data_4D8S # _entry.id 4D8S # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4D8S RCSB RCSB070025 WWPDB D_1000070025 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4D8S _pdbx_database_status.recvd_initial_deposition_date 2012-01-11 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kerry, P.S.' 1 'Russell, R.J.M.R.' 2 # _citation.id primary _citation.title 'Exploring the interactions of unsaturated glucuronides with influenza virus sialidase.' _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 55 _citation.page_first 8963 _citation.page_last 8968 _citation.year 2012 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23017008 _citation.pdbx_database_id_DOI 10.1021/jm301145k # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bhatt, B.' 1 ? primary 'Bohm, R.' 2 ? primary 'Kerry, P.S.' 3 ? primary 'Dyason, J.C.' 4 ? primary 'Russell, R.J.' 5 ? primary 'Thomson, R.J.' 6 ? primary 'von Itzstein, M.' 7 ? # _cell.entry_id 4D8S _cell.length_a 89.388 _cell.length_b 89.388 _cell.length_c 94.754 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4D8S _symmetry.space_group_name_H-M 'I 4' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Neuraminidase 43214.566 1 3.2.1.18 G293N ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 non-polymer man 'pentan-3-yl 2-acetamido-2,4-dideoxy-alpha-L-threo-hex-4-enopyranosiduronic acid' 287.309 1 ? ? ? ? 4 water nat water 18.015 89 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TYMNNTEAICDAKGFAPFSKDNGIRIGSRGHIFVIREPFVSCSPIECRTFFLTQGSLLNDKHSNGTVKDRSPFRTLMSVE VGQSPNVYQARFEAVAWSATACHDGKKWMTVGVTGPDSKAVAVIHYGGVPTDVVNSWAGDILRTQESSCTCIQGDCYWVM TDGPANRQAQYRIYKANQGRIIGQTDISFNGGHIEECSCYPNDGKVECVCRDNWTGTNRPVLVISPDLSYRVGYLCAGIP SDTPRGEDTQFTGSCTSPMGNQGYGVKGFGFRQGTDVWMGRTISRTSRSGFEILRIKNGWTQTSKEQIRKQVVVDNLNWS GYSGSFTLPVELSGKDCLVPCFWVEMIRGKPEEKTIWTSSSSIVMCGVDYEVADWSWHDGAILPFDIDKM ; _entity_poly.pdbx_seq_one_letter_code_can ;TYMNNTEAICDAKGFAPFSKDNGIRIGSRGHIFVIREPFVSCSPIECRTFFLTQGSLLNDKHSNGTVKDRSPFRTLMSVE VGQSPNVYQARFEAVAWSATACHDGKKWMTVGVTGPDSKAVAVIHYGGVPTDVVNSWAGDILRTQESSCTCIQGDCYWVM TDGPANRQAQYRIYKANQGRIIGQTDISFNGGHIEECSCYPNDGKVECVCRDNWTGTNRPVLVISPDLSYRVGYLCAGIP SDTPRGEDTQFTGSCTSPMGNQGYGVKGFGFRQGTDVWMGRTISRTSRSGFEILRIKNGWTQTSKEQIRKQVVVDNLNWS GYSGSFTLPVELSGKDCLVPCFWVEMIRGKPEEKTIWTSSSSIVMCGVDYEVADWSWHDGAILPFDIDKM ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 TYR n 1 3 MET n 1 4 ASN n 1 5 ASN n 1 6 THR n 1 7 GLU n 1 8 ALA n 1 9 ILE n 1 10 CYS n 1 11 ASP n 1 12 ALA n 1 13 LYS n 1 14 GLY n 1 15 PHE n 1 16 ALA n 1 17 PRO n 1 18 PHE n 1 19 SER n 1 20 LYS n 1 21 ASP n 1 22 ASN n 1 23 GLY n 1 24 ILE n 1 25 ARG n 1 26 ILE n 1 27 GLY n 1 28 SER n 1 29 ARG n 1 30 GLY n 1 31 HIS n 1 32 ILE n 1 33 PHE n 1 34 VAL n 1 35 ILE n 1 36 ARG n 1 37 GLU n 1 38 PRO n 1 39 PHE n 1 40 VAL n 1 41 SER n 1 42 CYS n 1 43 SER n 1 44 PRO n 1 45 ILE n 1 46 GLU n 1 47 CYS n 1 48 ARG n 1 49 THR n 1 50 PHE n 1 51 PHE n 1 52 LEU n 1 53 THR n 1 54 GLN n 1 55 GLY n 1 56 SER n 1 57 LEU n 1 58 LEU n 1 59 ASN n 1 60 ASP n 1 61 LYS n 1 62 HIS n 1 63 SER n 1 64 ASN n 1 65 GLY n 1 66 THR n 1 67 VAL n 1 68 LYS n 1 69 ASP n 1 70 ARG n 1 71 SER n 1 72 PRO n 1 73 PHE n 1 74 ARG n 1 75 THR n 1 76 LEU n 1 77 MET n 1 78 SER n 1 79 VAL n 1 80 GLU n 1 81 VAL n 1 82 GLY n 1 83 GLN n 1 84 SER n 1 85 PRO n 1 86 ASN n 1 87 VAL n 1 88 TYR n 1 89 GLN n 1 90 ALA n 1 91 ARG n 1 92 PHE n 1 93 GLU n 1 94 ALA n 1 95 VAL n 1 96 ALA n 1 97 TRP n 1 98 SER n 1 99 ALA n 1 100 THR n 1 101 ALA n 1 102 CYS n 1 103 HIS n 1 104 ASP n 1 105 GLY n 1 106 LYS n 1 107 LYS n 1 108 TRP n 1 109 MET n 1 110 THR n 1 111 VAL n 1 112 GLY n 1 113 VAL n 1 114 THR n 1 115 GLY n 1 116 PRO n 1 117 ASP n 1 118 SER n 1 119 LYS n 1 120 ALA n 1 121 VAL n 1 122 ALA n 1 123 VAL n 1 124 ILE n 1 125 HIS n 1 126 TYR n 1 127 GLY n 1 128 GLY n 1 129 VAL n 1 130 PRO n 1 131 THR n 1 132 ASP n 1 133 VAL n 1 134 VAL n 1 135 ASN n 1 136 SER n 1 137 TRP n 1 138 ALA n 1 139 GLY n 1 140 ASP n 1 141 ILE n 1 142 LEU n 1 143 ARG n 1 144 THR n 1 145 GLN n 1 146 GLU n 1 147 SER n 1 148 SER n 1 149 CYS n 1 150 THR n 1 151 CYS n 1 152 ILE n 1 153 GLN n 1 154 GLY n 1 155 ASP n 1 156 CYS n 1 157 TYR n 1 158 TRP n 1 159 VAL n 1 160 MET n 1 161 THR n 1 162 ASP n 1 163 GLY n 1 164 PRO n 1 165 ALA n 1 166 ASN n 1 167 ARG n 1 168 GLN n 1 169 ALA n 1 170 GLN n 1 171 TYR n 1 172 ARG n 1 173 ILE n 1 174 TYR n 1 175 LYS n 1 176 ALA n 1 177 ASN n 1 178 GLN n 1 179 GLY n 1 180 ARG n 1 181 ILE n 1 182 ILE n 1 183 GLY n 1 184 GLN n 1 185 THR n 1 186 ASP n 1 187 ILE n 1 188 SER n 1 189 PHE n 1 190 ASN n 1 191 GLY n 1 192 GLY n 1 193 HIS n 1 194 ILE n 1 195 GLU n 1 196 GLU n 1 197 CYS n 1 198 SER n 1 199 CYS n 1 200 TYR n 1 201 PRO n 1 202 ASN n 1 203 ASP n 1 204 GLY n 1 205 LYS n 1 206 VAL n 1 207 GLU n 1 208 CYS n 1 209 VAL n 1 210 CYS n 1 211 ARG n 1 212 ASP n 1 213 ASN n 1 214 TRP n 1 215 THR n 1 216 GLY n 1 217 THR n 1 218 ASN n 1 219 ARG n 1 220 PRO n 1 221 VAL n 1 222 LEU n 1 223 VAL n 1 224 ILE n 1 225 SER n 1 226 PRO n 1 227 ASP n 1 228 LEU n 1 229 SER n 1 230 TYR n 1 231 ARG n 1 232 VAL n 1 233 GLY n 1 234 TYR n 1 235 LEU n 1 236 CYS n 1 237 ALA n 1 238 GLY n 1 239 ILE n 1 240 PRO n 1 241 SER n 1 242 ASP n 1 243 THR n 1 244 PRO n 1 245 ARG n 1 246 GLY n 1 247 GLU n 1 248 ASP n 1 249 THR n 1 250 GLN n 1 251 PHE n 1 252 THR n 1 253 GLY n 1 254 SER n 1 255 CYS n 1 256 THR n 1 257 SER n 1 258 PRO n 1 259 MET n 1 260 GLY n 1 261 ASN n 1 262 GLN n 1 263 GLY n 1 264 TYR n 1 265 GLY n 1 266 VAL n 1 267 LYS n 1 268 GLY n 1 269 PHE n 1 270 GLY n 1 271 PHE n 1 272 ARG n 1 273 GLN n 1 274 GLY n 1 275 THR n 1 276 ASP n 1 277 VAL n 1 278 TRP n 1 279 MET n 1 280 GLY n 1 281 ARG n 1 282 THR n 1 283 ILE n 1 284 SER n 1 285 ARG n 1 286 THR n 1 287 SER n 1 288 ARG n 1 289 SER n 1 290 GLY n 1 291 PHE n 1 292 GLU n 1 293 ILE n 1 294 LEU n 1 295 ARG n 1 296 ILE n 1 297 LYS n 1 298 ASN n 1 299 GLY n 1 300 TRP n 1 301 THR n 1 302 GLN n 1 303 THR n 1 304 SER n 1 305 LYS n 1 306 GLU n 1 307 GLN n 1 308 ILE n 1 309 ARG n 1 310 LYS n 1 311 GLN n 1 312 VAL n 1 313 VAL n 1 314 VAL n 1 315 ASP n 1 316 ASN n 1 317 LEU n 1 318 ASN n 1 319 TRP n 1 320 SER n 1 321 GLY n 1 322 TYR n 1 323 SER n 1 324 GLY n 1 325 SER n 1 326 PHE n 1 327 THR n 1 328 LEU n 1 329 PRO n 1 330 VAL n 1 331 GLU n 1 332 LEU n 1 333 SER n 1 334 GLY n 1 335 LYS n 1 336 ASP n 1 337 CYS n 1 338 LEU n 1 339 VAL n 1 340 PRO n 1 341 CYS n 1 342 PHE n 1 343 TRP n 1 344 VAL n 1 345 GLU n 1 346 MET n 1 347 ILE n 1 348 ARG n 1 349 GLY n 1 350 LYS n 1 351 PRO n 1 352 GLU n 1 353 GLU n 1 354 LYS n 1 355 THR n 1 356 ILE n 1 357 TRP n 1 358 THR n 1 359 SER n 1 360 SER n 1 361 SER n 1 362 SER n 1 363 ILE n 1 364 VAL n 1 365 MET n 1 366 CYS n 1 367 GLY n 1 368 VAL n 1 369 ASP n 1 370 TYR n 1 371 GLU n 1 372 VAL n 1 373 ALA n 1 374 ASP n 1 375 TRP n 1 376 SER n 1 377 TRP n 1 378 HIS n 1 379 ASP n 1 380 GLY n 1 381 ALA n 1 382 ILE n 1 383 LEU n 1 384 PRO n 1 385 PHE n 1 386 ASP n 1 387 ILE n 1 388 ASP n 1 389 LYS n 1 390 MET n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Influenza A virus' _entity_src_nat.pdbx_ncbi_taxonomy_id 385580 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain 'A/DUCK/UKRAINE/1/1963 H3N8' _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NRAM_I63A3 _struct_ref.pdbx_db_accession Q07599 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TYMNNTEAICDAKGFAPFSKDNGIRIGSRGHIFVIREPFVSCSPIECRTFFLTQGSLLNDKHSNGTVKDRSPFRTLMSVE VGQSPNVYQARFEAVAWSATACHDGKKWMTVGVTGPDSKAVAVIHYGGVPTDVVNSWAGDILRTQESSCTCIQGDCYWVM TDGPANRQAQYRIYKANQGRIIGQTDISFNGGHIEECSCYPNDGKVECVCRDGWTGTNRPVLVISPDLSYRVGYLCAGIP SDTPRGEDTQFTGSCTSPMGNQGYGVKGFGFRQGTDVWMGRTISRTSRSGFEILRIKNGWTQTSKEQIRKQVVVDNLNWS GYSGSFTLPVELSGKDCLVPCFWVEMIRGKPEEKTIWTSSSSIVMCGVDYEVADWSWHDGAILPFDIDKM ; _struct_ref.pdbx_align_begin 81 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4D8S _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 390 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q07599 _struct_ref_seq.db_align_beg 81 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 470 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 83 _struct_ref_seq.pdbx_auth_seq_align_end 471 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4D8S _struct_ref_seq_dif.mon_id ASN _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 213 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q07599 _struct_ref_seq_dif.db_mon_id GLY _struct_ref_seq_dif.pdbx_seq_db_seq_num 293 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 294 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0HX L-saccharide . 'pentan-3-yl 2-acetamido-2,4-dideoxy-alpha-L-threo-hex-4-enopyranosiduronic acid' ? 'C13 H21 N O6' 287.309 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4D8S _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.19 _exptl_crystal.density_percent_sol 43.83 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 300 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_details '50% MPD, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 300K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 944' _diffrn_detector.pdbx_collection_date 2011-01-24 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 4D8S _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 45.0 _reflns.d_resolution_high 2.40 _reflns.number_obs 14629 _reflns.number_all 14629 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 4D8S _refine.ls_number_reflns_obs 14629 _refine.ls_number_reflns_all 14629 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.511 _refine.ls_d_res_high 2.398 _refine.ls_percent_reflns_obs 99.90 _refine.ls_R_factor_obs 0.1920 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1840 _refine.ls_R_factor_R_free 0.2358 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.26 _refine.ls_number_reflns_R_free 1501 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -9.4821 _refine.aniso_B[2][2] -9.4821 _refine.aniso_B[3][3] 18.9643 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.323 _refine.solvent_model_param_bsol 39.942 _refine.pdbx_solvent_vdw_probe_radii 0.90 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.61 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values TWIN_LSQ_F _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML . _refine.pdbx_overall_phase_error 30.74 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3010 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 21 _refine_hist.number_atoms_solvent 89 _refine_hist.number_atoms_total 3120 _refine_hist.d_res_high 2.398 _refine_hist.d_res_low 32.511 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.010 ? ? 3117 ? 'X-RAY DIFFRACTION' f_angle_d 1.187 ? ? 4221 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 14.234 ? ? 1114 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.068 ? ? 450 ? 'X-RAY DIFFRACTION' f_plane_restr 0.009 ? ? 548 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.3997 2.4770 1183 0.2987 89.00 0.3238 . . 141 . . . . 'X-RAY DIFFRACTION' . 2.4770 2.5653 1182 0.2970 90.00 0.3766 . . 129 . . . . 'X-RAY DIFFRACTION' . 2.5653 2.6678 1184 0.2667 90.00 0.3232 . . 129 . . . . 'X-RAY DIFFRACTION' . 2.6678 2.7889 1195 0.2450 90.00 0.2656 . . 128 . . . . 'X-RAY DIFFRACTION' . 2.7889 2.9355 1200 0.2257 90.00 0.2948 . . 134 . . . . 'X-RAY DIFFRACTION' . 2.9355 3.1187 1180 0.2195 90.00 0.2736 . . 129 . . . . 'X-RAY DIFFRACTION' . 3.1187 3.3584 1190 0.1901 90.00 0.2861 . . 129 . . . . 'X-RAY DIFFRACTION' . 3.3584 3.6942 1186 0.1652 89.00 0.2035 . . 150 . . . . 'X-RAY DIFFRACTION' . 3.6942 4.2241 1188 0.1421 89.00 0.2089 . . 142 . . . . 'X-RAY DIFFRACTION' . 4.2241 5.3041 1198 0.1302 89.00 0.1877 . . 146 . . . . 'X-RAY DIFFRACTION' . 5.3041 19.5023 1208 0.1784 89.00 0.2278 . . 144 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4D8S _struct.title 'Influenza NA in complex with antiviral compound' _struct.pdbx_descriptor 'Neuraminidase (E.C.3.2.1.18)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4D8S _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'Hydrolase, Neuraminidase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 22 ? SER A 28 ? ASN A 104 SER A 110 1 ? 7 HELX_P HELX_P2 2 ASP A 60 ? ASN A 64 ? ASP A 142 ASN A 146 5 ? 5 HELX_P HELX_P3 3 ASN A 86 ? ALA A 90 ? ASN A 168 ALA A 171 5 ? 5 HELX_P HELX_P4 4 PRO A 329 A GLY A 334 ? PRO A 412 GLY A 414 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 10 SG ? ? ? 1_555 A CYS 337 SG ? ? A CYS 92 A CYS 417 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf2 disulf ? ? A CYS 42 SG ? ? ? 1_555 A CYS 47 SG ? ? A CYS 124 A CYS 129 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? A CYS 102 SG ? ? ? 1_555 A CYS 149 SG ? ? A CYS 183 A CYS 230 1_555 ? ? ? ? ? ? ? 2.026 ? ? disulf4 disulf ? ? A CYS 151 SG ? ? ? 1_555 A CYS 156 SG ? ? A CYS 232 A CYS 237 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf5 disulf ? ? A CYS 197 SG ? ? ? 1_555 A CYS 210 SG ? ? A CYS 278 A CYS 291 1_555 ? ? ? ? ? ? ? 2.055 ? ? disulf6 disulf ? ? A CYS 199 SG ? ? ? 1_555 A CYS 208 SG ? ? A CYS 280 A CYS 289 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf7 disulf ? ? A CYS 236 SG ? ? ? 1_555 A CYS 255 SG ? ? A CYS 318 A CYS 337 1_555 ? ? ? ? ? ? ? 2.066 ? ? disulf8 disulf ? ? A CYS 341 SG ? ? ? 1_555 A CYS 366 SG ? ? A CYS 421 A CYS 447 1_555 ? ? ? ? ? ? ? 2.028 ? ? metalc1 metalc ? ? A ASP 212 O ? ? ? 1_555 B CA . CA ? ? A ASP 293 A CA 501 1_555 ? ? ? ? ? ? ? 2.248 ? ? metalc2 metalc ? ? A GLY 216 O ? ? ? 1_555 B CA . CA ? ? A GLY 297 A CA 501 1_555 ? ? ? ? ? ? ? 2.458 ? ? metalc3 metalc ? ? A ASP 242 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 324 A CA 501 1_555 ? ? ? ? ? ? ? 2.551 ? ? metalc4 metalc ? ? A TYR 264 O ? ? ? 1_555 B CA . CA ? ? A TYR 347 A CA 501 1_555 ? ? ? ? ? ? ? 2.225 ? ? metalc5 metalc ? ? B CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 501 A HOH 620 1_555 ? ? ? ? ? ? ? 2.491 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 243 A . ? THR 325 A PRO 244 A ? PRO 326 A 1 -1.50 2 LYS 350 A . ? LYS 430 A PRO 351 A ? PRO 431 A 1 5.43 3 LEU 383 A . ? LEU 464 A PRO 384 A ? PRO 465 A 1 0.01 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 14 ? LYS A 20 ? GLY A 96 LYS A 102 A 2 THR A 358 ? VAL A 368 ? THR A 439 VAL A 449 A 3 VAL A 339 ? GLY A 349 ? VAL A 419 GLY A 429 A 4 SER A 323 ? LEU A 328 ? SER A 407 LEU A 412 B 1 PHE A 33 ? CYS A 42 ? PHE A 115 CYS A 124 B 2 CYS A 47 ? LEU A 57 ? CYS A 129 LEU A 139 B 3 THR A 75 ? GLU A 80 ? THR A 157 GLU A 162 B 4 ARG A 91 ? VAL A 95 ? ARG A 172 VAL A 176 C 1 SER A 98 ? HIS A 103 ? SER A 179 HIS A 184 C 2 TRP A 108 ? THR A 114 ? TRP A 189 THR A 195 C 3 VAL A 121 ? TYR A 126 ? VAL A 202 TYR A 207 C 4 VAL A 129 ? ASN A 135 ? VAL A 210 ASN A 216 D 1 THR A 150 ? ILE A 152 ? THR A 231 ILE A 233 D 2 ASP A 155 ? ASP A 162 ? ASP A 236 ASP A 243 D 3 GLN A 170 ? ASN A 177 ? GLN A 251 ASN A 258 D 4 ARG A 180 ? ILE A 187 ? ARG A 261 ILE A 268 E 1 GLU A 195 ? ASN A 202 ? GLU A 276 ASN A 283 E 2 LYS A 205 ? ARG A 211 ? LYS A 286 ARG A 292 E 3 PRO A 220 ? ILE A 224 ? PRO A 301 ILE A 305 E 4 TYR A 230 ? TYR A 234 ? TYR A 312 TYR A 316 F 1 GLY A 270 ? GLN A 273 ? GLY A 353 GLN A 356 F 2 ASP A 276 ? ARG A 281 ? ASP A 359 ARG A 364 F 3 SER A 289 ? ILE A 296 ? SER A 372 ILE A 379 F 4 GLN A 307 ? TRP A 319 ? GLN A 390 TRP A 403 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 18 ? N PHE A 100 O VAL A 364 ? O VAL A 445 A 2 3 O SER A 361 ? O SER A 442 N MET A 346 ? N MET A 426 A 3 4 O CYS A 341 ? O CYS A 421 N PHE A 326 ? N PHE A 410 B 1 2 N PHE A 39 ? N PHE A 121 O PHE A 50 ? O PHE A 132 B 2 3 N THR A 49 ? N THR A 131 O VAL A 79 ? O VAL A 161 B 3 4 N LEU A 76 ? N LEU A 158 O ALA A 94 ? O ALA A 175 C 1 2 N THR A 100 ? N THR A 181 O VAL A 111 ? O VAL A 192 C 2 3 N THR A 110 ? N THR A 191 O HIS A 125 ? O HIS A 206 C 3 4 N ALA A 122 ? N ALA A 203 O VAL A 134 ? O VAL A 215 D 1 2 N THR A 150 ? N THR A 231 O TYR A 157 ? O TYR A 238 D 2 3 N ASP A 162 ? N ASP A 243 O GLN A 170 ? O GLN A 251 D 3 4 N ILE A 173 ? N ILE A 254 O THR A 185 ? O THR A 266 E 1 2 N ASN A 202 ? N ASN A 283 O LYS A 205 ? O LYS A 286 E 2 3 N CYS A 210 ? N CYS A 291 O PRO A 220 ? O PRO A 301 E 3 4 N VAL A 221 ? N VAL A 302 O GLY A 233 ? O GLY A 315 F 1 2 N PHE A 271 ? N PHE A 354 O TRP A 278 ? O TRP A 361 F 2 3 N MET A 279 ? N MET A 362 O LEU A 294 ? O LEU A 377 F 3 4 N ARG A 295 ? N ARG A 378 O ARG A 309 ? O ARG A 392 # _database_PDB_matrix.entry_id 4D8S _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4D8S _atom_sites.fract_transf_matrix[1][1] 0.011187 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011187 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010554 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 83 83 THR THR A . n A 1 2 TYR 2 84 84 TYR TYR A . n A 1 3 MET 3 85 85 MET MET A . n A 1 4 ASN 4 86 86 ASN ASN A . n A 1 5 ASN 5 87 87 ASN ASN A . n A 1 6 THR 6 88 88 THR THR A . n A 1 7 GLU 7 89 89 GLU GLU A . n A 1 8 ALA 8 90 90 ALA ALA A . n A 1 9 ILE 9 91 91 ILE ILE A . n A 1 10 CYS 10 92 92 CYS CYS A . n A 1 11 ASP 11 93 93 ASP ASP A . n A 1 12 ALA 12 94 94 ALA ALA A . n A 1 13 LYS 13 95 95 LYS LYS A . n A 1 14 GLY 14 96 96 GLY GLY A . n A 1 15 PHE 15 97 97 PHE PHE A . n A 1 16 ALA 16 98 98 ALA ALA A . n A 1 17 PRO 17 99 99 PRO PRO A . n A 1 18 PHE 18 100 100 PHE PHE A . n A 1 19 SER 19 101 101 SER SER A . n A 1 20 LYS 20 102 102 LYS LYS A . n A 1 21 ASP 21 103 103 ASP ASP A . n A 1 22 ASN 22 104 104 ASN ASN A . n A 1 23 GLY 23 105 105 GLY GLY A . n A 1 24 ILE 24 106 106 ILE ILE A . n A 1 25 ARG 25 107 107 ARG ARG A . n A 1 26 ILE 26 108 108 ILE ILE A . n A 1 27 GLY 27 109 109 GLY GLY A . n A 1 28 SER 28 110 110 SER SER A . n A 1 29 ARG 29 111 111 ARG ARG A . n A 1 30 GLY 30 112 112 GLY GLY A . n A 1 31 HIS 31 113 113 HIS HIS A . n A 1 32 ILE 32 114 114 ILE ILE A . n A 1 33 PHE 33 115 115 PHE PHE A . n A 1 34 VAL 34 116 116 VAL VAL A . n A 1 35 ILE 35 117 117 ILE ILE A . n A 1 36 ARG 36 118 118 ARG ARG A . n A 1 37 GLU 37 119 119 GLU GLU A . n A 1 38 PRO 38 120 120 PRO PRO A . n A 1 39 PHE 39 121 121 PHE PHE A . n A 1 40 VAL 40 122 122 VAL VAL A . n A 1 41 SER 41 123 123 SER SER A . n A 1 42 CYS 42 124 124 CYS CYS A . n A 1 43 SER 43 125 125 SER SER A . n A 1 44 PRO 44 126 126 PRO PRO A . n A 1 45 ILE 45 127 127 ILE ILE A . n A 1 46 GLU 46 128 128 GLU GLU A . n A 1 47 CYS 47 129 129 CYS CYS A . n A 1 48 ARG 48 130 130 ARG ARG A . n A 1 49 THR 49 131 131 THR THR A . n A 1 50 PHE 50 132 132 PHE PHE A . n A 1 51 PHE 51 133 133 PHE PHE A . n A 1 52 LEU 52 134 134 LEU LEU A . n A 1 53 THR 53 135 135 THR THR A . n A 1 54 GLN 54 136 136 GLN GLN A . n A 1 55 GLY 55 137 137 GLY GLY A . n A 1 56 SER 56 138 138 SER SER A . n A 1 57 LEU 57 139 139 LEU LEU A . n A 1 58 LEU 58 140 140 LEU LEU A . n A 1 59 ASN 59 141 141 ASN ASN A . n A 1 60 ASP 60 142 142 ASP ASP A . n A 1 61 LYS 61 143 143 LYS LYS A . n A 1 62 HIS 62 144 144 HIS HIS A . n A 1 63 SER 63 145 145 SER SER A . n A 1 64 ASN 64 146 146 ASN ASN A . n A 1 65 GLY 65 147 147 GLY GLY A . n A 1 66 THR 66 148 148 THR THR A . n A 1 67 VAL 67 149 149 VAL VAL A . n A 1 68 LYS 68 150 150 LYS LYS A . n A 1 69 ASP 69 151 151 ASP ASP A . n A 1 70 ARG 70 152 152 ARG ARG A . n A 1 71 SER 71 153 153 SER SER A . n A 1 72 PRO 72 154 154 PRO PRO A . n A 1 73 PHE 73 155 155 PHE PHE A . n A 1 74 ARG 74 156 156 ARG ARG A . n A 1 75 THR 75 157 157 THR THR A . n A 1 76 LEU 76 158 158 LEU LEU A . n A 1 77 MET 77 159 159 MET MET A . n A 1 78 SER 78 160 160 SER SER A . n A 1 79 VAL 79 161 161 VAL VAL A . n A 1 80 GLU 80 162 162 GLU GLU A . n A 1 81 VAL 81 163 163 VAL VAL A . n A 1 82 GLY 82 164 164 GLY GLY A . n A 1 83 GLN 83 165 165 GLN GLN A . n A 1 84 SER 84 166 166 SER SER A . n A 1 85 PRO 85 167 167 PRO PRO A . n A 1 86 ASN 86 168 168 ASN ASN A . n A 1 87 VAL 87 169 169 VAL VAL A . n A 1 88 TYR 88 169 169 TYR TYR A A n A 1 89 GLN 89 170 170 GLN GLN A . n A 1 90 ALA 90 171 171 ALA ALA A . n A 1 91 ARG 91 172 172 ARG ARG A . n A 1 92 PHE 92 173 173 PHE PHE A . n A 1 93 GLU 93 174 174 GLU GLU A . n A 1 94 ALA 94 175 175 ALA ALA A . n A 1 95 VAL 95 176 176 VAL VAL A . n A 1 96 ALA 96 177 177 ALA ALA A . n A 1 97 TRP 97 178 178 TRP TRP A . n A 1 98 SER 98 179 179 SER SER A . n A 1 99 ALA 99 180 180 ALA ALA A . n A 1 100 THR 100 181 181 THR THR A . n A 1 101 ALA 101 182 182 ALA ALA A . n A 1 102 CYS 102 183 183 CYS CYS A . n A 1 103 HIS 103 184 184 HIS HIS A . n A 1 104 ASP 104 185 185 ASP ASP A . n A 1 105 GLY 105 186 186 GLY GLY A . n A 1 106 LYS 106 187 187 LYS LYS A . n A 1 107 LYS 107 188 188 LYS LYS A . n A 1 108 TRP 108 189 189 TRP TRP A . n A 1 109 MET 109 190 190 MET MET A . n A 1 110 THR 110 191 191 THR THR A . n A 1 111 VAL 111 192 192 VAL VAL A . n A 1 112 GLY 112 193 193 GLY GLY A . n A 1 113 VAL 113 194 194 VAL VAL A . n A 1 114 THR 114 195 195 THR THR A . n A 1 115 GLY 115 196 196 GLY GLY A . n A 1 116 PRO 116 197 197 PRO PRO A . n A 1 117 ASP 117 198 198 ASP ASP A . n A 1 118 SER 118 199 199 SER SER A . n A 1 119 LYS 119 200 200 LYS LYS A . n A 1 120 ALA 120 201 201 ALA ALA A . n A 1 121 VAL 121 202 202 VAL VAL A . n A 1 122 ALA 122 203 203 ALA ALA A . n A 1 123 VAL 123 204 204 VAL VAL A . n A 1 124 ILE 124 205 205 ILE ILE A . n A 1 125 HIS 125 206 206 HIS HIS A . n A 1 126 TYR 126 207 207 TYR TYR A . n A 1 127 GLY 127 208 208 GLY GLY A . n A 1 128 GLY 128 209 209 GLY GLY A . n A 1 129 VAL 129 210 210 VAL VAL A . n A 1 130 PRO 130 211 211 PRO PRO A . n A 1 131 THR 131 212 212 THR THR A . n A 1 132 ASP 132 213 213 ASP ASP A . n A 1 133 VAL 133 214 214 VAL VAL A . n A 1 134 VAL 134 215 215 VAL VAL A . n A 1 135 ASN 135 216 216 ASN ASN A . n A 1 136 SER 136 217 217 SER SER A . n A 1 137 TRP 137 218 218 TRP TRP A . n A 1 138 ALA 138 219 219 ALA ALA A . n A 1 139 GLY 139 220 220 GLY GLY A . n A 1 140 ASP 140 221 221 ASP ASP A . n A 1 141 ILE 141 222 222 ILE ILE A . n A 1 142 LEU 142 223 223 LEU LEU A . n A 1 143 ARG 143 224 224 ARG ARG A . n A 1 144 THR 144 225 225 THR THR A . n A 1 145 GLN 145 226 226 GLN GLN A . n A 1 146 GLU 146 227 227 GLU GLU A . n A 1 147 SER 147 228 228 SER SER A . n A 1 148 SER 148 229 229 SER SER A . n A 1 149 CYS 149 230 230 CYS CYS A . n A 1 150 THR 150 231 231 THR THR A . n A 1 151 CYS 151 232 232 CYS CYS A . n A 1 152 ILE 152 233 233 ILE ILE A . n A 1 153 GLN 153 234 234 GLN GLN A . n A 1 154 GLY 154 235 235 GLY GLY A . n A 1 155 ASP 155 236 236 ASP ASP A . n A 1 156 CYS 156 237 237 CYS CYS A . n A 1 157 TYR 157 238 238 TYR TYR A . n A 1 158 TRP 158 239 239 TRP TRP A . n A 1 159 VAL 159 240 240 VAL VAL A . n A 1 160 MET 160 241 241 MET MET A . n A 1 161 THR 161 242 242 THR THR A . n A 1 162 ASP 162 243 243 ASP ASP A . n A 1 163 GLY 163 244 244 GLY GLY A . n A 1 164 PRO 164 245 245 PRO PRO A . n A 1 165 ALA 165 246 246 ALA ALA A . n A 1 166 ASN 166 247 247 ASN ASN A . n A 1 167 ARG 167 248 248 ARG ARG A . n A 1 168 GLN 168 249 249 GLN GLN A . n A 1 169 ALA 169 250 250 ALA ALA A . n A 1 170 GLN 170 251 251 GLN GLN A . n A 1 171 TYR 171 252 252 TYR TYR A . n A 1 172 ARG 172 253 253 ARG ARG A . n A 1 173 ILE 173 254 254 ILE ILE A . n A 1 174 TYR 174 255 255 TYR TYR A . n A 1 175 LYS 175 256 256 LYS LYS A . n A 1 176 ALA 176 257 257 ALA ALA A . n A 1 177 ASN 177 258 258 ASN ASN A . n A 1 178 GLN 178 259 259 GLN GLN A . n A 1 179 GLY 179 260 260 GLY GLY A . n A 1 180 ARG 180 261 261 ARG ARG A . n A 1 181 ILE 181 262 262 ILE ILE A . n A 1 182 ILE 182 263 263 ILE ILE A . n A 1 183 GLY 183 264 264 GLY GLY A . n A 1 184 GLN 184 265 265 GLN GLN A . n A 1 185 THR 185 266 266 THR THR A . n A 1 186 ASP 186 267 267 ASP ASP A . n A 1 187 ILE 187 268 268 ILE ILE A . n A 1 188 SER 188 269 269 SER SER A . n A 1 189 PHE 189 270 270 PHE PHE A . n A 1 190 ASN 190 271 271 ASN ASN A . n A 1 191 GLY 191 272 272 GLY GLY A . n A 1 192 GLY 192 273 273 GLY GLY A . n A 1 193 HIS 193 274 274 HIS HIS A . n A 1 194 ILE 194 275 275 ILE ILE A . n A 1 195 GLU 195 276 276 GLU GLU A . n A 1 196 GLU 196 277 277 GLU GLU A . n A 1 197 CYS 197 278 278 CYS CYS A . n A 1 198 SER 198 279 279 SER SER A . n A 1 199 CYS 199 280 280 CYS CYS A . n A 1 200 TYR 200 281 281 TYR TYR A . n A 1 201 PRO 201 282 282 PRO PRO A . n A 1 202 ASN 202 283 283 ASN ASN A . n A 1 203 ASP 203 284 284 ASP ASP A . n A 1 204 GLY 204 285 285 GLY GLY A . n A 1 205 LYS 205 286 286 LYS LYS A . n A 1 206 VAL 206 287 287 VAL VAL A . n A 1 207 GLU 207 288 288 GLU GLU A . n A 1 208 CYS 208 289 289 CYS CYS A . n A 1 209 VAL 209 290 290 VAL VAL A . n A 1 210 CYS 210 291 291 CYS CYS A . n A 1 211 ARG 211 292 292 ARG ARG A . n A 1 212 ASP 212 293 293 ASP ASP A . n A 1 213 ASN 213 294 294 ASN ASN A . n A 1 214 TRP 214 295 295 TRP TRP A . n A 1 215 THR 215 296 296 THR THR A . n A 1 216 GLY 216 297 297 GLY GLY A . n A 1 217 THR 217 298 298 THR THR A . n A 1 218 ASN 218 299 299 ASN ASN A . n A 1 219 ARG 219 300 300 ARG ARG A . n A 1 220 PRO 220 301 301 PRO PRO A . n A 1 221 VAL 221 302 302 VAL VAL A . n A 1 222 LEU 222 303 303 LEU LEU A . n A 1 223 VAL 223 304 304 VAL VAL A . n A 1 224 ILE 224 305 305 ILE ILE A . n A 1 225 SER 225 306 306 SER SER A . n A 1 226 PRO 226 308 308 PRO PRO A . n A 1 227 ASP 227 309 309 ASP ASP A . n A 1 228 LEU 228 310 310 LEU LEU A . n A 1 229 SER 229 311 311 SER SER A . n A 1 230 TYR 230 312 312 TYR TYR A . n A 1 231 ARG 231 313 313 ARG ARG A . n A 1 232 VAL 232 314 314 VAL VAL A . n A 1 233 GLY 233 315 315 GLY GLY A . n A 1 234 TYR 234 316 316 TYR TYR A . n A 1 235 LEU 235 317 317 LEU LEU A . n A 1 236 CYS 236 318 318 CYS CYS A . n A 1 237 ALA 237 319 319 ALA ALA A . n A 1 238 GLY 238 320 320 GLY GLY A . n A 1 239 ILE 239 321 321 ILE ILE A . n A 1 240 PRO 240 322 322 PRO PRO A . n A 1 241 SER 241 323 323 SER SER A . n A 1 242 ASP 242 324 324 ASP ASP A . n A 1 243 THR 243 325 325 THR THR A . n A 1 244 PRO 244 326 326 PRO PRO A . n A 1 245 ARG 245 327 327 ARG ARG A . n A 1 246 GLY 246 328 328 GLY GLY A . n A 1 247 GLU 247 329 329 GLU GLU A . n A 1 248 ASP 248 330 330 ASP ASP A . n A 1 249 THR 249 330 330 THR THR A A n A 1 250 GLN 250 330 330 GLN GLN A B n A 1 251 PHE 251 332 332 PHE PHE A . n A 1 252 THR 252 333 333 THR THR A . n A 1 253 GLY 253 335 335 GLY GLY A . n A 1 254 SER 254 336 336 SER SER A . n A 1 255 CYS 255 337 337 CYS CYS A . n A 1 256 THR 256 338 338 THR THR A . n A 1 257 SER 257 339 339 SER SER A . n A 1 258 PRO 258 340 340 PRO PRO A . n A 1 259 MET 259 341 341 MET MET A . n A 1 260 GLY 260 342 342 GLY GLY A . n A 1 261 ASN 261 344 344 ASN ASN A . n A 1 262 GLN 262 345 345 GLN GLN A . n A 1 263 GLY 263 346 346 GLY GLY A . n A 1 264 TYR 264 347 347 TYR TYR A . n A 1 265 GLY 265 348 348 GLY GLY A . n A 1 266 VAL 266 349 349 VAL VAL A . n A 1 267 LYS 267 350 350 LYS LYS A . n A 1 268 GLY 268 351 351 GLY GLY A . n A 1 269 PHE 269 352 352 PHE PHE A . n A 1 270 GLY 270 353 353 GLY GLY A . n A 1 271 PHE 271 354 354 PHE PHE A . n A 1 272 ARG 272 355 355 ARG ARG A . n A 1 273 GLN 273 356 356 GLN GLN A . n A 1 274 GLY 274 357 357 GLY GLY A . n A 1 275 THR 275 358 358 THR THR A . n A 1 276 ASP 276 359 359 ASP ASP A . n A 1 277 VAL 277 360 360 VAL VAL A . n A 1 278 TRP 278 361 361 TRP TRP A . n A 1 279 MET 279 362 362 MET MET A . n A 1 280 GLY 280 363 363 GLY GLY A . n A 1 281 ARG 281 364 364 ARG ARG A . n A 1 282 THR 282 365 365 THR THR A . n A 1 283 ILE 283 366 366 ILE ILE A . n A 1 284 SER 284 367 367 SER SER A . n A 1 285 ARG 285 368 368 ARG ARG A . n A 1 286 THR 286 369 369 THR THR A . n A 1 287 SER 287 370 370 SER SER A . n A 1 288 ARG 288 371 371 ARG ARG A . n A 1 289 SER 289 372 372 SER SER A . n A 1 290 GLY 290 373 373 GLY GLY A . n A 1 291 PHE 291 374 374 PHE PHE A . n A 1 292 GLU 292 375 375 GLU GLU A . n A 1 293 ILE 293 376 376 ILE ILE A . n A 1 294 LEU 294 377 377 LEU LEU A . n A 1 295 ARG 295 378 378 ARG ARG A . n A 1 296 ILE 296 379 379 ILE ILE A . n A 1 297 LYS 297 380 380 LYS LYS A . n A 1 298 ASN 298 381 381 ASN ASN A . n A 1 299 GLY 299 382 382 GLY GLY A . n A 1 300 TRP 300 383 383 TRP TRP A . n A 1 301 THR 301 384 384 THR THR A . n A 1 302 GLN 302 385 385 GLN GLN A . n A 1 303 THR 303 386 386 THR THR A . n A 1 304 SER 304 387 387 SER SER A . n A 1 305 LYS 305 388 388 LYS LYS A . n A 1 306 GLU 306 389 389 GLU GLU A . n A 1 307 GLN 307 390 390 GLN GLN A . n A 1 308 ILE 308 391 391 ILE ILE A . n A 1 309 ARG 309 392 392 ARG ARG A . n A 1 310 LYS 310 394 394 LYS LYS A . n A 1 311 GLN 311 395 395 GLN GLN A . n A 1 312 VAL 312 396 396 VAL VAL A . n A 1 313 VAL 313 397 397 VAL VAL A . n A 1 314 VAL 314 398 398 VAL VAL A . n A 1 315 ASP 315 399 399 ASP ASP A . n A 1 316 ASN 316 400 400 ASN ASN A . n A 1 317 LEU 317 401 401 LEU LEU A . n A 1 318 ASN 318 402 402 ASN ASN A . n A 1 319 TRP 319 403 403 TRP TRP A . n A 1 320 SER 320 404 404 SER SER A . n A 1 321 GLY 321 405 405 GLY GLY A . n A 1 322 TYR 322 406 406 TYR TYR A . n A 1 323 SER 323 407 407 SER SER A . n A 1 324 GLY 324 408 408 GLY GLY A . n A 1 325 SER 325 409 409 SER SER A . n A 1 326 PHE 326 410 410 PHE PHE A . n A 1 327 THR 327 411 411 THR THR A . n A 1 328 LEU 328 412 412 LEU LEU A . n A 1 329 PRO 329 412 412 PRO PRO A A n A 1 330 VAL 330 412 412 VAL VAL A B n A 1 331 GLU 331 412 412 GLU GLU A C n A 1 332 LEU 332 412 412 LEU LEU A D n A 1 333 SER 333 413 413 SER SER A . n A 1 334 GLY 334 414 414 GLY GLY A . n A 1 335 LYS 335 415 415 LYS LYS A . n A 1 336 ASP 336 416 416 ASP ASP A . n A 1 337 CYS 337 417 417 CYS CYS A . n A 1 338 LEU 338 418 418 LEU LEU A . n A 1 339 VAL 339 419 419 VAL VAL A . n A 1 340 PRO 340 420 420 PRO PRO A . n A 1 341 CYS 341 421 421 CYS CYS A . n A 1 342 PHE 342 422 422 PHE PHE A . n A 1 343 TRP 343 423 423 TRP TRP A . n A 1 344 VAL 344 424 424 VAL VAL A . n A 1 345 GLU 345 425 425 GLU GLU A . n A 1 346 MET 346 426 426 MET MET A . n A 1 347 ILE 347 427 427 ILE ILE A . n A 1 348 ARG 348 428 428 ARG ARG A . n A 1 349 GLY 349 429 429 GLY GLY A . n A 1 350 LYS 350 430 430 LYS LYS A . n A 1 351 PRO 351 431 431 PRO PRO A . n A 1 352 GLU 352 432 432 GLU GLU A . n A 1 353 GLU 353 433 433 GLU GLU A . n A 1 354 LYS 354 435 435 LYS LYS A . n A 1 355 THR 355 436 436 THR THR A . n A 1 356 ILE 356 437 437 ILE ILE A . n A 1 357 TRP 357 438 438 TRP TRP A . n A 1 358 THR 358 439 439 THR THR A . n A 1 359 SER 359 440 440 SER SER A . n A 1 360 SER 360 441 441 SER SER A . n A 1 361 SER 361 442 442 SER SER A . n A 1 362 SER 362 443 443 SER SER A . n A 1 363 ILE 363 444 444 ILE ILE A . n A 1 364 VAL 364 445 445 VAL VAL A . n A 1 365 MET 365 446 446 MET MET A . n A 1 366 CYS 366 447 447 CYS CYS A . n A 1 367 GLY 367 448 448 GLY GLY A . n A 1 368 VAL 368 449 449 VAL VAL A . n A 1 369 ASP 369 450 450 ASP ASP A . n A 1 370 TYR 370 451 451 TYR TYR A . n A 1 371 GLU 371 452 452 GLU GLU A . n A 1 372 VAL 372 453 453 VAL VAL A . n A 1 373 ALA 373 454 454 ALA ALA A . n A 1 374 ASP 374 455 455 ASP ASP A . n A 1 375 TRP 375 456 456 TRP TRP A . n A 1 376 SER 376 457 457 SER SER A . n A 1 377 TRP 377 458 458 TRP TRP A . n A 1 378 HIS 378 459 459 HIS HIS A . n A 1 379 ASP 379 460 460 ASP ASP A . n A 1 380 GLY 380 461 461 GLY GLY A . n A 1 381 ALA 381 462 462 ALA ALA A . n A 1 382 ILE 382 463 463 ILE ILE A . n A 1 383 LEU 383 464 464 LEU LEU A . n A 1 384 PRO 384 465 465 PRO PRO A . n A 1 385 PHE 385 466 466 PHE PHE A . n A 1 386 ASP 386 467 467 ASP ASP A . n A 1 387 ILE 387 468 468 ILE ILE A . n A 1 388 ASP 388 469 469 ASP ASP A . n A 1 389 LYS 389 470 ? ? ? A . n A 1 390 MET 390 471 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 501 1 CA CA A . C 3 0HX 1 502 1 0HX DRG A . D 4 HOH 1 601 1 HOH HOH A . D 4 HOH 2 602 3 HOH HOH A . D 4 HOH 3 603 4 HOH HOH A . D 4 HOH 4 604 5 HOH HOH A . D 4 HOH 5 605 6 HOH HOH A . D 4 HOH 6 606 7 HOH HOH A . D 4 HOH 7 607 8 HOH HOH A . D 4 HOH 8 608 9 HOH HOH A . D 4 HOH 9 609 10 HOH HOH A . D 4 HOH 10 610 11 HOH HOH A . D 4 HOH 11 611 12 HOH HOH A . D 4 HOH 12 612 13 HOH HOH A . D 4 HOH 13 613 15 HOH HOH A . D 4 HOH 14 614 16 HOH HOH A . D 4 HOH 15 615 17 HOH HOH A . D 4 HOH 16 616 18 HOH HOH A . D 4 HOH 17 617 19 HOH HOH A . D 4 HOH 18 618 21 HOH HOH A . D 4 HOH 19 619 22 HOH HOH A . D 4 HOH 20 620 23 HOH HOH A . D 4 HOH 21 621 24 HOH HOH A . D 4 HOH 22 622 25 HOH HOH A . D 4 HOH 23 623 26 HOH HOH A . D 4 HOH 24 624 27 HOH HOH A . D 4 HOH 25 625 29 HOH HOH A . D 4 HOH 26 626 30 HOH HOH A . D 4 HOH 27 627 31 HOH HOH A . D 4 HOH 28 628 32 HOH HOH A . D 4 HOH 29 629 33 HOH HOH A . D 4 HOH 30 630 34 HOH HOH A . D 4 HOH 31 631 35 HOH HOH A . D 4 HOH 32 632 36 HOH HOH A . D 4 HOH 33 633 39 HOH HOH A . D 4 HOH 34 634 41 HOH HOH A . D 4 HOH 35 635 43 HOH HOH A . D 4 HOH 36 636 44 HOH HOH A . D 4 HOH 37 637 45 HOH HOH A . D 4 HOH 38 638 46 HOH HOH A . D 4 HOH 39 639 47 HOH HOH A . D 4 HOH 40 640 48 HOH HOH A . D 4 HOH 41 641 49 HOH HOH A . D 4 HOH 42 642 51 HOH HOH A . D 4 HOH 43 643 53 HOH HOH A . D 4 HOH 44 644 54 HOH HOH A . D 4 HOH 45 645 55 HOH HOH A . D 4 HOH 46 646 56 HOH HOH A . D 4 HOH 47 647 57 HOH HOH A . D 4 HOH 48 648 59 HOH HOH A . D 4 HOH 49 649 61 HOH HOH A . D 4 HOH 50 650 62 HOH HOH A . D 4 HOH 51 651 63 HOH HOH A . D 4 HOH 52 652 64 HOH HOH A . D 4 HOH 53 653 65 HOH HOH A . D 4 HOH 54 654 67 HOH HOH A . D 4 HOH 55 655 68 HOH HOH A . D 4 HOH 56 656 72 HOH HOH A . D 4 HOH 57 657 73 HOH HOH A . D 4 HOH 58 658 74 HOH HOH A . D 4 HOH 59 659 82 HOH HOH A . D 4 HOH 60 660 83 HOH HOH A . D 4 HOH 61 661 85 HOH HOH A . D 4 HOH 62 662 86 HOH HOH A . D 4 HOH 63 663 88 HOH HOH A . D 4 HOH 64 664 89 HOH HOH A . D 4 HOH 65 665 91 HOH HOH A . D 4 HOH 66 666 92 HOH HOH A . D 4 HOH 67 667 93 HOH HOH A . D 4 HOH 68 668 94 HOH HOH A . D 4 HOH 69 669 95 HOH HOH A . D 4 HOH 70 670 105 HOH HOH A . D 4 HOH 71 671 107 HOH HOH A . D 4 HOH 72 672 109 HOH HOH A . D 4 HOH 73 673 110 HOH HOH A . D 4 HOH 74 674 111 HOH HOH A . D 4 HOH 75 675 112 HOH HOH A . D 4 HOH 76 676 113 HOH HOH A . D 4 HOH 77 677 118 HOH HOH A . D 4 HOH 78 678 120 HOH HOH A . D 4 HOH 79 679 122 HOH HOH A . D 4 HOH 80 680 124 HOH HOH A . D 4 HOH 81 681 126 HOH HOH A . D 4 HOH 82 682 134 HOH HOH A . D 4 HOH 83 683 135 HOH HOH A . D 4 HOH 84 684 136 HOH HOH A . D 4 HOH 85 685 139 HOH HOH A . D 4 HOH 86 686 141 HOH HOH A . D 4 HOH 87 687 143 HOH HOH A . D 4 HOH 88 688 146 HOH HOH A . D 4 HOH 89 689 148 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 13730 ? 1 MORE -124 ? 1 'SSA (A^2)' 43950 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -y,x,z 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_555 y,-x,z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 601 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ASP 212 ? A ASP 293 ? 1_555 CA ? B CA . ? A CA 501 ? 1_555 O ? A GLY 216 ? A GLY 297 ? 1_555 85.4 ? 2 O ? A ASP 212 ? A ASP 293 ? 1_555 CA ? B CA . ? A CA 501 ? 1_555 OD1 ? A ASP 242 ? A ASP 324 ? 1_555 89.4 ? 3 O ? A GLY 216 ? A GLY 297 ? 1_555 CA ? B CA . ? A CA 501 ? 1_555 OD1 ? A ASP 242 ? A ASP 324 ? 1_555 82.0 ? 4 O ? A ASP 212 ? A ASP 293 ? 1_555 CA ? B CA . ? A CA 501 ? 1_555 O ? A TYR 264 ? A TYR 347 ? 1_555 95.0 ? 5 O ? A GLY 216 ? A GLY 297 ? 1_555 CA ? B CA . ? A CA 501 ? 1_555 O ? A TYR 264 ? A TYR 347 ? 1_555 159.5 ? 6 OD1 ? A ASP 242 ? A ASP 324 ? 1_555 CA ? B CA . ? A CA 501 ? 1_555 O ? A TYR 264 ? A TYR 347 ? 1_555 118.5 ? 7 O ? A ASP 212 ? A ASP 293 ? 1_555 CA ? B CA . ? A CA 501 ? 1_555 O ? D HOH . ? A HOH 620 ? 1_555 165.0 ? 8 O ? A GLY 216 ? A GLY 297 ? 1_555 CA ? B CA . ? A CA 501 ? 1_555 O ? D HOH . ? A HOH 620 ? 1_555 105.1 ? 9 OD1 ? A ASP 242 ? A ASP 324 ? 1_555 CA ? B CA . ? A CA 501 ? 1_555 O ? D HOH . ? A HOH 620 ? 1_555 102.5 ? 10 O ? A TYR 264 ? A TYR 347 ? 1_555 CA ? B CA . ? A CA 501 ? 1_555 O ? D HOH . ? A HOH 620 ? 1_555 71.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-02-13 2 'Structure model' 2 0 2020-04-22 3 'Structure model' 2 1 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Database references' 4 2 'Structure model' 'Structure summary' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' chem_comp 3 2 'Structure model' entity 4 2 'Structure model' struct_ref_seq_dif 5 3 'Structure model' chem_comp 6 3 'Structure model' entity 7 3 'Structure model' pdbx_entity_nonpoly 8 3 'Structure model' pdbx_struct_conn_angle 9 3 'Structure model' struct_conn 10 3 'Structure model' struct_site 11 3 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.auth_atom_id' 2 2 'Structure model' '_atom_site.label_atom_id' 3 2 'Structure model' '_chem_comp.type' 4 2 'Structure model' '_entity.src_method' 5 2 'Structure model' '_struct_ref_seq_dif.details' 6 3 'Structure model' '_chem_comp.name' 7 3 'Structure model' '_entity.pdbx_description' 8 3 'Structure model' '_pdbx_entity_nonpoly.name' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.value' 22 3 'Structure model' '_struct_conn.pdbx_dist_value' 23 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 30 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 33 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7_650)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD1 A ASP 293 ? ? OH A TYR 316 ? ? 2.09 2 1 OG1 A THR 325 ? ? O A HOH 610 ? ? 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 148 ? ? -74.22 27.81 2 1 ALA A 177 ? ? -170.91 139.35 3 1 LYS A 187 ? ? -122.05 -51.86 4 1 ARG A 248 ? ? -176.19 -169.11 5 1 GLU A 277 ? ? 38.93 74.92 6 1 TRP A 295 ? ? -99.97 -73.68 7 1 TYR A 347 ? ? 75.08 -169.20 8 1 GLN A 356 ? ? -141.03 44.76 9 1 ARG A 364 ? ? 179.18 159.16 10 1 GLU A 375 ? ? -170.18 145.32 11 1 ASN A 400 ? ? -65.78 0.27 12 1 SER A 404 ? ? -120.31 -143.73 13 1 PRO A 412 A ? -52.29 176.28 14 1 LEU A 412 D ? -131.36 -57.55 15 1 LYS A 415 ? ? -49.46 168.17 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 118 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.145 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 470 ? A LYS 389 2 1 Y 1 A MET 471 ? A MET 390 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 'pentan-3-yl 2-acetamido-2,4-dideoxy-alpha-L-threo-hex-4-enopyranosiduronic acid' 0HX 4 water HOH #