data_4DGH # _entry.id 4DGH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4DGH RCSB RCSB070298 WWPDB D_1000070298 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3mgl . unspecified PDB 4DGF . unspecified TargetTrack APC36741.1 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4DGH _pdbx_database_status.recvd_initial_deposition_date 2012-01-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Keller, J.P.' 1 'Chang, C.' 2 'Marshall, N.' 3 'Bearden, J.' 4 'Dallos, P.' 5 'Joachimiak, A.' 6 'Midwest Center for Structural Genomics (MCSG)' 7 # _citation.id primary _citation.title 'Structure of SulP Transporter STAS Domain from Vibrio Cholerae Refined to 1.9 Angstrom Resolution' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Keller, J.P.' 1 primary 'Chang, C.' 2 primary 'Dallos, P.' 3 primary 'Joachimiak, A.' 4 # _cell.entry_id 4DGH _cell.length_a 90.850 _cell.length_b 90.850 _cell.length_c 65.180 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4DGH _symmetry.space_group_name_H-M 'P 4 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Sulfate permease family protein' 14596.197 2 ? ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 3 non-polymer syn 'IODIDE ION' 126.904 15 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 3 ? ? ? ? 5 water nat water 18.015 99 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNAE(MSE)SYELAQHGRSTLPRELAVYALEGPFFFAAAETFERV(MSE)GSIQETPQILILRLKWVPF(MSE)DITGIQ TLEE(MSE)IQSFHKRGIKVLISGANSRVSQKLVKAGIVKLVGEQNVYPVFEGALSAALTEIEAQP ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAEMSYELAQHGRSTLPRELAVYALEGPFFFAAAETFERVMGSIQETPQILILRLKWVPFMDITGIQTLEEMIQSFHKR GIKVLISGANSRVSQKLVKAGIVKLVGEQNVYPVFEGALSAALTEIEAQP ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier APC36741.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 GLU n 1 5 MSE n 1 6 SER n 1 7 TYR n 1 8 GLU n 1 9 LEU n 1 10 ALA n 1 11 GLN n 1 12 HIS n 1 13 GLY n 1 14 ARG n 1 15 SER n 1 16 THR n 1 17 LEU n 1 18 PRO n 1 19 ARG n 1 20 GLU n 1 21 LEU n 1 22 ALA n 1 23 VAL n 1 24 TYR n 1 25 ALA n 1 26 LEU n 1 27 GLU n 1 28 GLY n 1 29 PRO n 1 30 PHE n 1 31 PHE n 1 32 PHE n 1 33 ALA n 1 34 ALA n 1 35 ALA n 1 36 GLU n 1 37 THR n 1 38 PHE n 1 39 GLU n 1 40 ARG n 1 41 VAL n 1 42 MSE n 1 43 GLY n 1 44 SER n 1 45 ILE n 1 46 GLN n 1 47 GLU n 1 48 THR n 1 49 PRO n 1 50 GLN n 1 51 ILE n 1 52 LEU n 1 53 ILE n 1 54 LEU n 1 55 ARG n 1 56 LEU n 1 57 LYS n 1 58 TRP n 1 59 VAL n 1 60 PRO n 1 61 PHE n 1 62 MSE n 1 63 ASP n 1 64 ILE n 1 65 THR n 1 66 GLY n 1 67 ILE n 1 68 GLN n 1 69 THR n 1 70 LEU n 1 71 GLU n 1 72 GLU n 1 73 MSE n 1 74 ILE n 1 75 GLN n 1 76 SER n 1 77 PHE n 1 78 HIS n 1 79 LYS n 1 80 ARG n 1 81 GLY n 1 82 ILE n 1 83 LYS n 1 84 VAL n 1 85 LEU n 1 86 ILE n 1 87 SER n 1 88 GLY n 1 89 ALA n 1 90 ASN n 1 91 SER n 1 92 ARG n 1 93 VAL n 1 94 SER n 1 95 GLN n 1 96 LYS n 1 97 LEU n 1 98 VAL n 1 99 LYS n 1 100 ALA n 1 101 GLY n 1 102 ILE n 1 103 VAL n 1 104 LYS n 1 105 LEU n 1 106 VAL n 1 107 GLY n 1 108 GLU n 1 109 GLN n 1 110 ASN n 1 111 VAL n 1 112 TYR n 1 113 PRO n 1 114 VAL n 1 115 PHE n 1 116 GLU n 1 117 GLY n 1 118 ALA n 1 119 LEU n 1 120 SER n 1 121 ALA n 1 122 ALA n 1 123 LEU n 1 124 THR n 1 125 GLU n 1 126 ILE n 1 127 GLU n 1 128 ALA n 1 129 GLN n 1 130 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene VC_A0077 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vibrio cholerae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 666 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9KN88_VIBCH _struct_ref.pdbx_db_accession Q9KN88 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EMSYELAQHGRSTLPRELAVYALEGPFFFAAAETFERVMGSIQETPQILILRLKWVPFMDITGIQTLEEMIQSFHKRGIK VLISGANSRVSQKLVKAGIVKLVGEQNVYPVFEGALSAALTEIEAQP ; _struct_ref.pdbx_align_begin 425 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4DGH A 4 ? 130 ? Q9KN88 425 ? 551 ? 425 551 2 1 4DGH B 4 ? 130 ? Q9KN88 425 ? 551 ? 425 551 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4DGH SER A 1 ? UNP Q9KN88 ? ? 'EXPRESSION TAG' 422 1 1 4DGH ASN A 2 ? UNP Q9KN88 ? ? 'EXPRESSION TAG' 423 2 1 4DGH ALA A 3 ? UNP Q9KN88 ? ? 'EXPRESSION TAG' 424 3 2 4DGH SER B 1 ? UNP Q9KN88 ? ? 'EXPRESSION TAG' 422 4 2 4DGH ASN B 2 ? UNP Q9KN88 ? ? 'EXPRESSION TAG' 423 5 2 4DGH ALA B 3 ? UNP Q9KN88 ? ? 'EXPRESSION TAG' 424 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4DGH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_percent_sol 46.60 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pdbx_details '200 mM KI, 20% PEG 3350, pH 6, VAPOR DIFFUSION, SITTING DROP, temperature 292K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97937 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97937 # _reflns.entry_id 4DGH _reflns.observed_criterion_sigma_I -1000 _reflns.observed_criterion_sigma_F -1000 _reflns.d_resolution_low 65.18 _reflns.d_resolution_high 1.9 _reflns.number_obs 22098 _reflns.number_all 22098 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.9 _reflns_shell.d_res_low 2 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4DGH _refine.ls_number_reflns_obs 20943 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 65.18 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 99.93 _refine.ls_R_factor_obs 0.19822 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19629 _refine.ls_R_factor_R_free 0.23601 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1131 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.946 _refine.B_iso_mean 30.749 _refine.aniso_B[1][1] 0.03 _refine.aniso_B[2][2] 0.03 _refine.aniso_B[3][3] -0.06 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.165 _refine.pdbx_overall_ESU_R_Free 0.150 _refine.overall_SU_ML 0.087 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 6.965 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1989 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 99 _refine_hist.number_atoms_total 2122 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 65.18 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.019 0.019 ? 2191 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2.119 1.989 ? 2978 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.821 5.000 ? 288 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 36.493 23.830 ? 94 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 16.700 15.000 ? 374 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 16.554 15.000 ? 16 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.151 0.200 ? 341 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.010 0.021 ? 1646 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.900 _refine_ls_shell.d_res_low 1.949 _refine_ls_shell.number_reflns_R_work 1359 _refine_ls_shell.R_factor_R_work 0.282 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.311 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 80 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4DGH _struct.title 'Structure of SulP Transporter STAS Domain from Vibrio Cholerae Refined to 1.9 Angstrom Resolution' _struct.pdbx_descriptor 'Sulfate permease family protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DGH _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text ;STAS Domain, Anion Exchange, Membrane, TRANSPORT PROTEIN, Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 4 ? K N N 4 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 3 ? P N N 3 ? Q N N 3 ? R N N 3 ? S N N 3 ? T N N 3 ? U N N 4 ? V N N 5 ? W N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 2 ? HIS A 12 ? ASN A 423 HIS A 433 1 ? 11 HELX_P HELX_P2 2 PHE A 31 ? ILE A 45 ? PHE A 452 ILE A 466 1 ? 15 HELX_P HELX_P3 3 ASP A 63 ? LYS A 79 ? ASP A 484 LYS A 500 1 ? 17 HELX_P HELX_P4 4 ASN A 90 ? ALA A 100 ? ASN A 511 ALA A 521 1 ? 11 HELX_P HELX_P5 5 GLY A 101 ? GLY A 107 ? GLY A 522 GLY A 528 1 ? 7 HELX_P HELX_P6 6 VAL A 114 ? GLN A 129 ? VAL A 535 GLN A 550 1 ? 16 HELX_P HELX_P7 7 ALA B 3 ? HIS B 12 ? ALA B 424 HIS B 433 1 ? 10 HELX_P HELX_P8 8 PHE B 31 ? ILE B 45 ? PHE B 452 ILE B 466 1 ? 15 HELX_P HELX_P9 9 ASP B 63 ? ARG B 80 ? ASP B 484 ARG B 501 1 ? 18 HELX_P HELX_P10 10 ASN B 90 ? ALA B 100 ? ASN B 511 ALA B 521 1 ? 11 HELX_P HELX_P11 11 GLY B 101 ? GLY B 107 ? GLY B 522 GLY B 528 1 ? 7 HELX_P HELX_P12 12 VAL B 114 ? ALA B 128 ? VAL B 535 ALA B 549 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A GLU 4 C ? ? ? 1_555 A MSE 5 N ? ? A GLU 425 A MSE 426 1_555 ? ? ? ? ? ? ? 1.347 ? covale2 covale ? ? A MSE 5 C ? ? ? 1_555 A SER 6 N ? ? A MSE 426 A SER 427 1_555 ? ? ? ? ? ? ? 1.338 ? covale3 covale ? ? A VAL 41 C ? ? ? 1_555 A MSE 42 N ? ? A VAL 462 A MSE 463 1_555 ? ? ? ? ? ? ? 1.322 ? covale4 covale ? ? A MSE 42 C ? ? ? 1_555 A GLY 43 N ? ? A MSE 463 A GLY 464 1_555 ? ? ? ? ? ? ? 1.316 ? covale5 covale ? ? A PHE 61 C ? ? ? 1_555 A MSE 62 N ? ? A PHE 482 A MSE 483 1_555 ? ? ? ? ? ? ? 1.339 ? covale6 covale ? ? A MSE 62 C ? ? ? 1_555 A ASP 63 N ? ? A MSE 483 A ASP 484 1_555 ? ? ? ? ? ? ? 1.326 ? covale7 covale ? ? A GLU 72 C ? ? ? 1_555 A MSE 73 N A ? A GLU 493 A MSE 494 1_555 ? ? ? ? ? ? ? 1.331 ? covale8 covale ? ? A GLU 72 C ? ? ? 1_555 A MSE 73 N B ? A GLU 493 A MSE 494 1_555 ? ? ? ? ? ? ? 1.341 ? covale9 covale ? ? A MSE 73 C A ? ? 1_555 A ILE 74 N ? ? A MSE 494 A ILE 495 1_555 ? ? ? ? ? ? ? 1.318 ? covale10 covale ? ? A MSE 73 C B ? ? 1_555 A ILE 74 N ? ? A MSE 494 A ILE 495 1_555 ? ? ? ? ? ? ? 1.328 ? covale11 covale ? ? B GLU 4 C ? ? ? 1_555 B MSE 5 N ? ? B GLU 425 B MSE 426 1_555 ? ? ? ? ? ? ? 1.338 ? covale12 covale ? ? B MSE 5 C ? ? ? 1_555 B SER 6 N ? ? B MSE 426 B SER 427 1_555 ? ? ? ? ? ? ? 1.333 ? covale13 covale ? ? B VAL 41 C ? ? ? 1_555 B MSE 42 N ? ? B VAL 462 B MSE 463 1_555 ? ? ? ? ? ? ? 1.327 ? covale14 covale ? ? B MSE 42 C ? ? ? 1_555 B GLY 43 N ? ? B MSE 463 B GLY 464 1_555 ? ? ? ? ? ? ? 1.327 ? covale15 covale ? ? B PHE 61 C ? ? ? 1_555 B MSE 62 N ? ? B PHE 482 B MSE 483 1_555 ? ? ? ? ? ? ? 1.334 ? covale16 covale ? ? B MSE 62 C ? ? ? 1_555 B ASP 63 N ? ? B MSE 483 B ASP 484 1_555 ? ? ? ? ? ? ? 1.318 ? covale17 covale ? ? B GLU 72 C ? ? ? 1_555 B MSE 73 N ? ? B GLU 493 B MSE 494 1_555 ? ? ? ? ? ? ? 1.334 ? covale18 covale ? ? B MSE 73 C ? ? ? 1_555 B ILE 74 N ? ? B MSE 494 B ILE 495 1_555 ? ? ? ? ? ? ? 1.329 ? metalc1 metalc ? ? A LEU 26 O ? ? ? 1_555 C K . K ? ? A LEU 447 A K 601 1_555 ? ? ? ? ? ? ? 2.255 ? metalc2 metalc ? ? A ARG 55 O ? ? ? 1_555 C K . K ? ? A ARG 476 A K 601 1_555 ? ? ? ? ? ? ? 2.826 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 21 ? ALA A 25 ? LEU A 442 ALA A 446 A 2 ILE A 51 ? ARG A 55 ? ILE A 472 ARG A 476 A 3 LYS A 83 ? SER A 87 ? LYS A 504 SER A 508 A 4 VAL A 111 ? TYR A 112 ? VAL A 532 TYR A 533 B 1 LEU B 21 ? ALA B 25 ? LEU B 442 ALA B 446 B 2 ILE B 51 ? ARG B 55 ? ILE B 472 ARG B 476 B 3 LYS B 83 ? SER B 87 ? LYS B 504 SER B 508 B 4 VAL B 111 ? TYR B 112 ? VAL B 532 TYR B 533 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 24 ? N TYR A 445 O ILE A 53 ? O ILE A 474 A 2 3 N LEU A 54 ? N LEU A 475 O LEU A 85 ? O LEU A 506 A 3 4 N ILE A 86 ? N ILE A 507 O TYR A 112 ? O TYR A 533 B 1 2 N TYR B 24 ? N TYR B 445 O ARG B 55 ? O ARG B 476 B 2 3 N LEU B 54 ? N LEU B 475 O LEU B 85 ? O LEU B 506 B 3 4 N ILE B 86 ? N ILE B 507 O TYR B 112 ? O TYR B 533 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE K A 601' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE IOD A 602' AC3 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 603' AC4 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE IOD A 604' AC5 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 606' AC6 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 607' AC7 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE GOL A 608' AC8 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE GOL A 609' AC9 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE IOD B 601' BC1 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD B 602' BC2 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD B 603' BC3 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD B 604' BC4 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE IOD B 605' BC5 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD B 606' BC6 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE IOD B 607' BC7 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE IOD B 608' BC8 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE IOD B 609' BC9 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE GOL B 610' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 LEU A 26 ? LEU A 447 . ? 1_555 ? 2 AC1 5 ARG A 55 ? ARG A 476 . ? 1_555 ? 3 AC1 5 LEU A 56 ? LEU A 477 . ? 1_555 ? 4 AC1 5 LYS A 57 ? LYS A 478 . ? 1_555 ? 5 AC1 5 TRP A 58 ? TRP A 479 . ? 1_555 ? 6 AC2 3 ARG A 19 ? ARG A 440 . ? 4_465 ? 7 AC2 3 LYS A 96 ? LYS A 517 . ? 1_555 ? 8 AC2 3 IOD E . ? IOD A 603 . ? 1_555 ? 9 AC3 1 IOD D . ? IOD A 602 . ? 1_555 ? 10 AC4 5 ARG A 55 ? ARG A 476 . ? 1_555 ? 11 AC4 5 LYS A 57 ? LYS A 478 . ? 1_555 ? 12 AC4 5 SER A 87 ? SER A 508 . ? 1_555 ? 13 AC4 5 GLY A 88 ? GLY A 509 . ? 1_555 ? 14 AC4 5 HOH V . ? HOH A 707 . ? 1_555 ? 15 AC5 1 PRO A 113 ? PRO A 534 . ? 1_555 ? 16 AC6 1 ARG A 55 ? ARG A 476 . ? 1_555 ? 17 AC7 4 GLN A 11 ? GLN A 432 . ? 1_555 ? 18 AC7 4 HIS A 12 ? HIS A 433 . ? 1_555 ? 19 AC7 4 HOH V . ? HOH A 726 . ? 1_555 ? 20 AC7 4 HOH V . ? HOH A 726 . ? 7_556 ? 21 AC8 4 GLU A 108 ? GLU A 529 . ? 1_555 ? 22 AC8 4 GLN A 109 ? GLN A 530 . ? 1_555 ? 23 AC8 4 VAL A 111 ? VAL A 532 . ? 1_555 ? 24 AC8 4 GLY B 13 ? GLY B 434 . ? 8_666 ? 25 AC9 3 MSE B 62 ? MSE B 483 . ? 1_555 ? 26 AC9 3 ARG B 92 ? ARG B 513 . ? 1_555 ? 27 AC9 3 LYS B 96 ? LYS B 517 . ? 1_555 ? 28 BC1 1 ARG B 55 ? ARG B 476 . ? 1_555 ? 29 BC2 1 PRO B 113 ? PRO B 534 . ? 1_555 ? 30 BC3 1 IOD R . ? IOD B 607 . ? 4_465 ? 31 BC4 4 ARG B 55 ? ARG B 476 . ? 1_555 ? 32 BC4 4 SER B 87 ? SER B 508 . ? 1_555 ? 33 BC4 4 GLY B 88 ? GLY B 509 . ? 1_555 ? 34 BC4 4 HOH W . ? HOH B 728 . ? 1_555 ? 35 BC5 1 VAL A 98 ? VAL A 519 . ? 6_566 ? 36 BC6 2 LYS B 96 ? LYS B 517 . ? 1_555 ? 37 BC6 2 IOD O . ? IOD B 604 . ? 3_655 ? 38 BC7 4 LYS A 104 ? LYS A 525 . ? 6_566 ? 39 BC7 4 GLU A 108 ? GLU A 529 . ? 6_566 ? 40 BC7 4 GLN B 95 ? GLN B 516 . ? 1_555 ? 41 BC7 4 HOH W . ? HOH B 703 . ? 1_555 ? 42 BC8 2 GLU A 108 ? GLU A 529 . ? 8_666 ? 43 BC8 2 ARG B 14 ? ARG B 435 . ? 1_555 ? 44 BC9 4 LYS B 83 ? LYS B 504 . ? 1_555 ? 45 BC9 4 VAL B 106 ? VAL B 527 . ? 1_555 ? 46 BC9 4 HOH W . ? HOH B 712 . ? 1_555 ? 47 BC9 4 HOH W . ? HOH B 724 . ? 1_555 ? # _database_PDB_matrix.entry_id 4DGH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4DGH _atom_sites.fract_transf_matrix[1][1] 0.011007 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011007 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015342 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C I K N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 422 ? ? ? A . n A 1 2 ASN 2 423 423 ASN ASN A . n A 1 3 ALA 3 424 424 ALA ALA A . n A 1 4 GLU 4 425 425 GLU GLU A . n A 1 5 MSE 5 426 426 MSE MSE A . n A 1 6 SER 6 427 427 SER SER A . n A 1 7 TYR 7 428 428 TYR TYR A . n A 1 8 GLU 8 429 429 GLU GLU A . n A 1 9 LEU 9 430 430 LEU LEU A . n A 1 10 ALA 10 431 431 ALA ALA A . n A 1 11 GLN 11 432 432 GLN GLN A . n A 1 12 HIS 12 433 433 HIS HIS A . n A 1 13 GLY 13 434 434 GLY GLY A . n A 1 14 ARG 14 435 435 ARG ARG A . n A 1 15 SER 15 436 436 SER SER A . n A 1 16 THR 16 437 437 THR THR A . n A 1 17 LEU 17 438 438 LEU LEU A . n A 1 18 PRO 18 439 439 PRO PRO A . n A 1 19 ARG 19 440 440 ARG ARG A . n A 1 20 GLU 20 441 441 GLU GLU A . n A 1 21 LEU 21 442 442 LEU LEU A . n A 1 22 ALA 22 443 443 ALA ALA A . n A 1 23 VAL 23 444 444 VAL VAL A . n A 1 24 TYR 24 445 445 TYR TYR A . n A 1 25 ALA 25 446 446 ALA ALA A . n A 1 26 LEU 26 447 447 LEU LEU A . n A 1 27 GLU 27 448 448 GLU GLU A . n A 1 28 GLY 28 449 449 GLY GLY A . n A 1 29 PRO 29 450 450 PRO PRO A . n A 1 30 PHE 30 451 451 PHE PHE A . n A 1 31 PHE 31 452 452 PHE PHE A . n A 1 32 PHE 32 453 453 PHE PHE A . n A 1 33 ALA 33 454 454 ALA ALA A . n A 1 34 ALA 34 455 455 ALA ALA A . n A 1 35 ALA 35 456 456 ALA ALA A . n A 1 36 GLU 36 457 457 GLU GLU A . n A 1 37 THR 37 458 458 THR THR A . n A 1 38 PHE 38 459 459 PHE PHE A . n A 1 39 GLU 39 460 460 GLU GLU A . n A 1 40 ARG 40 461 461 ARG ARG A . n A 1 41 VAL 41 462 462 VAL VAL A . n A 1 42 MSE 42 463 463 MSE MSE A . n A 1 43 GLY 43 464 464 GLY GLY A . n A 1 44 SER 44 465 465 SER SER A . n A 1 45 ILE 45 466 466 ILE ILE A . n A 1 46 GLN 46 467 467 GLN GLN A . n A 1 47 GLU 47 468 468 GLU GLU A . n A 1 48 THR 48 469 469 THR THR A . n A 1 49 PRO 49 470 470 PRO PRO A . n A 1 50 GLN 50 471 471 GLN GLN A . n A 1 51 ILE 51 472 472 ILE ILE A . n A 1 52 LEU 52 473 473 LEU LEU A . n A 1 53 ILE 53 474 474 ILE ILE A . n A 1 54 LEU 54 475 475 LEU LEU A . n A 1 55 ARG 55 476 476 ARG ARG A . n A 1 56 LEU 56 477 477 LEU LEU A . n A 1 57 LYS 57 478 478 LYS LYS A . n A 1 58 TRP 58 479 479 TRP TRP A . n A 1 59 VAL 59 480 480 VAL VAL A . n A 1 60 PRO 60 481 481 PRO PRO A . n A 1 61 PHE 61 482 482 PHE PHE A . n A 1 62 MSE 62 483 483 MSE MSE A . n A 1 63 ASP 63 484 484 ASP ASP A . n A 1 64 ILE 64 485 485 ILE ILE A . n A 1 65 THR 65 486 486 THR THR A . n A 1 66 GLY 66 487 487 GLY GLY A . n A 1 67 ILE 67 488 488 ILE ILE A . n A 1 68 GLN 68 489 489 GLN GLN A . n A 1 69 THR 69 490 490 THR THR A . n A 1 70 LEU 70 491 491 LEU LEU A . n A 1 71 GLU 71 492 492 GLU GLU A . n A 1 72 GLU 72 493 493 GLU GLU A . n A 1 73 MSE 73 494 494 MSE MSE A . n A 1 74 ILE 74 495 495 ILE ILE A . n A 1 75 GLN 75 496 496 GLN GLN A . n A 1 76 SER 76 497 497 SER SER A . n A 1 77 PHE 77 498 498 PHE PHE A . n A 1 78 HIS 78 499 499 HIS HIS A . n A 1 79 LYS 79 500 500 LYS LYS A . n A 1 80 ARG 80 501 501 ARG ARG A . n A 1 81 GLY 81 502 502 GLY GLY A . n A 1 82 ILE 82 503 503 ILE ILE A . n A 1 83 LYS 83 504 504 LYS LYS A . n A 1 84 VAL 84 505 505 VAL VAL A . n A 1 85 LEU 85 506 506 LEU LEU A . n A 1 86 ILE 86 507 507 ILE ILE A . n A 1 87 SER 87 508 508 SER SER A . n A 1 88 GLY 88 509 509 GLY GLY A . n A 1 89 ALA 89 510 510 ALA ALA A . n A 1 90 ASN 90 511 511 ASN ASN A . n A 1 91 SER 91 512 512 SER SER A . n A 1 92 ARG 92 513 513 ARG ARG A . n A 1 93 VAL 93 514 514 VAL VAL A . n A 1 94 SER 94 515 515 SER SER A . n A 1 95 GLN 95 516 516 GLN GLN A . n A 1 96 LYS 96 517 517 LYS LYS A . n A 1 97 LEU 97 518 518 LEU LEU A . n A 1 98 VAL 98 519 519 VAL VAL A . n A 1 99 LYS 99 520 520 LYS LYS A . n A 1 100 ALA 100 521 521 ALA ALA A . n A 1 101 GLY 101 522 522 GLY GLY A . n A 1 102 ILE 102 523 523 ILE ILE A . n A 1 103 VAL 103 524 524 VAL VAL A . n A 1 104 LYS 104 525 525 LYS LYS A . n A 1 105 LEU 105 526 526 LEU LEU A . n A 1 106 VAL 106 527 527 VAL VAL A . n A 1 107 GLY 107 528 528 GLY GLY A . n A 1 108 GLU 108 529 529 GLU GLU A . n A 1 109 GLN 109 530 530 GLN GLN A . n A 1 110 ASN 110 531 531 ASN ASN A . n A 1 111 VAL 111 532 532 VAL VAL A . n A 1 112 TYR 112 533 533 TYR TYR A . n A 1 113 PRO 113 534 534 PRO PRO A . n A 1 114 VAL 114 535 535 VAL VAL A . n A 1 115 PHE 115 536 536 PHE PHE A . n A 1 116 GLU 116 537 537 GLU GLU A . n A 1 117 GLY 117 538 538 GLY GLY A . n A 1 118 ALA 118 539 539 ALA ALA A . n A 1 119 LEU 119 540 540 LEU LEU A . n A 1 120 SER 120 541 541 SER SER A . n A 1 121 ALA 121 542 542 ALA ALA A . n A 1 122 ALA 122 543 543 ALA ALA A . n A 1 123 LEU 123 544 544 LEU LEU A . n A 1 124 THR 124 545 545 THR THR A . n A 1 125 GLU 125 546 546 GLU GLU A . n A 1 126 ILE 126 547 547 ILE ILE A . n A 1 127 GLU 127 548 548 GLU GLU A . n A 1 128 ALA 128 549 549 ALA ALA A . n A 1 129 GLN 129 550 550 GLN GLN A . n A 1 130 PRO 130 551 ? ? ? A . n B 1 1 SER 1 422 ? ? ? B . n B 1 2 ASN 2 423 423 ASN ALA B . n B 1 3 ALA 3 424 424 ALA ALA B . n B 1 4 GLU 4 425 425 GLU GLU B . n B 1 5 MSE 5 426 426 MSE MSE B . n B 1 6 SER 6 427 427 SER SER B . n B 1 7 TYR 7 428 428 TYR TYR B . n B 1 8 GLU 8 429 429 GLU GLU B . n B 1 9 LEU 9 430 430 LEU LEU B . n B 1 10 ALA 10 431 431 ALA ALA B . n B 1 11 GLN 11 432 432 GLN GLN B . n B 1 12 HIS 12 433 433 HIS HIS B . n B 1 13 GLY 13 434 434 GLY GLY B . n B 1 14 ARG 14 435 435 ARG ARG B . n B 1 15 SER 15 436 436 SER SER B . n B 1 16 THR 16 437 437 THR THR B . n B 1 17 LEU 17 438 438 LEU LEU B . n B 1 18 PRO 18 439 439 PRO PRO B . n B 1 19 ARG 19 440 440 ARG ARG B . n B 1 20 GLU 20 441 441 GLU GLU B . n B 1 21 LEU 21 442 442 LEU LEU B . n B 1 22 ALA 22 443 443 ALA ALA B . n B 1 23 VAL 23 444 444 VAL VAL B . n B 1 24 TYR 24 445 445 TYR TYR B . n B 1 25 ALA 25 446 446 ALA ALA B . n B 1 26 LEU 26 447 447 LEU LEU B . n B 1 27 GLU 27 448 448 GLU GLU B . n B 1 28 GLY 28 449 449 GLY GLY B . n B 1 29 PRO 29 450 450 PRO PRO B . n B 1 30 PHE 30 451 451 PHE PHE B . n B 1 31 PHE 31 452 452 PHE PHE B . n B 1 32 PHE 32 453 453 PHE PHE B . n B 1 33 ALA 33 454 454 ALA ALA B . n B 1 34 ALA 34 455 455 ALA ALA B . n B 1 35 ALA 35 456 456 ALA ALA B . n B 1 36 GLU 36 457 457 GLU GLU B . n B 1 37 THR 37 458 458 THR THR B . n B 1 38 PHE 38 459 459 PHE PHE B . n B 1 39 GLU 39 460 460 GLU GLU B . n B 1 40 ARG 40 461 461 ARG ARG B . n B 1 41 VAL 41 462 462 VAL VAL B . n B 1 42 MSE 42 463 463 MSE MSE B . n B 1 43 GLY 43 464 464 GLY GLY B . n B 1 44 SER 44 465 465 SER SER B . n B 1 45 ILE 45 466 466 ILE ILE B . n B 1 46 GLN 46 467 467 GLN GLN B . n B 1 47 GLU 47 468 468 GLU GLU B . n B 1 48 THR 48 469 469 THR THR B . n B 1 49 PRO 49 470 470 PRO PRO B . n B 1 50 GLN 50 471 471 GLN GLN B . n B 1 51 ILE 51 472 472 ILE ILE B . n B 1 52 LEU 52 473 473 LEU LEU B . n B 1 53 ILE 53 474 474 ILE ILE B . n B 1 54 LEU 54 475 475 LEU LEU B . n B 1 55 ARG 55 476 476 ARG ARG B . n B 1 56 LEU 56 477 477 LEU LEU B . n B 1 57 LYS 57 478 478 LYS LYS B . n B 1 58 TRP 58 479 479 TRP TRP B . n B 1 59 VAL 59 480 480 VAL VAL B . n B 1 60 PRO 60 481 481 PRO PRO B . n B 1 61 PHE 61 482 482 PHE PHE B . n B 1 62 MSE 62 483 483 MSE MSE B . n B 1 63 ASP 63 484 484 ASP ASP B . n B 1 64 ILE 64 485 485 ILE ILE B . n B 1 65 THR 65 486 486 THR THR B . n B 1 66 GLY 66 487 487 GLY GLY B . n B 1 67 ILE 67 488 488 ILE ILE B . n B 1 68 GLN 68 489 489 GLN GLN B . n B 1 69 THR 69 490 490 THR THR B . n B 1 70 LEU 70 491 491 LEU LEU B . n B 1 71 GLU 71 492 492 GLU GLU B . n B 1 72 GLU 72 493 493 GLU GLU B . n B 1 73 MSE 73 494 494 MSE MSE B . n B 1 74 ILE 74 495 495 ILE ILE B . n B 1 75 GLN 75 496 496 GLN GLN B . n B 1 76 SER 76 497 497 SER SER B . n B 1 77 PHE 77 498 498 PHE PHE B . n B 1 78 HIS 78 499 499 HIS HIS B . n B 1 79 LYS 79 500 500 LYS LYS B . n B 1 80 ARG 80 501 501 ARG ARG B . n B 1 81 GLY 81 502 502 GLY GLY B . n B 1 82 ILE 82 503 503 ILE ILE B . n B 1 83 LYS 83 504 504 LYS LYS B . n B 1 84 VAL 84 505 505 VAL VAL B . n B 1 85 LEU 85 506 506 LEU LEU B . n B 1 86 ILE 86 507 507 ILE ILE B . n B 1 87 SER 87 508 508 SER SER B . n B 1 88 GLY 88 509 509 GLY GLY B . n B 1 89 ALA 89 510 510 ALA ALA B . n B 1 90 ASN 90 511 511 ASN ASN B . n B 1 91 SER 91 512 512 SER SER B . n B 1 92 ARG 92 513 513 ARG ARG B . n B 1 93 VAL 93 514 514 VAL VAL B . n B 1 94 SER 94 515 515 SER SER B . n B 1 95 GLN 95 516 516 GLN GLN B . n B 1 96 LYS 96 517 517 LYS LYS B . n B 1 97 LEU 97 518 518 LEU LEU B . n B 1 98 VAL 98 519 519 VAL VAL B . n B 1 99 LYS 99 520 520 LYS LYS B . n B 1 100 ALA 100 521 521 ALA ALA B . n B 1 101 GLY 101 522 522 GLY GLY B . n B 1 102 ILE 102 523 523 ILE ILE B . n B 1 103 VAL 103 524 524 VAL VAL B . n B 1 104 LYS 104 525 525 LYS LYS B . n B 1 105 LEU 105 526 526 LEU LEU B . n B 1 106 VAL 106 527 527 VAL VAL B . n B 1 107 GLY 107 528 528 GLY GLY B . n B 1 108 GLU 108 529 529 GLU GLU B . n B 1 109 GLN 109 530 530 GLN GLN B . n B 1 110 ASN 110 531 531 ASN ASN B . n B 1 111 VAL 111 532 532 VAL VAL B . n B 1 112 TYR 112 533 533 TYR TYR B . n B 1 113 PRO 113 534 534 PRO PRO B . n B 1 114 VAL 114 535 535 VAL VAL B . n B 1 115 PHE 115 536 536 PHE PHE B . n B 1 116 GLU 116 537 537 GLU GLU B . n B 1 117 GLY 117 538 538 GLY GLY B . n B 1 118 ALA 118 539 539 ALA ALA B . n B 1 119 LEU 119 540 540 LEU LEU B . n B 1 120 SER 120 541 541 SER SER B . n B 1 121 ALA 121 542 542 ALA ALA B . n B 1 122 ALA 122 543 543 ALA ALA B . n B 1 123 LEU 123 544 544 LEU LEU B . n B 1 124 THR 124 545 545 THR THR B . n B 1 125 GLU 125 546 546 GLU GLU B . n B 1 126 ILE 126 547 547 ILE ILE B . n B 1 127 GLU 127 548 548 GLU GLU B . n B 1 128 ALA 128 549 549 ALA ALA B . n B 1 129 GLN 129 550 550 GLN GLN B . n B 1 130 PRO 130 551 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 5 A MSE 426 ? MET SELENOMETHIONINE 2 A MSE 42 A MSE 463 ? MET SELENOMETHIONINE 3 A MSE 62 A MSE 483 ? MET SELENOMETHIONINE 4 A MSE 73 A MSE 494 ? MET SELENOMETHIONINE 5 B MSE 5 B MSE 426 ? MET SELENOMETHIONINE 6 B MSE 42 B MSE 463 ? MET SELENOMETHIONINE 7 B MSE 62 B MSE 483 ? MET SELENOMETHIONINE 8 B MSE 73 B MSE 494 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA tetrameric 4 2 author_and_software_defined_assembly PISA tetrameric 4 3 software_defined_assembly PISA octameric 8 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2,3,4 A,C,D,E,F,G,H,I,J,K,V 2 1,2,3,4 B,L,M,N,O,P,Q,R,S,T,U,W 3 1,2,3,4 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 10420 ? 1 MORE -43 ? 1 'SSA (A^2)' 21650 ? 2 'ABSA (A^2)' 10340 ? 2 MORE -42 ? 2 'SSA (A^2)' 22730 ? 3 'ABSA (A^2)' 25440 ? 3 MORE -111 ? 3 'SSA (A^2)' 40280 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_675 -x+1,-y+2,z -1.0000000000 0.0000000000 0.0000000000 90.8500000000 0.0000000000 -1.0000000000 0.0000000000 181.7000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_655 -y+3/2,x+1/2,z 0.0000000000 -1.0000000000 0.0000000000 136.2750000000 1.0000000000 0.0000000000 0.0000000000 45.4250000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_465 y-1/2,-x+3/2,z 0.0000000000 1.0000000000 0.0000000000 -45.4250000000 -1.0000000000 0.0000000000 0.0000000000 136.2750000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id O _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id LEU _pdbx_struct_conn_angle.ptnr1_label_seq_id 26 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id LEU _pdbx_struct_conn_angle.ptnr1_auth_seq_id 447 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id K _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id C _pdbx_struct_conn_angle.ptnr2_label_comp_id K _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id K _pdbx_struct_conn_angle.ptnr2_auth_seq_id 601 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id A _pdbx_struct_conn_angle.ptnr3_label_comp_id ARG _pdbx_struct_conn_angle.ptnr3_label_seq_id 55 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id ARG _pdbx_struct_conn_angle.ptnr3_auth_seq_id 476 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 110.2 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-02-08 2 'Structure model' 1 1 2012-02-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group Other # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 40.6170 70.9924 19.5473 0.1094 0.0734 0.0771 0.0084 0.0219 -0.0096 0.9158 1.1135 0.1018 0.1047 0.2966 0.0055 -0.0465 -0.0538 0.0114 -0.0525 0.0267 0.0493 0.0050 -0.0179 0.0199 'X-RAY DIFFRACTION' 2 ? refined 50.1902 70.9373 50.8030 0.1266 0.0838 0.0579 0.0130 0.0355 0.0015 1.1750 0.8235 0.1825 0.1401 0.2209 -0.2830 -0.1114 0.0307 -0.0545 0.0289 0.0664 -0.1077 0.0129 -0.0194 0.0449 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 423 A 550 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 702 A 758 ? . . . . ? 'X-RAY DIFFRACTION' 3 2 B 423 B 550 ? . . . . ? 'X-RAY DIFFRACTION' 4 2 B 701 B 741 ? . . . . ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 PHASER phasing . ? 2 REFMAC refinement 5.6.0117 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 I _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 IOD _pdbx_validate_close_contact.auth_seq_id_1 608 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 703 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.85 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 737 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 753 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_465 _pdbx_validate_symm_contact.dist 2.10 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CE2 A TRP 479 ? ? CD2 A TRP 479 ? ? 1.492 1.409 0.083 0.012 N 2 1 CE2 B TRP 479 ? ? CD2 B TRP 479 ? ? 1.492 1.409 0.083 0.012 N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 LEU _pdbx_validate_rmsd_angle.auth_seq_id_1 447 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 LEU _pdbx_validate_rmsd_angle.auth_seq_id_2 447 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CD2 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 LEU _pdbx_validate_rmsd_angle.auth_seq_id_3 447 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 97.72 _pdbx_validate_rmsd_angle.angle_target_value 111.00 _pdbx_validate_rmsd_angle.angle_deviation -13.28 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.70 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 451 ? ? -107.43 65.82 2 1 PHE B 451 ? ? -103.29 65.01 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 423 ? CG ? A ASN 2 CG 2 1 Y 1 A ASN 423 ? OD1 ? A ASN 2 OD1 3 1 Y 1 A ASN 423 ? ND2 ? A ASN 2 ND2 4 1 Y 1 A GLN 550 ? CG ? A GLN 129 CG 5 1 Y 1 A GLN 550 ? CD ? A GLN 129 CD 6 1 Y 1 A GLN 550 ? OE1 ? A GLN 129 OE1 7 1 Y 1 A GLN 550 ? NE2 ? A GLN 129 NE2 8 1 Y 1 B ASN 423 ? N ? B ASN 2 N 9 1 Y 1 B ASN 423 ? CG ? B ASN 2 CG 10 1 Y 1 B ASN 423 ? OD1 ? B ASN 2 OD1 11 1 Y 1 B ASN 423 ? ND2 ? B ASN 2 ND2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 422 ? A SER 1 2 1 Y 1 A PRO 551 ? A PRO 130 3 1 Y 1 B SER 422 ? B SER 1 4 1 Y 1 B PRO 551 ? B PRO 130 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 'IODIDE ION' IOD 4 GLYCEROL GOL 5 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K 1 601 1 K K A . D 3 IOD 1 602 611 IOD IOD A . E 3 IOD 1 603 612 IOD IOD A . F 3 IOD 1 604 602 IOD IOD A . G 3 IOD 1 605 604 IOD IOD A . H 3 IOD 1 606 606 IOD IOD A . I 3 IOD 1 607 608 IOD IOD A . J 4 GOL 1 608 1 GOL GOL A . K 4 GOL 1 609 2 GOL GOL A . L 3 IOD 1 601 609 IOD IOD B . M 3 IOD 1 602 610 IOD IOD B . N 3 IOD 1 603 603 IOD IOD B . O 3 IOD 1 604 605 IOD IOD B . P 3 IOD 1 605 607 IOD IOD B . Q 3 IOD 1 606 613 IOD IOD B . R 3 IOD 1 607 614 IOD IOD B . S 3 IOD 1 608 615 IOD IOD B . T 3 IOD 1 609 616 IOD IOD B . U 4 GOL 1 610 3 GOL GOL B . V 5 HOH 1 701 1 HOH HOH A . V 5 HOH 2 702 5 HOH HOH A . V 5 HOH 3 703 6 HOH HOH A . V 5 HOH 4 704 7 HOH HOH A . V 5 HOH 5 705 8 HOH HOH A . V 5 HOH 6 706 9 HOH HOH A . V 5 HOH 7 707 11 HOH HOH A . V 5 HOH 8 708 13 HOH HOH A . V 5 HOH 9 709 14 HOH HOH A . V 5 HOH 10 710 15 HOH HOH A . V 5 HOH 11 711 17 HOH HOH A . V 5 HOH 12 712 18 HOH HOH A . V 5 HOH 13 713 19 HOH HOH A . V 5 HOH 14 714 22 HOH HOH A . V 5 HOH 15 715 23 HOH HOH A . V 5 HOH 16 716 24 HOH HOH A . V 5 HOH 17 717 25 HOH HOH A . V 5 HOH 18 718 27 HOH HOH A . V 5 HOH 19 719 28 HOH HOH A . V 5 HOH 20 720 29 HOH HOH A . V 5 HOH 21 721 30 HOH HOH A . V 5 HOH 22 722 31 HOH HOH A . V 5 HOH 23 723 33 HOH HOH A . V 5 HOH 24 724 35 HOH HOH A . V 5 HOH 25 725 37 HOH HOH A . V 5 HOH 26 726 38 HOH HOH A . V 5 HOH 27 727 39 HOH HOH A . V 5 HOH 28 728 40 HOH HOH A . V 5 HOH 29 729 41 HOH HOH A . V 5 HOH 30 730 42 HOH HOH A . V 5 HOH 31 731 43 HOH HOH A . V 5 HOH 32 732 44 HOH HOH A . V 5 HOH 33 733 45 HOH HOH A . V 5 HOH 34 734 46 HOH HOH A . V 5 HOH 35 735 47 HOH HOH A . V 5 HOH 36 736 49 HOH HOH A . V 5 HOH 37 737 50 HOH HOH A . V 5 HOH 38 738 51 HOH HOH A . V 5 HOH 39 739 53 HOH HOH A . V 5 HOH 40 740 55 HOH HOH A . V 5 HOH 41 741 56 HOH HOH A . V 5 HOH 42 742 57 HOH HOH A . V 5 HOH 43 743 59 HOH HOH A . V 5 HOH 44 744 61 HOH HOH A . V 5 HOH 45 745 65 HOH HOH A . V 5 HOH 46 746 67 HOH HOH A . V 5 HOH 47 747 75 HOH HOH A . V 5 HOH 48 748 77 HOH HOH A . V 5 HOH 49 749 91 HOH HOH A . V 5 HOH 50 750 95 HOH HOH A . V 5 HOH 51 751 97 HOH HOH A . V 5 HOH 52 752 100 HOH HOH A . V 5 HOH 53 753 101 HOH HOH A . V 5 HOH 54 754 102 HOH HOH A . V 5 HOH 55 755 103 HOH HOH A . V 5 HOH 56 756 104 HOH HOH A . V 5 HOH 57 757 105 HOH HOH A . V 5 HOH 58 758 106 HOH HOH A . W 5 HOH 1 701 4 HOH HOH B . W 5 HOH 2 702 12 HOH HOH B . W 5 HOH 3 703 16 HOH HOH B . W 5 HOH 4 704 20 HOH HOH B . W 5 HOH 5 705 21 HOH HOH B . W 5 HOH 6 706 26 HOH HOH B . W 5 HOH 7 707 32 HOH HOH B . W 5 HOH 8 708 34 HOH HOH B . W 5 HOH 9 709 36 HOH HOH B . W 5 HOH 10 710 48 HOH HOH B . W 5 HOH 11 711 52 HOH HOH B . W 5 HOH 12 712 54 HOH HOH B . W 5 HOH 13 713 58 HOH HOH B . W 5 HOH 14 714 60 HOH HOH B . W 5 HOH 15 715 62 HOH HOH B . W 5 HOH 16 716 63 HOH HOH B . W 5 HOH 17 717 66 HOH HOH B . W 5 HOH 18 718 68 HOH HOH B . W 5 HOH 19 719 69 HOH HOH B . W 5 HOH 20 720 70 HOH HOH B . W 5 HOH 21 721 72 HOH HOH B . W 5 HOH 22 722 74 HOH HOH B . W 5 HOH 23 723 76 HOH HOH B . W 5 HOH 24 724 78 HOH HOH B . W 5 HOH 25 725 79 HOH HOH B . W 5 HOH 26 726 80 HOH HOH B . W 5 HOH 27 727 81 HOH HOH B . W 5 HOH 28 728 82 HOH HOH B . W 5 HOH 29 729 83 HOH HOH B . W 5 HOH 30 730 84 HOH HOH B . W 5 HOH 31 731 85 HOH HOH B . W 5 HOH 32 732 86 HOH HOH B . W 5 HOH 33 733 88 HOH HOH B . W 5 HOH 34 734 89 HOH HOH B . W 5 HOH 35 735 90 HOH HOH B . W 5 HOH 36 736 92 HOH HOH B . W 5 HOH 37 737 93 HOH HOH B . W 5 HOH 38 738 94 HOH HOH B . W 5 HOH 39 739 98 HOH HOH B . W 5 HOH 40 740 99 HOH HOH B . W 5 HOH 41 741 101 HOH HOH B . #