HEADER HYDROLASE/HYDROLASE INHIBITOR 26-JAN-12 4DGR TITLE INFLUENZA SUBTYPE 9 NEURAMINIDASE BENZOIC ACID INHIBITOR COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEURAMINIDASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NEURAMINIDASE; COMPND 5 EC: 3.2.1.18 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS SOURCE 3 (A/TERN/AUSTRALIA/G70C/1975(H11N9)); SOURCE 4 ORGANISM_TAXID: 384509; SOURCE 5 STRAIN: H1N9 AVIAN INFLUENZA KEYWDS INHIBITOR COMPLEX, GLYCAN STRUCTURE, NEURAMINIDASE, HYDROLASE- KEYWDS 2 HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR L.VENKATRAMANI,E.JOHNSON,G.KOLAVI,G.M.AIR,W.BROUILLETTE,B.H.M.MOOERS REVDAT 5 13-SEP-23 4DGR 1 REMARK HETSYN REVDAT 4 29-JUL-20 4DGR 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 15-NOV-17 4DGR 1 REMARK REVDAT 2 20-JUN-12 4DGR 1 JRNL REVDAT 1 16-MAY-12 4DGR 0 JRNL AUTH L.VENKATRAMANI,E.S.JOHNSON,G.KOLAVI,G.M.AIR,W.J.BROUILLETTE, JRNL AUTH 2 B.H.MOOERS JRNL TITL CRYSTAL STRUCTURE OF A NEW BENZOIC ACID INHIBITOR OF JRNL TITL 2 INFLUENZA NEURAMINIDASE BOUND WITH A NEW TILT INDUCED BY JRNL TITL 3 OVERPACKING SUB-SITE C6. JRNL REF BMC STRUCT.BIOL. V. 12 7 2012 JRNL REFN ESSN 1472-6807 JRNL PMID 22559154 JRNL DOI 10.1186/1472-6807-12-7 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_943) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 71816 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.123 REMARK 3 R VALUE (WORKING SET) : 0.121 REMARK 3 FREE R VALUE : 0.152 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 3659 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.6186 - 4.5888 1.00 2901 138 0.1650 0.1648 REMARK 3 2 4.5888 - 3.6446 1.00 2727 139 0.1049 0.1286 REMARK 3 3 3.6446 - 3.1846 1.00 2701 141 0.1154 0.1285 REMARK 3 4 3.1846 - 2.8937 0.99 2661 157 0.1138 0.1450 REMARK 3 5 2.8937 - 2.6865 0.99 2656 139 0.1122 0.1247 REMARK 3 6 2.6865 - 2.5282 0.99 2613 134 0.1083 0.1524 REMARK 3 7 2.5282 - 2.4016 0.99 2639 134 0.1039 0.1544 REMARK 3 8 2.4016 - 2.2971 0.98 2616 146 0.0974 0.1244 REMARK 3 9 2.2971 - 2.2087 0.98 2577 141 0.0935 0.1426 REMARK 3 10 2.2087 - 2.1326 0.98 2580 144 0.1010 0.1394 REMARK 3 11 2.1326 - 2.0659 0.98 2604 141 0.1004 0.1275 REMARK 3 12 2.0659 - 2.0069 0.99 2618 130 0.1014 0.1392 REMARK 3 13 2.0069 - 1.9540 0.99 2598 135 0.1133 0.1507 REMARK 3 14 1.9540 - 1.9064 0.99 2610 130 0.1136 0.1782 REMARK 3 15 1.9064 - 1.8630 0.99 2609 137 0.1137 0.1625 REMARK 3 16 1.8630 - 1.8234 0.99 2576 148 0.1205 0.1882 REMARK 3 17 1.8234 - 1.7869 0.99 2564 166 0.1304 0.1809 REMARK 3 18 1.7869 - 1.7532 0.99 2601 138 0.1321 0.1773 REMARK 3 19 1.7532 - 1.7219 0.99 2592 125 0.1442 0.2315 REMARK 3 20 1.7219 - 1.6927 0.99 2604 141 0.1445 0.1849 REMARK 3 21 1.6927 - 1.6654 1.00 2588 153 0.1427 0.2144 REMARK 3 22 1.6654 - 1.6398 0.99 2609 136 0.1534 0.2005 REMARK 3 23 1.6398 - 1.6157 1.00 2568 136 0.1574 0.2469 REMARK 3 24 1.6157 - 1.5929 0.99 2627 154 0.1758 0.2438 REMARK 3 25 1.5929 - 1.5714 0.99 2570 137 0.1948 0.2353 REMARK 3 26 1.5714 - 1.5510 0.97 2548 139 0.2199 0.2988 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.61 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 3494 REMARK 3 ANGLE : 1.334 4748 REMARK 3 CHIRALITY : 0.115 541 REMARK 3 PLANARITY : 0.007 584 REMARK 3 DIHEDRAL : 14.827 1393 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4DGR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000070308. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAY-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : SIDE-SCATTERING CUBEROOT I-BEAM REMARK 200 BENT SINGLE CRYSTAL; ASYMETRIC REMARK 200 CUT 12.2 DEGS. REMARK 200 OPTICS : VERTICAL FOCUSING MIRROR; SINGLE REMARK 200 CRYSTAL SI(311) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 28.614 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 200 DATA REDUNDANCY : 24.70 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : 0.06700 REMARK 200 FOR THE DATA SET : 29.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 17.80 REMARK 200 R MERGE FOR SHELL (I) : 0.76700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLECULAR SUBSTITUTION REMARK 200 STARTING MODEL: 2QWA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.9 M PHOSPHATE BUFFER, PH 6.9, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 Y,X,-Z REMARK 290 14555 -Y,-X,-Z REMARK 290 15555 Y,-X,Z REMARK 290 16555 -Y,X,Z REMARK 290 17555 X,Z,-Y REMARK 290 18555 -X,Z,Y REMARK 290 19555 -X,-Z,-Y REMARK 290 20555 X,-Z,Y REMARK 290 21555 Z,Y,-X REMARK 290 22555 Z,-Y,X REMARK 290 23555 -Z,Y,X REMARK 290 24555 -Z,-Y,-X REMARK 290 25555 X+1/2,Y+1/2,Z+1/2 REMARK 290 26555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 27555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 28555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 29555 Z+1/2,X+1/2,Y+1/2 REMARK 290 30555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 31555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 32555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 33555 Y+1/2,Z+1/2,X+1/2 REMARK 290 34555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 35555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 36555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 37555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 38555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 39555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 40555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 41555 X+1/2,Z+1/2,-Y+1/2 REMARK 290 42555 -X+1/2,Z+1/2,Y+1/2 REMARK 290 43555 -X+1/2,-Z+1/2,-Y+1/2 REMARK 290 44555 X+1/2,-Z+1/2,Y+1/2 REMARK 290 45555 Z+1/2,Y+1/2,-X+1/2 REMARK 290 46555 Z+1/2,-Y+1/2,X+1/2 REMARK 290 47555 -Z+1/2,Y+1/2,X+1/2 REMARK 290 48555 -Z+1/2,-Y+1/2,-X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 25 1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY2 25 0.000000 1.000000 0.000000 90.48450 REMARK 290 SMTRY3 25 0.000000 0.000000 1.000000 90.48450 REMARK 290 SMTRY1 26 -1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY2 26 0.000000 -1.000000 0.000000 90.48450 REMARK 290 SMTRY3 26 0.000000 0.000000 1.000000 90.48450 REMARK 290 SMTRY1 27 -1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY2 27 0.000000 1.000000 0.000000 90.48450 REMARK 290 SMTRY3 27 0.000000 0.000000 -1.000000 90.48450 REMARK 290 SMTRY1 28 1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY2 28 0.000000 -1.000000 0.000000 90.48450 REMARK 290 SMTRY3 28 0.000000 0.000000 -1.000000 90.48450 REMARK 290 SMTRY1 29 0.000000 0.000000 1.000000 90.48450 REMARK 290 SMTRY2 29 1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY3 29 0.000000 1.000000 0.000000 90.48450 REMARK 290 SMTRY1 30 0.000000 0.000000 1.000000 90.48450 REMARK 290 SMTRY2 30 -1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY3 30 0.000000 -1.000000 0.000000 90.48450 REMARK 290 SMTRY1 31 0.000000 0.000000 -1.000000 90.48450 REMARK 290 SMTRY2 31 -1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY3 31 0.000000 1.000000 0.000000 90.48450 REMARK 290 SMTRY1 32 0.000000 0.000000 -1.000000 90.48450 REMARK 290 SMTRY2 32 1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY3 32 0.000000 -1.000000 0.000000 90.48450 REMARK 290 SMTRY1 33 0.000000 1.000000 0.000000 90.48450 REMARK 290 SMTRY2 33 0.000000 0.000000 1.000000 90.48450 REMARK 290 SMTRY3 33 1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY1 34 0.000000 -1.000000 0.000000 90.48450 REMARK 290 SMTRY2 34 0.000000 0.000000 1.000000 90.48450 REMARK 290 SMTRY3 34 -1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY1 35 0.000000 1.000000 0.000000 90.48450 REMARK 290 SMTRY2 35 0.000000 0.000000 -1.000000 90.48450 REMARK 290 SMTRY3 35 -1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY1 36 0.000000 -1.000000 0.000000 90.48450 REMARK 290 SMTRY2 36 0.000000 0.000000 -1.000000 90.48450 REMARK 290 SMTRY3 36 1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY1 37 0.000000 1.000000 0.000000 90.48450 REMARK 290 SMTRY2 37 1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY3 37 0.000000 0.000000 -1.000000 90.48450 REMARK 290 SMTRY1 38 0.000000 -1.000000 0.000000 90.48450 REMARK 290 SMTRY2 38 -1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY3 38 0.000000 0.000000 -1.000000 90.48450 REMARK 290 SMTRY1 39 0.000000 1.000000 0.000000 90.48450 REMARK 290 SMTRY2 39 -1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY3 39 0.000000 0.000000 1.000000 90.48450 REMARK 290 SMTRY1 40 0.000000 -1.000000 0.000000 90.48450 REMARK 290 SMTRY2 40 1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY3 40 0.000000 0.000000 1.000000 90.48450 REMARK 290 SMTRY1 41 1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY2 41 0.000000 0.000000 1.000000 90.48450 REMARK 290 SMTRY3 41 0.000000 -1.000000 0.000000 90.48450 REMARK 290 SMTRY1 42 -1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY2 42 0.000000 0.000000 1.000000 90.48450 REMARK 290 SMTRY3 42 0.000000 1.000000 0.000000 90.48450 REMARK 290 SMTRY1 43 -1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY2 43 0.000000 0.000000 -1.000000 90.48450 REMARK 290 SMTRY3 43 0.000000 -1.000000 0.000000 90.48450 REMARK 290 SMTRY1 44 1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY2 44 0.000000 0.000000 -1.000000 90.48450 REMARK 290 SMTRY3 44 0.000000 1.000000 0.000000 90.48450 REMARK 290 SMTRY1 45 0.000000 0.000000 1.000000 90.48450 REMARK 290 SMTRY2 45 0.000000 1.000000 0.000000 90.48450 REMARK 290 SMTRY3 45 -1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY1 46 0.000000 0.000000 1.000000 90.48450 REMARK 290 SMTRY2 46 0.000000 -1.000000 0.000000 90.48450 REMARK 290 SMTRY3 46 1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY1 47 0.000000 0.000000 -1.000000 90.48450 REMARK 290 SMTRY2 47 0.000000 1.000000 0.000000 90.48450 REMARK 290 SMTRY3 47 1.000000 0.000000 0.000000 90.48450 REMARK 290 SMTRY1 48 0.000000 0.000000 -1.000000 90.48450 REMARK 290 SMTRY2 48 0.000000 -1.000000 0.000000 90.48450 REMARK 290 SMTRY3 48 -1.000000 0.000000 0.000000 90.48450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 46350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 913 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 915 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 81 CG1 CG2 CD1 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 261 CE NZ REMARK 480 LYS A 387 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 96 -175.86 -172.36 REMARK 500 ASP A 111 43.73 -150.46 REMARK 500 GLU A 128 143.42 -170.24 REMARK 500 SER A 164 -4.65 70.51 REMARK 500 ASN A 200 39.31 -156.22 REMARK 500 ASN A 221 80.01 -154.43 REMARK 500 THR A 225 -154.03 -140.56 REMARK 500 ARG A 284 57.80 38.17 REMARK 500 CYS A 291 -168.73 -123.28 REMARK 500 GLN A 315 -159.61 -159.81 REMARK 500 ASP A 356 54.48 -150.66 REMARK 500 SER A 404 -135.91 -114.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 490 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 293 O REMARK 620 2 GLY A 297 O 75.8 REMARK 620 3 ASP A 324 OD2 94.3 89.2 REMARK 620 4 ASN A 347 O 99.3 163.8 106.7 REMARK 620 5 HOH A 521 O 159.1 85.6 94.8 96.1 REMARK 620 6 HOH A 529 O 88.1 91.8 177.6 72.5 83.1 REMARK 620 N 1 2 3 4 5 DBREF 4DGR A 81 468 UNP P03472 NRAM_I75A5 82 470 SEQRES 1 A 389 ILE ARG ASP PHE ASN ASN LEU THR LYS GLY LEU CYS THR SEQRES 2 A 389 ILE ASN SER TRP HIS ILE TYR GLY LYS ASP ASN ALA VAL SEQRES 3 A 389 ARG ILE GLY GLU ASP SER ASP VAL LEU VAL THR ARG GLU SEQRES 4 A 389 PRO TYR VAL SER CYS ASP PRO ASP GLU CYS ARG PHE TYR SEQRES 5 A 389 ALA LEU SER GLN GLY THR THR ILE ARG GLY LYS HIS SER SEQRES 6 A 389 ASN GLY THR ILE HIS ASP ARG SER GLN TYR ARG ALA LEU SEQRES 7 A 389 ILE SER TRP PRO LEU SER SER PRO PRO THR VAL TYR ASN SEQRES 8 A 389 SER ARG VAL GLU CYS ILE GLY TRP SER SER THR SER CYS SEQRES 9 A 389 HIS ASP GLY LYS THR ARG MET SER ILE CYS ILE SER GLY SEQRES 10 A 389 PRO ASN ASN ASN ALA SER ALA VAL ILE TRP TYR ASN ARG SEQRES 11 A 389 ARG PRO VAL THR GLU ILE ASN THR TRP ALA ARG ASN ILE SEQRES 12 A 389 LEU ARG THR GLN GLU SER GLU CYS VAL CYS HIS ASN GLY SEQRES 13 A 389 VAL CYS PRO VAL VAL PHE THR ASP GLY SER ALA THR GLY SEQRES 14 A 389 PRO ALA GLU THR ARG ILE TYR TYR PHE LYS GLU GLY LYS SEQRES 15 A 389 ILE LEU LYS TRP GLU PRO LEU ALA GLY THR ALA LYS HIS SEQRES 16 A 389 ILE GLU GLU CYS SER CYS TYR GLY GLU ARG ALA GLU ILE SEQRES 17 A 389 THR CYS THR CYS ARG ASP ASN TRP GLN GLY SER ASN ARG SEQRES 18 A 389 PRO VAL ILE ARG ILE ASP PRO VAL ALA MET THR HIS THR SEQRES 19 A 389 SER GLN TYR ILE CYS SER PRO VAL LEU THR ASP ASN PRO SEQRES 20 A 389 ARG PRO ASN ASP PRO THR VAL GLY LYS CYS ASN ASP PRO SEQRES 21 A 389 TYR PRO GLY ASN ASN ASN ASN GLY VAL LYS GLY PHE SER SEQRES 22 A 389 TYR LEU ASP GLY VAL ASN THR TRP LEU GLY ARG THR ILE SEQRES 23 A 389 SER ILE ALA SER ARG SER GLY TYR GLU MET LEU LYS VAL SEQRES 24 A 389 PRO ASN ALA LEU THR ASP ASP LYS SER LYS PRO THR GLN SEQRES 25 A 389 GLY GLN THR ILE VAL LEU ASN THR ASP TRP SER GLY TYR SEQRES 26 A 389 SER GLY SER PHE MET ASP TYR TRP ALA GLU GLY GLU CYS SEQRES 27 A 389 TYR ARG ALA CYS PHE TYR VAL GLU LEU ILE ARG GLY ARG SEQRES 28 A 389 PRO LYS GLU ASP LYS VAL TRP TRP THR SER ASN SER ILE SEQRES 29 A 389 VAL SER MET CYS SER SER THR GLU PHE LEU GLY GLN TRP SEQRES 30 A 389 ASP TRP PRO ASP GLY ALA LYS ILE GLU TYR PHE LEU MODRES 4DGR ASN A 146 ASN GLYCOSYLATION SITE MODRES 4DGR ASN A 86 ASN GLYCOSYLATION SITE MODRES 4DGR ASN A 200 ASN GLYCOSYLATION SITE HET NAG B 1 26 HET NAG B 2 26 HET BMA B 3 19 HET MAN B 4 20 HET MAN B 5 20 HET MAN B 6 21 HET MAN B 7 19 HET MAN B 8 21 HET MAN B 9 21 HET NAG C 1 26 HET NAG C 2 27 HET NAG D 1 26 HET NAG D 2 26 HET BMA D 3 20 HET BGC A 484 12 HET GLC A 485 24 HET BGC A 486 12 HET BGC A 487 12 HET 3LV A 488 56 HET PO4 A 489 5 HET CA A 490 1 HET CA A 491 1 HET K A 492 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM 3LV 4-[2,2-BIS(HYDROXYMETHYL)-5-OXOPYRROLIDIN-1-YL]-3- HETNAM 2 3LV [(DIPROPYLAMINO)METHYL]BENZOIC ACID HETNAM PO4 PHOSPHATE ION HETNAM CA CALCIUM ION HETNAM K POTASSIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 2 NAG 6(C8 H15 N O6) FORMUL 2 BMA 2(C6 H12 O6) FORMUL 2 MAN 6(C6 H12 O6) FORMUL 5 BGC 3(C6 H12 O6) FORMUL 6 GLC C6 H12 O6 FORMUL 9 3LV C20 H30 N2 O5 FORMUL 10 PO4 O4 P 3- FORMUL 11 CA 2(CA 2+) FORMUL 13 K K 1+ FORMUL 14 HOH *448(H2 O) HELIX 1 1 ASN A 104 GLU A 110 1 7 HELIX 2 2 GLY A 142 ASN A 146 5 5 HELIX 3 3 LYS A 463 LEU A 468 5 6 SHEET 1 A 2 GLY A 90 LEU A 91 0 SHEET 2 A 2 CYS A 417 TYR A 418 1 O TYR A 418 N GLY A 90 SHEET 1 B 4 SER A 96 LYS A 102 0 SHEET 2 B 4 THR A 439 SER A 449 -1 O CYS A 447 N HIS A 98 SHEET 3 B 4 CYS A 421 GLY A 429 -1 N VAL A 424 O VAL A 444 SHEET 4 B 4 SER A 407 PHE A 410 -1 N GLY A 408 O TYR A 423 SHEET 1 C 4 LEU A 115 ASP A 125 0 SHEET 2 C 4 GLU A 128 THR A 139 -1 O GLU A 128 N ASP A 125 SHEET 3 C 4 ALA A 157 PRO A 162 -1 O ILE A 159 N ALA A 133 SHEET 4 C 4 ARG A 172 ILE A 176 -1 O ARG A 172 N SER A 160 SHEET 1 D 4 SER A 179 HIS A 184 0 SHEET 2 D 4 ARG A 189 SER A 195 -1 O MET A 190 N CYS A 183 SHEET 3 D 4 SER A 202 TYR A 207 -1 O TRP A 206 N SER A 191 SHEET 4 D 4 ARG A 210 ASN A 216 -1 O THR A 213 N ILE A 205 SHEET 1 E 3 CYS A 237 GLY A 244 0 SHEET 2 E 3 ALA A 250 LYS A 258 -1 O PHE A 257 N CYS A 237 SHEET 3 E 3 LYS A 261 PRO A 267 -1 O LEU A 263 N TYR A 256 SHEET 1 F 4 GLU A 276 GLU A 283 0 SHEET 2 F 4 GLU A 286 ARG A 292 -1 O THR A 288 N TYR A 281 SHEET 3 F 4 PRO A 301 ASP A 306 -1 O ILE A 305 N ILE A 287 SHEET 4 F 4 THR A 311 TYR A 316 -1 O GLN A 315 N VAL A 302 SHEET 1 G 4 SER A 353 TYR A 354 0 SHEET 2 G 4 TRP A 361 ARG A 364 -1 O TRP A 361 N TYR A 354 SHEET 3 G 4 SER A 372 LYS A 378 -1 O LEU A 377 N LEU A 362 SHEET 4 G 4 GLN A 392 TRP A 403 -1 O GLN A 395 N MET A 376 SSBOND 1 CYS A 92 CYS A 417 1555 1555 2.06 SSBOND 2 CYS A 124 CYS A 129 1555 1555 2.08 SSBOND 3 CYS A 175 CYS A 193 1555 1555 2.07 SSBOND 4 CYS A 183 CYS A 230 1555 1555 2.03 SSBOND 5 CYS A 232 CYS A 237 1555 1555 2.04 SSBOND 6 CYS A 278 CYS A 291 1555 1555 2.12 SSBOND 7 CYS A 280 CYS A 289 1555 1555 2.07 SSBOND 8 CYS A 318 CYS A 337 1555 1555 2.05 SSBOND 9 CYS A 421 CYS A 447 1555 1555 2.08 LINK ND2 ASN A 86 C1 NAG C 1 1555 1555 1.43 LINK ND2 ASN A 146 C1 NAG D 1 1555 1555 1.42 LINK ND2 ASN A 200 C1 NAG B 1 1555 1555 1.43 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.45 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.42 LINK O3 BMA B 3 C1 MAN B 4 1555 1555 1.36 LINK O6 BMA B 3 C1 MAN B 7 1555 1555 1.43 LINK O2 MAN B 4 C1 MAN B 5 1555 1555 1.40 LINK O2 MAN B 5 C1 MAN B 6 1555 1555 1.46 LINK O3 MAN B 7 C1 MAN B 8 1555 1555 1.44 LINK O6 MAN B 7 C1 MAN B 9 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.41 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.43 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.43 LINK O ASP A 293 CA CA A 490 1555 1555 2.53 LINK O GLY A 297 CA CA A 490 1555 1555 2.55 LINK OD2 ASP A 324 CA CA A 490 1555 1555 2.61 LINK O ASN A 347 CA CA A 490 1555 1555 2.64 LINK CA CA A 490 O HOH A 521 1555 1555 2.57 LINK CA CA A 490 O HOH A 529 1555 1555 2.67 LINK CA CA A 491 O HOH A 618 1555 1555 2.38 CISPEP 1 ASN A 325 PRO A 326 0 -6.70 CISPEP 2 ARG A 430 PRO A 431 0 3.82 CRYST1 180.969 180.969 180.969 90.00 90.00 90.00 I 4 3 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005526 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005526 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005526 0.00000