229 ALA 229 229 229 ALA ALA A . n A 1 230 PHE 230 230 230 PHE PHE A . n A 1 231 ASP 231 231 231 ASP ASP A . n A 1 232 THR 232 232 232 THR THR A . n A 1 233 TRP 233 233 233 TRP TRP A . n A 1 234 LYS 234 234 234 LYS LYS A . n A 1 235 ALA 235 235 235 ALA ALA A . n A 1 236 ARG 236 236 236 ARG ARG A . n A 1 237 ALA 237 237 237 ALA ALA A . n A 1 238 SER 238 238 238 SER SER A . n A 1 239 GLY 239 239 239 GLY GLY A . n A 1 240 ARG 240 240 240 ARG ARG A . n A 1 241 PRO 241 241 241 PRO PRO A . n A 1 242 LEU 242 242 242 LEU LEU A . n A 1 243 LEU 243 243 243 LEU LEU A . n A 1 244 THR 244 244 244 THR THR A . n A 1 245 PHE 245 245 245 PHE PHE A . n A 1 246 SER 246 246 246 SER SER A . n A 1 247 LEU 247 247 247 LEU LEU A . n A 1 248 ASP 248 248 248 ASP ASP A . n A 1 249 ARG 249 249 249 ARG ARG A . n A 1 250 PRO 250 250 250 PRO PRO A . n A 1 251 GLN 251 251 251 GLN GLN A . n A 1 252 ALA 252 252 252 ALA ALA A . n A 1 253 ASP 253 253 253 ASP ASP A . n A 1 254 PHE 254 254 254 PHE PHE A . n A 1 255 ARG 255 255 255 ARG ARG A . n A 1 256 ALA 256 256 256 ALA ALA A . n A 1 257 ALA 257 257 257 ALA ALA A . n A 1 258 ASP 258 258 258 ASP ASP A . n A 1 259 LEU 259 259 259 LEU LEU A . n A 1 260 GLN 260 260 260 GLN GLN A . n A 1 261 ARG 261 261 261 ARG ARG A . n A 1 262 ASP 262 262 262 ASP ASP A . n A 1 263 ALA 263 263 263 ALA ALA A . n A 1 264 ARG 264 264 264 ARG ARG A . n A 1 265 GLY 265 265 265 GLY GLY A . n A 1 266 CYS 266 266 266 CYS CYS A . n A 1 267 MET 267 267 267 MET MET A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 PHE 269 269 269 PHE PHE A . n A 1 270 ARG 270 270 270 ARG ARG A . n A 1 271 LEU 271 271 271 LEU LEU A . n A 1 272 GLN 272 272 272 GLN GLN A . n A 1 273 GLY 273 273 273 GLY GLY A . n A 1 274 VAL 274 274 274 VAL VAL A . n A 1 275 ALA 275 275 275 ALA ALA A . n A 1 276 GLY 276 276 276 GLY GLY A . n A 1 277 GLU 277 277 277 GLU GLU A . n A 1 278 ALA 278 278 278 ALA ALA A . n A 1 279 GLN 279 279 279 GLN GLN A . n A 1 280 VAL 280 280 280 VAL VAL A . n A 1 281 GLN 281 281 281 GLN GLN A . n A 1 282 LEU 282 282 282 LEU LEU A . n A 1 283 ASN 283 283 283 ASN ASN A . n A 1 284 LEU 284 284 284 LEU LEU A . n A 1 285 LEU 285 285 285 LEU LEU A . n A 1 286 GLY 286 286 286 GLY GLY A . n A 1 287 ARG 287 287 287 ARG ARG A . n A 1 288 HIS 288 288 288 HIS HIS A . n A 1 289 ASN 289 289 289 ASN ASN A . n A 1 290 VAL 290 290 290 VAL VAL A . n A 1 291 ALA 291 291 291 ALA ALA A . n A 1 292 ASN 292 292 292 ASN ASN A . n A 1 293 ALA 293 293 293 ALA ALA A . n A 1 294 LEU 294 294 294 LEU LEU A . n A 1 295 ALA 295 295 295 ALA ALA A . n A 1 296 ALA 296 296 296 ALA ALA A . n A 1 297 ALA 297 297 297 ALA ALA A . n A 1 298 ALA 298 298 298 ALA ALA A . n A 1 299 ALA 299 299 299 ALA ALA A . n A 1 300 ALA 300 300 300 ALA ALA A . n A 1 301 HIS 301 301 301 HIS HIS A . n A 1 302 ALA 302 302 302 ALA ALA A . n A 1 303 LEU 303 303 303 LEU LEU A . n A 1 304 GLY 304 304 304 GLY GLY A . n A 1 305 VAL 305 305 305 VAL VAL A . n A 1 306 PRO 306 306 306 PRO PRO A . n A 1 307 LEU 307 307 307 LEU LEU A . n A 1 308 ASP 308 308 308 ASP ASP A . n A 1 309 GLY 309 309 309 GLY GLY A . n A 1 310 ILE 310 310 310 ILE ILE A . n A 1 311 VAL 311 311 311 VAL VAL A . n A 1 312 ALA 312 312 312 ALA ALA A . n A 1 313 GLY 313 313 313 GLY GLY A . n A 1 314 LEU 314 314 314 LEU LEU A . n A 1 315 GLN 315 315 315 GLN GLN A . n A 1 316 ALA 316 316 316 ALA ALA A . n A 1 317 LEU 317 317 317 LEU LEU A . n A 1 318 GLN 318 318 318 GLN GLN A . n A 1 319 PRO 319 319 319 PRO PRO A . n A 1 320 VAL 320 320 320 VAL VAL A . n A 1 321 LYS 321 321 321 LYS LYS A . n A 1 322 GLY 322 322 322 GLY GLY A . n A 1 323 ARG 323 323 323 ARG ARG A . n A 1 324 ALA 324 324 324 ALA ALA A . n A 1 325 VAL 325 325 325 VAL VAL A . n A 1 326 ALA 326 326 326 ALA ALA A . n A 1 327 GLN 327 327 327 GLN GLN A . n A 1 328 LEU 328 328 328 LEU LEU A . n A 1 329 THR 329 329 329 THR THR A . n A 1 330 ALA 330 330 330 ALA ALA A . n A 1 331 SER 331 331 331 SER SER A . n A 1 332 GLY 332 332 332 GLY GLY A . n A 1 333 LEU 333 333 333 LEU LEU A . n A 1 334 ARG 334 334 334 ARG ARG A . n A 1 335 VAL 335 335 335 VAL VAL A . n A 1 336 ILE 336 336 336 ILE ILE A . n A 1 337 ASP 337 337 337 ASP ASP A . n A 1 338 ASP 338 338 338 ASP ASP A . n A 1 339 SER 339 339 339 SER SER A . n A 1 340 TYR 340 340 340 TYR TYR A . n A 1 341 ASN 341 341 341 ASN ASN A . n A 1 342 ALA 342 342 342 ALA ALA A . n A 1 343 ASN 343 343 343 ASN ASN A . n A 1 344 PRO 344 344 344 PRO PRO A . n A 1 345 ALA 345 345 345 ALA ALA A . n A 1 346 SER 346 346 346 SER SER A . n A 1 347 MET 347 347 347 MET MET A . n A 1 348 LEU 348 348 348 LEU LEU A . n A 1 349 ALA 349 349 349 ALA ALA A . n A 1 350 ALA 350 350 350 ALA ALA A . n A 1 351 ILE 351 351 351 ILE ILE A . n A 1 352 ASP 352 352 352 ASP ASP A . n A 1 353 ILE 353 353 353 ILE ILE A . n A 1 354 LEU 354 354 354 LEU LEU A . n A 1 355 SER 355 355 355 SER SER A . n A 1 356 GLY 356 356 356 GLY GLY A . n A 1 357 PHE 357 357 357 PHE PHE A . n A 1 358 SER 358 358 358 SER SER A . n A 1 359 GLY 359 359 359 GLY GLY A . n A 1 360 ARG 360 360 360 ARG ARG A . n A 1 361 THR 361 361 361 THR THR A . n A 1 362 VAL 362 362 362 VAL VAL A . n A 1 363 LEU 363 363 363 LEU LEU A . n A 1 364 VAL 364 364 364 VAL VAL A . n A 1 365 LEU 365 365 365 LEU LEU A . n A 1 366 GLY 366 366 366 GLY GLY A . n A 1 367 ASP 367 367 367 ASP ASP A . n A 1 368 MET 368 368 368 MET MET A . n A 1 369 GLY 369 369 369 GLY GLY A . n A 1 370 GLU 370 370 ? ? ? A . n A 1 371 LEU 371 371 ? ? ? A . n A 1 372 GLY 372 372 ? ? ? A . n A 1 373 SER 373 373 ? ? ? A . n A 1 374 TRP 374 374 ? ? ? A . n A 1 375 ALA 375 375 375 ALA ALA A . n A 1 376 GLU 376 376 376 GLU GLU A . n A 1 377 GLN 377 377 377 GLN GLN A . n A 1 378 ALA 378 378 378 ALA ALA A . n A 1 379 HIS 379 379 379 HIS HIS A . n A 1 380 ARG 380 380 380 ARG ARG A . n A 1 381 GLU 381 381 381 GLU GLU A . n A 1 382 VAL 382 382 382 VAL VAL A . n A 1 383 GLY 383 383 383 GLY GLY A . n A 1 384 ALA 384 384 384 ALA ALA A . n A 1 385 TYR 385 385 385 TYR TYR A . n A 1 386 ALA 386 386 386 ALA ALA A . n A 1 387 ALA 387 387 387 ALA ALA A . n A 1 388 GLY 388 388 388 GLY GLY A . n A 1 389 LYS 389 389 389 LYS LYS A . n A 1 390 VAL 390 390 390 VAL VAL A . n A 1 391 SER 391 391 391 SER SER A . n A 1 392 ALA 392 392 392 ALA ALA A . n A 1 393 LEU 393 393 393 LEU LEU A . n A 1 394 TYR 394 394 394 TYR TYR A . n A 1 395 ALA 395 395 395 ALA ALA A . n A 1 396 VAL 396 396 396 VAL VAL A . n A 1 397 GLY 397 397 397 GLY GLY A . n A 1 398 PRO 398 398 398 PRO PRO A . n A 1 399 LEU 399 399 399 LEU LEU A . n A 1 400 MET 400 400 400 MET MET A . n A 1 401 ALA 401 401 401 ALA ALA A . n A 1 402 HIS 402 402 402 HIS HIS A . n A 1 403 ALA 403 403 403 ALA ALA A . n A 1 404 VAL 404 404 404 VAL VAL A . n A 1 405 GLN 405 405 405 GLN GLN A . n A 1 406 ALA 406 406 406 ALA ALA A . n A 1 407 PHE 407 407 407 PHE PHE A . n A 1 408 GLY 408 408 408 GLY GLY A . n A 1 409 ALA 409 409 409 ALA ALA A . n A 1 410 THR 410 410 410 THR THR A . n A 1 411 GLY 411 411 411 GLY GLY A . n A 1 412 ARG 412 412 412 ARG ARG A . n A 1 413 HIS 413 413 413 HIS HIS A . n A 1 414 PHE 414 414 414 PHE PHE A . n A 1 415 ALA 415 415 415 ALA ALA A . n A 1 416 ASP 416 416 416 ASP ASP A . n A 1 417 GLN 417 417 417 GLN GLN A . n A 1 418 ALA 418 418 418 ALA ALA A . n A 1 419 SER 419 419 419 SER SER A . n A 1 420 LEU 420 420 420 LEU LEU A . n A 1 421 ILE 421 421 421 ILE ILE A . n A 1 422 GLY 422 422 422 GLY GLY A . n A 1 423 ALA 423 423 423 ALA ALA A . n A 1 424 LEU 424 424 424 LEU LEU A . n A 1 425 ALA 425 425 425 ALA ALA A . n A 1 426 THR 426 426 426 THR THR A . n A 1 427 GLU 427 427 427 GLU GLU A . n A 1 428 ASP 428 428 428 ASP ASP A . n A 1 429 PRO 429 429 429 PRO PRO A . n A 1 430 THR 430 430 430 THR THR A . n A 1 431 THR 431 431 431 THR THR A . n A 1 432 THR 432 432 432 THR THR A . n A 1 433 ILE 433 433 433 ILE ILE A . n A 1 434 LEU 434 434 434 LEU LEU A . n A 1 435 ILE 435 435 435 ILE ILE A . n A 1 436 LYS 436 436 436 LYS LYS A . n A 1 437 GLY 437 437 437 GLY GLY A . n A 1 438 SER 438 438 438 SER SER A . n A 1 439 ARG 439 439 439 ARG ARG A . n A 1 440 SER 440 440 440 SER SER A . n A 1 441 ALA 441 441 441 ALA ALA A . n A 1 442 ALA 442 442 442 ALA ALA A . n A 1 443 MET 443 443 443 MET MET A . n A 1 444 ASP 444 444 444 ASP ASP A . n A 1 445 LYS 445 445 445 LYS LYS A . n A 1 446 VAL 446 446 446 VAL VAL A . n A 1 447 VAL 447 447 447 VAL VAL A . n A 1 448 ALA 448 448 448 ALA ALA A . n A 1 449 ALA 449 449 449 ALA ALA A . n A 1 450 LEU 450 450 450 LEU LEU A . n A 1 451 CYS 451 451 451 CYS CYS A . n A 1 452 GLY 452 452 ? ? ? A . n A 1 453 SER 453 453 ? ? ? A . n A 1 454 SER 454 454 ? ? ? A . n A 1 455 GLU 455 455 ? ? ? A . n A 1 456 GLU 456 456 ? ? ? A . n A 1 457 SER 457 457 ? ? ? A . n A 1 458 HIS 458 458 ? ? ? A . n A 1 459 SER 459 459 ? ? ? A . n A 1 460 SER 460 460 ? ? ? A . n A 1 461 VAL 461 461 ? ? ? A . n A 1 462 ASP 462 462 ? ? ? A . n A 1 463 LYS 463 463 ? ? ? A . n A 1 464 LEU 464 464 ? ? ? A . n A 1 465 ALA 465 465 ? ? ? A . n A 1 466 ALA 466 466 ? ? ? A . n A 1 467 ALA 467 467 ? ? ? A . n A 1 468 LEU 468 468 ? ? ? A . n A 1 469 GLU 469 469 ? ? ? A . n A 1 470 HIS 470 470 ? ? ? A . n A 1 471 HIS 471 471 ? ? ? A . n A 1 472 HIS 472 472 ? ? ? A . n A 1 473 HIS 473 473 ? ? ? A . n A 1 474 HIS 474 474 ? ? ? A . n A 1 475 HIS 475 475 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ALA 1 1454 1454 ALA ALA A . C 3 UDP 1 1452 1452 UDP UDP A . D 4 MUB 1 1453 1453 MUB MUB A . E 5 FGA 1 1455 1455 FGA FGA A . F 6 ANP 1 1456 1456 ANP ANP A . G 7 MG 1 1457 1457 MG MG A . H 7 MG 1 1458 1458 MG MG A . I 8 HOH 1 2001 2001 HOH HOH A . I 8 HOH 2 2002 2002 HOH HOH A . I 8 HOH 3 2003 2003 HOH HOH A . I 8 HOH 4 2004 2004 HOH HOH A . I 8 HOH 5 2005 2005 HOH HOH A . I 8 HOH 6 2006 2006 HOH HOH A . I 8 HOH 7 2007 2007 HOH HOH A . I 8 HOH 8 2008 2008 HOH HOH A . I 8 HOH 9 2009 2009 HOH HOH A . I 8 HOH 10 2010 2010 HOH HOH A . I 8 HOH 11 2011 2011 HOH HOH A . I 8 HOH 12 2012 2012 HOH HOH A . I 8 HOH 13 2013 2013 HOH HOH A . I 8 HOH 14 2014 2014 HOH HOH A . I 8 HOH 15 2015 2015 HOH HOH A . I 8 HOH 16 2016 2016 HOH HOH A . I 8 HOH 17 2017 2017 HOH HOH A . I 8 HOH 18 2018 2018 HOH HOH A . I 8 HOH 19 2019 2019 HOH HOH A . I 8 HOH 20 2020 2020 HOH HOH A . I 8 HOH 21 2021 2021 HOH HOH A . I 8 HOH 22 2022 2022 HOH HOH A . I 8 HOH 23 2023 2023 HOH HOH A . I 8 HOH 24 2024 2024 HOH HOH A . I 8 HOH 25 2025 2025 HOH HOH A . I 8 HOH 26 2026 2026 HOH HOH A . I 8 HOH 27 2027 2027 HOH HOH A . I 8 HOH 28 2028 2028 HOH HOH A . I 8 HOH 29 2029 2029 HOH HOH A . I 8 HOH 30 2030 2030 HOH HOH A . I 8 HOH 31 2031 2031 HOH HOH A . I 8 HOH 32 2032 2032 HOH HOH A . I 8 HOH 33 2033 2033 HOH HOH A . I 8 HOH 34 2034 2034 HOH HOH A . I 8 HOH 35 2035 2035 HOH HOH A . I 8 HOH 36 2036 2036 HOH HOH A . I 8 HOH 37 2037 2037 HOH HOH A . I 8 HOH 38 2038 2038 HOH HOH A . I 8 HOH 39 2039 2039 HOH HOH A . I 8 HOH 40 2040 2040 HOH HOH A . I 8 HOH 41 2041 2041 HOH HOH A . I 8 HOH 42 2042 2042 HOH HOH A . I 8 HOH 43 2043 2043 HOH HOH A . I 8 HOH 44 2044 2044 HOH HOH A . I 8 HOH 45 2045 2045 HOH HOH A . I 8 HOH 46 2046 2046 HOH HOH A . I 8 HOH 47 2047 2047 HOH HOH A . I 8 HOH 48 2048 2048 HOH HOH A . I 8 HOH 49 2049 2049 HOH HOH A . I 8 HOH 50 2050 2050 HOH HOH A . I 8 HOH 51 2051 2051 HOH HOH A . I 8 HOH 52 2052 2052 HOH HOH A . I 8 HOH 53 2053 2053 HOH HOH A . I 8 HOH 54 2054 2054 HOH HOH A . I 8 HOH 55 2055 2055 HOH HOH A . I 8 HOH 56 2056 2056 HOH HOH A . I 8 HOH 57 2057 2057 HOH HOH A . I 8 HOH 58 2058 2058 HOH HOH A . I 8 HOH 59 2059 2059 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 48 ? CG ? A ARG 48 CG 2 1 Y 1 A ARG 48 ? CD ? A ARG 48 CD 3 1 Y 1 A ARG 48 ? NE ? A ARG 48 NE 4 1 Y 1 A ARG 48 ? CZ ? A ARG 48 CZ 5 1 Y 1 A ARG 48 ? NH1 ? A ARG 48 NH1 6 1 Y 1 A ARG 48 ? NH2 ? A ARG 48 NH2 7 1 Y 1 A ARG 83 ? CD ? A ARG 83 CD 8 1 Y 1 A ARG 83 ? NE ? A ARG 83 NE 9 1 Y 1 A ARG 83 ? CZ ? A ARG 83 CZ 10 1 Y 1 A ARG 83 ? NH1 ? A ARG 83 NH1 11 1 Y 1 A ARG 83 ? NH2 ? A ARG 83 NH2 12 1 Y 1 A ARG 138 ? CG ? A ARG 138 CG 13 1 Y 1 A ARG 138 ? CD ? A ARG 138 CD 14 1 Y 1 A ARG 138 ? NE ? A ARG 138 NE 15 1 Y 1 A ARG 138 ? CZ ? A ARG 138 CZ 16 1 Y 1 A ARG 138 ? NH1 ? A ARG 138 NH1 17 1 Y 1 A ARG 138 ? NH2 ? A ARG 138 NH2 18 1 Y 1 A LYS 203 ? CG ? A LYS 203 CG 19 1 Y 1 A LYS 203 ? CD ? A LYS 203 CD 20 1 Y 1 A LYS 203 ? CE ? A LYS 203 CE 21 1 Y 1 A LYS 203 ? NZ ? A LYS 203 NZ 22 1 Y 1 A GLN 260 ? CG ? A GLN 260 CG 23 1 Y 1 A GLN 260 ? CD ? A GLN 260 CD 24 1 Y 1 A GLN 260 ? OE1 ? A GLN 260 OE1 25 1 Y 1 A GLN 260 ? NE2 ? A GLN 260 NE2 26 1 Y 1 A ARG 270 ? CG ? A ARG 270 CG 27 1 Y 1 A ARG 270 ? CD ? A ARG 270 CD 28 1 Y 1 A ARG 270 ? NE ? A ARG 270 NE 29 1 Y 1 A ARG 270 ? CZ ? A ARG 270 CZ 30 1 Y 1 A ARG 270 ? NH1 ? A ARG 270 NH1 31 1 Y 1 A ARG 270 ? NH2 ? A ARG 270 NH2 32 1 Y 1 A LYS 321 ? CG ? A LYS 321 CG 33 1 Y 1 A LYS 321 ? CD ? A LYS 321 CD 34 1 Y 1 A LYS 321 ? CE ? A LYS 321 CE 35 1 Y 1 A LYS 321 ? NZ ? A LYS 321 NZ 36 1 Y 1 A ARG 323 ? CG ? A ARG 323 CG 37 1 Y 1 A ARG 323 ? CD ? A ARG 323 CD 38 1 Y 1 A ARG 323 ? NE ? A ARG 323 NE 39 1 Y 1 A ARG 323 ? CZ ? A ARG 323 CZ 40 1 Y 1 A ARG 323 ? NH1 ? A ARG 323 NH1 41 1 Y 1 A ARG 323 ? NH2 ? A ARG 323 NH2 42 1 Y 1 A GLU 376 ? CG ? A GLU 376 CG 43 1 Y 1 A GLU 376 ? CD ? A GLU 376 CD 44 1 Y 1 A GLU 376 ? OE1 ? A GLU 376 OE1 45 1 Y 1 A GLU 376 ? OE2 ? A GLU 376 OE2 46 1 Y 1 A GLN 377 ? CG ? A GLN 377 CG 47 1 Y 1 A GLN 377 ? CD ? A GLN 377 CD 48 1 Y 1 A GLN 377 ? OE1 ? A GLN 377 OE1 49 1 Y 1 A GLN 377 ? NE2 ? A GLN 377 NE2 50 1 Y 1 A ARG 380 ? CG ? A ARG 380 CG 51 1 Y 1 A ARG 380 ? CD ? A ARG 380 CD 52 1 Y 1 A ARG 380 ? NE ? A ARG 380 NE 53 1 Y 1 A ARG 380 ? CZ ? A ARG 380 CZ 54 1 Y 1 A ARG 380 ? NH1 ? A ARG 380 NH1 55 1 Y 1 A ARG 380 ? NH2 ? A ARG 380 NH2 56 1 Y 1 A ARG 412 ? CD ? A ARG 412 CD 57 1 Y 1 A ARG 412 ? NE ? A ARG 412 NE 58 1 Y 1 A ARG 412 ? CZ ? A ARG 412 CZ 59 1 Y 1 A ARG 412 ? NH1 ? A ARG 412 NH1 60 1 Y 1 A ARG 412 ? NH2 ? A ARG 412 NH2 61 1 Y 1 A ASP 428 ? CG ? A ASP 428 CG 62 1 Y 1 A ASP 428 ? OD1 ? A ASP 428 OD1 63 1 Y 1 A ASP 428 ? OD2 ? A ASP 428 OD2 64 1 Y 1 A LYS 445 ? CD ? A LYS 445 CD 65 1 Y 1 A LYS 445 ? CE ? A LYS 445 CE 66 1 Y 1 A LYS 445 ? NZ ? A LYS 445 NZ 67 1 N 1 A FGA 1455 ? CG ? E FGA 1 CG 68 1 N 1 A FGA 1455 ? CD ? E FGA 1 CD 69 1 N 1 A FGA 1455 ? OE1 ? E FGA 1 OE1 70 1 N 1 A FGA 1455 ? OE2 ? E FGA 1 OE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.8.0049 ? 1 xia2 'data reduction' . ? 2 xia2 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 4CVM _cell.length_a 58.540 _cell.length_b 86.050 _cell.length_c 88.240 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CVM _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 4CVM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.5 _exptl_crystal.density_percent_sol 50 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.2 M MG FORMATE, 20 % PEG3350' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.96780 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I03' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I03 _diffrn_source.pdbx_wavelength 0.96780 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4CVM _reflns.observed_criterion_sigma_I 3.7 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 61.61 _reflns.d_resolution_high 2.06 _reflns.number_obs 28306 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.16 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.60 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 12.8 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.06 _reflns_shell.d_res_low 2.11 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 1.17 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.70 _reflns_shell.pdbx_redundancy 13.3 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4CVM _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 26815 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 61.61 _refine.ls_d_res_high 2.06 _refine.ls_percent_reflns_obs 99.94 _refine.ls_R_factor_obs 0.18435 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18220 _refine.ls_R_factor_R_free 0.22442 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1427 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.949 _refine.correlation_coeff_Fo_to_Fc_free 0.936 _refine.B_iso_mean 31.660 _refine.aniso_B[1][1] -0.66 _refine.aniso_B[2][2] 0.42 _refine.aniso_B[3][3] 0.25 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES REFINED INDIVIDUALLY' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.188 _refine.pdbx_overall_ESU_R_Free 0.165 _refine.overall_SU_ML 0.105 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.822 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3151 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 87 _refine_hist.number_atoms_solvent 59 _refine_hist.number_atoms_total 3297 _refine_hist.d_res_high 2.06 _refine_hist.d_res_low 61.61 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.019 ? 3290 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 3188 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.773 2.006 ? 4492 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.895 3.006 ? 7282 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.205 5.000 ? 442 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 30.444 23.966 ? 116 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.899 15.000 ? 486 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.160 15.000 ? 22 'X-RAY DIFFRACTION' ? r_chiral_restr 0.103 0.200 ? 550 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.021 ? 3768 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 693 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.622 3.048 ? 1774 'X-RAY DIFFRACTION' ? r_mcbond_other 2.622 3.047 ? 1773 'X-RAY DIFFRACTION' ? r_mcangle_it 3.597 4.550 ? 2214 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.441 3.381 ? 1516 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.060 _refine_ls_shell.d_res_low 2.113 _refine_ls_shell.number_reflns_R_work 1950 _refine_ls_shell.R_factor_R_work 0.192 _refine_ls_shell.percent_reflns_obs 99.86 _refine_ls_shell.R_factor_R_free 0.277 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 118 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 4CVM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4CVM _struct.title 'PaMurF in complex with AMP-PNP and UDP-MurNAc-tripeptide (mDAP)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4CVM _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text 'LIGASE, MURF, TRIPEPTIDE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 7 ? I N N 8 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9HVZ7_PSEAE _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q9HVZ7 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4CVM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 458 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9HVZ7 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 458 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 458 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4CVM SER A 459 ? UNP Q9HVZ7 ? ? 'expression tag' 459 1 1 4CVM SER A 460 ? UNP Q9HVZ7 ? ? 'expression tag' 460 2 1 4CVM VAL A 461 ? UNP Q9HVZ7 ? ? 'expression tag' 461 3 1 4CVM ASP A 462 ? UNP Q9HVZ7 ? ? 'expression tag' 462 4 1 4CVM LYS A 463 ? UNP Q9HVZ7 ? ? 'expression tag' 463 5 1 4CVM LEU A 464 ? UNP Q9HVZ7 ? ? 'expression tag' 464 6 1 4CVM ALA A 465 ? UNP Q9HVZ7 ? ? 'expression tag' 465 7 1 4CVM ALA A 466 ? UNP Q9HVZ7 ? ? 'expression tag' 466 8 1 4CVM ALA A 467 ? UNP Q9HVZ7 ? ? 'expression tag' 467 9 1 4CVM LEU A 468 ? UNP Q9HVZ7 ? ? 'expression tag' 468 10 1 4CVM GLU A 469 ? UNP Q9HVZ7 ? ? 'expression tag' 469 11 1 4CVM HIS A 470 ? UNP Q9HVZ7 ? ? 'expression tag' 470 12 1 4CVM HIS A 471 ? UNP Q9HVZ7 ? ? 'expression tag' 471 13 1 4CVM HIS A 472 ? UNP Q9HVZ7 ? ? 'expression tag' 472 14 1 4CVM HIS A 473 ? UNP Q9HVZ7 ? ? 'expression tag' 473 15 1 4CVM HIS A 474 ? UNP Q9HVZ7 ? ? 'expression tag' 474 16 1 4CVM HIS A 475 ? UNP Q9HVZ7 ? ? 'expression tag' 475 17 1 4CVM GLU A 39 ? UNP Q9HVZ7 GLN 39 conflict 39 18 1 4CVM ASP A 428 ? UNP Q9HVZ7 GLN 428 conflict 428 19 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 10 ? ASP A 15 ? LEU A 10 ASP A 15 1 ? 6 HELX_P HELX_P2 2 GLY A 51 ? ASP A 53 ? GLY A 51 ASP A 53 5 ? 3 HELX_P HELX_P3 3 TYR A 54 ? LYS A 61 ? TYR A 54 LYS A 61 1 ? 8 HELX_P HELX_P4 4 ASP A 84 ? PHE A 100 ? ASP A 84 PHE A 100 1 ? 17 HELX_P HELX_P5 5 GLY A 112 ? GLY A 129 ? GLY A 112 GLY A 129 1 ? 18 HELX_P HELX_P6 6 LEU A 145 ? LEU A 152 ? LEU A 145 LEU A 152 1 ? 8 HELX_P HELX_P7 7 GLY A 171 ? ARG A 181 ? GLY A 171 ARG A 181 1 ? 11 HELX_P HELX_P8 8 GLY A 200 ? GLU A 210 ? GLY A 200 GLU A 210 1 ? 11 HELX_P HELX_P9 9 GLU A 210 ? LEU A 215 ? GLU A 210 LEU A 215 1 ? 6 HELX_P HELX_P10 10 ALA A 229 ? ALA A 237 ? ALA A 229 ALA A 237 1 ? 9 HELX_P HELX_P11 11 GLY A 286 ? LEU A 303 ? GLY A 286 LEU A 303 1 ? 18 HELX_P HELX_P12 12 PRO A 306 ? LEU A 317 ? PRO A 306 LEU A 317 1 ? 12 HELX_P HELX_P13 13 ASN A 343 ? GLY A 356 ? ASN A 343 GLY A 356 1 ? 14 HELX_P HELX_P14 14 ALA A 375 ? ALA A 387 ? ALA A 375 ALA A 387 1 ? 13 HELX_P HELX_P15 15 LEU A 399 ? GLY A 408 ? LEU A 399 GLY A 408 1 ? 10 HELX_P HELX_P16 16 ASP A 416 ? ALA A 425 ? ASP A 416 ALA A 425 1 ? 10 HELX_P HELX_P17 17 SER A 438 ? ALA A 442 ? SER A 438 ALA A 442 5 ? 5 HELX_P HELX_P18 18 MET A 443 ? CYS A 451 ? MET A 443 CYS A 451 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C UDP . PB ? ? ? 1_555 D MUB . O1 ? ? A UDP 1452 A MUB 1453 1_555 ? ? ? ? ? ? ? 1.688 ? ? covale2 covale one ? D MUB . C10 ? ? ? 1_555 B ALA . N ? ? A MUB 1453 A ALA 1454 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale3 covale both ? B ALA . C ? ? ? 1_555 E FGA . N ? ? A ALA 1454 A FGA 1455 1_555 ? ? ? ? ? ? ? 1.368 ? ? metalc1 metalc ? ? A THR 114 OG1 ? ? ? 1_555 G MG . MG ? ? A THR 114 A MG 1457 1_555 ? ? ? ? ? ? ? 2.696 ? ? metalc2 metalc ? ? A THR 114 OG1 ? ? ? 1_555 H MG . MG ? ? A THR 114 A MG 1458 1_555 ? ? ? ? ? ? ? 2.261 ? ? metalc3 metalc ? ? A ASN 140 OD1 ? ? ? 1_555 G MG . MG ? ? A ASN 140 A MG 1457 1_555 ? ? ? ? ? ? ? 2.653 ? ? metalc4 metalc ? ? A ASN 140 OD1 ? ? ? 1_555 H MG . MG ? ? A ASN 140 A MG 1458 1_555 ? ? ? ? ? ? ? 1.890 ? ? metalc5 metalc ? ? A GLU 164 OE2 ? ? ? 1_555 H MG . MG ? ? A GLU 164 A MG 1458 1_555 ? ? ? ? ? ? ? 2.365 ? ? metalc6 metalc ? ? F ANP . O2A ? ? ? 1_555 G MG . MG ? ? A ANP 1456 A MG 1457 1_555 ? ? ? ? ? ? ? 2.761 ? ? metalc7 metalc ? ? F ANP . O2B ? ? ? 1_555 G MG . MG ? ? A ANP 1456 A MG 1457 1_555 ? ? ? ? ? ? ? 2.580 ? ? metalc8 metalc ? ? F ANP . O2G ? ? ? 1_555 H MG . MG ? ? A ANP 1456 A MG 1458 1_555 ? ? ? ? ? ? ? 2.109 ? ? metalc9 metalc ? ? F ANP . O2B ? ? ? 1_555 H MG . MG ? ? A ANP 1456 A MG 1458 1_555 ? ? ? ? ? ? ? 2.076 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG1 ? A THR 114 ? A THR 114 ? 1_555 MG ? G MG . ? A MG 1457 ? 1_555 OD1 ? A ASN 140 ? A ASN 140 ? 1_555 66.2 ? 2 OG1 ? A THR 114 ? A THR 114 ? 1_555 MG ? G MG . ? A MG 1457 ? 1_555 O2A ? F ANP . ? A ANP 1456 ? 1_555 94.8 ? 3 OD1 ? A ASN 140 ? A ASN 140 ? 1_555 MG ? G MG . ? A MG 1457 ? 1_555 O2A ? F ANP . ? A ANP 1456 ? 1_555 160.8 ? 4 OG1 ? A THR 114 ? A THR 114 ? 1_555 MG ? G MG . ? A MG 1457 ? 1_555 O2B ? F ANP . ? A ANP 1456 ? 1_555 66.9 ? 5 OD1 ? A ASN 140 ? A ASN 140 ? 1_555 MG ? G MG . ? A MG 1457 ? 1_555 O2B ? F ANP . ? A ANP 1456 ? 1_555 97.1 ? 6 O2A ? F ANP . ? A ANP 1456 ? 1_555 MG ? G MG . ? A MG 1457 ? 1_555 O2B ? F ANP . ? A ANP 1456 ? 1_555 71.3 ? 7 OG1 ? A THR 114 ? A THR 114 ? 1_555 MG ? H MG . ? A MG 1458 ? 1_555 OD1 ? A ASN 140 ? A ASN 140 ? 1_555 89.0 ? 8 OG1 ? A THR 114 ? A THR 114 ? 1_555 MG ? H MG . ? A MG 1458 ? 1_555 OE2 ? A GLU 164 ? A GLU 164 ? 1_555 82.4 ? 9 OD1 ? A ASN 140 ? A ASN 140 ? 1_555 MG ? H MG . ? A MG 1458 ? 1_555 OE2 ? A GLU 164 ? A GLU 164 ? 1_555 94.0 ? 10 OG1 ? A THR 114 ? A THR 114 ? 1_555 MG ? H MG . ? A MG 1458 ? 1_555 O2G ? F ANP . ? A ANP 1456 ? 1_555 172.8 ? 11 OD1 ? A ASN 140 ? A ASN 140 ? 1_555 MG ? H MG . ? A MG 1458 ? 1_555 O2G ? F ANP . ? A ANP 1456 ? 1_555 97.2 ? 12 OE2 ? A GLU 164 ? A GLU 164 ? 1_555 MG ? H MG . ? A MG 1458 ? 1_555 O2G ? F ANP . ? A ANP 1456 ? 1_555 100.5 ? 13 OG1 ? A THR 114 ? A THR 114 ? 1_555 MG ? H MG . ? A MG 1458 ? 1_555 O2B ? F ANP . ? A ANP 1456 ? 1_555 84.1 ? 14 OD1 ? A ASN 140 ? A ASN 140 ? 1_555 MG ? H MG . ? A MG 1458 ? 1_555 O2B ? F ANP . ? A ANP 1456 ? 1_555 162.8 ? 15 OE2 ? A GLU 164 ? A GLU 164 ? 1_555 MG ? H MG . ? A MG 1458 ? 1_555 O2B ? F ANP . ? A ANP 1456 ? 1_555 100.7 ? 16 O2G ? F ANP . ? A ANP 1456 ? 1_555 MG ? H MG . ? A MG 1458 ? 1_555 O2B ? F ANP . ? A ANP 1456 ? 1_555 88.9 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 5 ? AC ? 9 ? AD ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? parallel AB 3 4 ? parallel AB 4 5 ? parallel AC 1 2 ? parallel AC 2 3 ? parallel AC 3 4 ? parallel AC 4 5 ? parallel AC 5 6 ? parallel AC 6 7 ? parallel AC 7 8 ? anti-parallel AC 8 9 ? anti-parallel AD 1 2 ? anti-parallel AD 2 3 ? parallel AD 3 4 ? parallel AD 4 5 ? parallel AD 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LEU A 5 ? ARG A 6 ? LEU A 5 ARG A 6 AA 2 VAL A 24 ? PHE A 25 ? VAL A 24 PHE A 25 AB 1 ARG A 17 ? ILE A 19 ? ARG A 17 ILE A 19 AB 2 GLN A 79 ? LEU A 81 ? GLN A 79 LEU A 81 AB 3 ALA A 65 ? VAL A 68 ? ALA A 65 VAL A 68 AB 4 GLU A 39 ? ILE A 42 ? GLU A 39 ILE A 42 AB 5 ALA A 27 ? SER A 29 ? ALA A 27 SER A 29 AC 1 VAL A 134 ? ALA A 136 ? VAL A 134 ALA A 136 AC 2 SER A 160 ? GLU A 164 ? SER A 160 GLU A 164 AC 3 LEU A 104 ? THR A 108 ? LEU A 104 THR A 108 AC 4 VAL A 184 ? ILE A 187 ? VAL A 184 ILE A 187 AC 5 THR A 220 ? ASN A 224 ? THR A 220 ASN A 224 AC 6 LEU A 242 ? SER A 246 ? LEU A 242 SER A 246 AC 7 PHE A 254 ? ARG A 261 ? PHE A 254 ARG A 261 AC 8 MET A 267 ? GLY A 273 ? MET A 267 GLY A 273 AC 9 ALA A 278 ? GLN A 281 ? ALA A 278 GLN A 281 AD 1 VAL A 325 ? LEU A 328 ? VAL A 325 LEU A 328 AD 2 ARG A 334 ? ASP A 338 ? ARG A 334 ASP A 338 AD 3 THR A 432 ? LYS A 436 ? THR A 432 LYS A 436 AD 4 THR A 361 ? GLY A 366 ? THR A 361 GLY A 366 AD 5 ALA A 392 ? VAL A 396 ? ALA A 392 VAL A 396 AD 6 GLY A 411 ? PHE A 414 ? GLY A 411 PHE A 414 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 5 ? N LEU A 5 O PHE A 25 ? O PHE A 25 AB 1 2 N ILE A 19 ? N ILE A 19 O GLN A 79 ? O GLN A 79 AB 2 3 N LEU A 80 ? N LEU A 80 O ALA A 66 ? O ALA A 66 AB 3 4 N LEU A 67 ? N LEU A 67 O PHE A 41 ? O PHE A 41 AB 4 5 N LEU A 40 ? N LEU A 40 O ALA A 27 ? O ALA A 27 AC 1 2 N LEU A 135 ? N LEU A 135 O SER A 160 ? O SER A 160 AC 2 3 N ILE A 163 ? N ILE A 163 O ALA A 105 ? O ALA A 105 AC 3 4 N ALA A 106 ? N ALA A 106 O VAL A 184 ? O VAL A 184 AC 4 5 N ALA A 185 ? N ALA A 185 O THR A 220 ? O THR A 220 AC 5 6 N LEU A 223 ? N LEU A 223 O LEU A 243 ? O LEU A 243 AC 6 7 N SER A 246 ? N SER A 246 O PHE A 254 ? O PHE A 254 AC 7 8 N GLN A 260 ? N GLN A 260 O GLY A 268 ? O GLY A 268 AC 8 9 N LEU A 271 ? N LEU A 271 O ALA A 278 ? O ALA A 278 AD 1 2 N GLN A 327 ? N GLN A 327 O VAL A 335 ? O VAL A 335 AD 2 3 N ILE A 336 ? N ILE A 336 O ILE A 433 ? O ILE A 433 AD 3 4 N LEU A 434 ? N LEU A 434 O VAL A 362 ? O VAL A 362 AD 4 5 N LEU A 363 ? N LEU A 363 O ALA A 392 ? O ALA A 392 AD 5 6 N ALA A 395 ? N ALA A 395 O ARG A 412 ? O ARG A 412 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 143 ? ? -103.85 -163.53 2 1 ALA A 216 ? ? -29.72 145.70 3 1 SER A 238 ? ? 53.02 -124.28 4 1 ALA A 425 ? ? -46.96 -10.50 5 1 THR A 430 ? ? 84.50 -13.58 # _pdbx_entry_details.entry_id 4CVM _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'CONTAINS A C-TERM HIS TAG' _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 196 ? A GLY 196 2 1 Y 1 A GLU 197 ? A GLU 197 3 1 Y 1 A PHE 198 ? A PHE 198 4 1 Y 1 A GLU 370 ? A GLU 370 5 1 Y 1 A LEU 371 ? A LEU 371 6 1 Y 1 A GLY 372 ? A GLY 372 7 1 Y 1 A SER 373 ? A SER 373 8 1 Y 1 A TRP 374 ? A TRP 374 9 1 Y 1 A GLY 452 ? A GLY 452 10 1 Y 1 A SER 453 ? A SER 453 11 1 Y 1 A SER 454 ? A SER 454 12 1 Y 1 A GLU 455 ? A GLU 455 13 1 Y 1 A GLU 456 ? A GLU 456 14 1 Y 1 A SER 457 ? A SER 457 15 1 Y 1 A HIS 458 ? A HIS 458 16 1 Y 1 A SER 459 ? A SER 459 17 1 Y 1 A SER 460 ? A SER 460 18 1 Y 1 A VAL 461 ? A VAL 461 19 1 Y 1 A ASP 462 ? A ASP 462 20 1 Y 1 A LYS 463 ? A LYS 463 21 1 Y 1 A LEU 464 ? A LEU 464 22 1 Y 1 A ALA 465 ? A ALA 465 23 1 Y 1 A ALA 466 ? A ALA 466 24 1 Y 1 A ALA 467 ? A ALA 467 25 1 Y 1 A LEU 468 ? A LEU 468 26 1 Y 1 A GLU 469 ? A GLU 469 27 1 Y 1 A HIS 470 ? A HIS 470 28 1 Y 1 A HIS 471 ? A HIS 471 29 1 Y 1 A HIS 472 ? A HIS 472 30 1 Y 1 A HIS 473 ? A HIS 473 31 1 Y 1 A HIS 474 ? A HIS 474 32 1 Y 1 A HIS 475 ? A HIS 475 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ANP PG P N N 14 ANP O1G O N N 15 ANP O2G O N N 16 ANP O3G O N N 17 ANP PB P N N 18 ANP O1B O N N 19 ANP O2B O N N 20 ANP N3B N N N 21 ANP PA P N N 22 ANP O1A O N N 23 ANP O2A O N N 24 ANP O3A O N N 25 ANP "O5'" O N N 26 ANP "C5'" C N N 27 ANP "C4'" C N R 28 ANP "O4'" O N N 29 ANP "C3'" C N S 30 ANP "O3'" O N N 31 ANP "C2'" C N R 32 ANP "O2'" O N N 33 ANP "C1'" C N R 34 ANP N9 N Y N 35 ANP C8 C Y N 36 ANP N7 N Y N 37 ANP C5 C Y N 38 ANP C6 C Y N 39 ANP N6 N N N 40 ANP N1 N Y N 41 ANP C2 C Y N 42 ANP N3 N Y N 43 ANP C4 C Y N 44 ANP HOG2 H N N 45 ANP HOG3 H N N 46 ANP HOB2 H N N 47 ANP HNB1 H N N 48 ANP HOA2 H N N 49 ANP "H5'1" H N N 50 ANP "H5'2" H N N 51 ANP "H4'" H N N 52 ANP "H3'" H N N 53 ANP "HO3'" H N N 54 ANP "H2'" H N N 55 ANP "HO2'" H N N 56 ANP "H1'" H N N 57 ANP H8 H N N 58 ANP HN61 H N N 59 ANP HN62 H N N 60 ANP H2 H N N 61 ARG N N N N 62 ARG CA C N S 63 ARG C C N N 64 ARG O O N N 65 ARG CB C N N 66 ARG CG C N N 67 ARG CD C N N 68 ARG NE N N N 69 ARG CZ C N N 70 ARG NH1 N N N 71 ARG NH2 N N N 72 ARG OXT O N N 73 ARG H H N N 74 ARG H2 H N N 75 ARG HA H N N 76 ARG HB2 H N N 77 ARG HB3 H N N 78 ARG HG2 H N N 79 ARG HG3 H N N 80 ARG HD2 H N N 81 ARG HD3 H N N 82 ARG HE H N N 83 ARG HH11 H N N 84 ARG HH12 H N N 85 ARG HH21 H N N 86 ARG HH22 H N N 87 ARG HXT H N N 88 ASN N N N N 89 ASN CA C N S 90 ASN C C N N 91 ASN O O N N 92 ASN CB C N N 93 ASN CG C N N 94 ASN OD1 O N N 95 ASN ND2 N N N 96 ASN OXT O N N 97 ASN H H N N 98 ASN H2 H N N 99 ASN HA H N N 100 ASN HB2 H N N 101 ASN HB3 H N N 102 ASN HD21 H N N 103 ASN HD22 H N N 104 ASN HXT H N N 105 ASP N N N N 106 ASP CA C N S 107 ASP C C N N 108 ASP O O N N 109 ASP CB C N N 110 ASP CG C N N 111 ASP OD1 O N N 112 ASP OD2 O N N 113 ASP OXT O N N 114 ASP H H N N 115 ASP H2 H N N 116 ASP HA H N N 117 ASP HB2 H N N 118 ASP HB3 H N N 119 ASP HD2 H N N 120 ASP HXT H N N 121 CYS N N N N 122 CYS CA C N R 123 CYS C C N N 124 CYS O O N N 125 CYS CB C N N 126 CYS SG S N N 127 CYS OXT O N N 128 CYS H H N N 129 CYS H2 H N N 130 CYS HA H N N 131 CYS HB2 H N N 132 CYS HB3 H N N 133 CYS HG H N N 134 CYS HXT H N N 135 FGA N N N N 136 FGA CA C N R 137 FGA C C N N 138 FGA O O N N 139 FGA CB C N N 140 FGA CG C N N 141 FGA CD C N N 142 FGA OE1 O N N 143 FGA OE2 O N N 144 FGA OXT O N N 145 FGA H H N N 146 FGA H2 H N N 147 FGA HA H N N 148 FGA HB2 H N N 149 FGA HB3 H N N 150 FGA HG2 H N N 151 FGA HG3 H N N 152 FGA HE2 H N N 153 FGA HXT H N N 154 GLN N N N N 155 GLN CA C N S 156 GLN C C N N 157 GLN O O N N 158 GLN CB C N N 159 GLN CG C N N 160 GLN CD C N N 161 GLN OE1 O N N 162 GLN NE2 N N N 163 GLN OXT O N N 164 GLN H H N N 165 GLN H2 H N N 166 GLN HA H N N 167 GLN HB2 H N N 168 GLN HB3 H N N 169 GLN HG2 H N N 170 GLN HG3 H N N 171 GLN HE21 H N N 172 GLN HE22 H N N 173 GLN HXT H N N 174 GLU N N N N 175 GLU CA C N S 176 GLU C C N N 177 GLU O O N N 178 GLU CB C N N 179 GLU CG C N N 180 GLU CD C N N 181 GLU OE1 O N N 182 GLU OE2 O N N 183 GLU OXT O N N 184 GLU H H N N 185 GLU H2 H N N 186 GLU HA H N N 187 GLU HB2 H N N 188 GLU HB3 H N N 189 GLU HG2 H N N 190 GLU HG3 H N N 191 GLU HE2 H N N 192 GLU HXT H N N 193 GLY N N N N 194 GLY CA C N N 195 GLY C C N N 196 GLY O O N N 197 GLY OXT O N N 198 GLY H H N N 199 GLY H2 H N N 200 GLY HA2 H N N 201 GLY HA3 H N N 202 GLY HXT H N N 203 HIS N N N N 204 HIS CA C N S 205 HIS C C N N 206 HIS O O N N 207 HIS CB C N N 208 HIS CG C Y N 209 HIS ND1 N Y N 210 HIS CD2 C Y N 211 HIS CE1 C Y N 212 HIS NE2 N Y N 213 HIS OXT O N N 214 HIS H H N N 215 HIS H2 H N N 216 HIS HA H N N 217 HIS HB2 H N N 218 HIS HB3 H N N 219 HIS HD1 H N N 220 HIS HD2 H N N 221 HIS HE1 H N N 222 HIS HE2 H N N 223 HIS HXT H N N 224 HOH O O N N 225 HOH H1 H N N 226 HOH H2 H N N 227 ILE N N N N 228 ILE CA C N S 229 ILE C C N N 230 ILE O O N N 231 ILE CB C N S 232 ILE CG1 C N N 233 ILE CG2 C N N 234 ILE CD1 C N N 235 ILE OXT O N N 236 ILE H H N N 237 ILE H2 H N N 238 ILE HA H N N 239 ILE HB H N N 240 ILE HG12 H N N 241 ILE HG13 H N N 242 ILE HG21 H N N 243 ILE HG22 H N N 244 ILE HG23 H N N 245 ILE HD11 H N N 246 ILE HD12 H N N 247 ILE HD13 H N N 248 ILE HXT H N N 249 LEU N N N N 250 LEU CA C N S 251 LEU C C N N 252 LEU O O N N 253 LEU CB C N N 254 LEU CG C N N 255 LEU CD1 C N N 256 LEU CD2 C N N 257 LEU OXT O N N 258 LEU H H N N 259 LEU H2 H N N 260 LEU HA H N N 261 LEU HB2 H N N 262 LEU HB3 H N N 263 LEU HG H N N 264 LEU HD11 H N N 265 LEU HD12 H N N 266 LEU HD13 H N N 267 LEU HD21 H N N 268 LEU HD22 H N N 269 LEU HD23 H N N 270 LEU HXT H N N 271 LYS N N N N 272 LYS CA C N S 273 LYS C C N N 274 LYS O O N N 275 LYS CB C N N 276 LYS CG C N N 277 LYS CD C N N 278 LYS CE C N N 279 LYS NZ N N N 280 LYS OXT O N N 281 LYS H H N N 282 LYS H2 H N N 283 LYS HA H N N 284 LYS HB2 H N N 285 LYS HB3 H N N 286 LYS HG2 H N N 287 LYS HG3 H N N 288 LYS HD2 H N N 289 LYS HD3 H N N 290 LYS HE2 H N N 291 LYS HE3 H N N 292 LYS HZ1 H N N 293 LYS HZ2 H N N 294 LYS HZ3 H N N 295 LYS HXT H N N 296 MET N N N N 297 MET CA C N S 298 MET C C N N 299 MET O O N N 300 MET CB C N N 301 MET CG C N N 302 MET SD S N N 303 MET CE C N N 304 MET OXT O N N 305 MET H H N N 306 MET H2 H N N 307 MET HA H N N 308 MET HB2 H N N 309 MET HB3 H N N 310 MET HG2 H N N 311 MET HG3 H N N 312 MET HE1 H N N 313 MET HE2 H N N 314 MET HE3 H N N 315 MET HXT H N N 316 MG MG MG N N 317 MUB C1 C N S 318 MUB C2 C N R 319 MUB C3 C N R 320 MUB C4 C N S 321 MUB C5 C N R 322 MUB C6 C N N 323 MUB C7 C N N 324 MUB C8 C N N 325 MUB C9 C N R 326 MUB C10 C N N 327 MUB C11 C N N 328 MUB O1 O N N 329 MUB O3 O N N 330 MUB O4 O N N 331 MUB O5 O N N 332 MUB O6 O N N 333 MUB O7 O N N 334 MUB O11 O N N 335 MUB O10 O N N 336 MUB N2 N N N 337 MUB H1 H N N 338 MUB H2 H N N 339 MUB HN2 H N N 340 MUB H81 H N N 341 MUB H82 H N N 342 MUB H83 H N N 343 MUB H3 H N N 344 MUB H9 H N N 345 MUB H111 H N N 346 MUB H112 H N N 347 MUB H113 H N N 348 MUB H4 H N N 349 MUB H5 H N N 350 MUB H61 H N N 351 MUB H62 H N N 352 MUB HO6 H N N 353 MUB HO4 H N N 354 MUB HO11 H N N 355 MUB HO1 H N N 356 PHE N N N N 357 PHE CA C N S 358 PHE C C N N 359 PHE O O N N 360 PHE CB C N N 361 PHE CG C Y N 362 PHE CD1 C Y N 363 PHE CD2 C Y N 364 PHE CE1 C Y N 365 PHE CE2 C Y N 366 PHE CZ C Y N 367 PHE OXT O N N 368 PHE H H N N 369 PHE H2 H N N 370 PHE HA H N N 371 PHE HB2 H N N 372 PHE HB3 H N N 373 PHE HD1 H N N 374 PHE HD2 H N N 375 PHE HE1 H N N 376 PHE HE2 H N N 377 PHE HZ H N N 378 PHE HXT H N N 379 PRO N N N N 380 PRO CA C N S 381 PRO C C N N 382 PRO O O N N 383 PRO CB C N N 384 PRO CG C N N 385 PRO CD C N N 386 PRO OXT O N N 387 PRO H H N N 388 PRO HA H N N 389 PRO HB2 H N N 390 PRO HB3 H N N 391 PRO HG2 H N N 392 PRO HG3 H N N 393 PRO HD2 H N N 394 PRO HD3 H N N 395 PRO HXT H N N 396 SER N N N N 397 SER CA C N S 398 SER C C N N 399 SER O O N N 400 SER CB C N N 401 SER OG O N N 402 SER OXT O N N 403 SER H H N N 404 SER H2 H N N 405 SER HA H N N 406 SER HB2 H N N 407 SER HB3 H N N 408 SER HG H N N 409 SER HXT H N N 410 THR N N N N 411 THR CA C N S 412 THR C C N N 413 THR O O N N 414 THR CB C N R 415 THR OG1 O N N 416 THR CG2 C N N 417 THR OXT O N N 418 THR H H N N 419 THR H2 H N N 420 THR HA H N N 421 THR HB H N N 422 THR HG1 H N N 423 THR HG21 H N N 424 THR HG22 H N N 425 THR HG23 H N N 426 THR HXT H N N 427 TRP N N N N 428 TRP CA C N S 429 TRP C C N N 430 TRP O O N N 431 TRP CB C N N 432 TRP CG C Y N 433 TRP CD1 C Y N 434 TRP CD2 C Y N 435 TRP NE1 N Y N 436 TRP CE2 C Y N 437 TRP CE3 C Y N 438 TRP CZ2 C Y N 439 TRP CZ3 C Y N 440 TRP CH2 C Y N 441 TRP OXT O N N 442 TRP H H N N 443 TRP H2 H N N 444 TRP HA H N N 445 TRP HB2 H N N 446 TRP HB3 H N N 447 TRP HD1 H N N 448 TRP HE1 H N N 449 TRP HE3 H N N 450 TRP HZ2 H N N 451 TRP HZ3 H N N 452 TRP HH2 H N N 453 TRP HXT H N N 454 TYR N N N N 455 TYR CA C N S 456 TYR C C N N 457 TYR O O N N 458 TYR CB C N N 459 TYR CG C Y N 460 TYR CD1 C Y N 461 TYR CD2 C Y N 462 TYR CE1 C Y N 463 TYR CE2 C Y N 464 TYR CZ C Y N 465 TYR OH O N N 466 TYR OXT O N N 467 TYR H H N N 468 TYR H2 H N N 469 TYR HA H N N 470 TYR HB2 H N N 471 TYR HB3 H N N 472 TYR HD1 H N N 473 TYR HD2 H N N 474 TYR HE1 H N N 475 TYR HE2 H N N 476 TYR HH H N N 477 TYR HXT H N N 478 UDP N1 N N N 479 UDP C2 C N N 480 UDP N3 N N N 481 UDP C4 C N N 482 UDP C5 C N N 483 UDP C6 C N N 484 UDP O2 O N N 485 UDP O4 O N N 486 UDP "C1'" C N R 487 UDP "C2'" C N R 488 UDP "O2'" O N N 489 UDP "C3'" C N S 490 UDP "C4'" C N R 491 UDP "O4'" O N N 492 UDP "O3'" O N N 493 UDP "C5'" C N N 494 UDP "O5'" O N N 495 UDP PA P N N 496 UDP O1A O N N 497 UDP O2A O N N 498 UDP O3A O N N 499 UDP PB P N N 500 UDP O1B O N N 501 UDP O2B O N N 502 UDP O3B O N N 503 UDP HN3 H N N 504 UDP H5 H N N 505 UDP H6 H N N 506 UDP "H1'" H N N 507 UDP "H2'" H N N 508 UDP "HO2'" H N N 509 UDP "H3'" H N N 510 UDP "H4'" H N N 511 UDP "HO3'" H N N 512 UDP "H5'1" H N N 513 UDP "H5'2" H N N 514 UDP HOA2 H N N 515 UDP HOB2 H N N 516 UDP HOB3 H N N 517 VAL N N N N 518 VAL CA C N S 519 VAL C C N N 520 VAL O O N N 521 VAL CB C N N 522 VAL CG1 C N N 523 VAL CG2 C N N 524 VAL OXT O N N 525 VAL H H N N 526 VAL H2 H N N 527 VAL HA H N N 528 VAL HB H N N 529 VAL HG11 H N N 530 VAL HG12 H N N 531 VAL HG13 H N N 532 VAL HG21 H N N 533 VAL HG22 H N N 534 VAL HG23 H N N 535 VAL HXT H N N 536 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ANP PG O1G doub N N 13 ANP PG O2G sing N N 14 ANP PG O3G sing N N 15 ANP PG N3B sing N N 16 ANP O2G HOG2 sing N N 17 ANP O3G HOG3 sing N N 18 ANP PB O1B doub N N 19 ANP PB O2B sing N N 20 ANP PB N3B sing N N 21 ANP PB O3A sing N N 22 ANP O2B HOB2 sing N N 23 ANP N3B HNB1 sing N N 24 ANP PA O1A doub N N 25 ANP PA O2A sing N N 26 ANP PA O3A sing N N 27 ANP PA "O5'" sing N N 28 ANP O2A HOA2 sing N N 29 ANP "O5'" "C5'" sing N N 30 ANP "C5'" "C4'" sing N N 31 ANP "C5'" "H5'1" sing N N 32 ANP "C5'" "H5'2" sing N N 33 ANP "C4'" "O4'" sing N N 34 ANP "C4'" "C3'" sing N N 35 ANP "C4'" "H4'" sing N N 36 ANP "O4'" "C1'" sing N N 37 ANP "C3'" "O3'" sing N N 38 ANP "C3'" "C2'" sing N N 39 ANP "C3'" "H3'" sing N N 40 ANP "O3'" "HO3'" sing N N 41 ANP "C2'" "O2'" sing N N 42 ANP "C2'" "C1'" sing N N 43 ANP "C2'" "H2'" sing N N 44 ANP "O2'" "HO2'" sing N N 45 ANP "C1'" N9 sing N N 46 ANP "C1'" "H1'" sing N N 47 ANP N9 C8 sing Y N 48 ANP N9 C4 sing Y N 49 ANP C8 N7 doub Y N 50 ANP C8 H8 sing N N 51 ANP N7 C5 sing Y N 52 ANP C5 C6 sing Y N 53 ANP C5 C4 doub Y N 54 ANP C6 N6 sing N N 55 ANP C6 N1 doub Y N 56 ANP N6 HN61 sing N N 57 ANP N6 HN62 sing N N 58 ANP N1 C2 sing Y N 59 ANP C2 N3 doub Y N 60 ANP C2 H2 sing N N 61 ANP N3 C4 sing Y N 62 ARG N CA sing N N 63 ARG N H sing N N 64 ARG N H2 sing N N 65 ARG CA C sing N N 66 ARG CA CB sing N N 67 ARG CA HA sing N N 68 ARG C O doub N N 69 ARG C OXT sing N N 70 ARG CB CG sing N N 71 ARG CB HB2 sing N N 72 ARG CB HB3 sing N N 73 ARG CG CD sing N N 74 ARG CG HG2 sing N N 75 ARG CG HG3 sing N N 76 ARG CD NE sing N N 77 ARG CD HD2 sing N N 78 ARG CD HD3 sing N N 79 ARG NE CZ sing N N 80 ARG NE HE sing N N 81 ARG CZ NH1 sing N N 82 ARG CZ NH2 doub N N 83 ARG NH1 HH11 sing N N 84 ARG NH1 HH12 sing N N 85 ARG NH2 HH21 sing N N 86 ARG NH2 HH22 sing N N 87 ARG OXT HXT sing N N 88 ASN N CA sing N N 89 ASN N H sing N N 90 ASN N H2 sing N N 91 ASN CA C sing N N 92 ASN CA CB sing N N 93 ASN CA HA sing N N 94 ASN C O doub N N 95 ASN C OXT sing N N 96 ASN CB CG sing N N 97 ASN CB HB2 sing N N 98 ASN CB HB3 sing N N 99 ASN CG OD1 doub N N 100 ASN CG ND2 sing N N 101 ASN ND2 HD21 sing N N 102 ASN ND2 HD22 sing N N 103 ASN OXT HXT sing N N 104 ASP N CA sing N N 105 ASP N H sing N N 106 ASP N H2 sing N N 107 ASP CA C sing N N 108 ASP CA CB sing N N 109 ASP CA HA sing N N 110 ASP C O doub N N 111 ASP C OXT sing N N 112 ASP CB CG sing N N 113 ASP CB HB2 sing N N 114 ASP CB HB3 sing N N 115 ASP CG OD1 doub N N 116 ASP CG OD2 sing N N 117 ASP OD2 HD2 sing N N 118 ASP OXT HXT sing N N 119 CYS N CA sing N N 120 CYS N H sing N N 121 CYS N H2 sing N N 122 CYS CA C sing N N 123 CYS CA CB sing N N 124 CYS CA HA sing N N 125 CYS C O doub N N 126 CYS C OXT sing N N 127 CYS CB SG sing N N 128 CYS CB HB2 sing N N 129 CYS CB HB3 sing N N 130 CYS SG HG sing N N 131 CYS OXT HXT sing N N 132 FGA N CA sing N N 133 FGA N H sing N N 134 FGA N H2 sing N N 135 FGA CA C sing N N 136 FGA CA CB sing N N 137 FGA CA HA sing N N 138 FGA C O doub N N 139 FGA C OXT sing N N 140 FGA CB CG sing N N 141 FGA CB HB2 sing N N 142 FGA CB HB3 sing N N 143 FGA CG CD sing N N 144 FGA CG HG2 sing N N 145 FGA CG HG3 sing N N 146 FGA CD OE1 doub N N 147 FGA CD OE2 sing N N 148 FGA OE2 HE2 sing N N 149 FGA OXT HXT sing N N 150 GLN N CA sing N N 151 GLN N H sing N N 152 GLN N H2 sing N N 153 GLN CA C sing N N 154 GLN CA CB sing N N 155 GLN CA HA sing N N 156 GLN C O doub N N 157 GLN C OXT sing N N 158 GLN CB CG sing N N 159 GLN CB HB2 sing N N 160 GLN CB HB3 sing N N 161 GLN CG CD sing N N 162 GLN CG HG2 sing N N 163 GLN CG HG3 sing N N 164 GLN CD OE1 doub N N 165 GLN CD NE2 sing N N 166 GLN NE2 HE21 sing N N 167 GLN NE2 HE22 sing N N 168 GLN OXT HXT sing N N 169 GLU N CA sing N N 170 GLU N H sing N N 171 GLU N H2 sing N N 172 GLU CA C sing N N 173 GLU CA CB sing N N 174 GLU CA HA sing N N 175 GLU C O doub N N 176 GLU C OXT sing N N 177 GLU CB CG sing N N 178 GLU CB HB2 sing N N 179 GLU CB HB3 sing N N 180 GLU CG CD sing N N 181 GLU CG HG2 sing N N 182 GLU CG HG3 sing N N 183 GLU CD OE1 doub N N 184 GLU CD OE2 sing N N 185 GLU OE2 HE2 sing N N 186 GLU OXT HXT sing N N 187 GLY N CA sing N N 188 GLY N H sing N N 189 GLY N H2 sing N N 190 GLY CA C sing N N 191 GLY CA HA2 sing N N 192 GLY CA HA3 sing N N 193 GLY C O doub N N 194 GLY C OXT sing N N 195 GLY OXT HXT sing N N 196 HIS N CA sing N N 197 HIS N H sing N N 198 HIS N H2 sing N N 199 HIS CA C sing N N 200 HIS CA CB sing N N 201 HIS CA HA sing N N 202 HIS C O doub N N 203 HIS C OXT sing N N 204 HIS CB CG sing N N 205 HIS CB HB2 sing N N 206 HIS CB HB3 sing N N 207 HIS CG ND1 sing Y N 208 HIS CG CD2 doub Y N 209 HIS ND1 CE1 doub Y N 210 HIS ND1 HD1 sing N N 211 HIS CD2 NE2 sing Y N 212 HIS CD2 HD2 sing N N 213 HIS CE1 NE2 sing Y N 214 HIS CE1 HE1 sing N N 215 HIS NE2 HE2 sing N N 216 HIS OXT HXT sing N N 217 HOH O H1 sing N N 218 HOH O H2 sing N N 219 ILE N CA sing N N 220 ILE N H sing N N 221 ILE N H2 sing N N 222 ILE CA C sing N N 223 ILE CA CB sing N N 224 ILE CA HA sing N N 225 ILE C O doub N N 226 ILE C OXT sing N N 227 ILE CB CG1 sing N N 228 ILE CB CG2 sing N N 229 ILE CB HB sing N N 230 ILE CG1 CD1 sing N N 231 ILE CG1 HG12 sing N N 232 ILE CG1 HG13 sing N N 233 ILE CG2 HG21 sing N N 234 ILE CG2 HG22 sing N N 235 ILE CG2 HG23 sing N N 236 ILE CD1 HD11 sing N N 237 ILE CD1 HD12 sing N N 238 ILE CD1 HD13 sing N N 239 ILE OXT HXT sing N N 240 LEU N CA sing N N 241 LEU N H sing N N 242 LEU N H2 sing N N 243 LEU CA C sing N N 244 LEU CA CB sing N N 245 LEU CA HA sing N N 246 LEU C O doub N N 247 LEU C OXT sing N N 248 LEU CB CG sing N N 249 LEU CB HB2 sing N N 250 LEU CB HB3 sing N N 251 LEU CG CD1 sing N N 252 LEU CG CD2 sing N N 253 LEU CG HG sing N N 254 LEU CD1 HD11 sing N N 255 LEU CD1 HD12 sing N N 256 LEU CD1 HD13 sing N N 257 LEU CD2 HD21 sing N N 258 LEU CD2 HD22 sing N N 259 LEU CD2 HD23 sing N N 260 LEU OXT HXT sing N N 261 LYS N CA sing N N 262 LYS N H sing N N 263 LYS N H2 sing N N 264 LYS CA C sing N N 265 LYS CA CB sing N N 266 LYS CA HA sing N N 267 LYS C O doub N N 268 LYS C OXT sing N N 269 LYS CB CG sing N N 270 LYS CB HB2 sing N N 271 LYS CB HB3 sing N N 272 LYS CG CD sing N N 273 LYS CG HG2 sing N N 274 LYS CG HG3 sing N N 275 LYS CD CE sing N N 276 LYS CD HD2 sing N N 277 LYS CD HD3 sing N N 278 LYS CE NZ sing N N 279 LYS CE HE2 sing N N 280 LYS CE HE3 sing N N 281 LYS NZ HZ1 sing N N 282 LYS NZ HZ2 sing N N 283 LYS NZ HZ3 sing N N 284 LYS OXT HXT sing N N 285 MET N CA sing N N 286 MET N H sing N N 287 MET N H2 sing N N 288 MET CA C sing N N 289 MET CA CB sing N N 290 MET CA HA sing N N 291 MET C O doub N N 292 MET C OXT sing N N 293 MET CB CG sing N N 294 MET CB HB2 sing N N 295 MET CB HB3 sing N N 296 MET CG SD sing N N 297 MET CG HG2 sing N N 298 MET CG HG3 sing N N 299 MET SD CE sing N N 300 MET CE HE1 sing N N 301 MET CE HE2 sing N N 302 MET CE HE3 sing N N 303 MET OXT HXT sing N N 304 MUB C1 C2 sing N N 305 MUB C2 C3 sing N N 306 MUB C3 C4 sing N N 307 MUB C4 C5 sing N N 308 MUB C5 C6 sing N N 309 MUB C7 C8 sing N N 310 MUB C9 C10 sing N N 311 MUB C9 C11 sing N N 312 MUB C1 O1 sing N N 313 MUB C3 O3 sing N N 314 MUB C9 O3 sing N N 315 MUB C4 O4 sing N N 316 MUB C1 O5 sing N N 317 MUB C5 O5 sing N N 318 MUB C6 O6 sing N N 319 MUB C7 O7 doub N N 320 MUB C10 O11 sing N N 321 MUB C10 O10 doub N N 322 MUB C2 N2 sing N N 323 MUB C7 N2 sing N N 324 MUB C1 H1 sing N N 325 MUB C2 H2 sing N N 326 MUB N2 HN2 sing N N 327 MUB C8 H81 sing N N 328 MUB C8 H82 sing N N 329 MUB C8 H83 sing N N 330 MUB C3 H3 sing N N 331 MUB C9 H9 sing N N 332 MUB C11 H111 sing N N 333 MUB C11 H112 sing N N 334 MUB C11 H113 sing N N 335 MUB C4 H4 sing N N 336 MUB C5 H5 sing N N 337 MUB C6 H61 sing N N 338 MUB C6 H62 sing N N 339 MUB O6 HO6 sing N N 340 MUB O4 HO4 sing N N 341 MUB O11 HO11 sing N N 342 MUB O1 HO1 sing N N 343 PHE N CA sing N N 344 PHE N H sing N N 345 PHE N H2 sing N N 346 PHE CA C sing N N 347 PHE CA CB sing N N 348 PHE CA HA sing N N 349 PHE C O doub N N 350 PHE C OXT sing N N 351 PHE CB CG sing N N 352 PHE CB HB2 sing N N 353 PHE CB HB3 sing N N 354 PHE CG CD1 doub Y N 355 PHE CG CD2 sing Y N 356 PHE CD1 CE1 sing Y N 357 PHE CD1 HD1 sing N N 358 PHE CD2 CE2 doub Y N 359 PHE CD2 HD2 sing N N 360 PHE CE1 CZ doub Y N 361 PHE CE1 HE1 sing N N 362 PHE CE2 CZ sing Y N 363 PHE CE2 HE2 sing N N 364 PHE CZ HZ sing N N 365 PHE OXT HXT sing N N 366 PRO N CA sing N N 367 PRO N CD sing N N 368 PRO N H sing N N 369 PRO CA C sing N N 370 PRO CA CB sing N N 371 PRO CA HA sing N N 372 PRO C O doub N N 373 PRO C OXT sing N N 374 PRO CB CG sing N N 375 PRO CB HB2 sing N N 376 PRO CB HB3 sing N N 377 PRO CG CD sing N N 378 PRO CG HG2 sing N N 379 PRO CG HG3 sing N N 380 PRO CD HD2 sing N N 381 PRO CD HD3 sing N N 382 PRO OXT HXT sing N N 383 SER N CA sing N N 384 SER N H sing N N 385 SER N H2 sing N N 386 SER CA C sing N N 387 SER CA CB sing N N 388 SER CA HA sing N N 389 SER C O doub N N 390 SER C OXT sing N N 391 SER CB OG sing N N 392 SER CB HB2 sing N N 393 SER CB HB3 sing N N 394 SER OG HG sing N N 395 SER OXT HXT sing N N 396 THR N CA sing N N 397 THR N H sing N N 398 THR N H2 sing N N 399 THR CA C sing N N 400 THR CA CB sing N N 401 THR CA HA sing N N 402 THR C O doub N N 403 THR C OXT sing N N 404 THR CB OG1 sing N N 405 THR CB CG2 sing N N 406 THR CB HB sing N N 407 THR OG1 HG1 sing N N 408 THR CG2 HG21 sing N N 409 THR CG2 HG22 sing N N 410 THR CG2 HG23 sing N N 411 THR OXT HXT sing N N 412 TRP N CA sing N N 413 TRP N H sing N N 414 TRP N H2 sing N N 415 TRP CA C sing N N 416 TRP CA CB sing N N 417 TRP CA HA sing N N 418 TRP C O doub N N 419 TRP C OXT sing N N 420 TRP CB CG sing N N 421 TRP CB HB2 sing N N 422 TRP CB HB3 sing N N 423 TRP CG CD1 doub Y N 424 TRP CG CD2 sing Y N 425 TRP CD1 NE1 sing Y N 426 TRP CD1 HD1 sing N N 427 TRP CD2 CE2 doub Y N 428 TRP CD2 CE3 sing Y N 429 TRP NE1 CE2 sing Y N 430 TRP NE1 HE1 sing N N 431 TRP CE2 CZ2 sing Y N 432 TRP CE3 CZ3 doub Y N 433 TRP CE3 HE3 sing N N 434 TRP CZ2 CH2 doub Y N 435 TRP CZ2 HZ2 sing N N 436 TRP CZ3 CH2 sing Y N 437 TRP CZ3 HZ3 sing N N 438 TRP CH2 HH2 sing N N 439 TRP OXT HXT sing N N 440 TYR N CA sing N N 441 TYR N H sing N N 442 TYR N H2 sing N N 443 TYR CA C sing N N 444 TYR CA CB sing N N 445 TYR CA HA sing N N 446 TYR C O doub N N 447 TYR C OXT sing N N 448 TYR CB CG sing N N 449 TYR CB HB2 sing N N 450 TYR CB HB3 sing N N 451 TYR CG CD1 doub Y N 452 TYR CG CD2 sing Y N 453 TYR CD1 CE1 sing Y N 454 TYR CD1 HD1 sing N N 455 TYR CD2 CE2 doub Y N 456 TYR CD2 HD2 sing N N 457 TYR CE1 CZ doub Y N 458 TYR CE1 HE1 sing N N 459 TYR CE2 CZ sing Y N 460 TYR CE2 HE2 sing N N 461 TYR CZ OH sing N N 462 TYR OH HH sing N N 463 TYR OXT HXT sing N N 464 UDP N1 C2 sing N N 465 UDP N1 C6 sing N N 466 UDP N1 "C1'" sing N N 467 UDP C2 N3 sing N N 468 UDP C2 O2 doub N N 469 UDP N3 C4 sing N N 470 UDP N3 HN3 sing N N 471 UDP C4 C5 sing N N 472 UDP C4 O4 doub N N 473 UDP C5 C6 doub N N 474 UDP C5 H5 sing N N 475 UDP C6 H6 sing N N 476 UDP "C1'" "C2'" sing N N 477 UDP "C1'" "O4'" sing N N 478 UDP "C1'" "H1'" sing N N 479 UDP "C2'" "O2'" sing N N 480 UDP "C2'" "C3'" sing N N 481 UDP "C2'" "H2'" sing N N 482 UDP "O2'" "HO2'" sing N N 483 UDP "C3'" "C4'" sing N N 484 UDP "C3'" "O3'" sing N N 485 UDP "C3'" "H3'" sing N N 486 UDP "C4'" "O4'" sing N N 487 UDP "C4'" "C5'" sing N N 488 UDP "C4'" "H4'" sing N N 489 UDP "O3'" "HO3'" sing N N 490 UDP "C5'" "O5'" sing N N 491 UDP "C5'" "H5'1" sing N N 492 UDP "C5'" "H5'2" sing N N 493 UDP "O5'" PA sing N N 494 UDP PA O1A doub N N 495 UDP PA O2A sing N N 496 UDP PA O3A sing N N 497 UDP O2A HOA2 sing N N 498 UDP O3A PB sing N N 499 UDP PB O1B doub N N 500 UDP PB O2B sing N N 501 UDP PB O3B sing N N 502 UDP O2B HOB2 sing N N 503 UDP O3B HOB3 sing N N 504 VAL N CA sing N N 505 VAL N H sing N N 506 VAL N H2 sing N N 507 VAL CA C sing N N 508 VAL CA CB sing N N 509 VAL CA HA sing N N 510 VAL C O doub N N 511 VAL C OXT sing N N 512 VAL CB CG1 sing N N 513 VAL CB CG2 sing N N 514 VAL CB HB sing N N 515 VAL CG1 HG11 sing N N 516 VAL CG1 HG12 sing N N 517 VAL CG1 HG13 sing N N 518 VAL CG2 HG21 sing N N 519 VAL CG2 HG22 sing N N 520 VAL CG2 HG23 sing N N 521 VAL OXT HXT sing N N 522 # _atom_sites.entry_id 4CVM _atom_sites.fract_transf_matrix[1][1] 0.017082 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011621 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011333 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_