data_4CXO # _entry.id 4CXO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4CXO pdb_00004cxo 10.2210/pdb4cxo/pdb PDBE EBI-60232 ? ? WWPDB D_1290060232 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-07-23 2 'Structure model' 1 1 2015-01-28 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-12-20 5 'Structure model' 2 2 2024-11-06 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' Other 7 3 'Structure model' 'Structure summary' 8 4 'Structure model' 'Data collection' 9 4 'Structure model' 'Database references' 10 4 'Structure model' 'Refinement description' 11 4 'Structure model' 'Structure summary' 12 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' atom_site_anisotrop 3 3 'Structure model' chem_comp 4 3 'Structure model' entity 5 3 'Structure model' pdbx_branch_scheme 6 3 'Structure model' pdbx_chem_comp_identifier 7 3 'Structure model' pdbx_database_status 8 3 'Structure model' pdbx_entity_branch 9 3 'Structure model' pdbx_entity_branch_descriptor 10 3 'Structure model' pdbx_entity_branch_link 11 3 'Structure model' pdbx_entity_branch_list 12 3 'Structure model' pdbx_entity_nonpoly 13 3 'Structure model' pdbx_nonpoly_scheme 14 3 'Structure model' pdbx_struct_assembly_gen 15 3 'Structure model' pdbx_struct_conn_angle 16 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 17 3 'Structure model' pdbx_validate_close_contact 18 3 'Structure model' struct_asym 19 3 'Structure model' struct_conn 20 3 'Structure model' struct_site 21 3 'Structure model' struct_site_gen 22 4 'Structure model' chem_comp 23 4 'Structure model' chem_comp_atom 24 4 'Structure model' chem_comp_bond 25 4 'Structure model' database_2 26 4 'Structure model' pdbx_initial_refinement_model 27 5 'Structure model' pdbx_entry_details 28 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.auth_asym_id' 2 3 'Structure model' '_atom_site.auth_seq_id' 3 3 'Structure model' '_atom_site.label_asym_id' 4 3 'Structure model' '_atom_site.label_entity_id' 5 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 6 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 7 3 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 8 3 'Structure model' '_chem_comp.name' 9 3 'Structure model' '_chem_comp.type' 10 3 'Structure model' '_entity.formula_weight' 11 3 'Structure model' '_entity.pdbx_description' 12 3 'Structure model' '_entity.pdbx_number_of_molecules' 13 3 'Structure model' '_entity.type' 14 3 'Structure model' '_pdbx_database_status.status_code_sf' 15 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 23 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 24 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 25 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 26 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 27 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 28 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 29 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 30 3 'Structure model' '_pdbx_struct_conn_angle.value' 31 3 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.label_asym_id' 32 3 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1' 33 3 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 34 3 'Structure model' '_struct_conn.pdbx_dist_value' 35 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 36 3 'Structure model' '_struct_conn.pdbx_role' 37 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 38 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 39 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 40 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 41 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 42 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 43 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 44 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 45 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 46 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 47 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 48 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 49 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 50 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 51 4 'Structure model' '_chem_comp.pdbx_synonyms' 52 4 'Structure model' '_database_2.pdbx_DOI' 53 4 'Structure model' '_database_2.pdbx_database_accession' 54 5 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4CXO _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-04-08 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4CWM unspecified 'HIGH-GLYCOSYLATION CRYSTAL STRUCTURE OF THE BIFUNCTIONAL ENDONUCLEASE (ATBFN2) FROM ARABIDOPSIS THALIANA' PDB 4CXP unspecified 'STRUCTURE OF BIFUNCTIONAL ENDONUCLEASE (ATBFN2) FROM ARABIDOPSIS THALIANA IN COMPLEX WITH SULFATE' PDB 4CXV unspecified 'STRUCTURE OF BIFUNCTIONAL ENDONUCLEASE (ATBFN2) IN COMPLEX WITH PHOSPHATE.' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yu, T.-F.' 1 'Maestre-Reyna, M.' 2 'Ko, C.-Y.' 3 'Ko, T.-P.' 4 'Sun, Y.-J.' 5 'Lin, T.-Y.' 6 'Shaw, J.-F.' 7 'Wang, A.H.-J.' 8 # _citation.id primary _citation.title 'Structural Insights of the Ssdna Binding Site in the Multifunctional Endonuclease Atbfn2 from Arabidopsis Thaliana.' _citation.journal_abbrev 'Plos One' _citation.journal_volume 9 _citation.page_first 05821 _citation.page_last ? _citation.year 2014 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25157844 _citation.pdbx_database_id_DOI 10.1371/JOURNAL.PONE.0105821 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yu, T.' 1 ? primary 'Maestre-Reyna, M.' 2 ? primary 'Ko, C.' 3 ? primary 'Ko, T.' 4 ? primary 'Sun, Y.' 5 ? primary 'Lin, T.' 6 ? primary 'Shaw, J.' 7 ? primary 'Wang, A.H.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ENDONUCLEASE 2' 30607.141 1 3.1.30.1 ? ? ? 2 branched man ;alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 910.823 1 ? ? ? ? 3 branched man ;alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 748.682 1 ? ? ? ? 4 branched man 'alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 586.542 1 ? ? ? ? 5 non-polymer syn "THYMIDINE-5'-PHOSPHATE" 322.208 2 ? ? ? ? 6 non-polymer syn "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" 331.222 1 ? ? ? ? 7 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? ? 8 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 9 water nat water 18.015 324 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ATENDO2, DEOXYRIBONUCLEASE ENDO2, SINGLE-STRANDED-NUCLEATE ENDONUCLEASE ENDO2, BIFUNCTIONAL ENDONUCLEASE ATBFN2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;WGKEGHEIICKIAQTRLDETAAKAVKELLPESAEGDLSSLCLWADRVKFRYHWSSPLHYINTPDACSYQYNRDCKDESGE KGRCVAGAIYNYTTQLLSYKTAASSQSEYNLTEALLFVSHFMGDIHQPLHVSYASDKGGNTIEVHWYTRKANLHHIWDSN IIETAEADLYNSALEGMVDALKKNITTEWADQVKRWETCTKKTACPDIYASEGIQAACDWAYKGVTEGDTLEDEYFYSRL PIVYQRLAQGGVRLAATLNRIFGHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;WGKEGHEIICKIAQTRLDETAAKAVKELLPESAEGDLSSLCLWADRVKFRYHWSSPLHYINTPDACSYQYNRDCKDESGE KGRCVAGAIYNYTTQLLSYKTAASSQSEYNLTEALLFVSHFMGDIHQPLHVSYASDKGGNTIEVHWYTRKANLHHIWDSN IIETAEADLYNSALEGMVDALKKNITTEWADQVKRWETCTKKTACPDIYASEGIQAACDWAYKGVTEGDTLEDEYFYSRL PIVYQRLAQGGVRLAATLNRIFGHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 "THYMIDINE-5'-PHOSPHATE" TMP 6 "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" D5M 7 'ZINC ION' ZN 8 'SULFATE ION' SO4 9 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TRP n 1 2 GLY n 1 3 LYS n 1 4 GLU n 1 5 GLY n 1 6 HIS n 1 7 GLU n 1 8 ILE n 1 9 ILE n 1 10 CYS n 1 11 LYS n 1 12 ILE n 1 13 ALA n 1 14 GLN n 1 15 THR n 1 16 ARG n 1 17 LEU n 1 18 ASP n 1 19 GLU n 1 20 THR n 1 21 ALA n 1 22 ALA n 1 23 LYS n 1 24 ALA n 1 25 VAL n 1 26 LYS n 1 27 GLU n 1 28 LEU n 1 29 LEU n 1 30 PRO n 1 31 GLU n 1 32 SER n 1 33 ALA n 1 34 GLU n 1 35 GLY n 1 36 ASP n 1 37 LEU n 1 38 SER n 1 39 SER n 1 40 LEU n 1 41 CYS n 1 42 LEU n 1 43 TRP n 1 44 ALA n 1 45 ASP n 1 46 ARG n 1 47 VAL n 1 48 LYS n 1 49 PHE n 1 50 ARG n 1 51 TYR n 1 52 HIS n 1 53 TRP n 1 54 SER n 1 55 SER n 1 56 PRO n 1 57 LEU n 1 58 HIS n 1 59 TYR n 1 60 ILE n 1 61 ASN n 1 62 THR n 1 63 PRO n 1 64 ASP n 1 65 ALA n 1 66 CYS n 1 67 SER n 1 68 TYR n 1 69 GLN n 1 70 TYR n 1 71 ASN n 1 72 ARG n 1 73 ASP n 1 74 CYS n 1 75 LYS n 1 76 ASP n 1 77 GLU n 1 78 SER n 1 79 GLY n 1 80 GLU n 1 81 LYS n 1 82 GLY n 1 83 ARG n 1 84 CYS n 1 85 VAL n 1 86 ALA n 1 87 GLY n 1 88 ALA n 1 89 ILE n 1 90 TYR n 1 91 ASN n 1 92 TYR n 1 93 THR n 1 94 THR n 1 95 GLN n 1 96 LEU n 1 97 LEU n 1 98 SER n 1 99 TYR n 1 100 LYS n 1 101 THR n 1 102 ALA n 1 103 ALA n 1 104 SER n 1 105 SER n 1 106 GLN n 1 107 SER n 1 108 GLU n 1 109 TYR n 1 110 ASN n 1 111 LEU n 1 112 THR n 1 113 GLU n 1 114 ALA n 1 115 LEU n 1 116 LEU n 1 117 PHE n 1 118 VAL n 1 119 SER n 1 120 HIS n 1 121 PHE n 1 122 MET n 1 123 GLY n 1 124 ASP n 1 125 ILE n 1 126 HIS n 1 127 GLN n 1 128 PRO n 1 129 LEU n 1 130 HIS n 1 131 VAL n 1 132 SER n 1 133 TYR n 1 134 ALA n 1 135 SER n 1 136 ASP n 1 137 LYS n 1 138 GLY n 1 139 GLY n 1 140 ASN n 1 141 THR n 1 142 ILE n 1 143 GLU n 1 144 VAL n 1 145 HIS n 1 146 TRP n 1 147 TYR n 1 148 THR n 1 149 ARG n 1 150 LYS n 1 151 ALA n 1 152 ASN n 1 153 LEU n 1 154 HIS n 1 155 HIS n 1 156 ILE n 1 157 TRP n 1 158 ASP n 1 159 SER n 1 160 ASN n 1 161 ILE n 1 162 ILE n 1 163 GLU n 1 164 THR n 1 165 ALA n 1 166 GLU n 1 167 ALA n 1 168 ASP n 1 169 LEU n 1 170 TYR n 1 171 ASN n 1 172 SER n 1 173 ALA n 1 174 LEU n 1 175 GLU n 1 176 GLY n 1 177 MET n 1 178 VAL n 1 179 ASP n 1 180 ALA n 1 181 LEU n 1 182 LYS n 1 183 LYS n 1 184 ASN n 1 185 ILE n 1 186 THR n 1 187 THR n 1 188 GLU n 1 189 TRP n 1 190 ALA n 1 191 ASP n 1 192 GLN n 1 193 VAL n 1 194 LYS n 1 195 ARG n 1 196 TRP n 1 197 GLU n 1 198 THR n 1 199 CYS n 1 200 THR n 1 201 LYS n 1 202 LYS n 1 203 THR n 1 204 ALA n 1 205 CYS n 1 206 PRO n 1 207 ASP n 1 208 ILE n 1 209 TYR n 1 210 ALA n 1 211 SER n 1 212 GLU n 1 213 GLY n 1 214 ILE n 1 215 GLN n 1 216 ALA n 1 217 ALA n 1 218 CYS n 1 219 ASP n 1 220 TRP n 1 221 ALA n 1 222 TYR n 1 223 LYS n 1 224 GLY n 1 225 VAL n 1 226 THR n 1 227 GLU n 1 228 GLY n 1 229 ASP n 1 230 THR n 1 231 LEU n 1 232 GLU n 1 233 ASP n 1 234 GLU n 1 235 TYR n 1 236 PHE n 1 237 TYR n 1 238 SER n 1 239 ARG n 1 240 LEU n 1 241 PRO n 1 242 ILE n 1 243 VAL n 1 244 TYR n 1 245 GLN n 1 246 ARG n 1 247 LEU n 1 248 ALA n 1 249 GLN n 1 250 GLY n 1 251 GLY n 1 252 VAL n 1 253 ARG n 1 254 LEU n 1 255 ALA n 1 256 ALA n 1 257 THR n 1 258 LEU n 1 259 ASN n 1 260 ARG n 1 261 ILE n 1 262 PHE n 1 263 GLY n 1 264 HIS n 1 265 HIS n 1 266 HIS n 1 267 HIS n 1 268 HIS n 1 269 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'THALE CRESS' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'ARABIDOPSIS THALIANA' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3702 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'THALE CRESS' _entity_src_gen.pdbx_host_org_scientific_name 'ARABIDOPSIS THALIANA' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 3702 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector 'A. TUMEFACIENS' _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'DManpa1-3[DManpa1-6]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,5,4/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-3/a4-b1_b4-c1_c3-d1_c6-e1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}[(6+1)][a-D-Manp]{}}}}}' LINUCS PDB-CARE ? 4 3 DManpa1-3DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 5 3 'WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3/a4-b1_b4-c1_c3-d1' WURCS PDB2Glycan 1.1.0 6 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}}}}}' LINUCS PDB-CARE ? 7 4 DManpa1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 8 4 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1a_1-5]/1-1-2/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 9 4 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][a-D-Manp]{}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 2 4 MAN C1 O1 3 BMA O3 HO3 sing ? 4 2 5 MAN C1 O1 3 BMA O6 HO6 sing ? 5 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 6 3 3 BMA C1 O1 2 NAG O4 HO4 sing ? 7 3 4 MAN C1 O1 3 BMA O3 HO3 sing ? 8 4 2 NAG C1 O1 1 NAG O4 HO4 sing ? 9 4 3 MAN C1 O1 2 NAG O4 HO4 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 D5M non-polymer . "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TMP non-polymer . "THYMIDINE-5'-PHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TRP 1 1 1 TRP TRP A . n A 1 2 GLY 2 2 2 GLY GLY A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 GLY 5 5 5 GLY GLY A . n A 1 6 HIS 6 6 6 HIS HIS A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 CYS 10 10 10 CYS CYS A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 PRO 30 30 30 PRO PRO A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 CYS 41 41 41 CYS CYS A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 TRP 43 43 43 TRP TRP A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 HIS 52 52 52 HIS HIS A . n A 1 53 TRP 53 53 53 TRP TRP A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 HIS 58 58 58 HIS HIS A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 PRO 63 63 63 PRO PRO A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 CYS 66 66 66 CYS CYS A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 TYR 68 68 68 TYR TYR A . n A 1 69 GLN 69 69 69 GLN GLN A . n A 1 70 TYR 70 70 70 TYR TYR A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 CYS 74 74 74 CYS CYS A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 ASP 76 76 76 ASP ASP A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 CYS 84 84 84 CYS CYS A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 TYR 90 90 90 TYR TYR A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 TYR 92 92 92 TYR TYR A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 THR 94 94 94 THR THR A . n A 1 95 GLN 95 95 95 GLN GLN A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 TYR 99 99 99 TYR TYR A . n A 1 100 LYS 100 100 ? ? ? A . n A 1 101 THR 101 101 ? ? ? A . n A 1 102 ALA 102 102 ? ? ? A . n A 1 103 ALA 103 103 ? ? ? A . n A 1 104 SER 104 104 ? ? ? A . n A 1 105 SER 105 105 ? ? ? A . n A 1 106 GLN 106 106 ? ? ? A . n A 1 107 SER 107 107 107 SER SER A . n A 1 108 GLU 108 108 108 GLU GLU A . n A 1 109 TYR 109 109 109 TYR TYR A . n A 1 110 ASN 110 110 110 ASN ASN A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 THR 112 112 112 THR THR A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 PHE 117 117 117 PHE PHE A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 SER 119 119 119 SER SER A . n A 1 120 HIS 120 120 120 HIS HIS A . n A 1 121 PHE 121 121 121 PHE PHE A . n A 1 122 MET 122 122 122 MET MET A . n A 1 123 GLY 123 123 123 GLY GLY A . n A 1 124 ASP 124 124 124 ASP ASP A . n A 1 125 ILE 125 125 125 ILE ILE A . n A 1 126 HIS 126 126 126 HIS HIS A . n A 1 127 GLN 127 127 127 GLN GLN A . n A 1 128 PRO 128 128 128 PRO PRO A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 HIS 130 130 130 HIS HIS A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 SER 132 132 132 SER SER A . n A 1 133 TYR 133 133 133 TYR TYR A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 SER 135 135 135 SER SER A . n A 1 136 ASP 136 136 136 ASP ASP A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 ASN 140 140 140 ASN ASN A . n A 1 141 THR 141 141 141 THR THR A . n A 1 142 ILE 142 142 142 ILE ILE A . n A 1 143 GLU 143 143 143 GLU GLU A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 HIS 145 145 145 HIS HIS A . n A 1 146 TRP 146 146 146 TRP TRP A . n A 1 147 TYR 147 147 147 TYR TYR A . n A 1 148 THR 148 148 148 THR THR A . n A 1 149 ARG 149 149 149 ARG ARG A . n A 1 150 LYS 150 150 150 LYS LYS A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 ASN 152 152 152 ASN ASN A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 HIS 154 154 154 HIS HIS A . n A 1 155 HIS 155 155 155 HIS HIS A . n A 1 156 ILE 156 156 156 ILE ILE A . n A 1 157 TRP 157 157 157 TRP TRP A . n A 1 158 ASP 158 158 158 ASP ASP A . n A 1 159 SER 159 159 159 SER SER A . n A 1 160 ASN 160 160 160 ASN ASN A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 ILE 162 162 162 ILE ILE A . n A 1 163 GLU 163 163 163 GLU GLU A . n A 1 164 THR 164 164 164 THR THR A . n A 1 165 ALA 165 165 165 ALA ALA A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 ALA 167 167 167 ALA ALA A . n A 1 168 ASP 168 168 168 ASP ASP A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 TYR 170 170 170 TYR TYR A . n A 1 171 ASN 171 171 171 ASN ASN A . n A 1 172 SER 172 172 172 SER SER A . n A 1 173 ALA 173 173 173 ALA ALA A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 GLU 175 175 175 GLU GLU A . n A 1 176 GLY 176 176 176 GLY GLY A . n A 1 177 MET 177 177 177 MET MET A . n A 1 178 VAL 178 178 178 VAL VAL A . n A 1 179 ASP 179 179 179 ASP ASP A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 LEU 181 181 181 LEU LEU A . n A 1 182 LYS 182 182 182 LYS LYS A . n A 1 183 LYS 183 183 183 LYS LYS A . n A 1 184 ASN 184 184 184 ASN ASN A . n A 1 185 ILE 185 185 185 ILE ILE A . n A 1 186 THR 186 186 186 THR THR A . n A 1 187 THR 187 187 187 THR THR A . n A 1 188 GLU 188 188 188 GLU GLU A . n A 1 189 TRP 189 189 189 TRP TRP A . n A 1 190 ALA 190 190 190 ALA ALA A . n A 1 191 ASP 191 191 191 ASP ASP A . n A 1 192 GLN 192 192 192 GLN GLN A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 LYS 194 194 194 LYS LYS A . n A 1 195 ARG 195 195 195 ARG ARG A . n A 1 196 TRP 196 196 196 TRP TRP A . n A 1 197 GLU 197 197 197 GLU GLU A . n A 1 198 THR 198 198 198 THR THR A . n A 1 199 CYS 199 199 199 CYS CYS A . n A 1 200 THR 200 200 200 THR THR A . n A 1 201 LYS 201 201 201 LYS LYS A . n A 1 202 LYS 202 202 ? ? ? A . n A 1 203 THR 203 203 203 THR THR A . n A 1 204 ALA 204 204 204 ALA ALA A . n A 1 205 CYS 205 205 205 CYS CYS A . n A 1 206 PRO 206 206 206 PRO PRO A . n A 1 207 ASP 207 207 207 ASP ASP A . n A 1 208 ILE 208 208 208 ILE ILE A . n A 1 209 TYR 209 209 209 TYR TYR A . n A 1 210 ALA 210 210 210 ALA ALA A . n A 1 211 SER 211 211 211 SER SER A . n A 1 212 GLU 212 212 212 GLU GLU A . n A 1 213 GLY 213 213 213 GLY GLY A . n A 1 214 ILE 214 214 214 ILE ILE A . n A 1 215 GLN 215 215 215 GLN GLN A . n A 1 216 ALA 216 216 216 ALA ALA A . n A 1 217 ALA 217 217 217 ALA ALA A . n A 1 218 CYS 218 218 218 CYS CYS A . n A 1 219 ASP 219 219 219 ASP ASP A . n A 1 220 TRP 220 220 220 TRP TRP A . n A 1 221 ALA 221 221 221 ALA ALA A . n A 1 222 TYR 222 222 222 TYR TYR A . n A 1 223 LYS 223 223 223 LYS LYS A . n A 1 224 GLY 224 224 224 GLY GLY A . n A 1 225 VAL 225 225 225 VAL VAL A . n A 1 226 THR 226 226 226 THR THR A . n A 1 227 GLU 227 227 227 GLU GLU A . n A 1 228 GLY 228 228 228 GLY GLY A . n A 1 229 ASP 229 229 229 ASP ASP A . n A 1 230 THR 230 230 230 THR THR A . n A 1 231 LEU 231 231 231 LEU LEU A . n A 1 232 GLU 232 232 232 GLU GLU A . n A 1 233 ASP 233 233 233 ASP ASP A . n A 1 234 GLU 234 234 234 GLU GLU A . n A 1 235 TYR 235 235 235 TYR TYR A . n A 1 236 PHE 236 236 236 PHE PHE A . n A 1 237 TYR 237 237 237 TYR TYR A . n A 1 238 SER 238 238 238 SER SER A . n A 1 239 ARG 239 239 239 ARG ARG A . n A 1 240 LEU 240 240 240 LEU LEU A . n A 1 241 PRO 241 241 241 PRO PRO A . n A 1 242 ILE 242 242 242 ILE ILE A . n A 1 243 VAL 243 243 243 VAL VAL A . n A 1 244 TYR 244 244 244 TYR TYR A . n A 1 245 GLN 245 245 245 GLN GLN A . n A 1 246 ARG 246 246 246 ARG ARG A . n A 1 247 LEU 247 247 247 LEU LEU A . n A 1 248 ALA 248 248 248 ALA ALA A . n A 1 249 GLN 249 249 249 GLN GLN A . n A 1 250 GLY 250 250 250 GLY GLY A . n A 1 251 GLY 251 251 251 GLY GLY A . n A 1 252 VAL 252 252 252 VAL VAL A . n A 1 253 ARG 253 253 253 ARG ARG A . n A 1 254 LEU 254 254 254 LEU LEU A . n A 1 255 ALA 255 255 255 ALA ALA A . n A 1 256 ALA 256 256 256 ALA ALA A . n A 1 257 THR 257 257 257 THR THR A . n A 1 258 LEU 258 258 258 LEU LEU A . n A 1 259 ASN 259 259 259 ASN ASN A . n A 1 260 ARG 260 260 260 ARG ARG A . n A 1 261 ILE 261 261 261 ILE ILE A . n A 1 262 PHE 262 262 262 PHE PHE A . n A 1 263 GLY 263 263 263 GLY GLY A . n A 1 264 HIS 264 264 264 HIS HIS A . n A 1 265 HIS 265 265 ? ? ? A . n A 1 266 HIS 266 266 ? ? ? A . n A 1 267 HIS 267 267 ? ? ? A . n A 1 268 HIS 268 268 ? ? ? A . n A 1 269 HIS 269 269 ? ? ? A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 301 n B 2 NAG 2 B NAG 2 A NAG 302 n B 2 BMA 3 B BMA 3 A BMA 303 n B 2 MAN 4 B MAN 4 A MAN 304 n B 2 MAN 5 B MAN 5 A MAN 305 n C 3 NAG 1 C NAG 1 A NAG 331 n C 3 NAG 2 C NAG 2 A NAG 332 n C 3 BMA 3 C BMA 3 A BMA 333 n C 3 MAN 4 C MAN 4 A MAN 334 n D 4 NAG 1 D NAG 1 A NAG 361 n D 4 NAG 2 D NAG 2 A NAG 362 n D 4 MAN 3 D MAN 3 A MAN 363 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 TMP 1 401 401 TMP TMP A . F 6 D5M 1 430 430 D5M D5M A . G 5 TMP 1 431 431 TMP TMP A . H 7 ZN 1 451 451 ZN ZN A . I 7 ZN 1 452 452 ZN ZN A . J 7 ZN 1 453 453 ZN ZN A . K 8 SO4 1 461 461 SO4 SO4 A . L 9 HOH 1 2001 2001 HOH HOH A . L 9 HOH 2 2002 2002 HOH HOH A . L 9 HOH 3 2003 2003 HOH HOH A . L 9 HOH 4 2004 2004 HOH HOH A . L 9 HOH 5 2005 2005 HOH HOH A . L 9 HOH 6 2006 2006 HOH HOH A . L 9 HOH 7 2007 2007 HOH HOH A . L 9 HOH 8 2008 2008 HOH HOH A . L 9 HOH 9 2009 2009 HOH HOH A . L 9 HOH 10 2010 2010 HOH HOH A . L 9 HOH 11 2011 2011 HOH HOH A . L 9 HOH 12 2012 2012 HOH HOH A . L 9 HOH 13 2013 2013 HOH HOH A . L 9 HOH 14 2014 2014 HOH HOH A . L 9 HOH 15 2015 2015 HOH HOH A . L 9 HOH 16 2016 2016 HOH HOH A . L 9 HOH 17 2017 2017 HOH HOH A . L 9 HOH 18 2018 2018 HOH HOH A . L 9 HOH 19 2019 2019 HOH HOH A . L 9 HOH 20 2020 2020 HOH HOH A . L 9 HOH 21 2021 2021 HOH HOH A . L 9 HOH 22 2022 2022 HOH HOH A . L 9 HOH 23 2023 2023 HOH HOH A . L 9 HOH 24 2024 2024 HOH HOH A . L 9 HOH 25 2025 2025 HOH HOH A . L 9 HOH 26 2026 2026 HOH HOH A . L 9 HOH 27 2027 2027 HOH HOH A . L 9 HOH 28 2028 2028 HOH HOH A . L 9 HOH 29 2029 2029 HOH HOH A . L 9 HOH 30 2030 2030 HOH HOH A . L 9 HOH 31 2031 2031 HOH HOH A . L 9 HOH 32 2032 2032 HOH HOH A . L 9 HOH 33 2033 2033 HOH HOH A . L 9 HOH 34 2034 2034 HOH HOH A . L 9 HOH 35 2035 2035 HOH HOH A . L 9 HOH 36 2036 2036 HOH HOH A . L 9 HOH 37 2037 2037 HOH HOH A . L 9 HOH 38 2038 2038 HOH HOH A . L 9 HOH 39 2039 2039 HOH HOH A . L 9 HOH 40 2040 2040 HOH HOH A . L 9 HOH 41 2041 2041 HOH HOH A . L 9 HOH 42 2042 2042 HOH HOH A . L 9 HOH 43 2043 2043 HOH HOH A . L 9 HOH 44 2044 2044 HOH HOH A . L 9 HOH 45 2045 2045 HOH HOH A . L 9 HOH 46 2046 2046 HOH HOH A . L 9 HOH 47 2047 2047 HOH HOH A . L 9 HOH 48 2048 2048 HOH HOH A . L 9 HOH 49 2049 2049 HOH HOH A . L 9 HOH 50 2050 2050 HOH HOH A . L 9 HOH 51 2051 2051 HOH HOH A . L 9 HOH 52 2052 2052 HOH HOH A . L 9 HOH 53 2053 2053 HOH HOH A . L 9 HOH 54 2054 2054 HOH HOH A . L 9 HOH 55 2055 2055 HOH HOH A . L 9 HOH 56 2056 2056 HOH HOH A . L 9 HOH 57 2057 2057 HOH HOH A . L 9 HOH 58 2058 2058 HOH HOH A . L 9 HOH 59 2059 2059 HOH HOH A . L 9 HOH 60 2060 2060 HOH HOH A . L 9 HOH 61 2061 2061 HOH HOH A . L 9 HOH 62 2062 2062 HOH HOH A . L 9 HOH 63 2063 2063 HOH HOH A . L 9 HOH 64 2064 2064 HOH HOH A . L 9 HOH 65 2065 2065 HOH HOH A . L 9 HOH 66 2066 2066 HOH HOH A . L 9 HOH 67 2067 2067 HOH HOH A . L 9 HOH 68 2068 2068 HOH HOH A . L 9 HOH 69 2069 2069 HOH HOH A . L 9 HOH 70 2070 2070 HOH HOH A . L 9 HOH 71 2071 2071 HOH HOH A . L 9 HOH 72 2072 2072 HOH HOH A . L 9 HOH 73 2073 2073 HOH HOH A . L 9 HOH 74 2074 2074 HOH HOH A . L 9 HOH 75 2075 2075 HOH HOH A . L 9 HOH 76 2076 2076 HOH HOH A . L 9 HOH 77 2077 2077 HOH HOH A . L 9 HOH 78 2078 2078 HOH HOH A . L 9 HOH 79 2079 2079 HOH HOH A . L 9 HOH 80 2080 2080 HOH HOH A . L 9 HOH 81 2081 2081 HOH HOH A . L 9 HOH 82 2082 2082 HOH HOH A . L 9 HOH 83 2083 2083 HOH HOH A . L 9 HOH 84 2084 2084 HOH HOH A . L 9 HOH 85 2085 2085 HOH HOH A . L 9 HOH 86 2086 2086 HOH HOH A . L 9 HOH 87 2087 2087 HOH HOH A . L 9 HOH 88 2088 2088 HOH HOH A . L 9 HOH 89 2089 2089 HOH HOH A . L 9 HOH 90 2090 2090 HOH HOH A . L 9 HOH 91 2091 2091 HOH HOH A . L 9 HOH 92 2092 2092 HOH HOH A . L 9 HOH 93 2093 2093 HOH HOH A . L 9 HOH 94 2094 2094 HOH HOH A . L 9 HOH 95 2095 2095 HOH HOH A . L 9 HOH 96 2096 2096 HOH HOH A . L 9 HOH 97 2097 2097 HOH HOH A . L 9 HOH 98 2098 2098 HOH HOH A . L 9 HOH 99 2099 2099 HOH HOH A . L 9 HOH 100 2100 2100 HOH HOH A . L 9 HOH 101 2101 2101 HOH HOH A . L 9 HOH 102 2102 2102 HOH HOH A . L 9 HOH 103 2103 2103 HOH HOH A . L 9 HOH 104 2104 2104 HOH HOH A . L 9 HOH 105 2105 2105 HOH HOH A . L 9 HOH 106 2106 2106 HOH HOH A . L 9 HOH 107 2107 2107 HOH HOH A . L 9 HOH 108 2108 2108 HOH HOH A . L 9 HOH 109 2109 2109 HOH HOH A . L 9 HOH 110 2110 2110 HOH HOH A . L 9 HOH 111 2111 2111 HOH HOH A . L 9 HOH 112 2112 2112 HOH HOH A . L 9 HOH 113 2113 2113 HOH HOH A . L 9 HOH 114 2114 2114 HOH HOH A . L 9 HOH 115 2115 2115 HOH HOH A . L 9 HOH 116 2116 2116 HOH HOH A . L 9 HOH 117 2117 2117 HOH HOH A . L 9 HOH 118 2118 2118 HOH HOH A . L 9 HOH 119 2119 2119 HOH HOH A . L 9 HOH 120 2120 2120 HOH HOH A . L 9 HOH 121 2121 2121 HOH HOH A . L 9 HOH 122 2122 2122 HOH HOH A . L 9 HOH 123 2123 2123 HOH HOH A . L 9 HOH 124 2124 2124 HOH HOH A . L 9 HOH 125 2125 2125 HOH HOH A . L 9 HOH 126 2126 2126 HOH HOH A . L 9 HOH 127 2127 2127 HOH HOH A . L 9 HOH 128 2128 2128 HOH HOH A . L 9 HOH 129 2129 2129 HOH HOH A . L 9 HOH 130 2130 2130 HOH HOH A . L 9 HOH 131 2131 2131 HOH HOH A . L 9 HOH 132 2132 2132 HOH HOH A . L 9 HOH 133 2133 2133 HOH HOH A . L 9 HOH 134 2134 2134 HOH HOH A . L 9 HOH 135 2135 2135 HOH HOH A . L 9 HOH 136 2136 2136 HOH HOH A . L 9 HOH 137 2137 2137 HOH HOH A . L 9 HOH 138 2138 2138 HOH HOH A . L 9 HOH 139 2139 2139 HOH HOH A . L 9 HOH 140 2140 2140 HOH HOH A . L 9 HOH 141 2141 2141 HOH HOH A . L 9 HOH 142 2142 2142 HOH HOH A . L 9 HOH 143 2143 2143 HOH HOH A . L 9 HOH 144 2144 2144 HOH HOH A . L 9 HOH 145 2145 2145 HOH HOH A . L 9 HOH 146 2146 2146 HOH HOH A . L 9 HOH 147 2147 2147 HOH HOH A . L 9 HOH 148 2148 2148 HOH HOH A . L 9 HOH 149 2149 2149 HOH HOH A . L 9 HOH 150 2150 2150 HOH HOH A . L 9 HOH 151 2151 2151 HOH HOH A . L 9 HOH 152 2152 2152 HOH HOH A . L 9 HOH 153 2153 2153 HOH HOH A . L 9 HOH 154 2154 2154 HOH HOH A . L 9 HOH 155 2155 2155 HOH HOH A . L 9 HOH 156 2156 2156 HOH HOH A . L 9 HOH 157 2157 2157 HOH HOH A . L 9 HOH 158 2158 2158 HOH HOH A . L 9 HOH 159 2159 2159 HOH HOH A . L 9 HOH 160 2160 2160 HOH HOH A . L 9 HOH 161 2161 2161 HOH HOH A . L 9 HOH 162 2162 2162 HOH HOH A . L 9 HOH 163 2163 2163 HOH HOH A . L 9 HOH 164 2164 2164 HOH HOH A . L 9 HOH 165 2165 2165 HOH HOH A . L 9 HOH 166 2166 2166 HOH HOH A . L 9 HOH 167 2167 2167 HOH HOH A . L 9 HOH 168 2168 2168 HOH HOH A . L 9 HOH 169 2169 2169 HOH HOH A . L 9 HOH 170 2170 2170 HOH HOH A . L 9 HOH 171 2171 2171 HOH HOH A . L 9 HOH 172 2172 2172 HOH HOH A . L 9 HOH 173 2173 2173 HOH HOH A . L 9 HOH 174 2174 2174 HOH HOH A . L 9 HOH 175 2175 2175 HOH HOH A . L 9 HOH 176 2176 2176 HOH HOH A . L 9 HOH 177 2177 2177 HOH HOH A . L 9 HOH 178 2179 2179 HOH HOH A . L 9 HOH 179 2180 2180 HOH HOH A . L 9 HOH 180 2181 2181 HOH HOH A . L 9 HOH 181 2182 2182 HOH HOH A . L 9 HOH 182 2183 2183 HOH HOH A . L 9 HOH 183 2184 2184 HOH HOH A . L 9 HOH 184 2185 2185 HOH HOH A . L 9 HOH 185 2186 2186 HOH HOH A . L 9 HOH 186 2187 2187 HOH HOH A . L 9 HOH 187 2188 2188 HOH HOH A . L 9 HOH 188 2189 2189 HOH HOH A . L 9 HOH 189 2190 2190 HOH HOH A . L 9 HOH 190 2191 2191 HOH HOH A . L 9 HOH 191 2192 2192 HOH HOH A . L 9 HOH 192 2193 2193 HOH HOH A . L 9 HOH 193 2194 2194 HOH HOH A . L 9 HOH 194 2195 2195 HOH HOH A . L 9 HOH 195 2196 2196 HOH HOH A . L 9 HOH 196 2197 2197 HOH HOH A . L 9 HOH 197 2198 2198 HOH HOH A . L 9 HOH 198 2199 2199 HOH HOH A . L 9 HOH 199 2200 2200 HOH HOH A . L 9 HOH 200 2201 2201 HOH HOH A . L 9 HOH 201 2202 2202 HOH HOH A . L 9 HOH 202 2203 2203 HOH HOH A . L 9 HOH 203 2204 2204 HOH HOH A . L 9 HOH 204 2205 2205 HOH HOH A . L 9 HOH 205 2206 2206 HOH HOH A . L 9 HOH 206 2207 2207 HOH HOH A . L 9 HOH 207 2208 2208 HOH HOH A . L 9 HOH 208 2209 2209 HOH HOH A . L 9 HOH 209 2210 2210 HOH HOH A . L 9 HOH 210 2211 2211 HOH HOH A . L 9 HOH 211 2212 2212 HOH HOH A . L 9 HOH 212 2213 2213 HOH HOH A . L 9 HOH 213 2214 2214 HOH HOH A . L 9 HOH 214 2215 2215 HOH HOH A . L 9 HOH 215 2216 2216 HOH HOH A . L 9 HOH 216 2217 2217 HOH HOH A . L 9 HOH 217 2218 2218 HOH HOH A . L 9 HOH 218 2219 2219 HOH HOH A . L 9 HOH 219 2220 2220 HOH HOH A . L 9 HOH 220 2221 2221 HOH HOH A . L 9 HOH 221 2222 2222 HOH HOH A . L 9 HOH 222 2223 2223 HOH HOH A . L 9 HOH 223 2224 2224 HOH HOH A . L 9 HOH 224 2225 2225 HOH HOH A . L 9 HOH 225 2226 2226 HOH HOH A . L 9 HOH 226 2227 2227 HOH HOH A . L 9 HOH 227 2228 2228 HOH HOH A . L 9 HOH 228 2229 2229 HOH HOH A . L 9 HOH 229 2230 2230 HOH HOH A . L 9 HOH 230 2231 2231 HOH HOH A . L 9 HOH 231 2232 2232 HOH HOH A . L 9 HOH 232 2233 2233 HOH HOH A . L 9 HOH 233 2234 2234 HOH HOH A . L 9 HOH 234 2235 2235 HOH HOH A . L 9 HOH 235 2236 2236 HOH HOH A . L 9 HOH 236 2237 2237 HOH HOH A . L 9 HOH 237 2238 2238 HOH HOH A . L 9 HOH 238 2239 2239 HOH HOH A . L 9 HOH 239 2240 2240 HOH HOH A . L 9 HOH 240 2241 2241 HOH HOH A . L 9 HOH 241 2242 2242 HOH HOH A . L 9 HOH 242 2243 2243 HOH HOH A . L 9 HOH 243 2244 2244 HOH HOH A . L 9 HOH 244 2245 2245 HOH HOH A . L 9 HOH 245 2246 2246 HOH HOH A . L 9 HOH 246 2247 2247 HOH HOH A . L 9 HOH 247 2248 2248 HOH HOH A . L 9 HOH 248 2249 2249 HOH HOH A . L 9 HOH 249 2250 2250 HOH HOH A . L 9 HOH 250 2251 2251 HOH HOH A . L 9 HOH 251 2252 2252 HOH HOH A . L 9 HOH 252 2253 2253 HOH HOH A . L 9 HOH 253 2254 2254 HOH HOH A . L 9 HOH 254 2255 2255 HOH HOH A . L 9 HOH 255 2256 2256 HOH HOH A . L 9 HOH 256 2257 2257 HOH HOH A . L 9 HOH 257 2258 2258 HOH HOH A . L 9 HOH 258 2259 2259 HOH HOH A . L 9 HOH 259 2260 2260 HOH HOH A . L 9 HOH 260 2261 2261 HOH HOH A . L 9 HOH 261 2262 2262 HOH HOH A . L 9 HOH 262 2263 2263 HOH HOH A . L 9 HOH 263 2264 2264 HOH HOH A . L 9 HOH 264 2265 2265 HOH HOH A . L 9 HOH 265 2266 2266 HOH HOH A . L 9 HOH 266 2267 2267 HOH HOH A . L 9 HOH 267 2268 2268 HOH HOH A . L 9 HOH 268 2269 2269 HOH HOH A . L 9 HOH 269 2270 2270 HOH HOH A . L 9 HOH 270 2271 2271 HOH HOH A . L 9 HOH 271 2272 2272 HOH HOH A . L 9 HOH 272 2273 2273 HOH HOH A . L 9 HOH 273 2274 2274 HOH HOH A . L 9 HOH 274 2275 2275 HOH HOH A . L 9 HOH 275 2276 2276 HOH HOH A . L 9 HOH 276 2277 2277 HOH HOH A . L 9 HOH 277 2278 2278 HOH HOH A . L 9 HOH 278 2279 2279 HOH HOH A . L 9 HOH 279 2280 2280 HOH HOH A . L 9 HOH 280 2281 2281 HOH HOH A . L 9 HOH 281 2282 2282 HOH HOH A . L 9 HOH 282 2283 2283 HOH HOH A . L 9 HOH 283 2284 2284 HOH HOH A . L 9 HOH 284 2285 2285 HOH HOH A . L 9 HOH 285 2286 2286 HOH HOH A . L 9 HOH 286 2287 2287 HOH HOH A . L 9 HOH 287 2288 2288 HOH HOH A . L 9 HOH 288 2289 2289 HOH HOH A . L 9 HOH 289 2290 2290 HOH HOH A . L 9 HOH 290 2291 2291 HOH HOH A . L 9 HOH 291 2292 2292 HOH HOH A . L 9 HOH 292 2293 2293 HOH HOH A . L 9 HOH 293 2294 2294 HOH HOH A . L 9 HOH 294 2295 2295 HOH HOH A . L 9 HOH 295 2296 2296 HOH HOH A . L 9 HOH 296 2297 2297 HOH HOH A . L 9 HOH 297 2298 2298 HOH HOH A . L 9 HOH 298 2299 2299 HOH HOH A . L 9 HOH 299 2300 2300 HOH HOH A . L 9 HOH 300 2301 2301 HOH HOH A . L 9 HOH 301 2302 2302 HOH HOH A . L 9 HOH 302 2303 2303 HOH HOH A . L 9 HOH 303 2304 2304 HOH HOH A . L 9 HOH 304 2305 2305 HOH HOH A . L 9 HOH 305 2306 2306 HOH HOH A . L 9 HOH 306 2307 2307 HOH HOH A . L 9 HOH 307 2308 2308 HOH HOH A . L 9 HOH 308 2309 2309 HOH HOH A . L 9 HOH 309 2310 2310 HOH HOH A . L 9 HOH 310 2311 2311 HOH HOH A . L 9 HOH 311 2312 2312 HOH HOH A . L 9 HOH 312 2313 2313 HOH HOH A . L 9 HOH 313 2314 2314 HOH HOH A . L 9 HOH 314 2315 2315 HOH HOH A . L 9 HOH 315 2316 2316 HOH HOH A . L 9 HOH 316 2317 2317 HOH HOH A . L 9 HOH 317 2318 2318 HOH HOH A . L 9 HOH 318 2319 2319 HOH HOH A . L 9 HOH 319 2320 2320 HOH HOH A . L 9 HOH 320 2321 2321 HOH HOH A . L 9 HOH 321 2322 2322 HOH HOH A . L 9 HOH 322 2323 2323 HOH HOH A . L 9 HOH 323 2324 2324 HOH HOH A . L 9 HOH 324 2325 2325 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 3 ? NZ ? A LYS 3 NZ 2 1 Y 1 A GLU 31 ? OE1 ? A GLU 31 OE1 3 1 Y 1 A GLU 31 ? OE2 ? A GLU 31 OE2 4 1 Y 1 A GLU 77 ? CG ? A GLU 77 CG 5 1 Y 1 A GLU 77 ? CD ? A GLU 77 CD 6 1 Y 1 A GLU 77 ? OE1 ? A GLU 77 OE1 7 1 Y 1 A GLU 77 ? OE2 ? A GLU 77 OE2 8 1 Y 1 A SER 78 ? OG ? A SER 78 OG 9 1 Y 1 A SER 107 ? N ? A SER 107 N 10 1 Y 1 A SER 107 ? CB ? A SER 107 CB 11 1 Y 1 A SER 107 ? OG ? A SER 107 OG 12 1 Y 1 A LYS 137 ? CD ? A LYS 137 CD 13 1 Y 1 A LYS 137 ? CE ? A LYS 137 CE 14 1 Y 1 A LYS 137 ? NZ ? A LYS 137 NZ 15 1 Y 1 A ARG 149 ? NE ? A ARG 149 NE 16 1 Y 1 A ARG 149 ? CZ ? A ARG 149 CZ 17 1 Y 1 A ARG 149 ? NH1 ? A ARG 149 NH1 18 1 Y 1 A ARG 149 ? NH2 ? A ARG 149 NH2 19 1 Y 1 A LYS 150 ? CD ? A LYS 150 CD 20 1 Y 1 A LYS 150 ? CE ? A LYS 150 CE 21 1 Y 1 A LYS 150 ? NZ ? A LYS 150 NZ 22 1 Y 1 A LYS 183 ? CE ? A LYS 183 CE 23 1 Y 1 A LYS 183 ? NZ ? A LYS 183 NZ 24 1 Y 1 A LYS 194 ? CE ? A LYS 194 CE 25 1 Y 1 A LYS 194 ? NZ ? A LYS 194 NZ 26 1 Y 1 A ILE 242 ? CD1 ? A ILE 242 CD1 27 1 Y 1 A HIS 264 ? CA ? A HIS 264 CA 28 1 Y 1 A HIS 264 ? C ? A HIS 264 C 29 1 Y 1 A HIS 264 ? O ? A HIS 264 O 30 1 Y 1 A HIS 264 ? CB ? A HIS 264 CB 31 1 Y 1 A HIS 264 ? CG ? A HIS 264 CG 32 1 Y 1 A HIS 264 ? ND1 ? A HIS 264 ND1 33 1 Y 1 A HIS 264 ? CD2 ? A HIS 264 CD2 34 1 Y 1 A HIS 264 ? CE1 ? A HIS 264 CE1 35 1 Y 1 A HIS 264 ? NE2 ? A HIS 264 NE2 36 1 N 1 A TMP 431 ? O3P ? G TMP 1 O3P # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.7.0032 ? 1 HKL-2000 'data reduction' . ? 2 HKL-2000 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 4CXO _cell.length_a 53.902 _cell.length_b 66.159 _cell.length_c 98.148 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CXO _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 4CXO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.87 _exptl_crystal.density_percent_sol 57.12 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M HEPES PH 7.5, 0.2 M LI2SO4, 30% (W/V) PEG3350' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2012-12-01 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'LN2-COOLED, FIXED-EXIT DOUBLE CRYSTAL MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSRRC BEAMLINE BL13B1' _diffrn_source.pdbx_synchrotron_site NSRRC _diffrn_source.pdbx_synchrotron_beamline BL13B1 _diffrn_source.pdbx_wavelength 1 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4CXO _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 1.67 _reflns.number_obs 39430 _reflns.number_all ? _reflns.percent_possible_obs 94.8 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 28.90 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 9.9 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.67 _reflns_shell.d_res_low 1.74 _reflns_shell.percent_possible_all 95.7 _reflns_shell.Rmerge_I_obs 0.71 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.20 _reflns_shell.pdbx_redundancy 9.5 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4CXO _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 36995 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.98 _refine.ls_d_res_high 1.67 _refine.ls_percent_reflns_obs 94.60 _refine.ls_R_factor_obs 0.14261 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.14002 _refine.ls_R_factor_R_free 0.19145 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1970 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.974 _refine.correlation_coeff_Fo_to_Fc_free 0.958 _refine.B_iso_mean 27.700 _refine.aniso_B[1][1] -1.23 _refine.aniso_B[2][2] 0.02 _refine.aniso_B[3][3] 1.21 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES REFINED INDIVIDUALLY' _refine.pdbx_starting_model 'PDB ENTRY 4CWM' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.104 _refine.pdbx_overall_ESU_R_Free 0.087 _refine.overall_SU_ML 0.052 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.445 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2014 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 221 _refine_hist.number_atoms_solvent 324 _refine_hist.number_atoms_total 2559 _refine_hist.d_res_high 1.67 _refine_hist.d_res_low 27.98 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.019 ? 2306 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 2003 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.470 2.043 ? 3165 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.821 3.004 ? 4565 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.508 5.000 ? 254 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.916 24.200 ? 100 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.404 15.000 ? 327 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13.294 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.080 0.200 ? 371 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 2444 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 509 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.494 2.422 ? 1018 'X-RAY DIFFRACTION' ? r_mcbond_other 2.493 2.419 ? 1017 'X-RAY DIFFRACTION' ? r_mcangle_it 2.909 3.630 ? 1268 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.375 2.973 ? 1288 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 2.350 3.000 ? 4308 'X-RAY DIFFRACTION' ? r_sphericity_free 30.797 5.000 ? 117 'X-RAY DIFFRACTION' ? r_sphericity_bonded 10.649 5.000 ? 4450 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.674 _refine_ls_shell.d_res_low 1.718 _refine_ls_shell.number_reflns_R_work 2645 _refine_ls_shell.R_factor_R_work 0.155 _refine_ls_shell.percent_reflns_obs 92.89 _refine_ls_shell.R_factor_R_free 0.237 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 137 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 4CXO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4CXO _struct.title 'bifunctional endonuclease in complex with ssDNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4CXO _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'HYDROLASE, ENDONUCLEASES, GLYCOSYLATION, SSDNA BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 5 ? H N N 7 ? I N N 7 ? J N N 7 ? K N N 8 ? L N N 9 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ENDO2_ARATH _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q9C9G4 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4CXO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 263 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9C9G4 _struct_ref_seq.db_align_beg 28 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 290 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 263 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4CXO HIS A 264 ? UNP Q9C9G4 ? ? 'expression tag' 264 1 1 4CXO HIS A 265 ? UNP Q9C9G4 ? ? 'expression tag' 265 2 1 4CXO HIS A 266 ? UNP Q9C9G4 ? ? 'expression tag' 266 3 1 4CXO HIS A 267 ? UNP Q9C9G4 ? ? 'expression tag' 267 4 1 4CXO HIS A 268 ? UNP Q9C9G4 ? ? 'expression tag' 268 5 1 4CXO HIS A 269 ? UNP Q9C9G4 ? ? 'expression tag' 269 6 1 4CXO GLU A 108 ? UNP Q9C9G4 GLN 135 conflict 108 7 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 2 ? THR A 15 ? GLY A 2 THR A 15 1 ? 14 HELX_P HELX_P2 2 ASP A 18 ? LEU A 29 ? ASP A 18 LEU A 29 1 ? 12 HELX_P HELX_P3 3 PRO A 30 ? GLU A 34 ? PRO A 30 GLU A 34 5 ? 5 HELX_P HELX_P4 4 ASP A 36 ? CYS A 41 ? ASP A 36 CYS A 41 5 ? 6 HELX_P HELX_P5 5 LEU A 42 ? LYS A 48 ? LEU A 42 LYS A 48 5 ? 7 HELX_P HELX_P6 6 TYR A 51 ? TYR A 59 ? TYR A 51 TYR A 59 5 ? 9 HELX_P HELX_P7 7 GLN A 69 ? CYS A 74 ? GLN A 69 CYS A 74 1 ? 6 HELX_P HELX_P8 8 CYS A 84 ? LEU A 97 ? CYS A 84 LEU A 97 1 ? 14 HELX_P HELX_P9 9 ASN A 110 ? ILE A 125 ? ASN A 110 ILE A 125 1 ? 16 HELX_P HELX_P10 10 HIS A 126 ? LEU A 129 ? HIS A 126 LEU A 129 5 ? 4 HELX_P HELX_P11 11 SER A 135 ? LYS A 137 ? SER A 135 LYS A 137 5 ? 3 HELX_P HELX_P12 12 LEU A 153 ? SER A 159 ? LEU A 153 SER A 159 1 ? 7 HELX_P HELX_P13 13 SER A 159 ? LEU A 169 ? SER A 159 LEU A 169 1 ? 11 HELX_P HELX_P14 14 ALA A 173 ? GLU A 188 ? ALA A 173 GLU A 188 1 ? 16 HELX_P HELX_P15 15 TRP A 189 ? THR A 198 ? TRP A 189 THR A 198 1 ? 10 HELX_P HELX_P16 16 CYS A 205 ? TRP A 220 ? CYS A 205 TRP A 220 1 ? 16 HELX_P HELX_P17 17 GLU A 232 ? GLY A 263 ? GLU A 232 GLY A 263 1 ? 32 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 10 SG ? ? ? 1_555 A CYS 41 SG ? ? A CYS 10 A CYS 41 1_555 ? ? ? ? ? ? ? 2.023 ? ? disulf2 disulf ? ? A CYS 66 SG ? ? ? 1_555 A CYS 218 SG ? ? A CYS 66 A CYS 218 1_555 ? ? ? ? ? ? ? 2.102 ? ? disulf3 disulf ? ? A CYS 74 SG ? ? ? 1_555 A CYS 84 SG ? ? A CYS 74 A CYS 84 1_555 ? ? ? ? ? ? ? 2.081 ? ? disulf4 disulf ? ? A CYS 199 SG ? ? ? 1_555 A CYS 205 SG ? ? A CYS 199 A CYS 205 1_555 ? ? ? ? ? ? ? 2.039 ? ? covale1 covale one ? A ASN 91 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 91 B NAG 1 1_555 ? ? ? ? ? ? ? 1.437 ? N-Glycosylation covale2 covale one ? A ASN 110 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 110 C NAG 1 1_555 ? ? ? ? ? ? ? 1.446 ? N-Glycosylation covale3 covale one ? A ASN 184 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 184 D NAG 1 1_555 ? ? ? ? ? ? ? 1.448 ? N-Glycosylation covale4 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.436 ? ? covale5 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.431 ? ? covale6 covale both ? B BMA . O3 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 4 1_555 ? ? ? ? ? ? ? 1.441 ? ? covale7 covale both ? B BMA . O6 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 5 1_555 ? ? ? ? ? ? ? 1.441 ? ? covale8 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.428 ? ? covale9 covale both ? C NAG . O4 ? ? ? 1_555 C BMA . C1 ? ? C NAG 2 C BMA 3 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale10 covale both ? C BMA . O3 ? ? ? 1_555 C MAN . C1 ? ? C BMA 3 C MAN 4 1_555 ? ? ? ? ? ? ? 1.444 ? ? covale11 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? D NAG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.435 ? ? covale12 covale both ? D NAG . O4 ? ? ? 1_555 D MAN . C1 ? ? D NAG 2 D MAN 3 1_555 ? ? ? ? ? ? ? 1.443 ? ? metalc1 metalc ? ? A TRP 1 O ? ? ? 1_555 J ZN . ZN ? ? A TRP 1 A ZN 453 1_555 ? ? ? ? ? ? ? 2.282 ? ? metalc2 metalc ? ? A HIS 6 NE2 ? ? ? 1_555 J ZN . ZN ? ? A HIS 6 A ZN 453 1_555 ? ? ? ? ? ? ? 2.010 ? ? metalc3 metalc ? ? A ASP 45 OD1 ? ? ? 1_555 H ZN . ZN ? ? A ASP 45 A ZN 451 1_555 ? ? ? ? ? ? ? 2.454 ? ? metalc4 metalc ? ? A HIS 58 ND1 ? ? ? 1_555 H ZN . ZN ? ? A HIS 58 A ZN 451 1_555 ? ? ? ? ? ? ? 2.152 ? ? metalc5 metalc ? ? A HIS 120 NE2 ? ? ? 1_555 H ZN . ZN ? ? A HIS 120 A ZN 451 1_555 ? ? ? ? ? ? ? 2.225 ? ? metalc6 metalc ? ? A ASP 124 OD2 ? ? ? 1_555 H ZN . ZN ? ? A ASP 124 A ZN 451 1_555 ? ? ? ? ? ? ? 2.151 ? ? metalc7 metalc ? ? A ASP 124 OD1 ? ? ? 1_555 J ZN . ZN ? ? A ASP 124 A ZN 453 1_555 ? ? ? ? ? ? ? 2.068 ? ? metalc8 metalc ? ? A HIS 130 NE2 ? ? ? 1_555 I ZN . ZN ? ? A HIS 130 A ZN 452 1_555 ? ? ? ? ? ? ? 2.159 ? ? metalc9 metalc ? ? A HIS 154 NE2 ? ? ? 1_555 I ZN . ZN ? ? A HIS 154 A ZN 452 1_555 ? ? ? ? ? ? ? 2.148 ? ? metalc10 metalc ? ? A ASP 158 OD2 ? ? ? 1_555 I ZN . ZN ? ? A ASP 158 A ZN 452 1_555 ? ? ? ? ? ? ? 2.165 ? ? metalc11 metalc ? ? A ASP 158 OD1 ? ? ? 1_555 I ZN . ZN ? ? A ASP 158 A ZN 452 1_555 ? ? ? ? ? ? ? 2.470 ? ? metalc12 metalc ? ? E TMP . "O3'" ? ? ? 1_555 I ZN . ZN ? ? A TMP 401 A ZN 452 1_555 ? ? ? ? ? ? ? 2.094 ? ? metalc13 metalc ? ? H ZN . ZN ? ? ? 1_555 K SO4 . O2 ? ? A ZN 451 A SO4 461 1_555 ? ? ? ? ? ? ? 2.350 ? ? metalc14 metalc ? ? H ZN . ZN ? ? ? 1_555 K SO4 . S ? ? A ZN 451 A SO4 461 1_555 ? ? ? ? ? ? ? 2.741 ? ? metalc15 metalc ? ? H ZN . ZN ? ? ? 1_555 K SO4 . O4 ? ? A ZN 451 A SO4 461 1_555 ? ? ? ? ? ? ? 2.088 ? ? metalc16 metalc ? ? I ZN . ZN ? ? ? 1_555 K SO4 . O3 ? ? A ZN 452 A SO4 461 1_555 ? ? ? ? ? ? ? 2.142 ? ? metalc17 metalc ? ? J ZN . ZN ? ? ? 1_555 K SO4 . O4 ? ? A ZN 453 A SO4 461 1_555 ? ? ? ? ? ? ? 1.883 ? ? metalc18 metalc ? ? J ZN . ZN ? ? ? 1_555 K SO4 . S ? ? A ZN 453 A SO4 461 1_555 ? ? ? ? ? ? ? 2.993 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A TRP 1 ? A TRP 1 ? 1_555 ZN ? J ZN . ? A ZN 453 ? 1_555 NE2 ? A HIS 6 ? A HIS 6 ? 1_555 90.5 ? 2 O ? A TRP 1 ? A TRP 1 ? 1_555 ZN ? J ZN . ? A ZN 453 ? 1_555 OD1 ? A ASP 124 ? A ASP 124 ? 1_555 167.4 ? 3 NE2 ? A HIS 6 ? A HIS 6 ? 1_555 ZN ? J ZN . ? A ZN 453 ? 1_555 OD1 ? A ASP 124 ? A ASP 124 ? 1_555 94.4 ? 4 O ? A TRP 1 ? A TRP 1 ? 1_555 ZN ? J ZN . ? A ZN 453 ? 1_555 O4 ? K SO4 . ? A SO4 461 ? 1_555 91.6 ? 5 NE2 ? A HIS 6 ? A HIS 6 ? 1_555 ZN ? J ZN . ? A ZN 453 ? 1_555 O4 ? K SO4 . ? A SO4 461 ? 1_555 117.6 ? 6 OD1 ? A ASP 124 ? A ASP 124 ? 1_555 ZN ? J ZN . ? A ZN 453 ? 1_555 O4 ? K SO4 . ? A SO4 461 ? 1_555 96.5 ? 7 O ? A TRP 1 ? A TRP 1 ? 1_555 ZN ? J ZN . ? A ZN 453 ? 1_555 S ? K SO4 . ? A SO4 461 ? 1_555 80.9 ? 8 NE2 ? A HIS 6 ? A HIS 6 ? 1_555 ZN ? J ZN . ? A ZN 453 ? 1_555 S ? K SO4 . ? A SO4 461 ? 1_555 139.4 ? 9 OD1 ? A ASP 124 ? A ASP 124 ? 1_555 ZN ? J ZN . ? A ZN 453 ? 1_555 S ? K SO4 . ? A SO4 461 ? 1_555 102.7 ? 10 O4 ? K SO4 . ? A SO4 461 ? 1_555 ZN ? J ZN . ? A ZN 453 ? 1_555 S ? K SO4 . ? A SO4 461 ? 1_555 24.9 ? 11 OD1 ? A ASP 45 ? A ASP 45 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 ND1 ? A HIS 58 ? A HIS 58 ? 1_555 88.7 ? 12 OD1 ? A ASP 45 ? A ASP 45 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 81.4 ? 13 ND1 ? A HIS 58 ? A HIS 58 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 96.9 ? 14 OD1 ? A ASP 45 ? A ASP 45 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 OD2 ? A ASP 124 ? A ASP 124 ? 1_555 170.7 ? 15 ND1 ? A HIS 58 ? A HIS 58 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 OD2 ? A ASP 124 ? A ASP 124 ? 1_555 93.3 ? 16 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 OD2 ? A ASP 124 ? A ASP 124 ? 1_555 89.3 ? 17 OD1 ? A ASP 45 ? A ASP 45 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 O2 ? K SO4 . ? A SO4 461 ? 1_555 85.1 ? 18 ND1 ? A HIS 58 ? A HIS 58 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 O2 ? K SO4 . ? A SO4 461 ? 1_555 101.8 ? 19 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 O2 ? K SO4 . ? A SO4 461 ? 1_555 156.7 ? 20 OD2 ? A ASP 124 ? A ASP 124 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 O2 ? K SO4 . ? A SO4 461 ? 1_555 103.4 ? 21 OD1 ? A ASP 45 ? A ASP 45 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 S ? K SO4 . ? A SO4 461 ? 1_555 82.8 ? 22 ND1 ? A HIS 58 ? A HIS 58 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 S ? K SO4 . ? A SO4 461 ? 1_555 135.2 ? 23 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 S ? K SO4 . ? A SO4 461 ? 1_555 124.8 ? 24 OD2 ? A ASP 124 ? A ASP 124 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 S ? K SO4 . ? A SO4 461 ? 1_555 102.0 ? 25 O2 ? K SO4 . ? A SO4 461 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 S ? K SO4 . ? A SO4 461 ? 1_555 33.9 ? 26 OD1 ? A ASP 45 ? A ASP 45 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 O4 ? K SO4 . ? A SO4 461 ? 1_555 88.1 ? 27 ND1 ? A HIS 58 ? A HIS 58 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 O4 ? K SO4 . ? A SO4 461 ? 1_555 168.2 ? 28 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 O4 ? K SO4 . ? A SO4 461 ? 1_555 93.8 ? 29 OD2 ? A ASP 124 ? A ASP 124 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 O4 ? K SO4 . ? A SO4 461 ? 1_555 91.8 ? 30 O2 ? K SO4 . ? A SO4 461 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 O4 ? K SO4 . ? A SO4 461 ? 1_555 66.6 ? 31 S ? K SO4 . ? A SO4 461 ? 1_555 ZN ? H ZN . ? A ZN 451 ? 1_555 O4 ? K SO4 . ? A SO4 461 ? 1_555 33.0 ? 32 NE2 ? A HIS 130 ? A HIS 130 ? 1_555 ZN ? I ZN . ? A ZN 452 ? 1_555 NE2 ? A HIS 154 ? A HIS 154 ? 1_555 97.1 ? 33 NE2 ? A HIS 130 ? A HIS 130 ? 1_555 ZN ? I ZN . ? A ZN 452 ? 1_555 OD2 ? A ASP 158 ? A ASP 158 ? 1_555 148.6 ? 34 NE2 ? A HIS 154 ? A HIS 154 ? 1_555 ZN ? I ZN . ? A ZN 452 ? 1_555 OD2 ? A ASP 158 ? A ASP 158 ? 1_555 87.9 ? 35 NE2 ? A HIS 130 ? A HIS 130 ? 1_555 ZN ? I ZN . ? A ZN 452 ? 1_555 OD1 ? A ASP 158 ? A ASP 158 ? 1_555 92.7 ? 36 NE2 ? A HIS 154 ? A HIS 154 ? 1_555 ZN ? I ZN . ? A ZN 452 ? 1_555 OD1 ? A ASP 158 ? A ASP 158 ? 1_555 94.7 ? 37 OD2 ? A ASP 158 ? A ASP 158 ? 1_555 ZN ? I ZN . ? A ZN 452 ? 1_555 OD1 ? A ASP 158 ? A ASP 158 ? 1_555 55.9 ? 38 NE2 ? A HIS 130 ? A HIS 130 ? 1_555 ZN ? I ZN . ? A ZN 452 ? 1_555 "O3'" ? E TMP . ? A TMP 401 ? 1_555 105.8 ? 39 NE2 ? A HIS 154 ? A HIS 154 ? 1_555 ZN ? I ZN . ? A ZN 452 ? 1_555 "O3'" ? E TMP . ? A TMP 401 ? 1_555 93.3 ? 40 OD2 ? A ASP 158 ? A ASP 158 ? 1_555 ZN ? I ZN . ? A ZN 452 ? 1_555 "O3'" ? E TMP . ? A TMP 401 ? 1_555 104.8 ? 41 OD1 ? A ASP 158 ? A ASP 158 ? 1_555 ZN ? I ZN . ? A ZN 452 ? 1_555 "O3'" ? E TMP . ? A TMP 401 ? 1_555 158.7 ? 42 NE2 ? A HIS 130 ? A HIS 130 ? 1_555 ZN ? I ZN . ? A ZN 452 ? 1_555 O3 ? K SO4 . ? A SO4 461 ? 1_555 87.8 ? 43 NE2 ? A HIS 154 ? A HIS 154 ? 1_555 ZN ? I ZN . ? A ZN 452 ? 1_555 O3 ? K SO4 . ? A SO4 461 ? 1_555 173.0 ? 44 OD2 ? A ASP 158 ? A ASP 158 ? 1_555 ZN ? I ZN . ? A ZN 452 ? 1_555 O3 ? K SO4 . ? A SO4 461 ? 1_555 90.4 ? 45 OD1 ? A ASP 158 ? A ASP 158 ? 1_555 ZN ? I ZN . ? A ZN 452 ? 1_555 O3 ? K SO4 . ? A SO4 461 ? 1_555 90.0 ? 46 "O3'" ? E TMP . ? A TMP 401 ? 1_555 ZN ? I ZN . ? A ZN 452 ? 1_555 O3 ? K SO4 . ? A SO4 461 ? 1_555 80.5 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG B . ? ASN A 91 ? NAG B 1 ? 1_555 ASN A 91 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG C . ? ASN A 110 ? NAG C 1 ? 1_555 ASN A 110 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 NAG D . ? ASN A 184 ? NAG D 1 ? 1_555 ASN A 184 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 4 CYS A 10 ? CYS A 41 ? CYS A 10 ? 1_555 CYS A 41 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 66 ? CYS A 218 ? CYS A 66 ? 1_555 CYS A 218 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS A 74 ? CYS A 84 ? CYS A 74 ? 1_555 CYS A 84 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS A 199 ? CYS A 205 ? CYS A 199 ? 1_555 CYS A 205 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AB 1 2 ? anti-parallel AB 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ILE A 60 ? THR A 62 ? ILE A 60 THR A 62 AA 2 VAL A 131 ? TYR A 133 ? VAL A 131 TYR A 133 AB 1 ARG A 149 ? ASN A 152 ? ARG A 149 ASN A 152 AB 2 GLU A 143 ? TRP A 146 ? GLU A 143 TRP A 146 AB 3 THR A 230 ? LEU A 231 ? THR A 230 LEU A 231 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N THR A 62 ? N THR A 62 O SER A 132 ? O SER A 132 AB 1 2 N ALA A 151 ? N ALA A 151 O VAL A 144 ? O VAL A 144 AB 2 3 O HIS A 145 ? O HIS A 145 N LEU A 231 ? N LEU A 231 # _pdbx_entry_details.entry_id 4CXO _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;THYMIDINE-5'-PHOSPHATE (TMP): PART OF THE AAAAAT SSDNA MOLECULES ALPHA-D-MANNOSE (MAN): PART OF THE N-GLYCANS ZINC ION (ZN2): TRINUCLEAR METAL CLUSTER AT THE ACTIVE CENTER 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE (D5M): PART OF THE AAAAAT SSDNA MOLECULE IN THE SECONDARY DNA BINDING SITE N-ACETYL-D-GLUCOSAMINE (NAG): PART OF THE N-GLYCANS ; _pdbx_entry_details.sequence_details 'OUR SEQUENCE CONTAINS A C-TERMINAL HISTIDINE TAG' _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 "O3'" A D5M 430 ? ? P A TMP 431 ? ? 2.06 2 1 O2 B MAN 4 ? ? O A HOH 2290 ? ? 2.12 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 51 ? ? -111.95 78.39 2 1 TYR A 147 ? ? 50.38 -118.96 3 1 SER A 159 ? ? -140.61 -48.28 4 1 GLU A 227 ? ? -36.06 126.35 5 1 GLU A 232 ? ? -141.72 -136.66 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 91 A ASN 91 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 110 A ASN 110 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 184 A ASN 184 ? ASN 'GLYCOSYLATION SITE' # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 2018 ? 5.93 . 2 1 O ? A HOH 2022 ? 6.11 . 3 1 O ? A HOH 2056 ? 6.15 . 4 1 O ? A HOH 2182 ? . 7.11 5 1 O ? A HOH 2321 ? 6.02 . 6 1 O ? A HOH 2322 ? 8.09 . 7 1 O ? A HOH 2323 ? . 6.73 8 1 O ? A HOH 2324 ? 7.13 . 9 1 O ? A HOH 2325 ? 7.03 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 100 ? A LYS 100 2 1 Y 1 A THR 101 ? A THR 101 3 1 Y 1 A ALA 102 ? A ALA 102 4 1 Y 1 A ALA 103 ? A ALA 103 5 1 Y 1 A SER 104 ? A SER 104 6 1 Y 1 A SER 105 ? A SER 105 7 1 Y 1 A GLN 106 ? A GLN 106 8 1 Y 1 A LYS 202 ? A LYS 202 9 1 Y 1 A HIS 265 ? A HIS 265 10 1 Y 1 A HIS 266 ? A HIS 266 11 1 Y 1 A HIS 267 ? A HIS 267 12 1 Y 1 A HIS 268 ? A HIS 268 13 1 Y 1 A HIS 269 ? A HIS 269 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 D5M "O5'" O N N 112 D5M "C5'" C N N 113 D5M "C4'" C N R 114 D5M "O4'" O N N 115 D5M "C3'" C N S 116 D5M "O3'" O N N 117 D5M "C2'" C N N 118 D5M "C1'" C N R 119 D5M N9 N Y N 120 D5M C8 C Y N 121 D5M N7 N Y N 122 D5M C5 C Y N 123 D5M C6 C Y N 124 D5M N6 N N N 125 D5M N1 N Y N 126 D5M C2 C Y N 127 D5M N3 N Y N 128 D5M C4 C Y N 129 D5M P P N N 130 D5M O1P O N N 131 D5M O3P O N N 132 D5M O2P O N N 133 D5M "H5'1" H N N 134 D5M "H5'2" H N N 135 D5M "H4'" H N N 136 D5M H1 H N N 137 D5M "H3'" H N N 138 D5M "H2'1" H N N 139 D5M "H2'2" H N N 140 D5M "H1'" H N N 141 D5M H8 H N N 142 D5M HN61 H N N 143 D5M HN62 H N N 144 D5M H2 H N N 145 D5M H3P H N N 146 D5M H2P H N N 147 GLN N N N N 148 GLN CA C N S 149 GLN C C N N 150 GLN O O N N 151 GLN CB C N N 152 GLN CG C N N 153 GLN CD C N N 154 GLN OE1 O N N 155 GLN NE2 N N N 156 GLN OXT O N N 157 GLN H H N N 158 GLN H2 H N N 159 GLN HA H N N 160 GLN HB2 H N N 161 GLN HB3 H N N 162 GLN HG2 H N N 163 GLN HG3 H N N 164 GLN HE21 H N N 165 GLN HE22 H N N 166 GLN HXT H N N 167 GLU N N N N 168 GLU CA C N S 169 GLU C C N N 170 GLU O O N N 171 GLU CB C N N 172 GLU CG C N N 173 GLU CD C N N 174 GLU OE1 O N N 175 GLU OE2 O N N 176 GLU OXT O N N 177 GLU H H N N 178 GLU H2 H N N 179 GLU HA H N N 180 GLU HB2 H N N 181 GLU HB3 H N N 182 GLU HG2 H N N 183 GLU HG3 H N N 184 GLU HE2 H N N 185 GLU HXT H N N 186 GLY N N N N 187 GLY CA C N N 188 GLY C C N N 189 GLY O O N N 190 GLY OXT O N N 191 GLY H H N N 192 GLY H2 H N N 193 GLY HA2 H N N 194 GLY HA3 H N N 195 GLY HXT H N N 196 HIS N N N N 197 HIS CA C N S 198 HIS C C N N 199 HIS O O N N 200 HIS CB C N N 201 HIS CG C Y N 202 HIS ND1 N Y N 203 HIS CD2 C Y N 204 HIS CE1 C Y N 205 HIS NE2 N Y N 206 HIS OXT O N N 207 HIS H H N N 208 HIS H2 H N N 209 HIS HA H N N 210 HIS HB2 H N N 211 HIS HB3 H N N 212 HIS HD1 H N N 213 HIS HD2 H N N 214 HIS HE1 H N N 215 HIS HE2 H N N 216 HIS HXT H N N 217 HOH O O N N 218 HOH H1 H N N 219 HOH H2 H N N 220 ILE N N N N 221 ILE CA C N S 222 ILE C C N N 223 ILE O O N N 224 ILE CB C N S 225 ILE CG1 C N N 226 ILE CG2 C N N 227 ILE CD1 C N N 228 ILE OXT O N N 229 ILE H H N N 230 ILE H2 H N N 231 ILE HA H N N 232 ILE HB H N N 233 ILE HG12 H N N 234 ILE HG13 H N N 235 ILE HG21 H N N 236 ILE HG22 H N N 237 ILE HG23 H N N 238 ILE HD11 H N N 239 ILE HD12 H N N 240 ILE HD13 H N N 241 ILE HXT H N N 242 LEU N N N N 243 LEU CA C N S 244 LEU C C N N 245 LEU O O N N 246 LEU CB C N N 247 LEU CG C N N 248 LEU CD1 C N N 249 LEU CD2 C N N 250 LEU OXT O N N 251 LEU H H N N 252 LEU H2 H N N 253 LEU HA H N N 254 LEU HB2 H N N 255 LEU HB3 H N N 256 LEU HG H N N 257 LEU HD11 H N N 258 LEU HD12 H N N 259 LEU HD13 H N N 260 LEU HD21 H N N 261 LEU HD22 H N N 262 LEU HD23 H N N 263 LEU HXT H N N 264 LYS N N N N 265 LYS CA C N S 266 LYS C C N N 267 LYS O O N N 268 LYS CB C N N 269 LYS CG C N N 270 LYS CD C N N 271 LYS CE C N N 272 LYS NZ N N N 273 LYS OXT O N N 274 LYS H H N N 275 LYS H2 H N N 276 LYS HA H N N 277 LYS HB2 H N N 278 LYS HB3 H N N 279 LYS HG2 H N N 280 LYS HG3 H N N 281 LYS HD2 H N N 282 LYS HD3 H N N 283 LYS HE2 H N N 284 LYS HE3 H N N 285 LYS HZ1 H N N 286 LYS HZ2 H N N 287 LYS HZ3 H N N 288 LYS HXT H N N 289 MAN C1 C N S 290 MAN C2 C N S 291 MAN C3 C N S 292 MAN C4 C N S 293 MAN C5 C N R 294 MAN C6 C N N 295 MAN O1 O N N 296 MAN O2 O N N 297 MAN O3 O N N 298 MAN O4 O N N 299 MAN O5 O N N 300 MAN O6 O N N 301 MAN H1 H N N 302 MAN H2 H N N 303 MAN H3 H N N 304 MAN H4 H N N 305 MAN H5 H N N 306 MAN H61 H N N 307 MAN H62 H N N 308 MAN HO1 H N N 309 MAN HO2 H N N 310 MAN HO3 H N N 311 MAN HO4 H N N 312 MAN HO6 H N N 313 MET N N N N 314 MET CA C N S 315 MET C C N N 316 MET O O N N 317 MET CB C N N 318 MET CG C N N 319 MET SD S N N 320 MET CE C N N 321 MET OXT O N N 322 MET H H N N 323 MET H2 H N N 324 MET HA H N N 325 MET HB2 H N N 326 MET HB3 H N N 327 MET HG2 H N N 328 MET HG3 H N N 329 MET HE1 H N N 330 MET HE2 H N N 331 MET HE3 H N N 332 MET HXT H N N 333 NAG C1 C N R 334 NAG C2 C N R 335 NAG C3 C N R 336 NAG C4 C N S 337 NAG C5 C N R 338 NAG C6 C N N 339 NAG C7 C N N 340 NAG C8 C N N 341 NAG N2 N N N 342 NAG O1 O N N 343 NAG O3 O N N 344 NAG O4 O N N 345 NAG O5 O N N 346 NAG O6 O N N 347 NAG O7 O N N 348 NAG H1 H N N 349 NAG H2 H N N 350 NAG H3 H N N 351 NAG H4 H N N 352 NAG H5 H N N 353 NAG H61 H N N 354 NAG H62 H N N 355 NAG H81 H N N 356 NAG H82 H N N 357 NAG H83 H N N 358 NAG HN2 H N N 359 NAG HO1 H N N 360 NAG HO3 H N N 361 NAG HO4 H N N 362 NAG HO6 H N N 363 PHE N N N N 364 PHE CA C N S 365 PHE C C N N 366 PHE O O N N 367 PHE CB C N N 368 PHE CG C Y N 369 PHE CD1 C Y N 370 PHE CD2 C Y N 371 PHE CE1 C Y N 372 PHE CE2 C Y N 373 PHE CZ C Y N 374 PHE OXT O N N 375 PHE H H N N 376 PHE H2 H N N 377 PHE HA H N N 378 PHE HB2 H N N 379 PHE HB3 H N N 380 PHE HD1 H N N 381 PHE HD2 H N N 382 PHE HE1 H N N 383 PHE HE2 H N N 384 PHE HZ H N N 385 PHE HXT H N N 386 PRO N N N N 387 PRO CA C N S 388 PRO C C N N 389 PRO O O N N 390 PRO CB C N N 391 PRO CG C N N 392 PRO CD C N N 393 PRO OXT O N N 394 PRO H H N N 395 PRO HA H N N 396 PRO HB2 H N N 397 PRO HB3 H N N 398 PRO HG2 H N N 399 PRO HG3 H N N 400 PRO HD2 H N N 401 PRO HD3 H N N 402 PRO HXT H N N 403 SER N N N N 404 SER CA C N S 405 SER C C N N 406 SER O O N N 407 SER CB C N N 408 SER OG O N N 409 SER OXT O N N 410 SER H H N N 411 SER H2 H N N 412 SER HA H N N 413 SER HB2 H N N 414 SER HB3 H N N 415 SER HG H N N 416 SER HXT H N N 417 SO4 S S N N 418 SO4 O1 O N N 419 SO4 O2 O N N 420 SO4 O3 O N N 421 SO4 O4 O N N 422 THR N N N N 423 THR CA C N S 424 THR C C N N 425 THR O O N N 426 THR CB C N R 427 THR OG1 O N N 428 THR CG2 C N N 429 THR OXT O N N 430 THR H H N N 431 THR H2 H N N 432 THR HA H N N 433 THR HB H N N 434 THR HG1 H N N 435 THR HG21 H N N 436 THR HG22 H N N 437 THR HG23 H N N 438 THR HXT H N N 439 TMP P P N N 440 TMP O1P O N N 441 TMP O2P O N N 442 TMP O3P O N N 443 TMP "O5'" O N N 444 TMP "C5'" C N N 445 TMP "C4'" C N R 446 TMP "O4'" O N N 447 TMP "C3'" C N S 448 TMP "O3'" O N N 449 TMP "C2'" C N N 450 TMP "C1'" C N R 451 TMP N1 N N N 452 TMP C2 C N N 453 TMP O2 O N N 454 TMP N3 N N N 455 TMP C4 C N N 456 TMP O4 O N N 457 TMP C5 C N N 458 TMP C5M C N N 459 TMP C6 C N N 460 TMP HOP2 H N N 461 TMP HOP3 H N N 462 TMP "H5'1" H N N 463 TMP "H5'2" H N N 464 TMP "H4'" H N N 465 TMP "H3'" H N N 466 TMP "HO3'" H N N 467 TMP "H2'1" H N N 468 TMP "H2'2" H N N 469 TMP "H1'" H N N 470 TMP HN3 H N N 471 TMP H51 H N N 472 TMP H52 H N N 473 TMP H53 H N N 474 TMP H6 H N N 475 TRP N N N N 476 TRP CA C N S 477 TRP C C N N 478 TRP O O N N 479 TRP CB C N N 480 TRP CG C Y N 481 TRP CD1 C Y N 482 TRP CD2 C Y N 483 TRP NE1 N Y N 484 TRP CE2 C Y N 485 TRP CE3 C Y N 486 TRP CZ2 C Y N 487 TRP CZ3 C Y N 488 TRP CH2 C Y N 489 TRP OXT O N N 490 TRP H H N N 491 TRP H2 H N N 492 TRP HA H N N 493 TRP HB2 H N N 494 TRP HB3 H N N 495 TRP HD1 H N N 496 TRP HE1 H N N 497 TRP HE3 H N N 498 TRP HZ2 H N N 499 TRP HZ3 H N N 500 TRP HH2 H N N 501 TRP HXT H N N 502 TYR N N N N 503 TYR CA C N S 504 TYR C C N N 505 TYR O O N N 506 TYR CB C N N 507 TYR CG C Y N 508 TYR CD1 C Y N 509 TYR CD2 C Y N 510 TYR CE1 C Y N 511 TYR CE2 C Y N 512 TYR CZ C Y N 513 TYR OH O N N 514 TYR OXT O N N 515 TYR H H N N 516 TYR H2 H N N 517 TYR HA H N N 518 TYR HB2 H N N 519 TYR HB3 H N N 520 TYR HD1 H N N 521 TYR HD2 H N N 522 TYR HE1 H N N 523 TYR HE2 H N N 524 TYR HH H N N 525 TYR HXT H N N 526 VAL N N N N 527 VAL CA C N S 528 VAL C C N N 529 VAL O O N N 530 VAL CB C N N 531 VAL CG1 C N N 532 VAL CG2 C N N 533 VAL OXT O N N 534 VAL H H N N 535 VAL H2 H N N 536 VAL HA H N N 537 VAL HB H N N 538 VAL HG11 H N N 539 VAL HG12 H N N 540 VAL HG13 H N N 541 VAL HG21 H N N 542 VAL HG22 H N N 543 VAL HG23 H N N 544 VAL HXT H N N 545 ZN ZN ZN N N 546 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 D5M "O5'" "C5'" sing N N 107 D5M "O5'" P sing N N 108 D5M "C5'" "C4'" sing N N 109 D5M "C5'" "H5'1" sing N N 110 D5M "C5'" "H5'2" sing N N 111 D5M "C4'" "O4'" sing N N 112 D5M "C4'" "C3'" sing N N 113 D5M "C4'" "H4'" sing N N 114 D5M "O4'" "C1'" sing N N 115 D5M "C3'" "O3'" sing N N 116 D5M "C3'" "C2'" sing N N 117 D5M "C3'" H1 sing N N 118 D5M "O3'" "H3'" sing N N 119 D5M "C2'" "C1'" sing N N 120 D5M "C2'" "H2'1" sing N N 121 D5M "C2'" "H2'2" sing N N 122 D5M "C1'" N9 sing N N 123 D5M "C1'" "H1'" sing N N 124 D5M N9 C8 sing Y N 125 D5M N9 C4 sing Y N 126 D5M C8 N7 doub Y N 127 D5M C8 H8 sing N N 128 D5M N7 C5 sing Y N 129 D5M C5 C6 sing Y N 130 D5M C5 C4 doub Y N 131 D5M C6 N6 sing N N 132 D5M C6 N1 doub Y N 133 D5M N6 HN61 sing N N 134 D5M N6 HN62 sing N N 135 D5M N1 C2 sing Y N 136 D5M C2 N3 doub Y N 137 D5M C2 H2 sing N N 138 D5M N3 C4 sing Y N 139 D5M P O1P doub N N 140 D5M P O3P sing N N 141 D5M P O2P sing N N 142 D5M O3P H3P sing N N 143 D5M O2P H2P sing N N 144 GLN N CA sing N N 145 GLN N H sing N N 146 GLN N H2 sing N N 147 GLN CA C sing N N 148 GLN CA CB sing N N 149 GLN CA HA sing N N 150 GLN C O doub N N 151 GLN C OXT sing N N 152 GLN CB CG sing N N 153 GLN CB HB2 sing N N 154 GLN CB HB3 sing N N 155 GLN CG CD sing N N 156 GLN CG HG2 sing N N 157 GLN CG HG3 sing N N 158 GLN CD OE1 doub N N 159 GLN CD NE2 sing N N 160 GLN NE2 HE21 sing N N 161 GLN NE2 HE22 sing N N 162 GLN OXT HXT sing N N 163 GLU N CA sing N N 164 GLU N H sing N N 165 GLU N H2 sing N N 166 GLU CA C sing N N 167 GLU CA CB sing N N 168 GLU CA HA sing N N 169 GLU C O doub N N 170 GLU C OXT sing N N 171 GLU CB CG sing N N 172 GLU CB HB2 sing N N 173 GLU CB HB3 sing N N 174 GLU CG CD sing N N 175 GLU CG HG2 sing N N 176 GLU CG HG3 sing N N 177 GLU CD OE1 doub N N 178 GLU CD OE2 sing N N 179 GLU OE2 HE2 sing N N 180 GLU OXT HXT sing N N 181 GLY N CA sing N N 182 GLY N H sing N N 183 GLY N H2 sing N N 184 GLY CA C sing N N 185 GLY CA HA2 sing N N 186 GLY CA HA3 sing N N 187 GLY C O doub N N 188 GLY C OXT sing N N 189 GLY OXT HXT sing N N 190 HIS N CA sing N N 191 HIS N H sing N N 192 HIS N H2 sing N N 193 HIS CA C sing N N 194 HIS CA CB sing N N 195 HIS CA HA sing N N 196 HIS C O doub N N 197 HIS C OXT sing N N 198 HIS CB CG sing N N 199 HIS CB HB2 sing N N 200 HIS CB HB3 sing N N 201 HIS CG ND1 sing Y N 202 HIS CG CD2 doub Y N 203 HIS ND1 CE1 doub Y N 204 HIS ND1 HD1 sing N N 205 HIS CD2 NE2 sing Y N 206 HIS CD2 HD2 sing N N 207 HIS CE1 NE2 sing Y N 208 HIS CE1 HE1 sing N N 209 HIS NE2 HE2 sing N N 210 HIS OXT HXT sing N N 211 HOH O H1 sing N N 212 HOH O H2 sing N N 213 ILE N CA sing N N 214 ILE N H sing N N 215 ILE N H2 sing N N 216 ILE CA C sing N N 217 ILE CA CB sing N N 218 ILE CA HA sing N N 219 ILE C O doub N N 220 ILE C OXT sing N N 221 ILE CB CG1 sing N N 222 ILE CB CG2 sing N N 223 ILE CB HB sing N N 224 ILE CG1 CD1 sing N N 225 ILE CG1 HG12 sing N N 226 ILE CG1 HG13 sing N N 227 ILE CG2 HG21 sing N N 228 ILE CG2 HG22 sing N N 229 ILE CG2 HG23 sing N N 230 ILE CD1 HD11 sing N N 231 ILE CD1 HD12 sing N N 232 ILE CD1 HD13 sing N N 233 ILE OXT HXT sing N N 234 LEU N CA sing N N 235 LEU N H sing N N 236 LEU N H2 sing N N 237 LEU CA C sing N N 238 LEU CA CB sing N N 239 LEU CA HA sing N N 240 LEU C O doub N N 241 LEU C OXT sing N N 242 LEU CB CG sing N N 243 LEU CB HB2 sing N N 244 LEU CB HB3 sing N N 245 LEU CG CD1 sing N N 246 LEU CG CD2 sing N N 247 LEU CG HG sing N N 248 LEU CD1 HD11 sing N N 249 LEU CD1 HD12 sing N N 250 LEU CD1 HD13 sing N N 251 LEU CD2 HD21 sing N N 252 LEU CD2 HD22 sing N N 253 LEU CD2 HD23 sing N N 254 LEU OXT HXT sing N N 255 LYS N CA sing N N 256 LYS N H sing N N 257 LYS N H2 sing N N 258 LYS CA C sing N N 259 LYS CA CB sing N N 260 LYS CA HA sing N N 261 LYS C O doub N N 262 LYS C OXT sing N N 263 LYS CB CG sing N N 264 LYS CB HB2 sing N N 265 LYS CB HB3 sing N N 266 LYS CG CD sing N N 267 LYS CG HG2 sing N N 268 LYS CG HG3 sing N N 269 LYS CD CE sing N N 270 LYS CD HD2 sing N N 271 LYS CD HD3 sing N N 272 LYS CE NZ sing N N 273 LYS CE HE2 sing N N 274 LYS CE HE3 sing N N 275 LYS NZ HZ1 sing N N 276 LYS NZ HZ2 sing N N 277 LYS NZ HZ3 sing N N 278 LYS OXT HXT sing N N 279 MAN C1 C2 sing N N 280 MAN C1 O1 sing N N 281 MAN C1 O5 sing N N 282 MAN C1 H1 sing N N 283 MAN C2 C3 sing N N 284 MAN C2 O2 sing N N 285 MAN C2 H2 sing N N 286 MAN C3 C4 sing N N 287 MAN C3 O3 sing N N 288 MAN C3 H3 sing N N 289 MAN C4 C5 sing N N 290 MAN C4 O4 sing N N 291 MAN C4 H4 sing N N 292 MAN C5 C6 sing N N 293 MAN C5 O5 sing N N 294 MAN C5 H5 sing N N 295 MAN C6 O6 sing N N 296 MAN C6 H61 sing N N 297 MAN C6 H62 sing N N 298 MAN O1 HO1 sing N N 299 MAN O2 HO2 sing N N 300 MAN O3 HO3 sing N N 301 MAN O4 HO4 sing N N 302 MAN O6 HO6 sing N N 303 MET N CA sing N N 304 MET N H sing N N 305 MET N H2 sing N N 306 MET CA C sing N N 307 MET CA CB sing N N 308 MET CA HA sing N N 309 MET C O doub N N 310 MET C OXT sing N N 311 MET CB CG sing N N 312 MET CB HB2 sing N N 313 MET CB HB3 sing N N 314 MET CG SD sing N N 315 MET CG HG2 sing N N 316 MET CG HG3 sing N N 317 MET SD CE sing N N 318 MET CE HE1 sing N N 319 MET CE HE2 sing N N 320 MET CE HE3 sing N N 321 MET OXT HXT sing N N 322 NAG C1 C2 sing N N 323 NAG C1 O1 sing N N 324 NAG C1 O5 sing N N 325 NAG C1 H1 sing N N 326 NAG C2 C3 sing N N 327 NAG C2 N2 sing N N 328 NAG C2 H2 sing N N 329 NAG C3 C4 sing N N 330 NAG C3 O3 sing N N 331 NAG C3 H3 sing N N 332 NAG C4 C5 sing N N 333 NAG C4 O4 sing N N 334 NAG C4 H4 sing N N 335 NAG C5 C6 sing N N 336 NAG C5 O5 sing N N 337 NAG C5 H5 sing N N 338 NAG C6 O6 sing N N 339 NAG C6 H61 sing N N 340 NAG C6 H62 sing N N 341 NAG C7 C8 sing N N 342 NAG C7 N2 sing N N 343 NAG C7 O7 doub N N 344 NAG C8 H81 sing N N 345 NAG C8 H82 sing N N 346 NAG C8 H83 sing N N 347 NAG N2 HN2 sing N N 348 NAG O1 HO1 sing N N 349 NAG O3 HO3 sing N N 350 NAG O4 HO4 sing N N 351 NAG O6 HO6 sing N N 352 PHE N CA sing N N 353 PHE N H sing N N 354 PHE N H2 sing N N 355 PHE CA C sing N N 356 PHE CA CB sing N N 357 PHE CA HA sing N N 358 PHE C O doub N N 359 PHE C OXT sing N N 360 PHE CB CG sing N N 361 PHE CB HB2 sing N N 362 PHE CB HB3 sing N N 363 PHE CG CD1 doub Y N 364 PHE CG CD2 sing Y N 365 PHE CD1 CE1 sing Y N 366 PHE CD1 HD1 sing N N 367 PHE CD2 CE2 doub Y N 368 PHE CD2 HD2 sing N N 369 PHE CE1 CZ doub Y N 370 PHE CE1 HE1 sing N N 371 PHE CE2 CZ sing Y N 372 PHE CE2 HE2 sing N N 373 PHE CZ HZ sing N N 374 PHE OXT HXT sing N N 375 PRO N CA sing N N 376 PRO N CD sing N N 377 PRO N H sing N N 378 PRO CA C sing N N 379 PRO CA CB sing N N 380 PRO CA HA sing N N 381 PRO C O doub N N 382 PRO C OXT sing N N 383 PRO CB CG sing N N 384 PRO CB HB2 sing N N 385 PRO CB HB3 sing N N 386 PRO CG CD sing N N 387 PRO CG HG2 sing N N 388 PRO CG HG3 sing N N 389 PRO CD HD2 sing N N 390 PRO CD HD3 sing N N 391 PRO OXT HXT sing N N 392 SER N CA sing N N 393 SER N H sing N N 394 SER N H2 sing N N 395 SER CA C sing N N 396 SER CA CB sing N N 397 SER CA HA sing N N 398 SER C O doub N N 399 SER C OXT sing N N 400 SER CB OG sing N N 401 SER CB HB2 sing N N 402 SER CB HB3 sing N N 403 SER OG HG sing N N 404 SER OXT HXT sing N N 405 SO4 S O1 doub N N 406 SO4 S O2 doub N N 407 SO4 S O3 sing N N 408 SO4 S O4 sing N N 409 THR N CA sing N N 410 THR N H sing N N 411 THR N H2 sing N N 412 THR CA C sing N N 413 THR CA CB sing N N 414 THR CA HA sing N N 415 THR C O doub N N 416 THR C OXT sing N N 417 THR CB OG1 sing N N 418 THR CB CG2 sing N N 419 THR CB HB sing N N 420 THR OG1 HG1 sing N N 421 THR CG2 HG21 sing N N 422 THR CG2 HG22 sing N N 423 THR CG2 HG23 sing N N 424 THR OXT HXT sing N N 425 TMP P O1P doub N N 426 TMP P O2P sing N N 427 TMP P O3P sing N N 428 TMP P "O5'" sing N N 429 TMP O2P HOP2 sing N N 430 TMP O3P HOP3 sing N N 431 TMP "O5'" "C5'" sing N N 432 TMP "C5'" "C4'" sing N N 433 TMP "C5'" "H5'1" sing N N 434 TMP "C5'" "H5'2" sing N N 435 TMP "C4'" "O4'" sing N N 436 TMP "C4'" "C3'" sing N N 437 TMP "C4'" "H4'" sing N N 438 TMP "O4'" "C1'" sing N N 439 TMP "C3'" "O3'" sing N N 440 TMP "C3'" "C2'" sing N N 441 TMP "C3'" "H3'" sing N N 442 TMP "O3'" "HO3'" sing N N 443 TMP "C2'" "C1'" sing N N 444 TMP "C2'" "H2'1" sing N N 445 TMP "C2'" "H2'2" sing N N 446 TMP "C1'" N1 sing N N 447 TMP "C1'" "H1'" sing N N 448 TMP N1 C2 sing N N 449 TMP N1 C6 sing N N 450 TMP C2 O2 doub N N 451 TMP C2 N3 sing N N 452 TMP N3 C4 sing N N 453 TMP N3 HN3 sing N N 454 TMP C4 O4 doub N N 455 TMP C4 C5 sing N N 456 TMP C5 C5M sing N N 457 TMP C5 C6 doub N N 458 TMP C5M H51 sing N N 459 TMP C5M H52 sing N N 460 TMP C5M H53 sing N N 461 TMP C6 H6 sing N N 462 TRP N CA sing N N 463 TRP N H sing N N 464 TRP N H2 sing N N 465 TRP CA C sing N N 466 TRP CA CB sing N N 467 TRP CA HA sing N N 468 TRP C O doub N N 469 TRP C OXT sing N N 470 TRP CB CG sing N N 471 TRP CB HB2 sing N N 472 TRP CB HB3 sing N N 473 TRP CG CD1 doub Y N 474 TRP CG CD2 sing Y N 475 TRP CD1 NE1 sing Y N 476 TRP CD1 HD1 sing N N 477 TRP CD2 CE2 doub Y N 478 TRP CD2 CE3 sing Y N 479 TRP NE1 CE2 sing Y N 480 TRP NE1 HE1 sing N N 481 TRP CE2 CZ2 sing Y N 482 TRP CE3 CZ3 doub Y N 483 TRP CE3 HE3 sing N N 484 TRP CZ2 CH2 doub Y N 485 TRP CZ2 HZ2 sing N N 486 TRP CZ3 CH2 sing Y N 487 TRP CZ3 HZ3 sing N N 488 TRP CH2 HH2 sing N N 489 TRP OXT HXT sing N N 490 TYR N CA sing N N 491 TYR N H sing N N 492 TYR N H2 sing N N 493 TYR CA C sing N N 494 TYR CA CB sing N N 495 TYR CA HA sing N N 496 TYR C O doub N N 497 TYR C OXT sing N N 498 TYR CB CG sing N N 499 TYR CB HB2 sing N N 500 TYR CB HB3 sing N N 501 TYR CG CD1 doub Y N 502 TYR CG CD2 sing Y N 503 TYR CD1 CE1 sing Y N 504 TYR CD1 HD1 sing N N 505 TYR CD2 CE2 doub Y N 506 TYR CD2 HD2 sing N N 507 TYR CE1 CZ doub Y N 508 TYR CE1 HE1 sing N N 509 TYR CE2 CZ sing Y N 510 TYR CE2 HE2 sing N N 511 TYR CZ OH sing N N 512 TYR OH HH sing N N 513 TYR OXT HXT sing N N 514 VAL N CA sing N N 515 VAL N H sing N N 516 VAL N H2 sing N N 517 VAL CA C sing N N 518 VAL CA CB sing N N 519 VAL CA HA sing N N 520 VAL C O doub N N 521 VAL C OXT sing N N 522 VAL CB CG1 sing N N 523 VAL CB CG2 sing N N 524 VAL CB HB sing N N 525 VAL CG1 HG11 sing N N 526 VAL CG1 HG12 sing N N 527 VAL CG1 HG13 sing N N 528 VAL CG2 HG21 sing N N 529 VAL CG2 HG22 sing N N 530 VAL CG2 HG23 sing N N 531 VAL OXT HXT sing N N 532 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 2 MAN 4 n 2 MAN 5 n 3 NAG 1 n 3 NAG 2 n 3 BMA 3 n 3 MAN 4 n 4 NAG 1 n 4 NAG 2 n 4 MAN 3 n # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4CWM _pdbx_initial_refinement_model.details 'PDB ENTRY 4CWM' # _atom_sites.entry_id 4CXO _atom_sites.fract_transf_matrix[1][1] 0.018552 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015115 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010189 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_