HEADER LYASE 11-JAN-12 4D9B TITLE PYRIDOXAMINE 5' PHOSPHATE (PMP) BOUND FORM OF SALMONELLA TYPHIMURIUM TITLE 2 D-CYSTEINE DESULFHYDRASE OBTAINED AFTER CO-CRYSTALLIZATION WITH D- TITLE 3 CYCLOSERINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: D-CYSTEINE DESULFHYDRASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 4.4.1.15; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM; SOURCE 3 ORGANISM_TAXID: 90371; SOURCE 4 GENE: DCYD, STM1953; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)ROSETTA; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PRSET C KEYWDS FOLD TYPE II PLP-DEPENDENT ENZYME OR TRYPTOPHAN SYNTHASE BETA SUBUNIT KEYWDS 2 LIKE FAMILY, PLP DEPENDENT ENZYME, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR S.R.BHARATH,B.SHVETA,K.H.RAJESH,H.S.SAVITHRI,M.R.N.MURTHY REVDAT 2 08-NOV-23 4D9B 1 REMARK SEQADV REVDAT 1 30-MAY-12 4D9B 0 JRNL AUTH S.R.BHARATH,S.BISHT,R.K.HARIJAN,H.S.SAVITHRI,M.R.N.MURTHY JRNL TITL STRUCTURAL AND MUTATIONAL STUDIES ON SUBSTRATE SPECIFICITY JRNL TITL 2 AND CATALYSIS OF SALMONELLA TYPHIMURIUM D-CYSTEINE JRNL TITL 3 DESULFHYDRASE. JRNL REF PLOS ONE V. 7 36267 2012 JRNL REFN ESSN 1932-6203 JRNL PMID 22574144 JRNL DOI 10.1371/JOURNAL.PONE.0036267 REMARK 2 REMARK 2 RESOLUTION. 1.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 136354 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7191 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.67 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.72 REMARK 3 REFLECTION IN BIN (WORKING SET) : 9765 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2510 REMARK 3 BIN FREE R VALUE SET COUNT : 522 REMARK 3 BIN FREE R VALUE : 0.2860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9685 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 115 REMARK 3 SOLVENT ATOMS : 887 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.100 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.099 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.068 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.037 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 10088 ; 0.028 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 13763 ; 2.231 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1328 ; 6.516 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 391 ;38.046 ;24.552 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1567 ;13.644 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 47 ;21.094 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1620 ; 0.171 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7614 ; 0.013 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 6534 ; 1.399 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 10455 ; 2.183 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3554 ; 3.376 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3297 ; 5.132 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4D9B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000070044. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-APR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : SI(III) MONOCHROMATOR REMARK 200 OPTICS : BENT COLLIMATING MIRROR AND REMARK 200 TORROID REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 143652 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.670 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 33.9400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.27100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.680 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4D8T REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5M AMMONIUM SULPHATE, 15% (V/V) REMARK 280 ETHYLENE GLYCOL, 0.1M HEPES, 0.2% BENZAMIDINE, 10MM D- REMARK 280 CYCLOSERINE, PH 8.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 82.46300 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -13 REMARK 465 ARG A -12 REMARK 465 GLY A -11 REMARK 465 SER A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 GLY A -3 REMARK 465 MET A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 MET B -13 REMARK 465 ARG B -12 REMARK 465 GLY B -11 REMARK 465 SER B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 GLY B -3 REMARK 465 MET B -2 REMARK 465 ALA B -1 REMARK 465 SER B 0 REMARK 465 MET C -13 REMARK 465 ARG C -12 REMARK 465 GLY C -11 REMARK 465 SER C -10 REMARK 465 HIS C -9 REMARK 465 HIS C -8 REMARK 465 HIS C -7 REMARK 465 HIS C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 GLY C -3 REMARK 465 MET C -2 REMARK 465 ALA C -1 REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 465 PRO C 2 REMARK 465 LEU C 3 REMARK 465 HIS C 4 REMARK 465 HIS C 5 REMARK 465 LEU C 6 REMARK 465 MET D -13 REMARK 465 ARG D -12 REMARK 465 GLY D -11 REMARK 465 SER D -10 REMARK 465 HIS D -9 REMARK 465 HIS D -8 REMARK 465 HIS D -7 REMARK 465 HIS D -6 REMARK 465 HIS D -5 REMARK 465 HIS D -4 REMARK 465 GLY D -3 REMARK 465 MET D -2 REMARK 465 ALA D -1 REMARK 465 SER D 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 ARG A 8 CZ NH1 NH2 REMARK 470 ARG A 64 CD NE CZ NH1 NH2 REMARK 470 GLU A 181 CD OE1 OE2 REMARK 470 GLU A 182 CG CD OE1 OE2 REMARK 470 MET B 1 CG SD CE REMARK 470 HIS B 4 CG ND1 CD2 CE1 NE2 REMARK 470 ARG B 8 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 13 CG CD OE1 OE2 REMARK 470 ARG B 64 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 181 O CG CD OE1 OE2 REMARK 470 GLU B 182 CD OE1 OE2 REMARK 470 ARG C 8 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 145 CZ NH1 NH2 REMARK 470 GLU C 181 CD OE1 OE2 REMARK 470 GLU C 182 CG CD OE1 OE2 REMARK 470 MET D 1 CG SD CE REMARK 470 ARG D 8 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 64 CZ NH1 NH2 REMARK 470 ARG D 152 NE CZ NH1 NH2 REMARK 470 GLU D 182 CD OE1 OE2 REMARK 470 GLU D 270 CD OE1 OE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 MET D 269 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 187 CB SER A 187 OG -0.080 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 26 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG B 26 NE - CZ - NH2 ANGL. DEV. = -4.8 DEGREES REMARK 500 ARG B 222 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG C 26 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG C 26 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 LEU D 6 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 46 60.61 38.41 REMARK 500 MET A 47 0.65 81.30 REMARK 500 ASN A 113 -167.27 -105.64 REMARK 500 ALA A 196 4.16 90.33 REMARK 500 SER A 221 -16.01 -148.09 REMARK 500 TYR A 287 -70.80 -118.95 REMARK 500 ASP A 306 -151.97 -148.81 REMARK 500 ASN B 113 -165.71 -101.49 REMARK 500 SER B 161 50.70 -93.66 REMARK 500 VAL B 184 109.49 -57.17 REMARK 500 ALA B 196 -6.58 87.93 REMARK 500 SER B 221 -17.09 -150.87 REMARK 500 TYR B 287 -74.93 -113.95 REMARK 500 ALA C 46 63.07 32.95 REMARK 500 SER C 161 47.41 -94.83 REMARK 500 GLU C 182 13.36 49.82 REMARK 500 ALA C 196 1.10 91.53 REMARK 500 SER C 221 -14.20 -147.08 REMARK 500 TYR C 287 -70.84 -121.44 REMARK 500 ASP C 306 -157.25 -150.84 REMARK 500 ASN D 113 -163.89 -101.22 REMARK 500 ALA D 196 -6.69 92.86 REMARK 500 SER D 221 -14.24 -142.83 REMARK 500 LEU D 283 -164.88 -100.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PMP A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PMP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PMP C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO C 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN D 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PMP D 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO D 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4D8T RELATED DB: PDB REMARK 900 SALMONELLA TYPHIMURIUM D-CYSTEINE DESULFHYDRASE AT 2.2A REMARK 900 RELATED ID: 4D8U RELATED DB: PDB REMARK 900 SALMONELLA TYPHIMURIUM D-CYSTEINE DESULFHYDRASE AT 3.3 A WITH 8 REMARK 900 PROTOMERS IN THE ASYMMETRIC UNIT REMARK 900 RELATED ID: 4D8W RELATED DB: PDB REMARK 900 SALMONELLA TYPHIMURIUM D-CYSTEINE DESULFHYDRASE SOAKED WITH D-CYS REMARK 900 REVEALED PYRUVATE BOUND AT 4 A AWAY FROM THE ACTIVE SITE REMARK 900 RELATED ID: 4D92 RELATED DB: PDB REMARK 900 SALMONELLA TYPHIMURIUM D-CYSTEINE DESULFHYDRASE SOAKED WITH BETA- REMARK 900 CHLORO-D-ALANINE REVEALED PYRUVATE BOUND AT 4 A AWAY FROM THE REMARK 900 ACTIVE SITE REMARK 900 RELATED ID: 4D96 RELATED DB: PDB REMARK 900 SALMONELLA TYPHIMURIUM D-CYSTEINE DESULFHYDRASE COMPLEXED WITH REMARK 900 AMINO CARBOXY CYCLOPROPANE (ACC) REMARK 900 RELATED ID: 4D97 RELATED DB: PDB REMARK 900 SALMONELLA TYPHIMURIUM D-CYSTEINE DESULFHYDRASE COMPLEXED WITH D- REMARK 900 SERINE; D-SERINE IS BOUND NON-COVALENTLY AT THE ACTIVE SITE REMARK 900 RELATED ID: 4D99 RELATED DB: PDB REMARK 900 RELATED ID: 4D9C RELATED DB: PDB REMARK 900 RELATED ID: 4D9E RELATED DB: PDB REMARK 900 RELATED ID: 4D9F RELATED DB: PDB DBREF 4D9B A 1 328 UNP Q8ZNT7 DCYD_SALTY 1 328 DBREF 4D9B B 1 328 UNP Q8ZNT7 DCYD_SALTY 1 328 DBREF 4D9B C 1 328 UNP Q8ZNT7 DCYD_SALTY 1 328 DBREF 4D9B D 1 328 UNP Q8ZNT7 DCYD_SALTY 1 328 SEQADV 4D9B MET A -13 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B ARG A -12 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B GLY A -11 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B SER A -10 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS A -9 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS A -8 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS A -7 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS A -6 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS A -5 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS A -4 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B GLY A -3 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B MET A -2 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B ALA A -1 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B SER A 0 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B MET B -13 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B ARG B -12 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B GLY B -11 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B SER B -10 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS B -9 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS B -8 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS B -7 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS B -6 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS B -5 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS B -4 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B GLY B -3 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B MET B -2 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B ALA B -1 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B SER B 0 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B MET C -13 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B ARG C -12 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B GLY C -11 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B SER C -10 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS C -9 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS C -8 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS C -7 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS C -6 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS C -5 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS C -4 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B GLY C -3 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B MET C -2 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B ALA C -1 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B SER C 0 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B MET D -13 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B ARG D -12 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B GLY D -11 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B SER D -10 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS D -9 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS D -8 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS D -7 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS D -6 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS D -5 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B HIS D -4 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B GLY D -3 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B MET D -2 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B ALA D -1 UNP Q8ZNT7 EXPRESSION TAG SEQADV 4D9B SER D 0 UNP Q8ZNT7 EXPRESSION TAG SEQRES 1 A 342 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 A 342 SER MET PRO LEU HIS HIS LEU THR ARG PHE PRO ARG LEU SEQRES 3 A 342 GLU PHE ILE GLY ALA PRO THR PRO LEU GLU TYR LEU PRO SEQRES 4 A 342 ARG LEU SER ASP TYR LEU GLY ARG GLU ILE TYR ILE LYS SEQRES 5 A 342 ARG ASP ASP VAL THR PRO ILE ALA MET GLY GLY ASN LYS SEQRES 6 A 342 LEU ARG LYS LEU GLU PHE LEU VAL ALA ASP ALA LEU ARG SEQRES 7 A 342 GLU GLY ALA ASP THR LEU ILE THR ALA GLY ALA ILE GLN SEQRES 8 A 342 SER ASN HIS VAL ARG GLN THR ALA ALA VAL ALA ALA LYS SEQRES 9 A 342 LEU GLY LEU HIS CYS VAL ALA LEU LEU GLU ASN PRO ILE SEQRES 10 A 342 GLY THR THR ALA GLU ASN TYR LEU THR ASN GLY ASN ARG SEQRES 11 A 342 LEU LEU LEU ASP LEU PHE ASN THR GLN ILE GLU MET CYS SEQRES 12 A 342 ASP ALA LEU THR ASP PRO ASP ALA GLN LEU GLN THR LEU SEQRES 13 A 342 ALA THR ARG ILE GLU ALA GLN GLY PHE ARG PRO TYR VAL SEQRES 14 A 342 ILE PRO VAL GLY GLY SER SER ALA LEU GLY ALA MET GLY SEQRES 15 A 342 TYR VAL GLU SER ALA LEU GLU ILE ALA GLN GLN CYS GLU SEQRES 16 A 342 GLU VAL VAL GLY LEU SER SER VAL VAL VAL ALA SER GLY SEQRES 17 A 342 SER ALA GLY THR HIS ALA GLY LEU ALA VAL GLY LEU GLU SEQRES 18 A 342 HIS LEU MET PRO ASP VAL GLU LEU ILE GLY VAL THR VAL SEQRES 19 A 342 SER ARG SER VAL ALA GLU GLN LYS PRO LYS VAL ILE ALA SEQRES 20 A 342 LEU GLN GLN ALA ILE ALA GLY GLN LEU ALA LEU THR ALA SEQRES 21 A 342 THR ALA ASP ILE HIS LEU TRP ASP ASP TYR PHE ALA PRO SEQRES 22 A 342 GLY TYR GLY VAL PRO ASN ASP ALA GLY MET GLU ALA VAL SEQRES 23 A 342 LYS LEU LEU ALA SER LEU GLU GLY VAL LEU LEU ASP PRO SEQRES 24 A 342 VAL TYR THR GLY LYS ALA MET ALA GLY LEU ILE ASP GLY SEQRES 25 A 342 ILE SER GLN LYS ARG PHE ASN ASP ASP GLY PRO ILE LEU SEQRES 26 A 342 PHE ILE HIS THR GLY GLY ALA PRO ALA LEU PHE ALA TYR SEQRES 27 A 342 HIS PRO HIS VAL SEQRES 1 B 342 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 B 342 SER MET PRO LEU HIS HIS LEU THR ARG PHE PRO ARG LEU SEQRES 3 B 342 GLU PHE ILE GLY ALA PRO THR PRO LEU GLU TYR LEU PRO SEQRES 4 B 342 ARG LEU SER ASP TYR LEU GLY ARG GLU ILE TYR ILE LYS SEQRES 5 B 342 ARG ASP ASP VAL THR PRO ILE ALA MET GLY GLY ASN LYS SEQRES 6 B 342 LEU ARG LYS LEU GLU PHE LEU VAL ALA ASP ALA LEU ARG SEQRES 7 B 342 GLU GLY ALA ASP THR LEU ILE THR ALA GLY ALA ILE GLN SEQRES 8 B 342 SER ASN HIS VAL ARG GLN THR ALA ALA VAL ALA ALA LYS SEQRES 9 B 342 LEU GLY LEU HIS CYS VAL ALA LEU LEU GLU ASN PRO ILE SEQRES 10 B 342 GLY THR THR ALA GLU ASN TYR LEU THR ASN GLY ASN ARG SEQRES 11 B 342 LEU LEU LEU ASP LEU PHE ASN THR GLN ILE GLU MET CYS SEQRES 12 B 342 ASP ALA LEU THR ASP PRO ASP ALA GLN LEU GLN THR LEU SEQRES 13 B 342 ALA THR ARG ILE GLU ALA GLN GLY PHE ARG PRO TYR VAL SEQRES 14 B 342 ILE PRO VAL GLY GLY SER SER ALA LEU GLY ALA MET GLY SEQRES 15 B 342 TYR VAL GLU SER ALA LEU GLU ILE ALA GLN GLN CYS GLU SEQRES 16 B 342 GLU VAL VAL GLY LEU SER SER VAL VAL VAL ALA SER GLY SEQRES 17 B 342 SER ALA GLY THR HIS ALA GLY LEU ALA VAL GLY LEU GLU SEQRES 18 B 342 HIS LEU MET PRO ASP VAL GLU LEU ILE GLY VAL THR VAL SEQRES 19 B 342 SER ARG SER VAL ALA GLU GLN LYS PRO LYS VAL ILE ALA SEQRES 20 B 342 LEU GLN GLN ALA ILE ALA GLY GLN LEU ALA LEU THR ALA SEQRES 21 B 342 THR ALA ASP ILE HIS LEU TRP ASP ASP TYR PHE ALA PRO SEQRES 22 B 342 GLY TYR GLY VAL PRO ASN ASP ALA GLY MET GLU ALA VAL SEQRES 23 B 342 LYS LEU LEU ALA SER LEU GLU GLY VAL LEU LEU ASP PRO SEQRES 24 B 342 VAL TYR THR GLY LYS ALA MET ALA GLY LEU ILE ASP GLY SEQRES 25 B 342 ILE SER GLN LYS ARG PHE ASN ASP ASP GLY PRO ILE LEU SEQRES 26 B 342 PHE ILE HIS THR GLY GLY ALA PRO ALA LEU PHE ALA TYR SEQRES 27 B 342 HIS PRO HIS VAL SEQRES 1 C 342 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 C 342 SER MET PRO LEU HIS HIS LEU THR ARG PHE PRO ARG LEU SEQRES 3 C 342 GLU PHE ILE GLY ALA PRO THR PRO LEU GLU TYR LEU PRO SEQRES 4 C 342 ARG LEU SER ASP TYR LEU GLY ARG GLU ILE TYR ILE LYS SEQRES 5 C 342 ARG ASP ASP VAL THR PRO ILE ALA MET GLY GLY ASN LYS SEQRES 6 C 342 LEU ARG LYS LEU GLU PHE LEU VAL ALA ASP ALA LEU ARG SEQRES 7 C 342 GLU GLY ALA ASP THR LEU ILE THR ALA GLY ALA ILE GLN SEQRES 8 C 342 SER ASN HIS VAL ARG GLN THR ALA ALA VAL ALA ALA LYS SEQRES 9 C 342 LEU GLY LEU HIS CYS VAL ALA LEU LEU GLU ASN PRO ILE SEQRES 10 C 342 GLY THR THR ALA GLU ASN TYR LEU THR ASN GLY ASN ARG SEQRES 11 C 342 LEU LEU LEU ASP LEU PHE ASN THR GLN ILE GLU MET CYS SEQRES 12 C 342 ASP ALA LEU THR ASP PRO ASP ALA GLN LEU GLN THR LEU SEQRES 13 C 342 ALA THR ARG ILE GLU ALA GLN GLY PHE ARG PRO TYR VAL SEQRES 14 C 342 ILE PRO VAL GLY GLY SER SER ALA LEU GLY ALA MET GLY SEQRES 15 C 342 TYR VAL GLU SER ALA LEU GLU ILE ALA GLN GLN CYS GLU SEQRES 16 C 342 GLU VAL VAL GLY LEU SER SER VAL VAL VAL ALA SER GLY SEQRES 17 C 342 SER ALA GLY THR HIS ALA GLY LEU ALA VAL GLY LEU GLU SEQRES 18 C 342 HIS LEU MET PRO ASP VAL GLU LEU ILE GLY VAL THR VAL SEQRES 19 C 342 SER ARG SER VAL ALA GLU GLN LYS PRO LYS VAL ILE ALA SEQRES 20 C 342 LEU GLN GLN ALA ILE ALA GLY GLN LEU ALA LEU THR ALA SEQRES 21 C 342 THR ALA ASP ILE HIS LEU TRP ASP ASP TYR PHE ALA PRO SEQRES 22 C 342 GLY TYR GLY VAL PRO ASN ASP ALA GLY MET GLU ALA VAL SEQRES 23 C 342 LYS LEU LEU ALA SER LEU GLU GLY VAL LEU LEU ASP PRO SEQRES 24 C 342 VAL TYR THR GLY LYS ALA MET ALA GLY LEU ILE ASP GLY SEQRES 25 C 342 ILE SER GLN LYS ARG PHE ASN ASP ASP GLY PRO ILE LEU SEQRES 26 C 342 PHE ILE HIS THR GLY GLY ALA PRO ALA LEU PHE ALA TYR SEQRES 27 C 342 HIS PRO HIS VAL SEQRES 1 D 342 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 D 342 SER MET PRO LEU HIS HIS LEU THR ARG PHE PRO ARG LEU SEQRES 3 D 342 GLU PHE ILE GLY ALA PRO THR PRO LEU GLU TYR LEU PRO SEQRES 4 D 342 ARG LEU SER ASP TYR LEU GLY ARG GLU ILE TYR ILE LYS SEQRES 5 D 342 ARG ASP ASP VAL THR PRO ILE ALA MET GLY GLY ASN LYS SEQRES 6 D 342 LEU ARG LYS LEU GLU PHE LEU VAL ALA ASP ALA LEU ARG SEQRES 7 D 342 GLU GLY ALA ASP THR LEU ILE THR ALA GLY ALA ILE GLN SEQRES 8 D 342 SER ASN HIS VAL ARG GLN THR ALA ALA VAL ALA ALA LYS SEQRES 9 D 342 LEU GLY LEU HIS CYS VAL ALA LEU LEU GLU ASN PRO ILE SEQRES 10 D 342 GLY THR THR ALA GLU ASN TYR LEU THR ASN GLY ASN ARG SEQRES 11 D 342 LEU LEU LEU ASP LEU PHE ASN THR GLN ILE GLU MET CYS SEQRES 12 D 342 ASP ALA LEU THR ASP PRO ASP ALA GLN LEU GLN THR LEU SEQRES 13 D 342 ALA THR ARG ILE GLU ALA GLN GLY PHE ARG PRO TYR VAL SEQRES 14 D 342 ILE PRO VAL GLY GLY SER SER ALA LEU GLY ALA MET GLY SEQRES 15 D 342 TYR VAL GLU SER ALA LEU GLU ILE ALA GLN GLN CYS GLU SEQRES 16 D 342 GLU VAL VAL GLY LEU SER SER VAL VAL VAL ALA SER GLY SEQRES 17 D 342 SER ALA GLY THR HIS ALA GLY LEU ALA VAL GLY LEU GLU SEQRES 18 D 342 HIS LEU MET PRO ASP VAL GLU LEU ILE GLY VAL THR VAL SEQRES 19 D 342 SER ARG SER VAL ALA GLU GLN LYS PRO LYS VAL ILE ALA SEQRES 20 D 342 LEU GLN GLN ALA ILE ALA GLY GLN LEU ALA LEU THR ALA SEQRES 21 D 342 THR ALA ASP ILE HIS LEU TRP ASP ASP TYR PHE ALA PRO SEQRES 22 D 342 GLY TYR GLY VAL PRO ASN ASP ALA GLY MET GLU ALA VAL SEQRES 23 D 342 LYS LEU LEU ALA SER LEU GLU GLY VAL LEU LEU ASP PRO SEQRES 24 D 342 VAL TYR THR GLY LYS ALA MET ALA GLY LEU ILE ASP GLY SEQRES 25 D 342 ILE SER GLN LYS ARG PHE ASN ASP ASP GLY PRO ILE LEU SEQRES 26 D 342 PHE ILE HIS THR GLY GLY ALA PRO ALA LEU PHE ALA TYR SEQRES 27 D 342 HIS PRO HIS VAL HET BEN A 401 9 HET PMP A 402 16 HET EDO A 403 4 HET EDO A 404 4 HET PMP B 401 16 HET EDO B 402 4 HET EDO B 403 4 HET BEN C 401 9 HET PMP C 402 16 HET EDO C 403 4 HET BEN D 401 9 HET PMP D 402 16 HET EDO D 403 4 HETNAM BEN BENZAMIDINE HETNAM PMP 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETSYN PMP PYRIDOXAMINE-5'-PHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 5 BEN 3(C7 H8 N2) FORMUL 6 PMP 4(C8 H13 N2 O5 P) FORMUL 7 EDO 6(C2 H6 O2) FORMUL 18 HOH *887(H2 O) HELIX 1 1 LEU A 3 PHE A 9 5 7 HELIX 2 2 LEU A 24 GLY A 32 1 9 HELIX 3 3 ASP A 41 THR A 43 5 3 HELIX 4 4 ASN A 50 GLU A 65 1 16 HELIX 5 5 SER A 78 GLY A 92 1 15 HELIX 6 6 ALA A 107 ASN A 113 1 7 HELIX 7 7 ASN A 113 PHE A 122 1 10 HELIX 8 8 ASP A 134 GLN A 149 1 16 HELIX 9 9 PRO A 157 SER A 161 5 5 HELIX 10 10 SER A 162 GLU A 181 1 20 HELIX 11 11 ALA A 196 MET A 210 1 15 HELIX 12 12 SER A 223 LEU A 242 1 20 HELIX 13 13 ASN A 265 GLY A 280 1 16 HELIX 14 14 TYR A 287 LYS A 302 1 16 HELIX 15 15 PRO A 319 HIS A 325 1 7 HELIX 16 16 LEU B 3 PHE B 9 5 7 HELIX 17 17 LEU B 24 GLY B 32 1 9 HELIX 18 18 ASP B 41 THR B 43 5 3 HELIX 19 19 ASN B 50 GLU B 65 1 16 HELIX 20 20 SER B 78 GLY B 92 1 15 HELIX 21 21 ALA B 107 ASN B 113 1 7 HELIX 22 22 ASN B 113 PHE B 122 1 10 HELIX 23 23 ASP B 134 ALA B 148 1 15 HELIX 24 24 PRO B 157 SER B 161 5 5 HELIX 25 25 SER B 162 CYS B 180 1 19 HELIX 26 26 ALA B 196 MET B 210 1 15 HELIX 27 27 SER B 223 LEU B 242 1 20 HELIX 28 28 ASN B 265 GLY B 280 1 16 HELIX 29 29 TYR B 287 GLN B 301 1 15 HELIX 30 30 GLY B 317 PRO B 319 5 3 HELIX 31 31 ALA B 320 HIS B 325 1 6 HELIX 32 32 LEU C 24 GLY C 32 1 9 HELIX 33 33 ASP C 41 THR C 43 5 3 HELIX 34 34 ASN C 50 GLU C 65 1 16 HELIX 35 35 SER C 78 GLY C 92 1 15 HELIX 36 36 ALA C 107 ASN C 113 1 7 HELIX 37 37 ASN C 113 PHE C 122 1 10 HELIX 38 38 ASP C 134 ALA C 148 1 15 HELIX 39 39 PRO C 157 SER C 161 5 5 HELIX 40 40 SER C 162 GLU C 181 1 20 HELIX 41 41 ALA C 196 MET C 210 1 15 HELIX 42 42 SER C 223 LEU C 242 1 20 HELIX 43 43 ASN C 265 GLY C 280 1 16 HELIX 44 44 TYR C 287 GLN C 301 1 15 HELIX 45 45 PRO C 319 HIS C 325 1 7 HELIX 46 46 LEU D 3 PHE D 9 5 7 HELIX 47 47 LEU D 24 GLY D 32 1 9 HELIX 48 48 ASP D 41 THR D 43 5 3 HELIX 49 49 ASN D 50 GLU D 65 1 16 HELIX 50 50 SER D 78 GLY D 92 1 15 HELIX 51 51 ALA D 107 ASN D 113 1 7 HELIX 52 52 ASN D 113 PHE D 122 1 10 HELIX 53 53 ASP D 134 GLN D 149 1 16 HELIX 54 54 PRO D 157 SER D 161 5 5 HELIX 55 55 SER D 162 CYS D 180 1 19 HELIX 56 56 GLU D 181 VAL D 183 5 3 HELIX 57 57 ALA D 196 MET D 210 1 15 HELIX 58 58 SER D 223 LEU D 242 1 20 HELIX 59 59 ASN D 265 GLY D 280 1 16 HELIX 60 60 TYR D 287 GLN D 301 1 15 HELIX 61 61 PRO D 319 HIS D 325 1 7 SHEET 1 A 6 LEU A 21 TYR A 23 0 SHEET 2 A 6 ILE A 35 ARG A 39 -1 O ILE A 37 N GLU A 22 SHEET 3 A 6 ILE A 310 HIS A 314 1 O PHE A 312 N TYR A 36 SHEET 4 A 6 SER A 188 SER A 193 1 N VAL A 190 O ILE A 313 SHEET 5 A 6 GLU A 214 THR A 219 1 O ILE A 216 N VAL A 189 SHEET 6 A 6 HIS A 251 TRP A 253 1 O HIS A 251 N GLY A 217 SHEET 1 B 4 GLN A 125 MET A 128 0 SHEET 2 B 4 HIS A 94 GLU A 100 1 N ALA A 97 O GLU A 127 SHEET 3 B 4 THR A 69 ALA A 75 1 N LEU A 70 O HIS A 94 SHEET 4 B 4 PRO A 153 VAL A 155 1 O TYR A 154 N THR A 69 SHEET 1 C 6 LEU B 21 TYR B 23 0 SHEET 2 C 6 ILE B 35 ARG B 39 -1 O ILE B 37 N GLU B 22 SHEET 3 C 6 ILE B 310 HIS B 314 1 O PHE B 312 N TYR B 36 SHEET 4 C 6 SER B 188 SER B 193 1 N VAL B 190 O LEU B 311 SHEET 5 C 6 GLU B 214 THR B 219 1 O ILE B 216 N VAL B 189 SHEET 6 C 6 HIS B 251 TRP B 253 1 O HIS B 251 N GLY B 217 SHEET 1 D 4 GLN B 125 MET B 128 0 SHEET 2 D 4 HIS B 94 GLU B 100 1 N CYS B 95 O GLN B 125 SHEET 3 D 4 THR B 69 ALA B 75 1 N THR B 72 O LEU B 98 SHEET 4 D 4 PRO B 153 VAL B 155 1 O TYR B 154 N ILE B 71 SHEET 1 E 6 LEU C 21 TYR C 23 0 SHEET 2 E 6 ILE C 35 ARG C 39 -1 O ILE C 37 N GLU C 22 SHEET 3 E 6 ILE C 310 HIS C 314 1 O PHE C 312 N TYR C 36 SHEET 4 E 6 SER C 188 SER C 193 1 N VAL C 190 O ILE C 313 SHEET 5 E 6 GLU C 214 THR C 219 1 O ILE C 216 N VAL C 189 SHEET 6 E 6 HIS C 251 TRP C 253 1 O TRP C 253 N GLY C 217 SHEET 1 F 4 GLN C 125 MET C 128 0 SHEET 2 F 4 HIS C 94 GLU C 100 1 N ALA C 97 O GLU C 127 SHEET 3 F 4 THR C 69 ALA C 75 1 N THR C 72 O LEU C 98 SHEET 4 F 4 PRO C 153 VAL C 155 1 O TYR C 154 N ILE C 71 SHEET 1 G 6 LEU D 21 TYR D 23 0 SHEET 2 G 6 ILE D 35 ARG D 39 -1 O ILE D 37 N GLU D 22 SHEET 3 G 6 ILE D 310 HIS D 314 1 O PHE D 312 N TYR D 36 SHEET 4 G 6 SER D 188 SER D 193 1 N VAL D 190 O ILE D 313 SHEET 5 G 6 GLU D 214 THR D 219 1 O ILE D 216 N VAL D 189 SHEET 6 G 6 HIS D 251 TRP D 253 1 O HIS D 251 N GLY D 217 SHEET 1 H 4 GLN D 125 MET D 128 0 SHEET 2 H 4 HIS D 94 GLU D 100 1 N ALA D 97 O GLU D 127 SHEET 3 H 4 THR D 69 ALA D 75 1 N THR D 72 O LEU D 98 SHEET 4 H 4 PRO D 153 VAL D 155 1 O TYR D 154 N ILE D 71 CISPEP 1 ALA A 258 PRO A 259 0 6.46 CISPEP 2 HIS A 325 PRO A 326 0 1.24 CISPEP 3 ALA B 258 PRO B 259 0 13.15 CISPEP 4 HIS B 325 PRO B 326 0 -1.63 CISPEP 5 ALA C 258 PRO C 259 0 9.15 CISPEP 6 HIS C 325 PRO C 326 0 -3.11 CISPEP 7 ALA D 258 PRO D 259 0 2.99 CISPEP 8 HIS D 325 PRO D 326 0 1.53 SITE 1 AC1 4 TYR A 30 LEU A 31 ILE A 296 HOH A 716 SITE 1 AC2 17 ASN A 50 LYS A 51 LYS A 54 ASN A 79 SITE 2 AC2 17 GLY A 194 SER A 195 ALA A 196 GLY A 197 SITE 3 AC2 17 THR A 198 TYR A 287 THR A 315 GLY A 316 SITE 4 AC2 17 GLY A 317 HOH A 508 HOH A 538 HOH A 702 SITE 5 AC2 17 HOH A 712 SITE 1 AC3 2 CYS A 129 ASP A 130 SITE 1 AC4 5 SER A 195 SER A 221 ARG A 222 HOH A 681 SITE 2 AC4 5 HOH A 733 SITE 1 AC5 18 ASN B 50 LYS B 51 LYS B 54 ASN B 79 SITE 2 AC5 18 GLY B 194 SER B 195 ALA B 196 GLY B 197 SITE 3 AC5 18 THR B 198 TYR B 287 THR B 315 GLY B 316 SITE 4 AC5 18 GLY B 317 HOH B 510 HOH B 518 HOH B 531 SITE 5 AC5 18 HOH B 656 HOH B 657 SITE 1 AC6 4 SER B 195 SER B 221 ARG B 222 HOH B 662 SITE 1 AC7 5 ASN B 265 ASP B 266 HOH B 598 HOH B 684 SITE 2 AC7 5 HIS D 94 SITE 1 AC8 5 TYR B 30 LEU B 31 TYR C 30 LEU C 31 SITE 2 AC8 5 SER C 300 SITE 1 AC9 18 ASN C 50 LYS C 51 LYS C 54 ASN C 79 SITE 2 AC9 18 GLY C 194 SER C 195 ALA C 196 GLY C 197 SITE 3 AC9 18 THR C 198 TYR C 287 THR C 315 GLY C 316 SITE 4 AC9 18 GLY C 317 HOH C 510 HOH C 521 HOH C 604 SITE 5 AC9 18 HOH C 624 HOH C 625 SITE 1 BC1 5 SER C 195 SER C 221 ARG C 222 HOH C 617 SITE 2 BC1 5 HOH C 630 SITE 1 BC2 3 TYR D 30 LEU D 31 ILE D 296 SITE 1 BC3 18 ASN D 50 LYS D 51 LYS D 54 ASN D 79 SITE 2 BC3 18 GLY D 194 SER D 195 ALA D 196 GLY D 197 SITE 3 BC3 18 THR D 198 TYR D 287 THR D 315 GLY D 316 SITE 4 BC3 18 GLY D 317 HOH D 512 HOH D 531 HOH D 645 SITE 5 BC3 18 HOH D 694 HOH D 695 SITE 1 BC4 3 SER D 195 SER D 221 ARG D 222 CRYST1 66.318 164.926 68.314 90.00 118.97 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015079 0.000000 0.008349 0.00000 SCALE2 0.000000 0.006063 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016732 0.00000