HEADER TRANSFERASE/TRANSFERASE INHIBITOR 26-JAN-12 4DGN TITLE CRYSTAL STRUCTURE OF MAIZE CK2 IN COMPLEX WITH THE INHIBITOR LUTEOLIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CASEIN KINASE II SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CK II, CK2-ALPHA; COMPND 5 EC: 2.7.11.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZEA MAYS; SOURCE 3 ORGANISM_COMMON: MAIZE; SOURCE 4 ORGANISM_TAXID: 4577; SOURCE 5 GENE: ACK2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN KINASE, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.LOLLI,M.MAZZORANA,R.BATTISTUTTA REVDAT 4 09-OCT-24 4DGN 1 REMARK LINK REVDAT 3 02-JAN-13 4DGN 1 JRNL REVDAT 2 05-SEP-12 4DGN 1 JRNL REVDAT 1 01-AUG-12 4DGN 0 JRNL AUTH G.LOLLI,G.COZZA,M.MAZZORANA,E.TIBALDI,L.CESARO, JRNL AUTH 2 A.DONELLA-DEANA,F.MEGGIO,A.VENERANDO,C.FRANCHIN,S.SARNO, JRNL AUTH 3 R.BATTISTUTTA,L.A.PINNA JRNL TITL INHIBITION OF PROTEIN KINASE CK2 BY FLAVONOIDS AND JRNL TITL 2 TYRPHOSTINS. A STRUCTURAL INSIGHT. JRNL REF BIOCHEMISTRY V. 51 6097 2012 JRNL REFN ISSN 0006-2960 JRNL PMID 22794353 JRNL DOI 10.1021/BI300531C REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 69.47 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 36947 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1849 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2484 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.99 REMARK 3 BIN R VALUE (WORKING SET) : 0.3520 REMARK 3 BIN FREE R VALUE SET COUNT : 146 REMARK 3 BIN FREE R VALUE : 0.3800 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2722 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 146 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -13.34000 REMARK 3 B22 (A**2) : -5.65000 REMARK 3 B33 (A**2) : 18.99000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -27.02000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.026 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.023 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.074 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.309 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2817 ; 0.012 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3812 ; 1.474 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 327 ; 5.201 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 145 ;36.565 ;23.862 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 506 ;14.963 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;20.128 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 399 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2156 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 184 REMARK 3 ORIGIN FOR THE GROUP (A): 21.7847 7.8676 11.1346 REMARK 3 T TENSOR REMARK 3 T11: 0.1231 T22: 0.1112 REMARK 3 T33: 0.1680 T12: -0.0275 REMARK 3 T13: -0.0329 T23: -0.0411 REMARK 3 L TENSOR REMARK 3 L11: 3.2576 L22: 1.2853 REMARK 3 L33: 2.3669 L12: 1.2775 REMARK 3 L13: 1.8102 L23: 0.2589 REMARK 3 S TENSOR REMARK 3 S11: -0.2227 S12: 0.0873 S13: 0.1586 REMARK 3 S21: 0.0794 S22: 0.0385 S23: -0.1972 REMARK 3 S31: -0.4197 S32: 0.2946 S33: 0.1843 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 185 A 256 REMARK 3 ORIGIN FOR THE GROUP (A): 17.5827 -13.5670 9.0729 REMARK 3 T TENSOR REMARK 3 T11: 0.1094 T22: 0.1270 REMARK 3 T33: 0.2765 T12: 0.0773 REMARK 3 T13: -0.1179 T23: -0.1062 REMARK 3 L TENSOR REMARK 3 L11: 2.6265 L22: 2.0448 REMARK 3 L33: 3.1614 L12: 0.4612 REMARK 3 L13: 0.1422 L23: -0.9047 REMARK 3 S TENSOR REMARK 3 S11: 0.1580 S12: -0.0812 S13: -0.5289 REMARK 3 S21: 0.0835 S22: 0.1437 S23: -0.4887 REMARK 3 S31: 0.4728 S32: 0.3624 S33: -0.3018 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 257 A 294 REMARK 3 ORIGIN FOR THE GROUP (A): 11.4815 -21.2552 9.7737 REMARK 3 T TENSOR REMARK 3 T11: 0.2695 T22: 0.1990 REMARK 3 T33: 0.3711 T12: 0.0091 REMARK 3 T13: -0.1041 T23: -0.0330 REMARK 3 L TENSOR REMARK 3 L11: 1.9073 L22: 1.8519 REMARK 3 L33: 3.3043 L12: -0.4888 REMARK 3 L13: 0.1893 L23: 0.1261 REMARK 3 S TENSOR REMARK 3 S11: 0.1552 S12: -0.0899 S13: -0.6485 REMARK 3 S21: -0.0557 S22: 0.0673 S23: 0.0007 REMARK 3 S31: 0.5212 S32: 0.1378 S33: -0.2224 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 295 A 331 REMARK 3 ORIGIN FOR THE GROUP (A): 2.6269 -6.0723 6.2151 REMARK 3 T TENSOR REMARK 3 T11: 0.0109 T22: 0.0726 REMARK 3 T33: 0.0409 T12: -0.0072 REMARK 3 T13: -0.0150 T23: 0.0091 REMARK 3 L TENSOR REMARK 3 L11: 5.1608 L22: 2.6673 REMARK 3 L33: 3.7965 L12: -1.5103 REMARK 3 L13: -0.1836 L23: 0.1639 REMARK 3 S TENSOR REMARK 3 S11: 0.0367 S12: -0.0485 S13: -0.2140 REMARK 3 S21: 0.0452 S22: 0.2508 S23: 0.0880 REMARK 3 S31: 0.1869 S32: -0.1996 S33: -0.2875 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4DGN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000070304. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 5.2R REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36948 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 69.466 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.41900 REMARK 200 R SYM FOR SHELL (I) : 0.41900 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL, 10-20% PEG 4000, 0.2 M REMARK 280 NA-ACETATE, PH 8, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 71.43150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.68300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 71.43150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.68300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 556 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 257 O HOH A 569 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 148 CG HIS A 148 CD2 0.059 REMARK 500 HIS A 321 CG HIS A 321 CD2 0.062 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 107 16.52 59.58 REMARK 500 ASP A 156 41.80 -153.07 REMARK 500 ASP A 175 77.67 49.60 REMARK 500 ALA A 193 170.70 64.51 REMARK 500 ASP A 205 33.44 75.52 REMARK 500 ASP A 210 -159.35 -149.97 REMARK 500 TYR A 234 75.97 -104.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LU2 A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4DGO RELATED DB: PDB REMARK 900 RELATED ID: 4DGM RELATED DB: PDB DBREF 4DGN A 7 332 UNP P28523 CSK2A_MAIZE 2 327 SEQRES 1 A 326 SER LYS ALA ARG VAL TYR ALA ASP VAL ASN VAL LEU ARG SEQRES 2 A 326 PRO LYS GLU TYR TRP ASP TYR GLU ALA LEU THR VAL GLN SEQRES 3 A 326 TRP GLY GLU GLN ASP ASP TYR GLU VAL VAL ARG LYS VAL SEQRES 4 A 326 GLY ARG GLY LYS TYR SER GLU VAL PHE GLU GLY ILE ASN SEQRES 5 A 326 VAL ASN ASN ASN GLU LYS CYS ILE ILE LYS ILE LEU LYS SEQRES 6 A 326 PRO VAL LYS LYS LYS LYS ILE LYS ARG GLU ILE LYS ILE SEQRES 7 A 326 LEU GLN ASN LEU CSO GLY GLY PRO ASN ILE VAL LYS LEU SEQRES 8 A 326 LEU ASP ILE VAL ARG ASP GLN HIS SER LYS THR PRO SER SEQRES 9 A 326 LEU ILE PHE GLU TYR VAL ASN ASN THR ASP PHE LYS VAL SEQRES 10 A 326 LEU TYR PRO THR LEU THR ASP TYR ASP ILE ARG TYR TYR SEQRES 11 A 326 ILE TYR GLU LEU LEU LYS ALA LEU ASP TYR CYS HIS SER SEQRES 12 A 326 GLN GLY ILE MET HIS ARG ASP VAL LYS PRO HIS ASN VAL SEQRES 13 A 326 MET ILE ASP HIS GLU LEU ARG LYS LEU ARG LEU ILE ASP SEQRES 14 A 326 TRP GLY LEU ALA GLU PHE TYR HIS PRO GLY LYS GLU TYR SEQRES 15 A 326 ASN VAL ARG VAL ALA SER ARG TYR PHE LYS GLY PRO GLU SEQRES 16 A 326 LEU LEU VAL ASP LEU GLN ASP TYR ASP TYR SER LEU ASP SEQRES 17 A 326 MET TRP SER LEU GLY CYS MET PHE ALA GLY MET ILE PHE SEQRES 18 A 326 ARG LYS GLU PRO PHE PHE TYR GLY HIS ASP ASN HIS ASP SEQRES 19 A 326 GLN LEU VAL LYS ILE ALA LYS VAL LEU GLY THR ASP GLY SEQRES 20 A 326 LEU ASN VAL TYR LEU ASN LYS TYR ARG ILE GLU LEU ASP SEQRES 21 A 326 PRO GLN LEU GLU ALA LEU VAL GLY ARG HIS SER ARG LYS SEQRES 22 A 326 PRO TRP LEU LYS PHE MET ASN ALA ASP ASN GLN HIS LEU SEQRES 23 A 326 VAL SER PRO GLU ALA ILE ASP PHE LEU ASP LYS LEU LEU SEQRES 24 A 326 ARG TYR ASP HIS GLN GLU ARG LEU THR ALA LEU GLU ALA SEQRES 25 A 326 MET THR HIS PRO TYR PHE GLN GLN VAL ARG ALA ALA GLU SEQRES 26 A 326 ASN MODRES 4DGN CSO A 89 CYS S-HYDROXYCYSTEINE HET CSO A 89 7 HET LU2 A 401 21 HETNAM CSO S-HYDROXYCYSTEINE HETNAM LU2 2-(3,4-DIHYDROXYPHENYL)-5,7-DIHYDROXY-4H-CHROMEN-4-ONE HETSYN LU2 LUTEOLIN FORMUL 1 CSO C3 H7 N O3 S FORMUL 2 LU2 C15 H10 O6 FORMUL 3 HOH *146(H2 O) HELIX 1 1 ASP A 14 ARG A 19 1 6 HELIX 2 2 PRO A 20 ASP A 25 1 6 HELIX 3 3 TYR A 26 LEU A 29 5 4 HELIX 4 4 GLU A 35 ASP A 37 5 3 HELIX 5 5 LYS A 74 CSO A 89 1 16 HELIX 6 6 ASP A 120 TYR A 125 1 6 HELIX 7 7 PRO A 126 LEU A 128 5 3 HELIX 8 8 THR A 129 GLN A 150 1 22 HELIX 9 9 LYS A 158 HIS A 160 5 3 HELIX 10 10 SER A 194 LYS A 198 5 5 HELIX 11 11 GLY A 199 ASP A 205 1 7 HELIX 12 12 SER A 212 ARG A 228 1 17 HELIX 13 13 ASP A 237 GLY A 250 1 14 HELIX 14 14 GLY A 250 TYR A 261 1 12 HELIX 15 15 ASP A 266 GLY A 274 1 9 HELIX 16 16 PRO A 280 MET A 285 5 6 HELIX 17 17 ASN A 289 VAL A 293 5 5 HELIX 18 18 SER A 294 LEU A 305 1 12 HELIX 19 19 THR A 314 HIS A 321 1 8 HELIX 20 20 PHE A 324 ASN A 332 1 9 SHEET 1 A 5 TYR A 39 ARG A 47 0 SHEET 2 A 5 SER A 51 ASN A 58 -1 O GLU A 55 N ARG A 43 SHEET 3 A 5 GLU A 63 LEU A 70 -1 O ILE A 69 N GLU A 52 SHEET 4 A 5 PRO A 109 GLU A 114 -1 O LEU A 111 N LYS A 68 SHEET 5 A 5 LEU A 97 ARG A 102 -1 N VAL A 101 O SER A 110 SHEET 1 B 2 ILE A 152 MET A 153 0 SHEET 2 B 2 GLU A 180 PHE A 181 -1 O GLU A 180 N MET A 153 SHEET 1 C 2 VAL A 162 ASP A 165 0 SHEET 2 C 2 LYS A 170 LEU A 173 -1 O ARG A 172 N MET A 163 LINK C LEU A 88 N CSO A 89 1555 1555 1.34 LINK C CSO A 89 N GLY A 90 1555 1555 1.33 CISPEP 1 GLU A 230 PRO A 231 0 -4.65 SITE 1 AC1 11 VAL A 45 VAL A 53 ILE A 66 LYS A 68 SITE 2 AC1 11 PHE A 113 VAL A 116 ASN A 118 MET A 163 SITE 3 AC1 11 ILE A 174 ASP A 175 HOH A 508 CRYST1 142.863 59.366 45.485 90.00 103.47 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007000 0.000000 0.001677 0.00000 SCALE2 0.000000 0.016845 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022607 0.00000