HEADER LIGASE 31-JAN-12 4DIM
TITLE CRYSTAL STRUCTURE OF PHOSPHORIBOSYLGLYCINAMIDE SYNTHETASE FROM
TITLE 2 ANAEROCOCCUS PREVOTII
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: PHOSPHORIBOSYLGLYCINAMIDE SYNTHETASE;
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: ANAEROCOCCUS PREVOTII;
SOURCE 3 ORGANISM_COMMON: PEPTOSTREPTOCOCCUS PREVOTII;
SOURCE 4 ORGANISM_TAXID: 525919;
SOURCE 5 STRAIN: DSM 20548;
SOURCE 6 GENE: APRE_1268;
SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) MAGIC;
SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG19
KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL
KEYWDS 2 GENOMICS, MCSG, LIGASE
EXPDTA X-RAY DIFFRACTION
AUTHOR K.MICHALSKA,R.WU,S.CLANCY,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL
AUTHOR 2 GENOMICS (MCSG)
REVDAT 2 16-OCT-24 4DIM 1 SEQADV LINK
REVDAT 1 29-FEB-12 4DIM 0
JRNL AUTH K.MICHALSKA,R.WU,S.CLANCY,A.JOACHIMIAK,
JRNL AUTH 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG)
JRNL TITL CRYSTAL STRUCTURE OF PHOSPHORIBOSYLGLYCINAMIDE SYNTHETASE
JRNL TITL 2 FROM ANAEROCOCCUS PREVOTII
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. 2.61 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : BUSTER 2.10.0
REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,
REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,
REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.80
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8
REMARK 3 NUMBER OF REFLECTIONS : 15514
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.187
REMARK 3 R VALUE (WORKING SET) : 0.184
REMARK 3 FREE R VALUE : 0.228
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.810
REMARK 3 FREE R VALUE TEST SET COUNT : 901
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 8
REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61
REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.79
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.77
REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2793
REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2198
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2628
REMARK 3 BIN R VALUE (WORKING SET) : 0.2143
REMARK 3 BIN FREE R VALUE : 0.3039
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.91
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 165
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 3091
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 0
REMARK 3 SOLVENT ATOMS : 2
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 100.0
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 104.6
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -10.29440
REMARK 3 B22 (A**2) : -12.78480
REMARK 3 B33 (A**2) : 23.07920
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 9.90540
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.484
REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL
REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL
REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL
REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL
REMARK 3
REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797
REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934
REMARK 3
REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15
REMARK 3 TERM COUNT WEIGHT FUNCTION.
REMARK 3 BOND LENGTHS : 6263 ; 2.000 ; HARMONIC
REMARK 3 BOND ANGLES : 11399 ; 2.000 ; HARMONIC
REMARK 3 TORSION ANGLES : 1827 ; 2.000 ; SINUSOIDAL
REMARK 3 TRIGONAL CARBON PLANES : 103 ; 2.000 ; HARMONIC
REMARK 3 GENERAL PLANES : 875 ; 5.000 ; HARMONIC
REMARK 3 ISOTROPIC THERMAL FACTORS : 6263 ; 20.000 ; HARMONIC
REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL
REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL
REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL
REMARK 3 CHIRAL IMPROPER TORSION : 426 ; 5.000 ; SEMIHARMONIC
REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL
REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL
REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL
REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL
REMARK 3 IDEAL-DIST CONTACT TERM : 6614 ; 4.000 ; SEMIHARMONIC
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.012
REMARK 3 BOND ANGLES (DEGREES) : 1.23
REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.61
REMARK 3 OTHER TORSION ANGLES (DEGREES) : 3.41
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 7
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: {A|3 - 107}
REMARK 3 ORIGIN FOR THE GROUP (A): 6.3364 3.3089 30.2027
REMARK 3 T TENSOR
REMARK 3 T11: 0.0197 T22: -0.1911
REMARK 3 T33: -0.0425 T12: 0.0371
REMARK 3 T13: -0.1509 T23: 0.0723
REMARK 3 L TENSOR
REMARK 3 L11: 5.5976 L22: 1.0597
REMARK 3 L33: 4.2523 L12: 0.8570
REMARK 3 L13: 1.4153 L23: 0.3155
REMARK 3 S TENSOR
REMARK 3 S11: -0.1566 S12: 0.6346 S13: 0.5003
REMARK 3 S21: -0.4008 S22: 0.0737 S23: 0.4668
REMARK 3 S31: -0.5280 S32: -0.4355 S33: 0.0829
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: {A|108 - 146}
REMARK 3 ORIGIN FOR THE GROUP (A): 41.7124 1.7868 32.8631
REMARK 3 T TENSOR
REMARK 3 T11: -0.0406 T22: 0.3040
REMARK 3 T33: -0.3085 T12: -0.1518
REMARK 3 T13: 0.0124 T23: -0.0150
REMARK 3 L TENSOR
REMARK 3 L11: 6.1484 L22: 2.4054
REMARK 3 L33: 4.6298 L12: -0.7483
REMARK 3 L13: -2.8264 L23: 2.8211
REMARK 3 S TENSOR
REMARK 3 S11: 0.0533 S12: 0.3050 S13: 0.5561
REMARK 3 S21: 0.3573 S22: -0.0452 S23: -0.1232
REMARK 3 S31: -0.5324 S32: 0.6103 S33: -0.0081
REMARK 3
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: {A|147 - 176}
REMARK 3 ORIGIN FOR THE GROUP (A): 44.3704 -11.1030 26.4582
REMARK 3 T TENSOR
REMARK 3 T11: -0.3013 T22: 0.3040
REMARK 3 T33: -0.2585 T12: 0.1683
REMARK 3 T13: 0.1225 T23: -0.0735
REMARK 3 L TENSOR
REMARK 3 L11: 7.0975 L22: 8.3154
REMARK 3 L33: 7.3023 L12: 3.3027
REMARK 3 L13: -2.1947 L23: -1.9339
REMARK 3 S TENSOR
REMARK 3 S11: -0.0542 S12: 0.2338 S13: -0.3809
REMARK 3 S21: -0.4208 S22: -0.0924 S23: 0.1547
REMARK 3 S31: 0.3436 S32: 0.2895 S33: 0.1465
REMARK 3
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: {A|177 - 215}
REMARK 3 ORIGIN FOR THE GROUP (A): 27.1605 -2.0001 39.6225
REMARK 3 T TENSOR
REMARK 3 T11: -0.0649 T22: -0.1353
REMARK 3 T33: -0.2765 T12: -0.0105
REMARK 3 T13: -0.0087 T23: 0.0128
REMARK 3 L TENSOR
REMARK 3 L11: 4.3257 L22: 0.8596
REMARK 3 L33: 4.0222 L12: 0.0426
REMARK 3 L13: -1.1804 L23: 0.8966
REMARK 3 S TENSOR
REMARK 3 S11: -0.0706 S12: 0.0535 S13: 0.0691
REMARK 3 S21: -0.3567 S22: -0.1765 S23: 0.0800
REMARK 3 S31: -0.4393 S32: 0.5635 S33: 0.2471
REMARK 3
REMARK 3 TLS GROUP : 5
REMARK 3 SELECTION: {A|216 - 324}
REMARK 3 ORIGIN FOR THE GROUP (A): 18.8939 -0.8709 47.1736
REMARK 3 T TENSOR
REMARK 3 T11: -0.0245 T22: -0.1452
REMARK 3 T33: -0.1825 T12: 0.0198
REMARK 3 T13: 0.0037 T23: -0.0645
REMARK 3 L TENSOR
REMARK 3 L11: 5.2934 L22: 1.7802
REMARK 3 L33: 4.4073 L12: 1.1891
REMARK 3 L13: -0.1997 L23: -0.3123
REMARK 3 S TENSOR
REMARK 3 S11: -0.0792 S12: -0.5262 S13: 0.3233
REMARK 3 S21: -0.0177 S22: -0.0414 S23: 0.1445
REMARK 3 S31: -0.2479 S32: 0.2801 S33: 0.1207
REMARK 3
REMARK 3 TLS GROUP : 6
REMARK 3 SELECTION: {A|325 - 347}
REMARK 3 ORIGIN FOR THE GROUP (A): 5.5926 -26.1333 42.7835
REMARK 3 T TENSOR
REMARK 3 T11: 0.0448 T22: -0.1914
REMARK 3 T33: 0.1263 T12: -0.0753
REMARK 3 T13: -0.0615 T23: -0.0345
REMARK 3 L TENSOR
REMARK 3 L11: 5.7430 L22: 5.2020
REMARK 3 L33: 2.0603 L12: 2.6656
REMARK 3 L13: 3.2023 L23: 1.5841
REMARK 3 S TENSOR
REMARK 3 S11: 0.0516 S12: 0.0984 S13: -0.2821
REMARK 3 S21: -0.5615 S22: 0.0789 S23: 0.3422
REMARK 3 S31: 0.3138 S32: -0.3871 S33: -0.1306
REMARK 3
REMARK 3 TLS GROUP : 7
REMARK 3 SELECTION: {A|348 - 400}
REMARK 3 ORIGIN FOR THE GROUP (A): 9.0271 -21.5491 44.7143
REMARK 3 T TENSOR
REMARK 3 T11: -0.1050 T22: -0.2454
REMARK 3 T33: -0.0625 T12: 0.0541
REMARK 3 T13: 0.0038 T23: 0.0559
REMARK 3 L TENSOR
REMARK 3 L11: 4.9115 L22: 8.3154
REMARK 3 L33: 3.6126 L12: 2.2628
REMARK 3 L13: 1.2273 L23: 1.1680
REMARK 3 S TENSOR
REMARK 3 S11: -0.2102 S12: 0.1826 S13: -0.4714
REMARK 3 S21: -0.6303 S22: 0.0381 S23: 0.4363
REMARK 3 S31: 0.4141 S32: 0.1507 S33: 0.1721
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 4DIM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-FEB-12.
REMARK 100 THE DEPOSITION ID IS D_1000070375.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 19-DEC-11
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 6.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : APS
REMARK 200 BEAMLINE : 19-ID
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.97904
REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL
REMARK 200 OPTICS : MIRRORS
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000
REMARK 200 DATA SCALING SOFTWARE : HKL-3000
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15567
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8
REMARK 200 DATA REDUNDANCY : 5.800
REMARK 200 R MERGE (I) : 0.08900
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 24.4000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64
REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0
REMARK 200 DATA REDUNDANCY IN SHELL : 3.70
REMARK 200 R MERGE FOR SHELL (I) : 0.59900
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.350
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD
REMARK 200 SOFTWARE USED: AUTO-RICKSHAW, SHELX, MLPHARE, DM
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 56.36
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS/HCL, 20% PEG MME 5000,
REMARK 280 PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 297K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y,-Z
REMARK 290 3555 X+1/2,Y+1/2,Z
REMARK 290 4555 -X+1/2,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 62.63500
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.23350
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 62.63500
REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 42.23350
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 SER A -2
REMARK 465 ASN A -1
REMARK 465 ALA A 0
REMARK 465 MSE A 1
REMARK 465 TYR A 2
REMARK 465 GLN A 152
REMARK 465 GLY A 153
REMARK 465 SER A 154
REMARK 465 LYS A 155
REMARK 465 GLY A 156
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASN A 4 74.71 68.28
REMARK 500 ALA A 12 48.46 -146.90
REMARK 500 SER A 217 -68.83 -133.66
REMARK 500 GLU A 365 -41.19 -136.38
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: MCSG-APC101077 RELATED DB: TARGETTRACK
DBREF 4DIM A 1 400 UNP C7RDM8 C7RDM8_ANAPD 1 400
SEQADV 4DIM SER A -2 UNP C7RDM8 EXPRESSION TAG
SEQADV 4DIM ASN A -1 UNP C7RDM8 EXPRESSION TAG
SEQADV 4DIM ALA A 0 UNP C7RDM8 EXPRESSION TAG
SEQRES 1 A 403 SER ASN ALA MSE TYR ASP ASN LYS ARG LEU LEU ILE LEU
SEQRES 2 A 403 GLY ALA GLY ARG GLY GLN LEU GLY LEU TYR LYS ALA ALA
SEQRES 3 A 403 LYS GLU LEU GLY ILE HIS THR ILE ALA GLY THR MSE PRO
SEQRES 4 A 403 ASN ALA HIS LYS PRO CYS LEU ASN LEU ALA ASP GLU ILE
SEQRES 5 A 403 SER TYR MSE ASP ILE SER ASN PRO ASP GLU VAL GLU GLN
SEQRES 6 A 403 LYS VAL LYS ASP LEU ASN LEU ASP GLY ALA ALA THR CYS
SEQRES 7 A 403 CYS LEU ASP THR GLY ILE VAL SER LEU ALA ARG ILE CYS
SEQRES 8 A 403 ASP LYS GLU ASN LEU VAL GLY LEU ASN GLU GLU ALA ALA
SEQRES 9 A 403 ILE MSE CYS GLY ASP LYS TYR LYS MSE LYS GLU ALA PHE
SEQRES 10 A 403 LYS LYS TYR ASN VAL ASN THR ALA ARG HIS PHE VAL VAL
SEQRES 11 A 403 ARG ASN GLU ASN GLU LEU LYS ASN ALA LEU GLU ASN LEU
SEQRES 12 A 403 LYS LEU PRO VAL ILE VAL LYS ALA THR ASP LEU GLN GLY
SEQRES 13 A 403 SER LYS GLY ILE TYR ILE ALA LYS LYS GLU GLU GLU ALA
SEQRES 14 A 403 ILE ASP GLY PHE ASN GLU THR MSE ASN LEU THR LYS ARG
SEQRES 15 A 403 ASP TYR CYS ILE VAL GLU GLU PHE ILE GLU GLY TYR GLU
SEQRES 16 A 403 PHE GLY ALA GLN ALA PHE VAL TYR LYS ASN ASP VAL LEU
SEQRES 17 A 403 PHE VAL MSE PRO HIS GLY ASP GLU THR TYR MSE SER HIS
SEQRES 18 A 403 THR ALA VAL PRO VAL GLY HIS TYR VAL PRO LEU ASP VAL
SEQRES 19 A 403 LYS ASP ASP ILE ILE GLU LYS THR LYS THR GLU VAL LYS
SEQRES 20 A 403 LYS ALA ILE LYS ALA LEU GLY LEU ASN ASN CYS ALA VAL
SEQRES 21 A 403 ASN VAL ASP MSE ILE LEU LYS ASP ASN GLU VAL TYR ILE
SEQRES 22 A 403 ILE GLU LEU THR GLY ARG VAL GLY ALA ASN CYS LEU PRO
SEQRES 23 A 403 GLU LEU VAL GLU ILE ASN TYR GLY ILE GLU TYR TYR LYS
SEQRES 24 A 403 MSE ILE ALA SER MSE ALA ILE SER GLU ASN PRO LEU VAL
SEQRES 25 A 403 PHE TRP SER GLN LYS SER LYS GLU ASN LYS ALA GLY LEU
SEQRES 26 A 403 ALA ARG MSE ILE ILE GLU THR GLU LYS SER GLY ILE LEU
SEQRES 27 A 403 LYS GLU ILE LEU ASN SER ASN ALA LYS ASP ASP ASP ILE
SEQRES 28 A 403 VAL GLU ILE THR PHE PHE LYS GLU GLU ASN ASP GLU ILE
SEQRES 29 A 403 LYS LYS PHE GLU ASN SER ASN ASP CYS ILE GLY GLN ILE
SEQRES 30 A 403 ILE VAL LYS GLU GLU THR LEU ASP LYS CYS LYS ASP LYS
SEQRES 31 A 403 LEU ASP VAL ILE ILE ASN ASN ILE ASN ILE ILE LEU LYS
MODRES 4DIM MSE A 35 MET SELENOMETHIONINE
MODRES 4DIM MSE A 52 MET SELENOMETHIONINE
MODRES 4DIM MSE A 103 MET SELENOMETHIONINE
MODRES 4DIM MSE A 110 MET SELENOMETHIONINE
MODRES 4DIM MSE A 174 MET SELENOMETHIONINE
MODRES 4DIM MSE A 208 MET SELENOMETHIONINE
MODRES 4DIM MSE A 216 MET SELENOMETHIONINE
MODRES 4DIM MSE A 261 MET SELENOMETHIONINE
MODRES 4DIM MSE A 297 MET SELENOMETHIONINE
MODRES 4DIM MSE A 301 MET SELENOMETHIONINE
MODRES 4DIM MSE A 325 MET SELENOMETHIONINE
HET MSE A 35 8
HET MSE A 52 8
HET MSE A 103 8
HET MSE A 110 8
HET MSE A 174 8
HET MSE A 208 8
HET MSE A 216 8
HET MSE A 261 8
HET MSE A 297 8
HET MSE A 301 8
HET MSE A 325 8
HETNAM MSE SELENOMETHIONINE
FORMUL 1 MSE 11(C5 H11 N O2 SE)
FORMUL 2 HOH *2(H2 O)
HELIX 1 1 GLY A 13 GLY A 15 5 3
HELIX 2 2 GLN A 16 GLY A 27 1 12
HELIX 3 3 HIS A 39 ALA A 46 1 8
HELIX 4 4 ASN A 56 VAL A 64 1 9
HELIX 5 5 GLY A 80 ASN A 92 1 13
HELIX 6 6 ASN A 97 ASP A 106 1 10
HELIX 7 7 ASP A 106 ASN A 118 1 13
HELIX 8 8 ASN A 129 ASN A 139 1 11
HELIX 9 9 LYS A 162 THR A 177 1 16
HELIX 10 10 LYS A 232 GLY A 251 1 20
HELIX 11 11 CYS A 281 GLY A 291 1 11
HELIX 12 12 GLU A 293 ILE A 303 1 11
HELIX 13 13 PRO A 307 SER A 312 1 6
HELIX 14 14 ASN A 366 CYS A 370 5 5
HELIX 15 15 THR A 380 ASN A 393 1 14
SHEET 1 A 4 GLU A 48 TYR A 51 0
SHEET 2 A 4 HIS A 29 THR A 34 1 N ALA A 32 O SER A 50
SHEET 3 A 4 ARG A 6 LEU A 10 1 N ILE A 9 O ILE A 31
SHEET 4 A 4 GLY A 71 ALA A 73 1 O ALA A 73 N LEU A 10
SHEET 1 B 4 HIS A 124 PHE A 125 0
SHEET 2 B 4 ILE A 183 GLU A 186 -1 O VAL A 184 N PHE A 125
SHEET 3 B 4 VAL A 144 LYS A 147 -1 N ILE A 145 O GLU A 185
SHEET 4 B 4 TYR A 158 ALA A 160 -1 O ALA A 160 N VAL A 144
SHEET 1 C 8 GLU A 267 THR A 274 0
SHEET 2 C 8 CYS A 255 LYS A 264 -1 N LYS A 264 O GLU A 267
SHEET 3 C 8 TYR A 191 TYR A 200 -1 N TYR A 191 O LEU A 263
SHEET 4 C 8 ASP A 203 MSE A 216 -1 O MSE A 208 N GLN A 196
SHEET 5 C 8 ALA A 220 VAL A 227 -1 O VAL A 221 N TYR A 215
SHEET 6 C 8 ALA A 320 ILE A 326 -1 O ALA A 323 N HIS A 225
SHEET 7 C 8 GLY A 372 GLU A 378 -1 O VAL A 376 N LEU A 322
SHEET 8 C 8 ILE A 348 PHE A 353 -1 N GLU A 350 O ILE A 375
SHEET 1 D 3 GLU A 360 ILE A 361 0
SHEET 2 D 3 GLY A 333 ASN A 340 -1 N GLY A 333 O ILE A 361
SHEET 3 D 3 ILE A 395 LEU A 399 -1 O ASN A 396 N LEU A 339
LINK C THR A 34 N MSE A 35 1555 1555 1.33
LINK C MSE A 35 N PRO A 36 1555 1555 1.35
LINK C TYR A 51 N MSE A 52 1555 1555 1.34
LINK C MSE A 52 N ASP A 53 1555 1555 1.34
LINK C ILE A 102 N MSE A 103 1555 1555 1.33
LINK C MSE A 103 N CYS A 104 1555 1555 1.34
LINK C LYS A 109 N MSE A 110 1555 1555 1.35
LINK C MSE A 110 N LYS A 111 1555 1555 1.32
LINK C THR A 173 N MSE A 174 1555 1555 1.35
LINK C MSE A 174 N ASN A 175 1555 1555 1.34
LINK C VAL A 207 N MSE A 208 1555 1555 1.34
LINK C MSE A 208 N PRO A 209 1555 1555 1.35
LINK C TYR A 215 N MSE A 216 1555 1555 1.35
LINK C MSE A 216 N SER A 217 1555 1555 1.35
LINK C ASP A 260 N MSE A 261 1555 1555 1.32
LINK C MSE A 261 N ILE A 262 1555 1555 1.31
LINK C LYS A 296 N MSE A 297 1555 1555 1.34
LINK C MSE A 297 N ILE A 298 1555 1555 1.35
LINK C SER A 300 N MSE A 301 1555 1555 1.35
LINK C MSE A 301 N ALA A 302 1555 1555 1.36
LINK C ARG A 324 N MSE A 325 1555 1555 1.35
LINK C MSE A 325 N ILE A 326 1555 1555 1.35
CISPEP 1 LEU A 142 PRO A 143 0 -7.38
CISPEP 2 VAL A 227 PRO A 228 0 0.15
CRYST1 125.270 84.467 49.642 90.00 100.54 90.00 C 1 2 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.007983 0.000000 0.001485 0.00000
SCALE2 0.000000 0.011839 0.000000 0.00000
SCALE3 0.000000 0.000000 0.020490 0.00000