HEADER MEMBRANE PROTEIN 20-JAN-12 4DE9 TITLE LYTR-CPS2A-PSR FAMILY PROTEIN YWTF (TAGT) WITH BOUND OCTAPRENYL TITLE 2 PYROPHOSPHATE LIPID COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE TRANSCRIPTIONAL REGULATOR YWTF; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 98-481; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: YWTF, BSU35840; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET28A KEYWDS POSSIBLE ROLE IN WALL TECHOIC ACID SYNTHESIS, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.EBERHARDT,C.N.HOYLAND,D.VOLLMER,S.BISLE,R.M.CLEVERLEY,O.JOHNSBORG, AUTHOR 2 S.HAVARSTEIN,R.J.LEWIS,W.VOLLMER REVDAT 3 28-FEB-24 4DE9 1 REMARK SEQADV REVDAT 2 20-JUN-12 4DE9 1 JRNL REVDAT 1 04-APR-12 4DE9 0 JRNL AUTH A.EBERHARDT,C.N.HOYLAND,D.VOLLMER,S.BISLE,R.M.CLEVERLEY, JRNL AUTH 2 O.JOHNSBORG,L.S.HAVARSTEIN,R.J.LEWIS,W.VOLLMER JRNL TITL ATTACHMENT OF CAPSULAR POLYSACCHARIDE TO THE CELL WALL IN JRNL TITL 2 STREPTOCOCCUS PNEUMONIAE. JRNL REF MICROB DRUG RESIST V. 18 240 2012 JRNL REFN ESSN 1931-8448 JRNL PMID 22432711 JRNL DOI 10.1089/MDR.2011.0232 REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.130 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 29245 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1486 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.8755 - 3.9723 0.97 2685 133 0.1904 0.1805 REMARK 3 2 3.9723 - 3.1537 1.00 2574 153 0.1817 0.2053 REMARK 3 3 3.1537 - 2.7553 1.00 2547 138 0.1965 0.2377 REMARK 3 4 2.7553 - 2.5035 1.00 2525 136 0.1988 0.2322 REMARK 3 5 2.5035 - 2.3241 1.00 2506 146 0.1816 0.2338 REMARK 3 6 2.3241 - 2.1871 1.00 2467 135 0.1912 0.2430 REMARK 3 7 2.1871 - 2.0776 1.00 2510 143 0.1966 0.2259 REMARK 3 8 2.0776 - 1.9872 1.00 2481 137 0.2011 0.2422 REMARK 3 9 1.9872 - 1.9107 1.00 2487 122 0.2170 0.2506 REMARK 3 10 1.9107 - 1.8447 1.00 2491 123 0.2534 0.3199 REMARK 3 11 1.8447 - 1.7871 1.00 2486 120 0.2902 0.3375 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.86 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 46.84 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 1961 REMARK 3 ANGLE : 0.904 2634 REMARK 3 CHIRALITY : 0.048 300 REMARK 3 PLANARITY : 0.003 334 REMARK 3 DIHEDRAL : 14.891 748 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 51:95) REMARK 3 ORIGIN FOR THE GROUP (A): -25.9080 8.4614 -9.3227 REMARK 3 T TENSOR REMARK 3 T11: 0.1276 T22: 0.1843 REMARK 3 T33: 0.2228 T12: 0.0021 REMARK 3 T13: 0.0414 T23: 0.1009 REMARK 3 L TENSOR REMARK 3 L11: 5.6710 L22: 6.4029 REMARK 3 L33: 6.7551 L12: 0.8563 REMARK 3 L13: 2.1845 L23: 2.9703 REMARK 3 S TENSOR REMARK 3 S11: 0.0905 S12: -0.2724 S13: -0.1723 REMARK 3 S21: 0.1862 S22: -0.0036 S23: 0.7090 REMARK 3 S31: -0.0784 S32: -0.5900 S33: 0.0627 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 96:152) REMARK 3 ORIGIN FOR THE GROUP (A): -16.8573 15.7953 -8.7340 REMARK 3 T TENSOR REMARK 3 T11: 0.1399 T22: 0.1647 REMARK 3 T33: 0.1541 T12: 0.0127 REMARK 3 T13: -0.0024 T23: 0.0496 REMARK 3 L TENSOR REMARK 3 L11: 3.6874 L22: 2.2029 REMARK 3 L33: 2.1618 L12: -0.8569 REMARK 3 L13: 0.9896 L23: 0.1294 REMARK 3 S TENSOR REMARK 3 S11: -0.0707 S12: -0.0390 S13: 0.0187 REMARK 3 S21: 0.0992 S22: 0.0514 S23: 0.2630 REMARK 3 S31: -0.0987 S32: -0.0946 S33: 0.0085 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 153:243) REMARK 3 ORIGIN FOR THE GROUP (A): -6.3706 6.8145 5.8644 REMARK 3 T TENSOR REMARK 3 T11: 0.1533 T22: 0.1372 REMARK 3 T33: 0.1811 T12: 0.0148 REMARK 3 T13: 0.0054 T23: 0.0210 REMARK 3 L TENSOR REMARK 3 L11: 4.2041 L22: 0.6807 REMARK 3 L33: 3.8730 L12: -1.2055 REMARK 3 L13: 3.0189 L23: -0.8139 REMARK 3 S TENSOR REMARK 3 S11: -0.1579 S12: -0.3373 S13: 0.1618 REMARK 3 S21: 0.1014 S22: 0.1262 S23: 0.1122 REMARK 3 S31: -0.1696 S32: -0.2061 S33: 0.0450 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 244:305) REMARK 3 ORIGIN FOR THE GROUP (A): -13.3366 9.9521 -7.0380 REMARK 3 T TENSOR REMARK 3 T11: 0.1047 T22: 0.2217 REMARK 3 T33: 0.0587 T12: 0.0061 REMARK 3 T13: 0.0146 T23: 0.0150 REMARK 3 L TENSOR REMARK 3 L11: 3.3621 L22: 4.6622 REMARK 3 L33: 1.5403 L12: 0.8122 REMARK 3 L13: 0.9695 L23: -1.0858 REMARK 3 S TENSOR REMARK 3 S11: 0.1034 S12: -0.3431 S13: -0.2146 REMARK 3 S21: 0.1645 S22: -0.0406 S23: -0.0784 REMARK 3 S31: 0.0015 S32: -0.1624 S33: -0.0416 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 306:322) REMARK 3 ORIGIN FOR THE GROUP (A): -12.2720 10.7372 -20.7386 REMARK 3 T TENSOR REMARK 3 T11: 0.2289 T22: 0.3322 REMARK 3 T33: 0.3137 T12: 0.0107 REMARK 3 T13: 0.0010 T23: -0.0064 REMARK 3 L TENSOR REMARK 3 L11: 2.0761 L22: 2.1140 REMARK 3 L33: 8.4006 L12: 2.0690 REMARK 3 L13: 0.5158 L23: 1.1653 REMARK 3 S TENSOR REMARK 3 S11: -0.3102 S12: 0.7472 S13: -0.4864 REMARK 3 S21: -0.7539 S22: 0.4388 S23: -0.4114 REMARK 3 S31: 0.3111 S32: 0.2131 S33: -0.0209 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4DE9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000070219. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29369 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.787 REMARK 200 RESOLUTION RANGE LOW (A) : 47.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES 20% PEG 3350 0.2M MGCL2 , REMARK 280 PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.73000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 32.87000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 32.87000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.36500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 32.87000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 32.87000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 103.09500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 32.87000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 32.87000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 34.36500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 32.87000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.87000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 103.09500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 68.73000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 688 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 45 REMARK 465 ALA A 46 REMARK 465 SER A 47 REMARK 465 LYS A 48 REMARK 465 GLU A 49 REMARK 465 ALA A 50 REMARK 465 ALA A 83 REMARK 465 ARG A 84 REMARK 465 GLU A 85 REMARK 465 LYS A 86 REMARK 465 ASN A 87 REMARK 465 GLY A 88 REMARK 465 GLU A 89 REMARK 465 THR A 90 REMARK 465 VAL A 91 REMARK 465 ASP A 92 REMARK 465 LYS A 220 REMARK 465 ALA A 221 REMARK 465 ASP A 222 REMARK 465 SER A 223 REMARK 465 ASP A 224 REMARK 465 LEU A 245 REMARK 465 SER A 246 REMARK 465 SER A 247 REMARK 465 ILE A 248 REMARK 465 PRO A 249 REMARK 465 ALA A 250 REMARK 465 TYR A 251 REMARK 465 ASP A 252 REMARK 465 ASP A 253 REMARK 465 ILE A 254 REMARK 465 VAL A 255 REMARK 465 ASP A 256 REMARK 465 THR A 257 REMARK 465 MET A 258 REMARK 465 GLY A 259 REMARK 465 GLN A 260 REMARK 465 ASN A 261 REMARK 465 LEU A 323 REMARK 465 GLU A 324 REMARK 465 HIS A 325 REMARK 465 HIS A 326 REMARK 465 HIS A 327 REMARK 465 HIS A 328 REMARK 465 HIS A 329 REMARK 465 HIS A 330 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 219 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 297 59.59 -159.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VTP A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4DE8 RELATED DB: PDB DBREF 4DE9 A 46 322 UNP Q7WY78 YWTF_BACSU 46 322 SEQADV 4DE9 MET A 45 UNP Q7WY78 EXPRESSION TAG SEQADV 4DE9 LEU A 323 UNP Q7WY78 EXPRESSION TAG SEQADV 4DE9 GLU A 324 UNP Q7WY78 EXPRESSION TAG SEQADV 4DE9 HIS A 325 UNP Q7WY78 EXPRESSION TAG SEQADV 4DE9 HIS A 326 UNP Q7WY78 EXPRESSION TAG SEQADV 4DE9 HIS A 327 UNP Q7WY78 EXPRESSION TAG SEQADV 4DE9 HIS A 328 UNP Q7WY78 EXPRESSION TAG SEQADV 4DE9 HIS A 329 UNP Q7WY78 EXPRESSION TAG SEQADV 4DE9 HIS A 330 UNP Q7WY78 EXPRESSION TAG SEQRES 1 A 286 MET ALA SER LYS GLU ALA HIS VAL SER LEU ALA ARG GLY SEQRES 2 A 286 GLU GLN SER VAL LYS ARG ILE LYS GLU PHE ASP PRO GLY SEQRES 3 A 286 LYS ASP SER PHE SER VAL LEU LEU LEU GLY ILE ASP ALA SEQRES 4 A 286 ARG GLU LYS ASN GLY GLU THR VAL ASP GLN ALA ARG SER SEQRES 5 A 286 ASP ALA ASN VAL LEU VAL THR PHE ASN ARG LYS GLU LYS SEQRES 6 A 286 THR ALA LYS MET LEU SER ILE PRO ARG ASP ALA TYR VAL SEQRES 7 A 286 ASN ILE PRO GLY HIS GLY TYR ASP LYS PHE THR HIS ALA SEQRES 8 A 286 HIS ALA TYR GLY GLY VAL ASP LEU THR VAL LYS THR VAL SEQRES 9 A 286 GLU GLU MET LEU ASP ILE PRO VAL ASP TYR VAL VAL GLU SEQRES 10 A 286 SER ASN PHE THR ALA PHE GLU ASP VAL VAL ASN GLU LEU SEQRES 11 A 286 ASN GLY VAL LYS VAL THR VAL LYS SER ASP LYS VAL ILE SEQRES 12 A 286 GLN GLN ILE LYS LYS ASP THR LYS GLY LYS VAL VAL LEU SEQRES 13 A 286 GLN LYS GLY THR HIS THR LEU ASP GLY GLU GLU ALA LEU SEQRES 14 A 286 ALA TYR VAL ARG THR ARG LYS ALA ASP SER ASP LEU LEU SEQRES 15 A 286 ARG GLY GLN ARG GLN MET GLU VAL LEU SER ALA ILE ILE SEQRES 16 A 286 ASP LYS SER LYS SER LEU SER SER ILE PRO ALA TYR ASP SEQRES 17 A 286 ASP ILE VAL ASP THR MET GLY GLN ASN LEU LYS MET ASN SEQRES 18 A 286 LEU SER LEU LYS ASP ALA ILE GLY LEU PHE PRO PHE ILE SEQRES 19 A 286 THR SER LEU LYS SER VAL GLU SER ILE GLN LEU THR GLY SEQRES 20 A 286 TYR ASP TYR GLU PRO ALA GLY VAL TYR TYR PHE LYS LEU SEQRES 21 A 286 ASN GLN GLN LYS LEU GLN GLU VAL LYS LYS GLU LEU GLN SEQRES 22 A 286 ASN ASP LEU GLY VAL LEU GLU HIS HIS HIS HIS HIS HIS HET VTP A 401 49 HETNAM VTP (2Z,6Z,10Z,14Z,18Z,22E,26E)-3,7,11,15,19,23,27,31- HETNAM 2 VTP OCTAMETHYLDOTRIACONTA-2,6,10,14,18,22,26,30-OCTAEN-1- HETNAM 3 VTP YL TRIHYDROGEN DIPHOSPHATE FORMUL 2 VTP C40 H68 O7 P2 FORMUL 3 HOH *211(H2 O) HELIX 1 1 THR A 133 ASP A 153 1 21 HELIX 2 2 PHE A 164 LEU A 174 1 11 HELIX 3 3 SER A 183 THR A 194 1 12 HELIX 4 4 ASP A 208 THR A 218 1 11 HELIX 5 5 LEU A 226 SER A 244 1 19 HELIX 6 6 SER A 267 THR A 279 1 13 HELIX 7 7 ASN A 305 GLY A 321 1 17 SHEET 1 A 6 LYS A 263 MET A 264 0 SHEET 2 A 6 TYR A 158 ASN A 163 -1 N GLU A 161 O LYS A 263 SHEET 3 A 6 PHE A 74 ILE A 81 1 N LEU A 79 O VAL A 160 SHEET 4 A 6 SER A 96 ASN A 105 -1 O VAL A 100 N LEU A 78 SHEET 5 A 6 THR A 110 SER A 115 -1 O LEU A 114 N LEU A 101 SHEET 6 A 6 SER A 283 ILE A 287 1 O GLU A 285 N MET A 113 SHEET 1 B 2 TYR A 121 ILE A 124 0 SHEET 2 B 2 GLY A 128 LYS A 131 -1 O GLY A 128 N ILE A 124 SHEET 1 C 2 VAL A 177 VAL A 181 0 SHEET 2 C 2 GLY A 203 LEU A 207 -1 O LEU A 207 N VAL A 177 SHEET 1 D 2 GLY A 291 TYR A 294 0 SHEET 2 D 2 TYR A 301 LEU A 304 -1 O TYR A 301 N TYR A 294 SITE 1 AC1 14 ASP A 82 ASP A 97 PHE A 104 ASN A 163 SITE 2 AC1 14 PHE A 164 PHE A 167 VAL A 216 ARG A 217 SITE 3 AC1 14 ARG A 227 GLN A 231 LEU A 235 SER A 236 SITE 4 AC1 14 ILE A 239 ILE A 278 CRYST1 65.740 65.740 137.460 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015211 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015211 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007275 0.00000