HEADER TRANSFERASE 31-OCT-14 4D4R TITLE FOCAL ADHESION KINASE CATALYTIC DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: FOCAL ADHESION KINASE 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 411-686; COMPND 5 SYNONYM: FADK 1, FOCAL ADHESION KINASE-RELATED NONKINASE, FRNK, COMPND 6 P41/P43FRNK, PROTEIN-TYROSINE KINASE 2, P125FAK, PP125FAK; COMPND 7 EC: 2.7.10.2; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 6 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HIGH FIVE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PACG2T KEYWDS TRANSFERASE, KINASE INHIBITOR, ATP-BINDING, INTEGRIN SIGNALING EXPDTA X-RAY DIFFRACTION AUTHOR J.LE COQ,A.LIN,D.LIETHA REVDAT 3 20-DEC-23 4D4R 1 REMARK REVDAT 2 03-APR-19 4D4R 1 SOURCE REVDAT 1 18-FEB-15 4D4R 0 JRNL AUTH J.ZHOU,A.BRONOWSKA,J.LE COQ,D.LIETHA,F.GRATER JRNL TITL ALLOSTERIC REGULATION OF FOCAL ADHESION KINASE BY PIP2 AND JRNL TITL 2 ATP. JRNL REF BIOPHYS.J. V. 108 698 2015 JRNL REFN ISSN 0006-3495 JRNL PMID 25650936 JRNL DOI 10.1016/J.BPJ.2014.11.3454 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 80385 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4222 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5949 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.2400 REMARK 3 BIN FREE R VALUE SET COUNT : 285 REMARK 3 BIN FREE R VALUE : 0.2570 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4195 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 332 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.086 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.083 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.055 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.041 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4302 ; 0.006 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4151 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5815 ; 1.148 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9552 ; 0.749 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 518 ; 5.707 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 193 ;32.005 ;23.109 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 778 ;12.489 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;13.870 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 643 ; 0.066 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4744 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 992 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2081 ; 0.758 ; 1.677 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2080 ; 0.757 ; 1.675 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2593 ; 1.309 ; 2.506 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2221 ; 1.058 ; 1.847 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 414 A 503 REMARK 3 ORIGIN FOR THE GROUP (A): 11.7820 -7.4680 34.2440 REMARK 3 T TENSOR REMARK 3 T11: 0.0079 T22: 0.0124 REMARK 3 T33: 0.0848 T12: -0.0091 REMARK 3 T13: 0.0035 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 1.5756 L22: 1.8797 REMARK 3 L33: 2.2142 L12: -0.2033 REMARK 3 L13: 0.2979 L23: -1.0231 REMARK 3 S TENSOR REMARK 3 S11: 0.0263 S12: -0.0308 S13: -0.0880 REMARK 3 S21: 0.0354 S22: -0.0678 S23: -0.1498 REMARK 3 S31: 0.0041 S32: 0.0533 S33: 0.0415 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 412 B 503 REMARK 3 ORIGIN FOR THE GROUP (A): -42.4560 53.4510 5.5240 REMARK 3 T TENSOR REMARK 3 T11: 0.0952 T22: 0.1704 REMARK 3 T33: 0.0537 T12: -0.0613 REMARK 3 T13: -0.0181 T23: 0.0468 REMARK 3 L TENSOR REMARK 3 L11: 2.1033 L22: 1.4856 REMARK 3 L33: 1.9001 L12: -0.4259 REMARK 3 L13: -0.5175 L23: 0.4621 REMARK 3 S TENSOR REMARK 3 S11: -0.0421 S12: 0.0859 S13: 0.2128 REMARK 3 S21: 0.1882 S22: 0.0586 S23: 0.0551 REMARK 3 S31: 0.0957 S32: -0.4147 S33: -0.0165 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 504 A 684 REMARK 3 ORIGIN FOR THE GROUP (A): -7.3930 12.8270 29.9600 REMARK 3 T TENSOR REMARK 3 T11: 0.0206 T22: 0.0073 REMARK 3 T33: 0.0717 T12: 0.0059 REMARK 3 T13: -0.0136 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 1.9094 L22: 0.9813 REMARK 3 L33: 0.2438 L12: 0.0491 REMARK 3 L13: 0.2619 L23: 0.1708 REMARK 3 S TENSOR REMARK 3 S11: -0.0740 S12: -0.0987 S13: 0.1864 REMARK 3 S21: 0.0476 S22: 0.0286 S23: -0.0096 REMARK 3 S31: 0.0026 S32: 0.0039 S33: 0.0454 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 504 B 680 REMARK 3 ORIGIN FOR THE GROUP (A): -24.6570 32.8960 12.4000 REMARK 3 T TENSOR REMARK 3 T11: 0.0660 T22: 0.0321 REMARK 3 T33: 0.0776 T12: -0.0182 REMARK 3 T13: -0.0369 T23: -0.0202 REMARK 3 L TENSOR REMARK 3 L11: 0.4787 L22: 1.5038 REMARK 3 L33: 0.6142 L12: -0.0844 REMARK 3 L13: 0.3115 L23: -0.6286 REMARK 3 S TENSOR REMARK 3 S11: -0.0101 S12: 0.0842 S13: -0.0879 REMARK 3 S21: -0.1837 S22: 0.1291 S23: 0.0921 REMARK 3 S31: 0.1171 S32: 0.0030 S33: -0.1190 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES WITH TLS ADDED REMARK 4 REMARK 4 4D4R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1290062098. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-AUG-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00004 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 84613 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 56.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.34000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2JKK REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8.5, 0.250 M LISO4, 22% REMARK 280 PEG4000, 10 MM TCEP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 41.07279 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.40550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 56.59508 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 41.07279 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 22.40550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 56.59508 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 411 REMARK 465 THR A 412 REMARK 465 ARG A 413 REMARK 465 GLU A 445 REMARK 465 ASN A 446 REMARK 465 PRO A 447 REMARK 465 GLY A 566 REMARK 465 LEU A 567 REMARK 465 SER A 568 REMARK 465 ARG A 569 REMARK 465 TYR A 570 REMARK 465 MET A 571 REMARK 465 GLU A 572 REMARK 465 ASP A 573 REMARK 465 SER A 574 REMARK 465 THR A 575 REMARK 465 TYR A 576 REMARK 465 TYR A 577 REMARK 465 LYS A 578 REMARK 465 ALA A 579 REMARK 465 SER A 580 REMARK 465 LYS A 581 REMARK 465 GLY A 582 REMARK 465 LYS A 583 REMARK 465 GLN A 686 REMARK 465 SER B 411 REMARK 465 LYS B 581 REMARK 465 GLY B 582 REMARK 465 LYS B 583 REMARK 465 LEU B 685 REMARK 465 GLN B 686 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 458 40.24 -104.64 REMARK 500 ARG A 545 -6.10 78.72 REMARK 500 ASP A 546 49.45 -150.59 REMARK 500 ASP A 564 60.17 33.48 REMARK 500 SER B 461 61.08 69.54 REMARK 500 GLU B 471 -13.26 83.80 REMARK 500 ARG B 545 -1.75 77.86 REMARK 500 ASP B 546 52.64 -149.92 REMARK 500 ASN B 646 -0.70 75.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR B 460 SER B 461 52.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2106 DISTANCE = 6.12 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1686 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1687 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4D4S RELATED DB: PDB REMARK 900 FOCAL ADHESION KINASE CATALYTIC DOMAIN REMARK 900 RELATED ID: 4D4V RELATED DB: PDB REMARK 900 FOCAL ADHESION KINASE CATALYTIC DOMAIN REMARK 900 RELATED ID: 4D4Y RELATED DB: PDB REMARK 900 FOCAL ADHESION KINASE CATALYTIC DOMAIN REMARK 900 RELATED ID: 4D55 RELATED DB: PDB REMARK 900 FOCAL ADHESION KINASE CATALYTIC DOMAIN REMARK 900 RELATED ID: 4D58 RELATED DB: PDB REMARK 900 FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH BIS-ANILINO REMARK 900 PYRIMIDINE INHIBITOR REMARK 900 RELATED ID: 4D5H RELATED DB: PDB REMARK 900 FOCAL ADHESION KINASE CATALYTIC DOMAIN REMARK 900 RELATED ID: 4D5K RELATED DB: PDB REMARK 900 FOCAL ADHESION KINASE CATALYTIC DOMAIN DBREF 4D4R A 411 686 UNP Q00944 FAK1_CHICK 411 686 DBREF 4D4R B 411 686 UNP Q00944 FAK1_CHICK 411 686 SEQRES 1 A 276 SER THR ARG ASP TYR GLU ILE GLN ARG GLU ARG ILE GLU SEQRES 2 A 276 LEU GLY ARG CYS ILE GLY GLU GLY GLN PHE GLY ASP VAL SEQRES 3 A 276 HIS GLN GLY ILE TYR MET SER PRO GLU ASN PRO ALA MET SEQRES 4 A 276 ALA VAL ALA ILE LYS THR CYS LYS ASN CYS THR SER ASP SEQRES 5 A 276 SER VAL ARG GLU LYS PHE LEU GLN GLU ALA LEU THR MET SEQRES 6 A 276 ARG GLN PHE ASP HIS PRO HIS ILE VAL LYS LEU ILE GLY SEQRES 7 A 276 VAL ILE THR GLU ASN PRO VAL TRP ILE ILE MET GLU LEU SEQRES 8 A 276 CYS THR LEU GLY GLU LEU ARG SER PHE LEU GLN VAL ARG SEQRES 9 A 276 LYS PHE SER LEU ASP LEU ALA SER LEU ILE LEU TYR ALA SEQRES 10 A 276 TYR GLN LEU SER THR ALA LEU ALA TYR LEU GLU SER LYS SEQRES 11 A 276 ARG PHE VAL HIS ARG ASP ILE ALA ALA ARG ASN VAL LEU SEQRES 12 A 276 VAL SER ALA THR ASP CYS VAL LYS LEU GLY ASP PHE GLY SEQRES 13 A 276 LEU SER ARG TYR MET GLU ASP SER THR TYR TYR LYS ALA SEQRES 14 A 276 SER LYS GLY LYS LEU PRO ILE LYS TRP MET ALA PRO GLU SEQRES 15 A 276 SER ILE ASN PHE ARG ARG PHE THR SER ALA SER ASP VAL SEQRES 16 A 276 TRP MET PHE GLY VAL CYS MET TRP GLU ILE LEU MET HIS SEQRES 17 A 276 GLY VAL LYS PRO PHE GLN GLY VAL LYS ASN ASN ASP VAL SEQRES 18 A 276 ILE GLY ARG ILE GLU ASN GLY GLU ARG LEU PRO MET PRO SEQRES 19 A 276 PRO ASN CYS PRO PRO THR LEU TYR SER LEU MET THR LYS SEQRES 20 A 276 CYS TRP ALA TYR ASP PRO SER ARG ARG PRO ARG PHE THR SEQRES 21 A 276 GLU LEU LYS ALA GLN LEU SER THR ILE LEU GLU GLU GLU SEQRES 22 A 276 LYS LEU GLN SEQRES 1 B 276 SER THR ARG ASP TYR GLU ILE GLN ARG GLU ARG ILE GLU SEQRES 2 B 276 LEU GLY ARG CYS ILE GLY GLU GLY GLN PHE GLY ASP VAL SEQRES 3 B 276 HIS GLN GLY ILE TYR MET SER PRO GLU ASN PRO ALA MET SEQRES 4 B 276 ALA VAL ALA ILE LYS THR CYS LYS ASN CYS THR SER ASP SEQRES 5 B 276 SER VAL ARG GLU LYS PHE LEU GLN GLU ALA LEU THR MET SEQRES 6 B 276 ARG GLN PHE ASP HIS PRO HIS ILE VAL LYS LEU ILE GLY SEQRES 7 B 276 VAL ILE THR GLU ASN PRO VAL TRP ILE ILE MET GLU LEU SEQRES 8 B 276 CYS THR LEU GLY GLU LEU ARG SER PHE LEU GLN VAL ARG SEQRES 9 B 276 LYS PHE SER LEU ASP LEU ALA SER LEU ILE LEU TYR ALA SEQRES 10 B 276 TYR GLN LEU SER THR ALA LEU ALA TYR LEU GLU SER LYS SEQRES 11 B 276 ARG PHE VAL HIS ARG ASP ILE ALA ALA ARG ASN VAL LEU SEQRES 12 B 276 VAL SER ALA THR ASP CYS VAL LYS LEU GLY ASP PHE GLY SEQRES 13 B 276 LEU SER ARG TYR MET GLU ASP SER THR TYR TYR LYS ALA SEQRES 14 B 276 SER LYS GLY LYS LEU PRO ILE LYS TRP MET ALA PRO GLU SEQRES 15 B 276 SER ILE ASN PHE ARG ARG PHE THR SER ALA SER ASP VAL SEQRES 16 B 276 TRP MET PHE GLY VAL CYS MET TRP GLU ILE LEU MET HIS SEQRES 17 B 276 GLY VAL LYS PRO PHE GLN GLY VAL LYS ASN ASN ASP VAL SEQRES 18 B 276 ILE GLY ARG ILE GLU ASN GLY GLU ARG LEU PRO MET PRO SEQRES 19 B 276 PRO ASN CYS PRO PRO THR LEU TYR SER LEU MET THR LYS SEQRES 20 B 276 CYS TRP ALA TYR ASP PRO SER ARG ARG PRO ARG PHE THR SEQRES 21 B 276 GLU LEU LYS ALA GLN LEU SER THR ILE LEU GLU GLU GLU SEQRES 22 B 276 LYS LEU GLN HET SO4 A1686 5 HET SO4 A1687 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *332(H2 O) HELIX 1 1 GLN A 418 GLU A 420 5 3 HELIX 2 2 SER A 461 ARG A 476 1 16 HELIX 3 3 LEU A 507 LYS A 515 1 9 HELIX 4 4 ASP A 519 LYS A 540 1 22 HELIX 5 5 ALA A 548 ARG A 550 5 3 HELIX 6 6 PRO A 585 MET A 589 5 5 HELIX 7 7 ALA A 590 ARG A 597 1 8 HELIX 8 8 THR A 600 MET A 617 1 18 HELIX 9 9 LYS A 627 ASN A 629 5 3 HELIX 10 10 ASP A 630 ASN A 637 1 8 HELIX 11 11 PRO A 648 TRP A 659 1 12 HELIX 12 12 ASP A 662 ARG A 666 5 5 HELIX 13 13 ARG A 668 LEU A 685 1 18 HELIX 14 14 THR B 412 TYR B 415 5 4 HELIX 15 15 GLN B 418 GLU B 420 5 3 HELIX 16 16 SER B 461 GLN B 470 1 10 HELIX 17 17 LEU B 473 PHE B 478 5 6 HELIX 18 18 LEU B 507 ARG B 514 1 8 HELIX 19 19 ASP B 519 LYS B 540 1 22 HELIX 20 20 ALA B 548 ARG B 550 5 3 HELIX 21 21 ASP B 564 SER B 568 5 5 HELIX 22 22 MET B 571 TYR B 576 5 6 HELIX 23 23 TYR B 576 SER B 580 5 5 HELIX 24 24 PRO B 585 MET B 589 5 5 HELIX 25 25 ALA B 590 ARG B 597 1 8 HELIX 26 26 THR B 600 MET B 617 1 18 HELIX 27 27 LYS B 627 ASN B 629 5 3 HELIX 28 28 ASP B 630 ASN B 637 1 8 HELIX 29 29 PRO B 648 TRP B 659 1 12 HELIX 30 30 ASP B 662 ARG B 666 5 5 HELIX 31 31 ARG B 668 LYS B 684 1 17 SHEET 1 AA 5 ILE A 422 GLY A 431 0 SHEET 2 AA 5 GLY A 434 TYR A 441 -1 O GLY A 434 N GLY A 431 SHEET 3 AA 5 MET A 449 THR A 455 -1 O MET A 449 N TYR A 441 SHEET 4 AA 5 TRP A 496 GLU A 500 -1 O ILE A 497 N LYS A 454 SHEET 5 AA 5 LEU A 486 ILE A 490 -1 N ILE A 487 O ILE A 498 SHEET 1 AB 3 GLY A 505 GLU A 506 0 SHEET 2 AB 3 VAL A 552 ALA A 556 -1 N VAL A 554 O GLY A 505 SHEET 3 AB 3 CYS A 559 LEU A 562 -1 O CYS A 559 N SER A 555 SHEET 1 BA 5 ILE B 422 GLU B 430 0 SHEET 2 BA 5 ASP B 435 TYR B 441 -1 O VAL B 436 N ILE B 428 SHEET 3 BA 5 MET B 449 THR B 455 -1 O MET B 449 N TYR B 441 SHEET 4 BA 5 TRP B 496 GLU B 500 -1 O ILE B 497 N LYS B 454 SHEET 5 BA 5 LEU B 486 ILE B 490 -1 N ILE B 487 O ILE B 498 SHEET 1 BB 3 GLY B 505 GLU B 506 0 SHEET 2 BB 3 VAL B 552 ALA B 556 -1 N VAL B 554 O GLY B 505 SHEET 3 BB 3 CYS B 559 LEU B 562 -1 O CYS B 559 N SER B 555 CISPEP 1 ASN A 493 PRO A 494 0 -0.41 CISPEP 2 ASN B 493 PRO B 494 0 0.58 SITE 1 AC1 10 SER A 601 ARG A 668 HOH A2073 HOH A2074 SITE 2 AC1 10 HOH A2110 HOH A2112 HOH A2172 HOH A2182 SITE 3 AC1 10 SER B 601 ARG B 668 SITE 1 AC2 3 HIS A 480 LYS A 673 HOH A2064 CRYST1 115.760 44.811 118.076 90.00 106.54 90.00 I 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008639 0.000000 0.002565 0.00000 SCALE2 0.000000 0.022316 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008835 0.00000