data_4D5S # _entry.id 4D5S # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4D5S pdb_00004d5s 10.2210/pdb4d5s/pdb PDBE EBI-62239 ? ? WWPDB D_1290062239 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4D5R unspecified 'STRUCTURE OF N-TERMINALLY TRUNCATED A49 FROM VACCINIA VIRUS WESTERN RESERVE' PDB 4D5T unspecified 'STRUCTURE OF N-TERMINALLY TRUNCATED A49 FROM VACCINIA VIRUS WESTERN RESERVE' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4D5S _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-11-07 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Neidel, S.' 1 'Maluquer de Motes, C.' 2 'Mansur, D.S.' 3 'Strnadova, P.' 4 'Smith, G.L.' 5 'Graham, S.C.' 6 # _citation.id primary _citation.title 'Vaccinia Virus Protein A49 is an Unexpected Member of the B-Cell Lymphoma (Bcl)-2 Protein Family' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 290 _citation.page_first 5991 _citation.page_last ? _citation.year 2015 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25605733 _citation.pdbx_database_id_DOI 10.1074/JBC.M114.624650 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Neidel, S.' 1 ? primary 'Maluquer De Motes, C.' 2 ? primary 'Mansur, D.S.' 3 ? primary 'Strnadova, P.' 4 ? primary 'Smith, G.L.' 5 ? primary 'Graham, S.C.' 6 ? # _cell.entry_id 4D5S _cell.length_a 67.783 _cell.length_b 67.783 _cell.length_c 153.947 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4D5S _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description A49R _entity.formula_weight 19741.240 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MDEAYYSGNLESVLGYVSDMHTELASISQLVIAKIETIDNDILNKDIVNFIMCRSNLDNPFISFLDTVYTIIDQENYQTE LINSLDDNEIID(CSO)IVNKFMSFYKDNLENIVDAIITLKYIMNNPDFKTTYAEVLGSRIADIDIKQVIRENILQLSND IRERYLKHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MDEAYYSGNLESVLGYVSDMHTELASISQLVIAKIETIDNDILNKDIVNFIMCRSNLDNPFISFLDTVYTIIDQENYQTE LINSLDDNEIIDCIVNKFMSFYKDNLENIVDAIITLKYIMNNPDFKTTYAEVLGSRIADIDIKQVIRENILQLSNDIRER YLKHHHHHH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 GLU n 1 4 ALA n 1 5 TYR n 1 6 TYR n 1 7 SER n 1 8 GLY n 1 9 ASN n 1 10 LEU n 1 11 GLU n 1 12 SER n 1 13 VAL n 1 14 LEU n 1 15 GLY n 1 16 TYR n 1 17 VAL n 1 18 SER n 1 19 ASP n 1 20 MET n 1 21 HIS n 1 22 THR n 1 23 GLU n 1 24 LEU n 1 25 ALA n 1 26 SER n 1 27 ILE n 1 28 SER n 1 29 GLN n 1 30 LEU n 1 31 VAL n 1 32 ILE n 1 33 ALA n 1 34 LYS n 1 35 ILE n 1 36 GLU n 1 37 THR n 1 38 ILE n 1 39 ASP n 1 40 ASN n 1 41 ASP n 1 42 ILE n 1 43 LEU n 1 44 ASN n 1 45 LYS n 1 46 ASP n 1 47 ILE n 1 48 VAL n 1 49 ASN n 1 50 PHE n 1 51 ILE n 1 52 MET n 1 53 CYS n 1 54 ARG n 1 55 SER n 1 56 ASN n 1 57 LEU n 1 58 ASP n 1 59 ASN n 1 60 PRO n 1 61 PHE n 1 62 ILE n 1 63 SER n 1 64 PHE n 1 65 LEU n 1 66 ASP n 1 67 THR n 1 68 VAL n 1 69 TYR n 1 70 THR n 1 71 ILE n 1 72 ILE n 1 73 ASP n 1 74 GLN n 1 75 GLU n 1 76 ASN n 1 77 TYR n 1 78 GLN n 1 79 THR n 1 80 GLU n 1 81 LEU n 1 82 ILE n 1 83 ASN n 1 84 SER n 1 85 LEU n 1 86 ASP n 1 87 ASP n 1 88 ASN n 1 89 GLU n 1 90 ILE n 1 91 ILE n 1 92 ASP n 1 93 CSO n 1 94 ILE n 1 95 VAL n 1 96 ASN n 1 97 LYS n 1 98 PHE n 1 99 MET n 1 100 SER n 1 101 PHE n 1 102 TYR n 1 103 LYS n 1 104 ASP n 1 105 ASN n 1 106 LEU n 1 107 GLU n 1 108 ASN n 1 109 ILE n 1 110 VAL n 1 111 ASP n 1 112 ALA n 1 113 ILE n 1 114 ILE n 1 115 THR n 1 116 LEU n 1 117 LYS n 1 118 TYR n 1 119 ILE n 1 120 MET n 1 121 ASN n 1 122 ASN n 1 123 PRO n 1 124 ASP n 1 125 PHE n 1 126 LYS n 1 127 THR n 1 128 THR n 1 129 TYR n 1 130 ALA n 1 131 GLU n 1 132 VAL n 1 133 LEU n 1 134 GLY n 1 135 SER n 1 136 ARG n 1 137 ILE n 1 138 ALA n 1 139 ASP n 1 140 ILE n 1 141 ASP n 1 142 ILE n 1 143 LYS n 1 144 GLN n 1 145 VAL n 1 146 ILE n 1 147 ARG n 1 148 GLU n 1 149 ASN n 1 150 ILE n 1 151 LEU n 1 152 GLN n 1 153 LEU n 1 154 SER n 1 155 ASN n 1 156 ASP n 1 157 ILE n 1 158 ARG n 1 159 GLU n 1 160 ARG n 1 161 TYR n 1 162 LEU n 1 163 LYS n 1 164 HIS n 1 165 HIS n 1 166 HIS n 1 167 HIS n 1 168 HIS n 1 169 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'WESTERN RESERVE' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'VACCINIA VIRUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 696871 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant 'ROSETTA2 PLYSS' _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name POPINE _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A49R_VACCW _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P31037 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4D5S A 1 ? 162 ? P31037 1 ? 162 ? 1 162 2 1 4D5S B 1 ? 162 ? P31037 1 ? 162 ? 1 162 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4D5S LYS A 163 ? UNP P31037 ? ? 'expression tag' 163 1 1 4D5S HIS A 164 ? UNP P31037 ? ? 'expression tag' 164 2 1 4D5S HIS A 165 ? UNP P31037 ? ? 'expression tag' 165 3 1 4D5S HIS A 166 ? UNP P31037 ? ? 'expression tag' 166 4 1 4D5S HIS A 167 ? UNP P31037 ? ? 'expression tag' 167 5 1 4D5S HIS A 168 ? UNP P31037 ? ? 'expression tag' 168 6 1 4D5S HIS A 169 ? UNP P31037 ? ? 'expression tag' 169 7 2 4D5S LYS B 163 ? UNP P31037 ? ? 'expression tag' 163 8 2 4D5S HIS B 164 ? UNP P31037 ? ? 'expression tag' 164 9 2 4D5S HIS B 165 ? UNP P31037 ? ? 'expression tag' 165 10 2 4D5S HIS B 166 ? UNP P31037 ? ? 'expression tag' 166 11 2 4D5S HIS B 167 ? UNP P31037 ? ? 'expression tag' 167 12 2 4D5S HIS B 168 ? UNP P31037 ? ? 'expression tag' 168 13 2 4D5S HIS B 169 ? UNP P31037 ? ? 'expression tag' 169 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CSO 'L-peptide linking' n S-HYDROXYCYSTEINE ? 'C3 H7 N O3 S' 137.158 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4D5S _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.22 _exptl_crystal.density_percent_sol 44.5 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;FULL-LENGTH A49 (100 NL AT 9.5 MG/ML) WAS MIXED WITH 100 NL RESERVOIR SOLUTION AND EQUILIBRATED AT 21 C AGAINST 95 UL RESERVOIRS COMPRISING 25% (WT/VOL) PEG 3350, 0.2 M AMMONIUM SULFATE AND 0.1 M TRIS PH 9.5. CRYOPROTECTION WAS ACHIEVED BY QUICKLY SWEEPING THE CRYSTAL THROUGH RESERVOIR SUPPLEMENTED WITH 20% (VOL/VOL) GLYCEROL. ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2008-12-12 _diffrn_detector.details 'TOROIDAL ZERODUR MIRROR' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DIAMOND (ASYMMETRIC LAUE 001)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.933 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-2 _diffrn_source.pdbx_wavelength 0.933 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4D5S _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 3.00 _reflns.number_obs 7353 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.10 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.50 _reflns.B_iso_Wilson_estimate 81.5 _reflns.pdbx_redundancy 13.8 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 3.00 _reflns_shell.d_res_low 3.05 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.20 _reflns_shell.pdbx_redundancy 14.4 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4D5S _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 7350 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 153.95 _refine.ls_d_res_high 3.00 _refine.ls_percent_reflns_obs 99.91 _refine.ls_R_factor_obs 0.22215 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21987 _refine.ls_R_factor_R_free 0.27332 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.6 _refine.ls_number_reflns_R_free 356 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.952 _refine.B_iso_mean 94.958 _refine.aniso_B[1][1] 2.09 _refine.aniso_B[2][2] 2.09 _refine.aniso_B[3][3] -4.18 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES WITH TLS ADDED.' _refine.pdbx_starting_model 'PDB ENTRY 4D5R' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.465 _refine.overall_SU_ML 0.421 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 59.530 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2292 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2292 _refine_hist.d_res_high 3.00 _refine_hist.d_res_low 153.95 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.020 ? 2318 'X-RAY DIFFRACTION' ? r_bond_other_d 0.003 0.020 ? 2222 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.370 1.963 ? 3146 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.832 3.000 ? 5100 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.714 5.000 ? 284 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 41.254 26.610 ? 118 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.934 15.000 ? 426 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.500 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.071 0.200 ? 386 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 2628 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.003 0.020 ? 496 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 3.611 5.759 ? 1142 'X-RAY DIFFRACTION' ? r_mcbond_other 3.605 5.760 ? 1141 'X-RAY DIFFRACTION' ? r_mcangle_it 5.782 8.629 ? 1424 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 4.126 6.182 ? 1176 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 3.000 _refine_ls_shell.d_res_low 3.078 _refine_ls_shell.number_reflns_R_work 532 _refine_ls_shell.R_factor_R_work 0.358 _refine_ls_shell.percent_reflns_obs 99.82 _refine_ls_shell.R_factor_R_free 0.323 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 24 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 4D5S _struct.title 'Structure of A49 from Vaccinia Virus Western Reserve' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4D5S _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text 'VIRAL PROTEIN, POXVIRUS, B CELL LYMPHOMA 2 (BCL-2) FAMILY, INNATE IMMUNE MODULATOR, NUCLEAR FACTOR KAPPA B (NF-KB)' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 19 ? ILE A 35 ? ASP A 19 ILE A 35 1 ? 17 HELX_P HELX_P2 2 ASP A 39 ? MET A 52 ? ASP A 39 MET A 52 1 ? 14 HELX_P HELX_P3 3 ASN A 59 ? ASP A 73 ? ASN A 59 ASP A 73 1 ? 15 HELX_P HELX_P4 4 ASN A 76 ? LEU A 85 ? ASN A 76 LEU A 85 1 ? 10 HELX_P HELX_P5 5 ASP A 86 ? MET A 99 ? ASP A 86 MET A 99 1 ? 14 HELX_P HELX_P6 6 SER A 100 ? LYS A 103 ? SER A 100 LYS A 103 5 ? 4 HELX_P HELX_P7 7 ASN A 105 ? ASN A 121 ? ASN A 105 ASN A 121 1 ? 17 HELX_P HELX_P8 8 ASN A 122 ? ALA A 138 ? ASN A 122 ALA A 138 1 ? 17 HELX_P HELX_P9 9 ILE A 142 ? ARG A 160 ? ILE A 142 ARG A 160 1 ? 19 HELX_P HELX_P10 10 ASP B 19 ? ILE B 35 ? ASP B 19 ILE B 35 1 ? 17 HELX_P HELX_P11 11 ASP B 39 ? MET B 52 ? ASP B 39 MET B 52 1 ? 14 HELX_P HELX_P12 12 ASN B 59 ? ASN B 76 ? ASN B 59 ASN B 76 1 ? 18 HELX_P HELX_P13 13 ASN B 76 ? LEU B 85 ? ASN B 76 LEU B 85 1 ? 10 HELX_P HELX_P14 14 ASP B 86 ? MET B 99 ? ASP B 86 MET B 99 1 ? 14 HELX_P HELX_P15 15 SER B 100 ? LYS B 103 ? SER B 100 LYS B 103 5 ? 4 HELX_P HELX_P16 16 ASN B 105 ? ASN B 121 ? ASN B 105 ASN B 121 1 ? 17 HELX_P HELX_P17 17 ASN B 122 ? ALA B 138 ? ASN B 122 ALA B 138 1 ? 17 HELX_P HELX_P18 18 ILE B 142 ? ARG B 160 ? ILE B 142 ARG B 160 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASP 92 C ? ? ? 1_555 A CSO 93 N ? ? A ASP 92 A CSO 93 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale2 covale both ? A CSO 93 C ? ? ? 1_555 A ILE 94 N ? ? A CSO 93 A ILE 94 1_555 ? ? ? ? ? ? ? 1.313 ? ? covale3 covale both ? B ASP 92 C ? ? ? 1_555 B CSO 93 N ? ? B ASP 92 B CSO 93 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale4 covale both ? B CSO 93 C ? ? ? 1_555 B ILE 94 N ? ? B CSO 93 B ILE 94 1_555 ? ? ? ? ? ? ? 1.309 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 4D5S _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4D5S _atom_sites.fract_transf_matrix[1][1] 0.014753 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014753 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006496 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ASP 2 2 ? ? ? A . n A 1 3 GLU 3 3 ? ? ? A . n A 1 4 ALA 4 4 ? ? ? A . n A 1 5 TYR 5 5 ? ? ? A . n A 1 6 TYR 6 6 ? ? ? A . n A 1 7 SER 7 7 ? ? ? A . n A 1 8 GLY 8 8 ? ? ? A . n A 1 9 ASN 9 9 ? ? ? A . n A 1 10 LEU 10 10 ? ? ? A . n A 1 11 GLU 11 11 ? ? ? A . n A 1 12 SER 12 12 ? ? ? A . n A 1 13 VAL 13 13 ? ? ? A . n A 1 14 LEU 14 14 ? ? ? A . n A 1 15 GLY 15 15 ? ? ? A . n A 1 16 TYR 16 16 ? ? ? A . n A 1 17 VAL 17 17 ? ? ? A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 MET 20 20 20 MET MET A . n A 1 21 HIS 21 21 21 HIS HIS A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 GLN 29 29 29 GLN GLN A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 ASN 49 49 49 ASN ASN A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 MET 52 52 52 MET MET A . n A 1 53 CYS 53 53 53 CYS CYS A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 PHE 61 61 61 PHE PHE A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 TYR 69 69 69 TYR TYR A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 GLN 74 74 74 GLN GLN A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 TYR 77 77 77 TYR TYR A . n A 1 78 GLN 78 78 78 GLN GLN A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 ASP 86 86 86 ASP ASP A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 ILE 91 91 91 ILE ILE A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 CSO 93 93 93 CSO CSO A . n A 1 94 ILE 94 94 94 ILE ILE A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 ASN 96 96 96 ASN ASN A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 PHE 98 98 98 PHE PHE A . n A 1 99 MET 99 99 99 MET MET A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 PHE 101 101 101 PHE PHE A . n A 1 102 TYR 102 102 102 TYR TYR A . n A 1 103 LYS 103 103 103 LYS LYS A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 ASN 105 105 105 ASN ASN A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 ASN 108 108 108 ASN ASN A . n A 1 109 ILE 109 109 109 ILE ILE A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 ASP 111 111 111 ASP ASP A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 ILE 113 113 113 ILE ILE A . n A 1 114 ILE 114 114 114 ILE ILE A . n A 1 115 THR 115 115 115 THR THR A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 TYR 118 118 118 TYR TYR A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 MET 120 120 120 MET MET A . n A 1 121 ASN 121 121 121 ASN ASN A . n A 1 122 ASN 122 122 122 ASN ASN A . n A 1 123 PRO 123 123 123 PRO PRO A . n A 1 124 ASP 124 124 124 ASP ASP A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 LYS 126 126 126 LYS LYS A . n A 1 127 THR 127 127 127 THR THR A . n A 1 128 THR 128 128 128 THR THR A . n A 1 129 TYR 129 129 129 TYR TYR A . n A 1 130 ALA 130 130 130 ALA ALA A . n A 1 131 GLU 131 131 131 GLU GLU A . n A 1 132 VAL 132 132 132 VAL VAL A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 GLY 134 134 134 GLY GLY A . n A 1 135 SER 135 135 135 SER SER A . n A 1 136 ARG 136 136 136 ARG ARG A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 ALA 138 138 138 ALA ALA A . n A 1 139 ASP 139 139 139 ASP ASP A . n A 1 140 ILE 140 140 140 ILE ILE A . n A 1 141 ASP 141 141 141 ASP ASP A . n A 1 142 ILE 142 142 142 ILE ILE A . n A 1 143 LYS 143 143 143 LYS LYS A . n A 1 144 GLN 144 144 144 GLN GLN A . n A 1 145 VAL 145 145 145 VAL VAL A . n A 1 146 ILE 146 146 146 ILE ILE A . n A 1 147 ARG 147 147 147 ARG ARG A . n A 1 148 GLU 148 148 148 GLU GLU A . n A 1 149 ASN 149 149 149 ASN ASN A . n A 1 150 ILE 150 150 150 ILE ILE A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 GLN 152 152 152 GLN GLN A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 ASN 155 155 155 ASN ASN A . n A 1 156 ASP 156 156 156 ASP ASP A . n A 1 157 ILE 157 157 157 ILE ILE A . n A 1 158 ARG 158 158 158 ARG ARG A . n A 1 159 GLU 159 159 159 GLU GLU A . n A 1 160 ARG 160 160 160 ARG ARG A . n A 1 161 TYR 161 161 ? ? ? A . n A 1 162 LEU 162 162 ? ? ? A . n A 1 163 LYS 163 163 ? ? ? A . n A 1 164 HIS 164 164 ? ? ? A . n A 1 165 HIS 165 165 ? ? ? A . n A 1 166 HIS 166 166 ? ? ? A . n A 1 167 HIS 167 167 ? ? ? A . n A 1 168 HIS 168 168 ? ? ? A . n A 1 169 HIS 169 169 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 ASP 2 2 ? ? ? B . n B 1 3 GLU 3 3 ? ? ? B . n B 1 4 ALA 4 4 ? ? ? B . n B 1 5 TYR 5 5 ? ? ? B . n B 1 6 TYR 6 6 ? ? ? B . n B 1 7 SER 7 7 ? ? ? B . n B 1 8 GLY 8 8 ? ? ? B . n B 1 9 ASN 9 9 ? ? ? B . n B 1 10 LEU 10 10 ? ? ? B . n B 1 11 GLU 11 11 ? ? ? B . n B 1 12 SER 12 12 ? ? ? B . n B 1 13 VAL 13 13 ? ? ? B . n B 1 14 LEU 14 14 ? ? ? B . n B 1 15 GLY 15 15 ? ? ? B . n B 1 16 TYR 16 16 ? ? ? B . n B 1 17 VAL 17 17 ? ? ? B . n B 1 18 SER 18 18 18 SER SER B . n B 1 19 ASP 19 19 19 ASP ASP B . n B 1 20 MET 20 20 20 MET MET B . n B 1 21 HIS 21 21 21 HIS HIS B . n B 1 22 THR 22 22 22 THR THR B . n B 1 23 GLU 23 23 23 GLU GLU B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 ALA 25 25 25 ALA ALA B . n B 1 26 SER 26 26 26 SER SER B . n B 1 27 ILE 27 27 27 ILE ILE B . n B 1 28 SER 28 28 28 SER SER B . n B 1 29 GLN 29 29 29 GLN GLN B . n B 1 30 LEU 30 30 30 LEU LEU B . n B 1 31 VAL 31 31 31 VAL VAL B . n B 1 32 ILE 32 32 32 ILE ILE B . n B 1 33 ALA 33 33 33 ALA ALA B . n B 1 34 LYS 34 34 34 LYS LYS B . n B 1 35 ILE 35 35 35 ILE ILE B . n B 1 36 GLU 36 36 36 GLU GLU B . n B 1 37 THR 37 37 37 THR THR B . n B 1 38 ILE 38 38 38 ILE ILE B . n B 1 39 ASP 39 39 39 ASP ASP B . n B 1 40 ASN 40 40 40 ASN ASN B . n B 1 41 ASP 41 41 41 ASP ASP B . n B 1 42 ILE 42 42 42 ILE ILE B . n B 1 43 LEU 43 43 43 LEU LEU B . n B 1 44 ASN 44 44 44 ASN ASN B . n B 1 45 LYS 45 45 45 LYS LYS B . n B 1 46 ASP 46 46 46 ASP ASP B . n B 1 47 ILE 47 47 47 ILE ILE B . n B 1 48 VAL 48 48 48 VAL VAL B . n B 1 49 ASN 49 49 49 ASN ASN B . n B 1 50 PHE 50 50 50 PHE PHE B . n B 1 51 ILE 51 51 51 ILE ILE B . n B 1 52 MET 52 52 52 MET MET B . n B 1 53 CYS 53 53 53 CYS CYS B . n B 1 54 ARG 54 54 54 ARG ARG B . n B 1 55 SER 55 55 55 SER SER B . n B 1 56 ASN 56 56 56 ASN ASN B . n B 1 57 LEU 57 57 57 LEU LEU B . n B 1 58 ASP 58 58 58 ASP ASP B . n B 1 59 ASN 59 59 59 ASN ASN B . n B 1 60 PRO 60 60 60 PRO PRO B . n B 1 61 PHE 61 61 61 PHE PHE B . n B 1 62 ILE 62 62 62 ILE ILE B . n B 1 63 SER 63 63 63 SER SER B . n B 1 64 PHE 64 64 64 PHE PHE B . n B 1 65 LEU 65 65 65 LEU LEU B . n B 1 66 ASP 66 66 66 ASP ASP B . n B 1 67 THR 67 67 67 THR THR B . n B 1 68 VAL 68 68 68 VAL VAL B . n B 1 69 TYR 69 69 69 TYR TYR B . n B 1 70 THR 70 70 70 THR THR B . n B 1 71 ILE 71 71 71 ILE ILE B . n B 1 72 ILE 72 72 72 ILE ILE B . n B 1 73 ASP 73 73 73 ASP ASP B . n B 1 74 GLN 74 74 74 GLN GLN B . n B 1 75 GLU 75 75 75 GLU GLU B . n B 1 76 ASN 76 76 76 ASN ASN B . n B 1 77 TYR 77 77 77 TYR TYR B . n B 1 78 GLN 78 78 78 GLN GLN B . n B 1 79 THR 79 79 79 THR THR B . n B 1 80 GLU 80 80 80 GLU GLU B . n B 1 81 LEU 81 81 81 LEU LEU B . n B 1 82 ILE 82 82 82 ILE ILE B . n B 1 83 ASN 83 83 83 ASN ASN B . n B 1 84 SER 84 84 84 SER SER B . n B 1 85 LEU 85 85 85 LEU LEU B . n B 1 86 ASP 86 86 86 ASP ASP B . n B 1 87 ASP 87 87 87 ASP ASP B . n B 1 88 ASN 88 88 88 ASN ASN B . n B 1 89 GLU 89 89 89 GLU GLU B . n B 1 90 ILE 90 90 90 ILE ILE B . n B 1 91 ILE 91 91 91 ILE ILE B . n B 1 92 ASP 92 92 92 ASP ASP B . n B 1 93 CSO 93 93 93 CSO CSO B . n B 1 94 ILE 94 94 94 ILE ILE B . n B 1 95 VAL 95 95 95 VAL VAL B . n B 1 96 ASN 96 96 96 ASN ASN B . n B 1 97 LYS 97 97 97 LYS LYS B . n B 1 98 PHE 98 98 98 PHE PHE B . n B 1 99 MET 99 99 99 MET MET B . n B 1 100 SER 100 100 100 SER SER B . n B 1 101 PHE 101 101 101 PHE PHE B . n B 1 102 TYR 102 102 102 TYR TYR B . n B 1 103 LYS 103 103 103 LYS LYS B . n B 1 104 ASP 104 104 104 ASP ASP B . n B 1 105 ASN 105 105 105 ASN ASN B . n B 1 106 LEU 106 106 106 LEU LEU B . n B 1 107 GLU 107 107 107 GLU GLU B . n B 1 108 ASN 108 108 108 ASN ASN B . n B 1 109 ILE 109 109 109 ILE ILE B . n B 1 110 VAL 110 110 110 VAL VAL B . n B 1 111 ASP 111 111 111 ASP ASP B . n B 1 112 ALA 112 112 112 ALA ALA B . n B 1 113 ILE 113 113 113 ILE ILE B . n B 1 114 ILE 114 114 114 ILE ILE B . n B 1 115 THR 115 115 115 THR THR B . n B 1 116 LEU 116 116 116 LEU LEU B . n B 1 117 LYS 117 117 117 LYS LYS B . n B 1 118 TYR 118 118 118 TYR TYR B . n B 1 119 ILE 119 119 119 ILE ILE B . n B 1 120 MET 120 120 120 MET MET B . n B 1 121 ASN 121 121 121 ASN ASN B . n B 1 122 ASN 122 122 122 ASN ASN B . n B 1 123 PRO 123 123 123 PRO PRO B . n B 1 124 ASP 124 124 124 ASP ASP B . n B 1 125 PHE 125 125 125 PHE PHE B . n B 1 126 LYS 126 126 126 LYS LYS B . n B 1 127 THR 127 127 127 THR THR B . n B 1 128 THR 128 128 128 THR THR B . n B 1 129 TYR 129 129 129 TYR TYR B . n B 1 130 ALA 130 130 130 ALA ALA B . n B 1 131 GLU 131 131 131 GLU GLU B . n B 1 132 VAL 132 132 132 VAL VAL B . n B 1 133 LEU 133 133 133 LEU LEU B . n B 1 134 GLY 134 134 134 GLY GLY B . n B 1 135 SER 135 135 135 SER SER B . n B 1 136 ARG 136 136 136 ARG ARG B . n B 1 137 ILE 137 137 137 ILE ILE B . n B 1 138 ALA 138 138 138 ALA ALA B . n B 1 139 ASP 139 139 139 ASP ASP B . n B 1 140 ILE 140 140 140 ILE ILE B . n B 1 141 ASP 141 141 141 ASP ASP B . n B 1 142 ILE 142 142 142 ILE ILE B . n B 1 143 LYS 143 143 143 LYS LYS B . n B 1 144 GLN 144 144 144 GLN GLN B . n B 1 145 VAL 145 145 145 VAL VAL B . n B 1 146 ILE 146 146 146 ILE ILE B . n B 1 147 ARG 147 147 147 ARG ARG B . n B 1 148 GLU 148 148 148 GLU GLU B . n B 1 149 ASN 149 149 149 ASN ASN B . n B 1 150 ILE 150 150 150 ILE ILE B . n B 1 151 LEU 151 151 151 LEU LEU B . n B 1 152 GLN 152 152 152 GLN GLN B . n B 1 153 LEU 153 153 153 LEU LEU B . n B 1 154 SER 154 154 154 SER SER B . n B 1 155 ASN 155 155 155 ASN ASN B . n B 1 156 ASP 156 156 156 ASP ASP B . n B 1 157 ILE 157 157 157 ILE ILE B . n B 1 158 ARG 158 158 158 ARG ARG B . n B 1 159 GLU 159 159 159 GLU GLU B . n B 1 160 ARG 160 160 160 ARG ARG B . n B 1 161 TYR 161 161 ? ? ? B . n B 1 162 LEU 162 162 ? ? ? B . n B 1 163 LYS 163 163 ? ? ? B . n B 1 164 HIS 164 164 ? ? ? B . n B 1 165 HIS 165 165 ? ? ? B . n B 1 166 HIS 166 166 ? ? ? B . n B 1 167 HIS 167 167 ? ? ? B . n B 1 168 HIS 168 168 ? ? ? B . n B 1 169 HIS 169 169 ? ? ? B . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A CSO 93 A CSO 93 ? CYS S-HYDROXYCYSTEINE 2 B CSO 93 B CSO 93 ? CYS S-HYDROXYCYSTEINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 B 2 1,2 A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1500 ? 1 MORE -12.8 ? 1 'SSA (A^2)' 13750 ? 2 'ABSA (A^2)' 1520 ? 2 MORE -12.7 ? 2 'SSA (A^2)' 13690 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-01-21 2 'Structure model' 1 1 2015-01-28 3 'Structure model' 1 2 2015-02-04 4 'Structure model' 1 3 2015-03-25 5 'Structure model' 1 4 2019-05-08 6 'Structure model' 1 5 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Experimental preparation' 7 5 'Structure model' Other 8 6 'Structure model' 'Data collection' 9 6 'Structure model' 'Database references' 10 6 'Structure model' Other 11 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' database_PDB_rev 2 5 'Structure model' database_PDB_rev_record 3 5 'Structure model' exptl_crystal_grow 4 5 'Structure model' pdbx_database_proc 5 5 'Structure model' pdbx_database_status 6 5 'Structure model' struct_conn 7 6 'Structure model' chem_comp_atom 8 6 'Structure model' chem_comp_bond 9 6 'Structure model' database_2 10 6 'Structure model' pdbx_database_status 11 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_exptl_crystal_grow.temp' 2 5 'Structure model' '_pdbx_database_status.recvd_author_approval' 3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 6 'Structure model' '_database_2.pdbx_DOI' 5 6 'Structure model' '_database_2.pdbx_database_accession' 6 6 'Structure model' '_pdbx_database_status.status_code_sf' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 14.2240 22.3720 14.2160 0.4335 0.1998 0.0528 0.1427 0.0890 -0.0218 8.2594 3.6934 3.2009 1.9435 -1.3071 0.1426 0.6486 0.1365 0.1207 0.4755 -0.4249 0.2750 -0.1054 -0.0881 -0.2237 'X-RAY DIFFRACTION' 2 ? refined -20.9820 -11.7380 13.8990 0.6374 0.1666 0.1008 0.0991 0.1557 -0.0286 7.9475 4.3054 3.3129 2.8606 0.6180 0.6065 0.6974 0.1152 0.4614 0.9064 -0.4707 0.4892 0.4062 0.1193 -0.2266 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 18 ? ? A 160 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 18 ? ? B 160 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.8.0073 ? 1 HKL-2000 'data reduction' . ? 2 HKL-2000 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_entry_details.entry_id 4D5S _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'CARRIES C-TERMINAL KH6 PURIFICATION TAG' _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 31 ? ? -55.52 -71.42 2 1 ASN A 76 ? ? 79.39 -10.98 3 1 VAL B 31 ? ? -54.62 -71.99 4 1 ASN B 76 ? ? 78.46 -10.52 5 1 ASP B 141 ? ? -160.69 100.10 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 45 ? CG ? A LYS 45 CG 2 1 Y 1 A LYS 45 ? CD ? A LYS 45 CD 3 1 Y 1 A LYS 45 ? CE ? A LYS 45 CE 4 1 Y 1 A LYS 45 ? NZ ? A LYS 45 NZ 5 1 Y 1 A GLU 75 ? CG ? A GLU 75 CG 6 1 Y 1 A GLU 75 ? CD ? A GLU 75 CD 7 1 Y 1 A GLU 75 ? OE1 ? A GLU 75 OE1 8 1 Y 1 A GLU 75 ? OE2 ? A GLU 75 OE2 9 1 Y 1 A ASN 76 ? CG ? A ASN 76 CG 10 1 Y 1 A ASN 76 ? OD1 ? A ASN 76 OD1 11 1 Y 1 A ASN 76 ? ND2 ? A ASN 76 ND2 12 1 Y 1 A ARG 160 ? CG ? A ARG 160 CG 13 1 Y 1 A ARG 160 ? CD ? A ARG 160 CD 14 1 Y 1 A ARG 160 ? NE ? A ARG 160 NE 15 1 Y 1 A ARG 160 ? CZ ? A ARG 160 CZ 16 1 Y 1 A ARG 160 ? NH1 ? A ARG 160 NH1 17 1 Y 1 A ARG 160 ? NH2 ? A ARG 160 NH2 18 1 Y 1 B LYS 45 ? CG ? B LYS 45 CG 19 1 Y 1 B LYS 45 ? CD ? B LYS 45 CD 20 1 Y 1 B LYS 45 ? CE ? B LYS 45 CE 21 1 Y 1 B LYS 45 ? NZ ? B LYS 45 NZ 22 1 Y 1 B GLU 75 ? CG ? B GLU 75 CG 23 1 Y 1 B GLU 75 ? CD ? B GLU 75 CD 24 1 Y 1 B GLU 75 ? OE1 ? B GLU 75 OE1 25 1 Y 1 B GLU 75 ? OE2 ? B GLU 75 OE2 26 1 Y 1 B ASN 76 ? CG ? B ASN 76 CG 27 1 Y 1 B ASN 76 ? OD1 ? B ASN 76 OD1 28 1 Y 1 B ASN 76 ? ND2 ? B ASN 76 ND2 29 1 Y 1 B ARG 160 ? CG ? B ARG 160 CG 30 1 Y 1 B ARG 160 ? CD ? B ARG 160 CD 31 1 Y 1 B ARG 160 ? NE ? B ARG 160 NE 32 1 Y 1 B ARG 160 ? CZ ? B ARG 160 CZ 33 1 Y 1 B ARG 160 ? NH1 ? B ARG 160 NH1 34 1 Y 1 B ARG 160 ? NH2 ? B ARG 160 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ASP 2 ? A ASP 2 3 1 Y 1 A GLU 3 ? A GLU 3 4 1 Y 1 A ALA 4 ? A ALA 4 5 1 Y 1 A TYR 5 ? A TYR 5 6 1 Y 1 A TYR 6 ? A TYR 6 7 1 Y 1 A SER 7 ? A SER 7 8 1 Y 1 A GLY 8 ? A GLY 8 9 1 Y 1 A ASN 9 ? A ASN 9 10 1 Y 1 A LEU 10 ? A LEU 10 11 1 Y 1 A GLU 11 ? A GLU 11 12 1 Y 1 A SER 12 ? A SER 12 13 1 Y 1 A VAL 13 ? A VAL 13 14 1 Y 1 A LEU 14 ? A LEU 14 15 1 Y 1 A GLY 15 ? A GLY 15 16 1 Y 1 A TYR 16 ? A TYR 16 17 1 Y 1 A VAL 17 ? A VAL 17 18 1 Y 1 A TYR 161 ? A TYR 161 19 1 Y 1 A LEU 162 ? A LEU 162 20 1 Y 1 A LYS 163 ? A LYS 163 21 1 Y 1 A HIS 164 ? A HIS 164 22 1 Y 1 A HIS 165 ? A HIS 165 23 1 Y 1 A HIS 166 ? A HIS 166 24 1 Y 1 A HIS 167 ? A HIS 167 25 1 Y 1 A HIS 168 ? A HIS 168 26 1 Y 1 A HIS 169 ? A HIS 169 27 1 Y 1 B MET 1 ? B MET 1 28 1 Y 1 B ASP 2 ? B ASP 2 29 1 Y 1 B GLU 3 ? B GLU 3 30 1 Y 1 B ALA 4 ? B ALA 4 31 1 Y 1 B TYR 5 ? B TYR 5 32 1 Y 1 B TYR 6 ? B TYR 6 33 1 Y 1 B SER 7 ? B SER 7 34 1 Y 1 B GLY 8 ? B GLY 8 35 1 Y 1 B ASN 9 ? B ASN 9 36 1 Y 1 B LEU 10 ? B LEU 10 37 1 Y 1 B GLU 11 ? B GLU 11 38 1 Y 1 B SER 12 ? B SER 12 39 1 Y 1 B VAL 13 ? B VAL 13 40 1 Y 1 B LEU 14 ? B LEU 14 41 1 Y 1 B GLY 15 ? B GLY 15 42 1 Y 1 B TYR 16 ? B TYR 16 43 1 Y 1 B VAL 17 ? B VAL 17 44 1 Y 1 B TYR 161 ? B TYR 161 45 1 Y 1 B LEU 162 ? B LEU 162 46 1 Y 1 B LYS 163 ? B LYS 163 47 1 Y 1 B HIS 164 ? B HIS 164 48 1 Y 1 B HIS 165 ? B HIS 165 49 1 Y 1 B HIS 166 ? B HIS 166 50 1 Y 1 B HIS 167 ? B HIS 167 51 1 Y 1 B HIS 168 ? B HIS 168 52 1 Y 1 B HIS 169 ? B HIS 169 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CSO N N N N 74 CSO CA C N R 75 CSO CB C N N 76 CSO SG S N N 77 CSO C C N N 78 CSO O O N N 79 CSO OXT O N N 80 CSO OD O N N 81 CSO H H N N 82 CSO H2 H N N 83 CSO HA H N N 84 CSO HB2 H N N 85 CSO HB3 H N N 86 CSO HXT H N N 87 CSO HD H N N 88 CYS N N N N 89 CYS CA C N R 90 CYS C C N N 91 CYS O O N N 92 CYS CB C N N 93 CYS SG S N N 94 CYS OXT O N N 95 CYS H H N N 96 CYS H2 H N N 97 CYS HA H N N 98 CYS HB2 H N N 99 CYS HB3 H N N 100 CYS HG H N N 101 CYS HXT H N N 102 GLN N N N N 103 GLN CA C N S 104 GLN C C N N 105 GLN O O N N 106 GLN CB C N N 107 GLN CG C N N 108 GLN CD C N N 109 GLN OE1 O N N 110 GLN NE2 N N N 111 GLN OXT O N N 112 GLN H H N N 113 GLN H2 H N N 114 GLN HA H N N 115 GLN HB2 H N N 116 GLN HB3 H N N 117 GLN HG2 H N N 118 GLN HG3 H N N 119 GLN HE21 H N N 120 GLN HE22 H N N 121 GLN HXT H N N 122 GLU N N N N 123 GLU CA C N S 124 GLU C C N N 125 GLU O O N N 126 GLU CB C N N 127 GLU CG C N N 128 GLU CD C N N 129 GLU OE1 O N N 130 GLU OE2 O N N 131 GLU OXT O N N 132 GLU H H N N 133 GLU H2 H N N 134 GLU HA H N N 135 GLU HB2 H N N 136 GLU HB3 H N N 137 GLU HG2 H N N 138 GLU HG3 H N N 139 GLU HE2 H N N 140 GLU HXT H N N 141 GLY N N N N 142 GLY CA C N N 143 GLY C C N N 144 GLY O O N N 145 GLY OXT O N N 146 GLY H H N N 147 GLY H2 H N N 148 GLY HA2 H N N 149 GLY HA3 H N N 150 GLY HXT H N N 151 HIS N N N N 152 HIS CA C N S 153 HIS C C N N 154 HIS O O N N 155 HIS CB C N N 156 HIS CG C Y N 157 HIS ND1 N Y N 158 HIS CD2 C Y N 159 HIS CE1 C Y N 160 HIS NE2 N Y N 161 HIS OXT O N N 162 HIS H H N N 163 HIS H2 H N N 164 HIS HA H N N 165 HIS HB2 H N N 166 HIS HB3 H N N 167 HIS HD1 H N N 168 HIS HD2 H N N 169 HIS HE1 H N N 170 HIS HE2 H N N 171 HIS HXT H N N 172 ILE N N N N 173 ILE CA C N S 174 ILE C C N N 175 ILE O O N N 176 ILE CB C N S 177 ILE CG1 C N N 178 ILE CG2 C N N 179 ILE CD1 C N N 180 ILE OXT O N N 181 ILE H H N N 182 ILE H2 H N N 183 ILE HA H N N 184 ILE HB H N N 185 ILE HG12 H N N 186 ILE HG13 H N N 187 ILE HG21 H N N 188 ILE HG22 H N N 189 ILE HG23 H N N 190 ILE HD11 H N N 191 ILE HD12 H N N 192 ILE HD13 H N N 193 ILE HXT H N N 194 LEU N N N N 195 LEU CA C N S 196 LEU C C N N 197 LEU O O N N 198 LEU CB C N N 199 LEU CG C N N 200 LEU CD1 C N N 201 LEU CD2 C N N 202 LEU OXT O N N 203 LEU H H N N 204 LEU H2 H N N 205 LEU HA H N N 206 LEU HB2 H N N 207 LEU HB3 H N N 208 LEU HG H N N 209 LEU HD11 H N N 210 LEU HD12 H N N 211 LEU HD13 H N N 212 LEU HD21 H N N 213 LEU HD22 H N N 214 LEU HD23 H N N 215 LEU HXT H N N 216 LYS N N N N 217 LYS CA C N S 218 LYS C C N N 219 LYS O O N N 220 LYS CB C N N 221 LYS CG C N N 222 LYS CD C N N 223 LYS CE C N N 224 LYS NZ N N N 225 LYS OXT O N N 226 LYS H H N N 227 LYS H2 H N N 228 LYS HA H N N 229 LYS HB2 H N N 230 LYS HB3 H N N 231 LYS HG2 H N N 232 LYS HG3 H N N 233 LYS HD2 H N N 234 LYS HD3 H N N 235 LYS HE2 H N N 236 LYS HE3 H N N 237 LYS HZ1 H N N 238 LYS HZ2 H N N 239 LYS HZ3 H N N 240 LYS HXT H N N 241 MET N N N N 242 MET CA C N S 243 MET C C N N 244 MET O O N N 245 MET CB C N N 246 MET CG C N N 247 MET SD S N N 248 MET CE C N N 249 MET OXT O N N 250 MET H H N N 251 MET H2 H N N 252 MET HA H N N 253 MET HB2 H N N 254 MET HB3 H N N 255 MET HG2 H N N 256 MET HG3 H N N 257 MET HE1 H N N 258 MET HE2 H N N 259 MET HE3 H N N 260 MET HXT H N N 261 PHE N N N N 262 PHE CA C N S 263 PHE C C N N 264 PHE O O N N 265 PHE CB C N N 266 PHE CG C Y N 267 PHE CD1 C Y N 268 PHE CD2 C Y N 269 PHE CE1 C Y N 270 PHE CE2 C Y N 271 PHE CZ C Y N 272 PHE OXT O N N 273 PHE H H N N 274 PHE H2 H N N 275 PHE HA H N N 276 PHE HB2 H N N 277 PHE HB3 H N N 278 PHE HD1 H N N 279 PHE HD2 H N N 280 PHE HE1 H N N 281 PHE HE2 H N N 282 PHE HZ H N N 283 PHE HXT H N N 284 PRO N N N N 285 PRO CA C N S 286 PRO C C N N 287 PRO O O N N 288 PRO CB C N N 289 PRO CG C N N 290 PRO CD C N N 291 PRO OXT O N N 292 PRO H H N N 293 PRO HA H N N 294 PRO HB2 H N N 295 PRO HB3 H N N 296 PRO HG2 H N N 297 PRO HG3 H N N 298 PRO HD2 H N N 299 PRO HD3 H N N 300 PRO HXT H N N 301 SER N N N N 302 SER CA C N S 303 SER C C N N 304 SER O O N N 305 SER CB C N N 306 SER OG O N N 307 SER OXT O N N 308 SER H H N N 309 SER H2 H N N 310 SER HA H N N 311 SER HB2 H N N 312 SER HB3 H N N 313 SER HG H N N 314 SER HXT H N N 315 THR N N N N 316 THR CA C N S 317 THR C C N N 318 THR O O N N 319 THR CB C N R 320 THR OG1 O N N 321 THR CG2 C N N 322 THR OXT O N N 323 THR H H N N 324 THR H2 H N N 325 THR HA H N N 326 THR HB H N N 327 THR HG1 H N N 328 THR HG21 H N N 329 THR HG22 H N N 330 THR HG23 H N N 331 THR HXT H N N 332 TYR N N N N 333 TYR CA C N S 334 TYR C C N N 335 TYR O O N N 336 TYR CB C N N 337 TYR CG C Y N 338 TYR CD1 C Y N 339 TYR CD2 C Y N 340 TYR CE1 C Y N 341 TYR CE2 C Y N 342 TYR CZ C Y N 343 TYR OH O N N 344 TYR OXT O N N 345 TYR H H N N 346 TYR H2 H N N 347 TYR HA H N N 348 TYR HB2 H N N 349 TYR HB3 H N N 350 TYR HD1 H N N 351 TYR HD2 H N N 352 TYR HE1 H N N 353 TYR HE2 H N N 354 TYR HH H N N 355 TYR HXT H N N 356 VAL N N N N 357 VAL CA C N S 358 VAL C C N N 359 VAL O O N N 360 VAL CB C N N 361 VAL CG1 C N N 362 VAL CG2 C N N 363 VAL OXT O N N 364 VAL H H N N 365 VAL H2 H N N 366 VAL HA H N N 367 VAL HB H N N 368 VAL HG11 H N N 369 VAL HG12 H N N 370 VAL HG13 H N N 371 VAL HG21 H N N 372 VAL HG22 H N N 373 VAL HG23 H N N 374 VAL HXT H N N 375 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CSO N CA sing N N 70 CSO N H sing N N 71 CSO N H2 sing N N 72 CSO CA CB sing N N 73 CSO CA C sing N N 74 CSO CA HA sing N N 75 CSO CB SG sing N N 76 CSO CB HB2 sing N N 77 CSO CB HB3 sing N N 78 CSO SG OD sing N N 79 CSO C O doub N N 80 CSO C OXT sing N N 81 CSO OXT HXT sing N N 82 CSO OD HD sing N N 83 CYS N CA sing N N 84 CYS N H sing N N 85 CYS N H2 sing N N 86 CYS CA C sing N N 87 CYS CA CB sing N N 88 CYS CA HA sing N N 89 CYS C O doub N N 90 CYS C OXT sing N N 91 CYS CB SG sing N N 92 CYS CB HB2 sing N N 93 CYS CB HB3 sing N N 94 CYS SG HG sing N N 95 CYS OXT HXT sing N N 96 GLN N CA sing N N 97 GLN N H sing N N 98 GLN N H2 sing N N 99 GLN CA C sing N N 100 GLN CA CB sing N N 101 GLN CA HA sing N N 102 GLN C O doub N N 103 GLN C OXT sing N N 104 GLN CB CG sing N N 105 GLN CB HB2 sing N N 106 GLN CB HB3 sing N N 107 GLN CG CD sing N N 108 GLN CG HG2 sing N N 109 GLN CG HG3 sing N N 110 GLN CD OE1 doub N N 111 GLN CD NE2 sing N N 112 GLN NE2 HE21 sing N N 113 GLN NE2 HE22 sing N N 114 GLN OXT HXT sing N N 115 GLU N CA sing N N 116 GLU N H sing N N 117 GLU N H2 sing N N 118 GLU CA C sing N N 119 GLU CA CB sing N N 120 GLU CA HA sing N N 121 GLU C O doub N N 122 GLU C OXT sing N N 123 GLU CB CG sing N N 124 GLU CB HB2 sing N N 125 GLU CB HB3 sing N N 126 GLU CG CD sing N N 127 GLU CG HG2 sing N N 128 GLU CG HG3 sing N N 129 GLU CD OE1 doub N N 130 GLU CD OE2 sing N N 131 GLU OE2 HE2 sing N N 132 GLU OXT HXT sing N N 133 GLY N CA sing N N 134 GLY N H sing N N 135 GLY N H2 sing N N 136 GLY CA C sing N N 137 GLY CA HA2 sing N N 138 GLY CA HA3 sing N N 139 GLY C O doub N N 140 GLY C OXT sing N N 141 GLY OXT HXT sing N N 142 HIS N CA sing N N 143 HIS N H sing N N 144 HIS N H2 sing N N 145 HIS CA C sing N N 146 HIS CA CB sing N N 147 HIS CA HA sing N N 148 HIS C O doub N N 149 HIS C OXT sing N N 150 HIS CB CG sing N N 151 HIS CB HB2 sing N N 152 HIS CB HB3 sing N N 153 HIS CG ND1 sing Y N 154 HIS CG CD2 doub Y N 155 HIS ND1 CE1 doub Y N 156 HIS ND1 HD1 sing N N 157 HIS CD2 NE2 sing Y N 158 HIS CD2 HD2 sing N N 159 HIS CE1 NE2 sing Y N 160 HIS CE1 HE1 sing N N 161 HIS NE2 HE2 sing N N 162 HIS OXT HXT sing N N 163 ILE N CA sing N N 164 ILE N H sing N N 165 ILE N H2 sing N N 166 ILE CA C sing N N 167 ILE CA CB sing N N 168 ILE CA HA sing N N 169 ILE C O doub N N 170 ILE C OXT sing N N 171 ILE CB CG1 sing N N 172 ILE CB CG2 sing N N 173 ILE CB HB sing N N 174 ILE CG1 CD1 sing N N 175 ILE CG1 HG12 sing N N 176 ILE CG1 HG13 sing N N 177 ILE CG2 HG21 sing N N 178 ILE CG2 HG22 sing N N 179 ILE CG2 HG23 sing N N 180 ILE CD1 HD11 sing N N 181 ILE CD1 HD12 sing N N 182 ILE CD1 HD13 sing N N 183 ILE OXT HXT sing N N 184 LEU N CA sing N N 185 LEU N H sing N N 186 LEU N H2 sing N N 187 LEU CA C sing N N 188 LEU CA CB sing N N 189 LEU CA HA sing N N 190 LEU C O doub N N 191 LEU C OXT sing N N 192 LEU CB CG sing N N 193 LEU CB HB2 sing N N 194 LEU CB HB3 sing N N 195 LEU CG CD1 sing N N 196 LEU CG CD2 sing N N 197 LEU CG HG sing N N 198 LEU CD1 HD11 sing N N 199 LEU CD1 HD12 sing N N 200 LEU CD1 HD13 sing N N 201 LEU CD2 HD21 sing N N 202 LEU CD2 HD22 sing N N 203 LEU CD2 HD23 sing N N 204 LEU OXT HXT sing N N 205 LYS N CA sing N N 206 LYS N H sing N N 207 LYS N H2 sing N N 208 LYS CA C sing N N 209 LYS CA CB sing N N 210 LYS CA HA sing N N 211 LYS C O doub N N 212 LYS C OXT sing N N 213 LYS CB CG sing N N 214 LYS CB HB2 sing N N 215 LYS CB HB3 sing N N 216 LYS CG CD sing N N 217 LYS CG HG2 sing N N 218 LYS CG HG3 sing N N 219 LYS CD CE sing N N 220 LYS CD HD2 sing N N 221 LYS CD HD3 sing N N 222 LYS CE NZ sing N N 223 LYS CE HE2 sing N N 224 LYS CE HE3 sing N N 225 LYS NZ HZ1 sing N N 226 LYS NZ HZ2 sing N N 227 LYS NZ HZ3 sing N N 228 LYS OXT HXT sing N N 229 MET N CA sing N N 230 MET N H sing N N 231 MET N H2 sing N N 232 MET CA C sing N N 233 MET CA CB sing N N 234 MET CA HA sing N N 235 MET C O doub N N 236 MET C OXT sing N N 237 MET CB CG sing N N 238 MET CB HB2 sing N N 239 MET CB HB3 sing N N 240 MET CG SD sing N N 241 MET CG HG2 sing N N 242 MET CG HG3 sing N N 243 MET SD CE sing N N 244 MET CE HE1 sing N N 245 MET CE HE2 sing N N 246 MET CE HE3 sing N N 247 MET OXT HXT sing N N 248 PHE N CA sing N N 249 PHE N H sing N N 250 PHE N H2 sing N N 251 PHE CA C sing N N 252 PHE CA CB sing N N 253 PHE CA HA sing N N 254 PHE C O doub N N 255 PHE C OXT sing N N 256 PHE CB CG sing N N 257 PHE CB HB2 sing N N 258 PHE CB HB3 sing N N 259 PHE CG CD1 doub Y N 260 PHE CG CD2 sing Y N 261 PHE CD1 CE1 sing Y N 262 PHE CD1 HD1 sing N N 263 PHE CD2 CE2 doub Y N 264 PHE CD2 HD2 sing N N 265 PHE CE1 CZ doub Y N 266 PHE CE1 HE1 sing N N 267 PHE CE2 CZ sing Y N 268 PHE CE2 HE2 sing N N 269 PHE CZ HZ sing N N 270 PHE OXT HXT sing N N 271 PRO N CA sing N N 272 PRO N CD sing N N 273 PRO N H sing N N 274 PRO CA C sing N N 275 PRO CA CB sing N N 276 PRO CA HA sing N N 277 PRO C O doub N N 278 PRO C OXT sing N N 279 PRO CB CG sing N N 280 PRO CB HB2 sing N N 281 PRO CB HB3 sing N N 282 PRO CG CD sing N N 283 PRO CG HG2 sing N N 284 PRO CG HG3 sing N N 285 PRO CD HD2 sing N N 286 PRO CD HD3 sing N N 287 PRO OXT HXT sing N N 288 SER N CA sing N N 289 SER N H sing N N 290 SER N H2 sing N N 291 SER CA C sing N N 292 SER CA CB sing N N 293 SER CA HA sing N N 294 SER C O doub N N 295 SER C OXT sing N N 296 SER CB OG sing N N 297 SER CB HB2 sing N N 298 SER CB HB3 sing N N 299 SER OG HG sing N N 300 SER OXT HXT sing N N 301 THR N CA sing N N 302 THR N H sing N N 303 THR N H2 sing N N 304 THR CA C sing N N 305 THR CA CB sing N N 306 THR CA HA sing N N 307 THR C O doub N N 308 THR C OXT sing N N 309 THR CB OG1 sing N N 310 THR CB CG2 sing N N 311 THR CB HB sing N N 312 THR OG1 HG1 sing N N 313 THR CG2 HG21 sing N N 314 THR CG2 HG22 sing N N 315 THR CG2 HG23 sing N N 316 THR OXT HXT sing N N 317 TYR N CA sing N N 318 TYR N H sing N N 319 TYR N H2 sing N N 320 TYR CA C sing N N 321 TYR CA CB sing N N 322 TYR CA HA sing N N 323 TYR C O doub N N 324 TYR C OXT sing N N 325 TYR CB CG sing N N 326 TYR CB HB2 sing N N 327 TYR CB HB3 sing N N 328 TYR CG CD1 doub Y N 329 TYR CG CD2 sing Y N 330 TYR CD1 CE1 sing Y N 331 TYR CD1 HD1 sing N N 332 TYR CD2 CE2 doub Y N 333 TYR CD2 HD2 sing N N 334 TYR CE1 CZ doub Y N 335 TYR CE1 HE1 sing N N 336 TYR CE2 CZ sing Y N 337 TYR CE2 HE2 sing N N 338 TYR CZ OH sing N N 339 TYR OH HH sing N N 340 TYR OXT HXT sing N N 341 VAL N CA sing N N 342 VAL N H sing N N 343 VAL N H2 sing N N 344 VAL CA C sing N N 345 VAL CA CB sing N N 346 VAL CA HA sing N N 347 VAL C O doub N N 348 VAL C OXT sing N N 349 VAL CB CG1 sing N N 350 VAL CB CG2 sing N N 351 VAL CB HB sing N N 352 VAL CG1 HG11 sing N N 353 VAL CG1 HG12 sing N N 354 VAL CG1 HG13 sing N N 355 VAL CG2 HG21 sing N N 356 VAL CG2 HG22 sing N N 357 VAL CG2 HG23 sing N N 358 VAL OXT HXT sing N N 359 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4D5R _pdbx_initial_refinement_model.details 'PDB ENTRY 4D5R' #