data_4DK3 # _entry.id 4DK3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4DK3 RCSB RCSB070428 WWPDB D_1000070428 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4DK6 . unspecified PDB 4DKA . unspecified # _pdbx_database_status.entry_id 4DK3 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-02-03 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Park, Y.-J.' 1 'Hol, W.' 2 # _citation.id primary _citation.title ;The structure of the C-terminal domain of the largest editosome interaction protein and its role in promoting RNA binding by RNA-editing ligase L2. ; _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 40 _citation.page_first 6966 _citation.page_last 6977 _citation.year 2012 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22561373 _citation.pdbx_database_id_DOI 10.1093/nar/gks369 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Park, Y.J.' 1 primary 'Budiarto, T.' 2 primary 'Wu, M.' 3 primary 'Pardon, E.' 4 primary 'Steyaert, J.' 5 primary 'Hol, W.G.' 6 # _cell.entry_id 4DK3 _cell.length_a 95.790 _cell.length_b 105.310 _cell.length_c 94.032 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4DK3 _symmetry.space_group_name_H-M 'C 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'single domain antibody VHH' 14769.310 2 ? ? ? ? 2 polymer man 'RNA-editing complex protein MP81' 11439.330 2 ? 'deletion mutant' ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;QVQLQESGGGLVQAGGSLRLSCAASGRTSSLYSMGWFRQAPGKEREFVAAISRNGANTYYTDSVKGRFTISRDNAKNTVE LQMNSLKPEDTAVYYCAADRFPTMEVVTIMTNEYDYWGQGTQVTVSSHHHHHH ; ;QVQLQESGGGLVQAGGSLRLSCAASGRTSSLYSMGWFRQAPGKEREFVAAISRNGANTYYTDSVKGRFTISRDNAKNTVE LQMNSLKPEDTAVYYCAADRFPTMEVVTIMTNEYDYWGQGTQVTVSSHHHHHH ; A,B ? 2 'polypeptide(L)' no no ;RAGSNALMIGRIADVQHGFLGAMTVTQYVLEVDGGASGEKEFIVIRCMGDNFPASLLKDQVKLGSRVLVQGTLRMNRHVD DVSKRLHAYPFIQVVPPLGYVKVVG ; ;RAGSNALMIGRIADVQHGFLGAMTVTQYVLEVDGGASGEKEFIVIRCMGDNFPASLLKDQVKLGSRVLVQGTLRMNRHVD DVSKRLHAYPFIQVVPPLGYVKVVG ; C,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 VAL n 1 3 GLN n 1 4 LEU n 1 5 GLN n 1 6 GLU n 1 7 SER n 1 8 GLY n 1 9 GLY n 1 10 GLY n 1 11 LEU n 1 12 VAL n 1 13 GLN n 1 14 ALA n 1 15 GLY n 1 16 GLY n 1 17 SER n 1 18 LEU n 1 19 ARG n 1 20 LEU n 1 21 SER n 1 22 CYS n 1 23 ALA n 1 24 ALA n 1 25 SER n 1 26 GLY n 1 27 ARG n 1 28 THR n 1 29 SER n 1 30 SER n 1 31 LEU n 1 32 TYR n 1 33 SER n 1 34 MET n 1 35 GLY n 1 36 TRP n 1 37 PHE n 1 38 ARG n 1 39 GLN n 1 40 ALA n 1 41 PRO n 1 42 GLY n 1 43 LYS n 1 44 GLU n 1 45 ARG n 1 46 GLU n 1 47 PHE n 1 48 VAL n 1 49 ALA n 1 50 ALA n 1 51 ILE n 1 52 SER n 1 53 ARG n 1 54 ASN n 1 55 GLY n 1 56 ALA n 1 57 ASN n 1 58 THR n 1 59 TYR n 1 60 TYR n 1 61 THR n 1 62 ASP n 1 63 SER n 1 64 VAL n 1 65 LYS n 1 66 GLY n 1 67 ARG n 1 68 PHE n 1 69 THR n 1 70 ILE n 1 71 SER n 1 72 ARG n 1 73 ASP n 1 74 ASN n 1 75 ALA n 1 76 LYS n 1 77 ASN n 1 78 THR n 1 79 VAL n 1 80 GLU n 1 81 LEU n 1 82 GLN n 1 83 MET n 1 84 ASN n 1 85 SER n 1 86 LEU n 1 87 LYS n 1 88 PRO n 1 89 GLU n 1 90 ASP n 1 91 THR n 1 92 ALA n 1 93 VAL n 1 94 TYR n 1 95 TYR n 1 96 CYS n 1 97 ALA n 1 98 ALA n 1 99 ASP n 1 100 ARG n 1 101 PHE n 1 102 PRO n 1 103 THR n 1 104 MET n 1 105 GLU n 1 106 VAL n 1 107 VAL n 1 108 THR n 1 109 ILE n 1 110 MET n 1 111 THR n 1 112 ASN n 1 113 GLU n 1 114 TYR n 1 115 ASP n 1 116 TYR n 1 117 TRP n 1 118 GLY n 1 119 GLN n 1 120 GLY n 1 121 THR n 1 122 GLN n 1 123 VAL n 1 124 THR n 1 125 VAL n 1 126 SER n 1 127 SER n 1 128 HIS n 1 129 HIS n 1 130 HIS n 1 131 HIS n 1 132 HIS n 1 133 HIS n 2 1 ARG n 2 2 ALA n 2 3 GLY n 2 4 SER n 2 5 ASN n 2 6 ALA n 2 7 LEU n 2 8 MET n 2 9 ILE n 2 10 GLY n 2 11 ARG n 2 12 ILE n 2 13 ALA n 2 14 ASP n 2 15 VAL n 2 16 GLN n 2 17 HIS n 2 18 GLY n 2 19 PHE n 2 20 LEU n 2 21 GLY n 2 22 ALA n 2 23 MET n 2 24 THR n 2 25 VAL n 2 26 THR n 2 27 GLN n 2 28 TYR n 2 29 VAL n 2 30 LEU n 2 31 GLU n 2 32 VAL n 2 33 ASP n 2 34 GLY n 2 35 GLY n 2 36 ALA n 2 37 SER n 2 38 GLY n 2 39 GLU n 2 40 LYS n 2 41 GLU n 2 42 PHE n 2 43 ILE n 2 44 VAL n 2 45 ILE n 2 46 ARG n 2 47 CYS n 2 48 MET n 2 49 GLY n 2 50 ASP n 2 51 ASN n 2 52 PHE n 2 53 PRO n 2 54 ALA n 2 55 SER n 2 56 LEU n 2 57 LEU n 2 58 LYS n 2 59 ASP n 2 60 GLN n 2 61 VAL n 2 62 LYS n 2 63 LEU n 2 64 GLY n 2 65 SER n 2 66 ARG n 2 67 VAL n 2 68 LEU n 2 69 VAL n 2 70 GLN n 2 71 GLY n 2 72 THR n 2 73 LEU n 2 74 ARG n 2 75 MET n 2 76 ASN n 2 77 ARG n 2 78 HIS n 2 79 VAL n 2 80 ASP n 2 81 ASP n 2 82 VAL n 2 83 SER n 2 84 LYS n 2 85 ARG n 2 86 LEU n 2 87 HIS n 2 88 ALA n 2 89 TYR n 2 90 PRO n 2 91 PHE n 2 92 ILE n 2 93 GLN n 2 94 VAL n 2 95 VAL n 2 96 PRO n 2 97 PRO n 2 98 LEU n 2 99 GLY n 2 100 TYR n 2 101 VAL n 2 102 LYS n 2 103 VAL n 2 104 VAL n 2 105 GLY n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? llama ? ? ? ? ? ? ? ? 'Lama glama' 9844 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? PLASMID ? ? ? pRSF ? ? 2 1 sample ? 1 34 ? ? ? ? ? ? ? ? ? 'Trypanosoma brucei' 5691 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? PLASMID ? ? ? pRSF ? ? 2 2 sample ? 39 105 ? ? ? ? ? ? ? ? ? 'Trypanosoma brucei' 5691 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? PLASMID ? ? ? pRSF ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 PDB 4DK3 4DK3 1 ? ? ? 2 UNP Q95W15_9TRYP Q95W15 2 RAGSNALMIGRIADVQHGFLGAMTVTQYVLEVDG 624 ? 3 UNP Q95W15_9TRYP Q95W15 2 EKEFIVIRCMGDNFPASLLKDQVKLGSRVLVQGTLRMNRHVDDVSKRLHAYPFIQVVPPLGYVKVVG 696 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4DK3 A 1 ? 133 ? 4DK3 1 ? 133 ? 1 133 2 1 4DK3 B 1 ? 133 ? 4DK3 1 ? 133 ? 1 133 3 2 4DK3 C 1 ? 34 ? Q95W15 624 ? 657 ? 624 657 4 3 4DK3 C 39 ? 105 ? Q95W15 696 ? 762 ? 696 762 5 2 4DK3 D 1 ? 34 ? Q95W15 624 ? 657 ? 624 657 6 3 4DK3 D 39 ? 105 ? Q95W15 696 ? 762 ? 696 762 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4DK3 GLY C 35 ? UNP Q95W15 ? ? LINKER 692 1 1 4DK3 ALA C 36 ? UNP Q95W15 ? ? LINKER 693 2 1 4DK3 SER C 37 ? UNP Q95W15 ? ? LINKER 694 3 1 4DK3 GLY C 38 ? UNP Q95W15 ? ? LINKER 695 4 2 4DK3 GLY D 35 ? UNP Q95W15 ? ? LINKER 692 5 2 4DK3 ALA D 36 ? UNP Q95W15 ? ? LINKER 693 6 2 4DK3 SER D 37 ? UNP Q95W15 ? ? LINKER 694 7 2 4DK3 GLY D 38 ? UNP Q95W15 ? ? LINKER 695 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4DK3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.26 _exptl_crystal.density_percent_sol 45.62 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;0.05 M ammonium sulfate, 0.05M sodium acetate trihydrate, 30% w/v PEG 2000 MME, 5% v/v jeffamine M600, pH 5.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; # _diffrn.id 1 _diffrn.ambient_temp 77 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details 'M0 mirror: toroidal SiC' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator '6m spherical grating monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9792 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4DK3 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 94.0300 _reflns.d_resolution_high 2.750 _reflns.number_obs 12360 _reflns.number_all ? _reflns.percent_possible_obs 99.500 _reflns.pdbx_Rmerge_I_obs 0.101 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.900 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.000 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared 1 1 2.750 2.800 93.700 0.484 ? ? 5.200 ? ? ? ? ? ? 1 2 2.800 2.850 97.500 0.483 ? ? 5.800 ? ? ? ? ? ? 1 3 2.850 2.900 99.300 0.468 ? ? 6.600 ? ? ? ? ? ? 1 4 2.900 2.960 100.000 0.411 ? ? 7.000 ? ? ? ? ? ? 1 5 2.960 3.030 100.000 0.328 ? ? 7.300 ? ? ? ? ? ? 1 6 3.030 3.100 100.000 0.259 ? ? 7.300 ? ? ? ? ? ? 1 7 3.100 3.170 100.000 0.250 ? ? 7.400 ? ? ? ? ? ? 1 8 3.170 3.260 100.000 0.214 ? ? 7.300 ? ? ? ? ? ? 1 9 3.260 3.360 100.000 0.169 ? ? 7.300 ? ? ? ? ? ? 1 10 3.360 3.460 100.000 0.150 ? ? 7.300 ? ? ? ? ? ? 1 11 3.460 3.590 100.000 0.130 ? ? 7.400 ? ? ? ? ? ? 1 12 3.590 3.730 100.000 0.113 ? ? 7.300 ? ? ? ? ? ? 1 13 3.730 3.900 100.000 0.105 ? ? 7.400 ? ? ? ? ? ? 1 14 3.900 4.110 100.000 0.089 ? ? 7.200 ? ? ? ? ? ? 1 15 4.110 4.360 100.000 0.082 ? ? 7.200 ? ? ? ? ? ? 1 16 4.360 4.700 100.000 0.083 ? ? 7.200 ? ? ? ? ? ? 1 17 4.700 5.170 100.000 0.083 ? ? 7.100 ? ? ? ? ? ? 1 18 5.170 5.920 100.000 0.082 ? ? 7.000 ? ? ? ? ? ? 1 19 5.920 7.460 100.000 0.066 ? ? 6.800 ? ? ? ? ? ? 1 20 7.460 50.000 99.600 0.056 ? ? 6.400 ? ? ? ? ? ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4DK3 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 11720 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 94.03 _refine.ls_d_res_high 2.76 _refine.ls_percent_reflns_obs 98.02 _refine.ls_R_factor_obs 0.22640 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22428 _refine.ls_R_factor_R_free 0.26740 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 601 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 1.000 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc 0.925 _refine.correlation_coeff_Fo_to_Fc_free 0.889 _refine.B_iso_mean 65.269 _refine.aniso_B[1][1] -3.08 _refine.aniso_B[2][2] 3.63 _refine.aniso_B[3][3] -0.55 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.805 _refine.pdbx_overall_ESU_R_Free 0.397 _refine.overall_SU_ML 0.334 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 38.423 _refine.overall_SU_R_Cruickshank_DPI 0.7969 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3238 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3238 _refine_hist.d_res_high 2.76 _refine_hist.d_res_low 94.03 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.005 0.019 ? 3285 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 0.917 1.943 ? 4424 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.940 5.000 ? 405 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.799 23.243 ? 148 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.732 15.000 ? 567 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 12.777 15.000 ? 28 'X-RAY DIFFRACTION' ? r_chiral_restr 0.062 0.200 ? 503 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 2430 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.76 _refine_ls_shell.d_res_low 2.833 _refine_ls_shell.number_reflns_R_work 652 _refine_ls_shell.R_factor_R_work 0.337 _refine_ls_shell.percent_reflns_obs 78.87 _refine_ls_shell.R_factor_R_free 0.498 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 35 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 4DK3 _struct.title 'Structure of Editosome protein' _struct.pdbx_descriptor 'single domain antibody VHH, RNA-editing complex protein MP81' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DK3 _struct_keywords.text 'KREPA1, VHH, Single domain antibody, PROTEIN BINDING, RNA BINDING PROTEIN-IMMUNE SYSTEM complex' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN/IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 28 ? LEU A 31 ? THR A 28 LEU A 31 5 ? 4 HELX_P HELX_P2 2 ASP A 62 ? LYS A 65 ? ASP A 62 LYS A 65 5 ? 4 HELX_P HELX_P3 3 LYS A 87 ? THR A 91 ? LYS A 87 THR A 91 5 ? 5 HELX_P HELX_P4 4 MET A 110 ? TYR A 114 ? MET A 110 TYR A 114 5 ? 5 HELX_P HELX_P5 5 THR B 28 ? LEU B 31 ? THR B 28 LEU B 31 5 ? 4 HELX_P HELX_P6 6 LYS B 87 ? THR B 91 ? LYS B 87 THR B 91 5 ? 5 HELX_P HELX_P7 7 MET B 110 ? TYR B 114 ? MET B 110 TYR B 114 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 96 SG ? ? A CYS 22 A CYS 96 1_555 ? ? ? ? ? ? ? 2.050 ? disulf2 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? B CYS 22 B CYS 96 1_555 ? ? ? ? ? ? ? 2.044 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 6 ? C ? 4 ? D ? 7 ? E ? 9 ? F ? 5 ? G ? 4 ? H ? 6 ? I ? 4 ? J ? 2 ? K ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? parallel D 5 6 ? anti-parallel D 6 7 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel E 5 6 ? anti-parallel E 6 7 ? parallel E 7 8 ? anti-parallel E 8 9 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel F 4 5 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel H 4 5 ? anti-parallel H 5 6 ? anti-parallel I 1 2 ? parallel I 2 3 ? anti-parallel I 3 4 ? anti-parallel J 1 2 ? anti-parallel K 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 2 ? SER A 7 ? VAL A 2 SER A 7 A 2 LEU A 18 ? GLY A 26 ? LEU A 18 GLY A 26 A 3 THR A 78 ? MET A 83 ? THR A 78 MET A 83 A 4 PHE A 68 ? ASP A 73 ? PHE A 68 ASP A 73 B 1 GLY A 10 ? GLN A 13 ? GLY A 10 GLN A 13 B 2 THR A 121 ? SER A 126 ? THR A 121 SER A 126 B 3 ALA A 92 ? ALA A 98 ? ALA A 92 ALA A 98 B 4 MET A 34 ? GLN A 39 ? MET A 34 GLN A 39 B 5 GLU A 46 ? ILE A 51 ? GLU A 46 ILE A 51 B 6 THR A 58 ? TYR A 60 ? THR A 58 TYR A 60 C 1 GLY A 10 ? GLN A 13 ? GLY A 10 GLN A 13 C 2 THR A 121 ? SER A 126 ? THR A 121 SER A 126 C 3 ALA A 92 ? ALA A 98 ? ALA A 92 ALA A 98 C 4 TYR A 116 ? TRP A 117 ? TYR A 116 TRP A 117 D 1 VAL A 107 ? THR A 108 ? VAL A 107 THR A 108 D 2 ASN C 5 ? PHE C 19 ? ASN C 628 PHE C 642 D 3 THR C 24 ? GLU C 31 ? THR C 647 GLU C 654 D 4 PHE C 42 ? CYS C 47 ? PHE C 699 CYS C 704 D 5 PHE C 91 ? VAL C 94 ? PHE C 748 VAL C 751 D 6 ARG C 66 ? ARG C 74 ? ARG C 723 ARG C 731 D 7 TYR C 100 ? VAL C 103 ? TYR C 757 VAL C 760 E 1 TYR C 100 ? VAL C 103 ? TYR C 757 VAL C 760 E 2 ARG C 66 ? ARG C 74 ? ARG C 723 ARG C 731 E 3 ASN C 5 ? PHE C 19 ? ASN C 628 PHE C 642 E 4 ASN D 5 ? PHE D 19 ? ASN D 628 PHE D 642 E 5 THR D 24 ? GLU D 31 ? THR D 647 GLU D 654 E 6 PHE D 42 ? CYS D 47 ? PHE D 699 CYS D 704 E 7 PHE D 91 ? VAL D 95 ? PHE D 748 VAL D 752 E 8 ARG D 66 ? ARG D 74 ? ARG D 723 ARG D 731 E 9 GLY D 99 ? GLY D 105 ? GLY D 756 GLY D 762 F 1 GLY D 99 ? GLY D 105 ? GLY D 756 GLY D 762 F 2 ARG D 66 ? ARG D 74 ? ARG D 723 ARG D 731 F 3 ASN D 5 ? PHE D 19 ? ASN D 628 PHE D 642 F 4 ASN C 5 ? PHE C 19 ? ASN C 628 PHE C 642 F 5 VAL A 107 ? THR A 108 ? VAL A 107 THR A 108 G 1 VAL B 2 ? SER B 7 ? VAL B 2 SER B 7 G 2 LEU B 18 ? GLY B 26 ? LEU B 18 GLY B 26 G 3 THR B 78 ? MET B 83 ? THR B 78 MET B 83 G 4 PHE B 68 ? ASP B 73 ? PHE B 68 ASP B 73 H 1 GLY B 10 ? VAL B 12 ? GLY B 10 VAL B 12 H 2 THR B 121 ? VAL B 125 ? THR B 121 VAL B 125 H 3 ALA B 92 ? ALA B 98 ? ALA B 92 ALA B 98 H 4 MET B 34 ? GLN B 39 ? MET B 34 GLN B 39 H 5 GLU B 46 ? ILE B 51 ? GLU B 46 ILE B 51 H 6 THR B 58 ? TYR B 60 ? THR B 58 TYR B 60 I 1 GLY B 10 ? VAL B 12 ? GLY B 10 VAL B 12 I 2 THR B 121 ? VAL B 125 ? THR B 121 VAL B 125 I 3 ALA B 92 ? ALA B 98 ? ALA B 92 ALA B 98 I 4 TYR B 116 ? TRP B 117 ? TYR B 116 TRP B 117 J 1 ARG C 77 ? VAL C 79 ? ARG C 734 VAL C 736 J 2 LEU C 86 ? ALA C 88 ? LEU C 743 ALA C 745 K 1 ARG D 77 ? HIS D 78 ? ARG D 734 HIS D 735 K 2 HIS D 87 ? ALA D 88 ? HIS D 744 ALA D 745 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 5 ? N GLN A 5 O ALA A 23 ? O ALA A 23 A 2 3 N CYS A 22 ? N CYS A 22 O VAL A 79 ? O VAL A 79 A 3 4 O GLN A 82 ? O GLN A 82 N THR A 69 ? N THR A 69 B 1 2 N GLY A 10 ? N GLY A 10 O THR A 124 ? O THR A 124 B 2 3 O THR A 121 ? O THR A 121 N TYR A 94 ? N TYR A 94 B 3 4 O TYR A 95 ? O TYR A 95 N PHE A 37 ? N PHE A 37 B 4 5 N TRP A 36 ? N TRP A 36 O ALA A 49 ? O ALA A 49 B 5 6 N ALA A 50 ? N ALA A 50 O TYR A 59 ? O TYR A 59 C 1 2 N GLY A 10 ? N GLY A 10 O THR A 124 ? O THR A 124 C 2 3 O THR A 121 ? O THR A 121 N TYR A 94 ? N TYR A 94 C 3 4 N ALA A 98 ? N ALA A 98 O TYR A 116 ? O TYR A 116 D 1 2 N VAL A 107 ? N VAL A 107 O PHE C 19 ? O PHE C 642 D 2 3 N ALA C 13 ? N ALA C 636 O VAL C 29 ? O VAL C 652 D 3 4 N TYR C 28 ? N TYR C 651 O ILE C 45 ? O ILE C 702 D 4 5 N ARG C 46 ? N ARG C 703 O ILE C 92 ? O ILE C 749 D 5 6 O GLN C 93 ? O GLN C 750 N THR C 72 ? N THR C 729 D 6 7 N LEU C 68 ? N LEU C 725 O LYS C 102 ? O LYS C 759 E 1 2 O LYS C 102 ? O LYS C 759 N LEU C 68 ? N LEU C 725 E 2 3 O VAL C 69 ? O VAL C 726 N MET C 8 ? N MET C 631 E 3 4 N LEU C 7 ? N LEU C 630 O ASN D 5 ? O ASN D 628 E 4 5 N ALA D 13 ? N ALA D 636 O VAL D 29 ? O VAL D 652 E 5 6 N THR D 26 ? N THR D 649 O CYS D 47 ? O CYS D 704 E 6 7 N ARG D 46 ? N ARG D 703 O VAL D 94 ? O VAL D 751 E 7 8 O GLN D 93 ? O GLN D 750 N THR D 72 ? N THR D 729 E 8 9 N LEU D 68 ? N LEU D 725 O LYS D 102 ? O LYS D 759 F 1 2 O LYS D 102 ? O LYS D 759 N LEU D 68 ? N LEU D 725 F 2 3 O VAL D 69 ? O VAL D 726 N MET D 8 ? N MET D 631 F 3 4 O ASN D 5 ? O ASN D 628 N LEU C 7 ? N LEU C 630 F 4 5 O PHE C 19 ? O PHE C 642 N VAL A 107 ? N VAL A 107 G 1 2 N SER B 7 ? N SER B 7 O SER B 21 ? O SER B 21 G 2 3 N LEU B 18 ? N LEU B 18 O MET B 83 ? O MET B 83 G 3 4 O GLU B 80 ? O GLU B 80 N SER B 71 ? N SER B 71 H 1 2 N GLY B 10 ? N GLY B 10 O THR B 124 ? O THR B 124 H 2 3 O THR B 121 ? O THR B 121 N TYR B 94 ? N TYR B 94 H 3 4 O TYR B 95 ? O TYR B 95 N PHE B 37 ? N PHE B 37 H 4 5 N TRP B 36 ? N TRP B 36 O ALA B 49 ? O ALA B 49 H 5 6 N ALA B 50 ? N ALA B 50 O TYR B 59 ? O TYR B 59 I 1 2 N GLY B 10 ? N GLY B 10 O THR B 124 ? O THR B 124 I 2 3 O THR B 121 ? O THR B 121 N TYR B 94 ? N TYR B 94 I 3 4 N ALA B 98 ? N ALA B 98 O TYR B 116 ? O TYR B 116 J 1 2 N HIS C 78 ? N HIS C 735 O HIS C 87 ? O HIS C 744 K 1 2 N HIS D 78 ? N HIS D 735 O HIS D 87 ? O HIS D 744 # _atom_sites.entry_id 4DK3 _atom_sites.fract_transf_matrix[1][1] 0.010440 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009496 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010635 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 1 1 GLN GLN A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 MET 34 34 34 MET MET A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 TRP 36 36 36 TRP TRP A . n A 1 37 PHE 37 37 37 PHE PHE A . n A 1 38 ARG 38 38 38 ARG ARG A . n A 1 39 GLN 39 39 39 GLN GLN A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 PHE 47 47 47 PHE PHE A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 PHE 68 68 68 PHE PHE A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 MET 83 83 83 MET MET A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 PRO 88 88 88 PRO PRO A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 TYR 94 94 94 TYR TYR A . n A 1 95 TYR 95 95 95 TYR TYR A . n A 1 96 CYS 96 96 96 CYS CYS A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 ARG 100 100 100 ARG ARG A . n A 1 101 PHE 101 101 101 PHE PHE A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 THR 103 103 103 THR THR A . n A 1 104 MET 104 104 104 MET MET A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 VAL 107 107 107 VAL VAL A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 ILE 109 109 109 ILE ILE A . n A 1 110 MET 110 110 110 MET MET A . n A 1 111 THR 111 111 111 THR THR A . n A 1 112 ASN 112 112 112 ASN ASN A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 TYR 114 114 114 TYR TYR A . n A 1 115 ASP 115 115 115 ASP ASP A . n A 1 116 TYR 116 116 116 TYR TYR A . n A 1 117 TRP 117 117 117 TRP TRP A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 GLN 119 119 119 GLN GLN A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 GLN 122 122 122 GLN GLN A . n A 1 123 VAL 123 123 123 VAL VAL A . n A 1 124 THR 124 124 124 THR THR A . n A 1 125 VAL 125 125 125 VAL VAL A . n A 1 126 SER 126 126 126 SER SER A . n A 1 127 SER 127 127 127 SER SER A . n A 1 128 HIS 128 128 ? ? ? A . n A 1 129 HIS 129 129 ? ? ? A . n A 1 130 HIS 130 130 ? ? ? A . n A 1 131 HIS 131 131 ? ? ? A . n A 1 132 HIS 132 132 ? ? ? A . n A 1 133 HIS 133 133 ? ? ? A . n B 1 1 GLN 1 1 1 GLN GLN B . n B 1 2 VAL 2 2 2 VAL VAL B . n B 1 3 GLN 3 3 3 GLN GLN B . n B 1 4 LEU 4 4 4 LEU LEU B . n B 1 5 GLN 5 5 5 GLN GLN B . n B 1 6 GLU 6 6 6 GLU GLU B . n B 1 7 SER 7 7 7 SER SER B . n B 1 8 GLY 8 8 8 GLY GLY B . n B 1 9 GLY 9 9 9 GLY GLY B . n B 1 10 GLY 10 10 10 GLY GLY B . n B 1 11 LEU 11 11 11 LEU LEU B . n B 1 12 VAL 12 12 12 VAL VAL B . n B 1 13 GLN 13 13 13 GLN GLN B . n B 1 14 ALA 14 14 14 ALA ALA B . n B 1 15 GLY 15 15 15 GLY GLY B . n B 1 16 GLY 16 16 16 GLY GLY B . n B 1 17 SER 17 17 17 SER SER B . n B 1 18 LEU 18 18 18 LEU LEU B . n B 1 19 ARG 19 19 19 ARG ARG B . n B 1 20 LEU 20 20 20 LEU LEU B . n B 1 21 SER 21 21 21 SER SER B . n B 1 22 CYS 22 22 22 CYS CYS B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 ALA 24 24 24 ALA ALA B . n B 1 25 SER 25 25 25 SER SER B . n B 1 26 GLY 26 26 26 GLY GLY B . n B 1 27 ARG 27 27 27 ARG ARG B . n B 1 28 THR 28 28 28 THR THR B . n B 1 29 SER 29 29 29 SER SER B . n B 1 30 SER 30 30 30 SER SER B . n B 1 31 LEU 31 31 31 LEU LEU B . n B 1 32 TYR 32 32 32 TYR TYR B . n B 1 33 SER 33 33 33 SER SER B . n B 1 34 MET 34 34 34 MET MET B . n B 1 35 GLY 35 35 35 GLY GLY B . n B 1 36 TRP 36 36 36 TRP TRP B . n B 1 37 PHE 37 37 37 PHE PHE B . n B 1 38 ARG 38 38 38 ARG ARG B . n B 1 39 GLN 39 39 39 GLN GLN B . n B 1 40 ALA 40 40 40 ALA ALA B . n B 1 41 PRO 41 41 41 PRO PRO B . n B 1 42 GLY 42 42 42 GLY GLY B . n B 1 43 LYS 43 43 43 LYS LYS B . n B 1 44 GLU 44 44 44 GLU GLU B . n B 1 45 ARG 45 45 45 ARG ARG B . n B 1 46 GLU 46 46 46 GLU GLU B . n B 1 47 PHE 47 47 47 PHE PHE B . n B 1 48 VAL 48 48 48 VAL VAL B . n B 1 49 ALA 49 49 49 ALA ALA B . n B 1 50 ALA 50 50 50 ALA ALA B . n B 1 51 ILE 51 51 51 ILE ILE B . n B 1 52 SER 52 52 52 SER SER B . n B 1 53 ARG 53 53 53 ARG ARG B . n B 1 54 ASN 54 54 54 ASN ASN B . n B 1 55 GLY 55 55 55 GLY GLY B . n B 1 56 ALA 56 56 56 ALA ALA B . n B 1 57 ASN 57 57 57 ASN ASN B . n B 1 58 THR 58 58 58 THR THR B . n B 1 59 TYR 59 59 59 TYR TYR B . n B 1 60 TYR 60 60 60 TYR TYR B . n B 1 61 THR 61 61 61 THR THR B . n B 1 62 ASP 62 62 62 ASP ASP B . n B 1 63 SER 63 63 63 SER SER B . n B 1 64 VAL 64 64 64 VAL VAL B . n B 1 65 LYS 65 65 65 LYS LYS B . n B 1 66 GLY 66 66 66 GLY GLY B . n B 1 67 ARG 67 67 67 ARG ARG B . n B 1 68 PHE 68 68 68 PHE PHE B . n B 1 69 THR 69 69 69 THR THR B . n B 1 70 ILE 70 70 70 ILE ILE B . n B 1 71 SER 71 71 71 SER SER B . n B 1 72 ARG 72 72 72 ARG ARG B . n B 1 73 ASP 73 73 73 ASP ASP B . n B 1 74 ASN 74 74 74 ASN ASN B . n B 1 75 ALA 75 75 75 ALA ALA B . n B 1 76 LYS 76 76 76 LYS LYS B . n B 1 77 ASN 77 77 77 ASN ASN B . n B 1 78 THR 78 78 78 THR THR B . n B 1 79 VAL 79 79 79 VAL VAL B . n B 1 80 GLU 80 80 80 GLU GLU B . n B 1 81 LEU 81 81 81 LEU LEU B . n B 1 82 GLN 82 82 82 GLN GLN B . n B 1 83 MET 83 83 83 MET MET B . n B 1 84 ASN 84 84 84 ASN ASN B . n B 1 85 SER 85 85 85 SER SER B . n B 1 86 LEU 86 86 86 LEU LEU B . n B 1 87 LYS 87 87 87 LYS LYS B . n B 1 88 PRO 88 88 88 PRO PRO B . n B 1 89 GLU 89 89 89 GLU GLU B . n B 1 90 ASP 90 90 90 ASP ASP B . n B 1 91 THR 91 91 91 THR THR B . n B 1 92 ALA 92 92 92 ALA ALA B . n B 1 93 VAL 93 93 93 VAL VAL B . n B 1 94 TYR 94 94 94 TYR TYR B . n B 1 95 TYR 95 95 95 TYR TYR B . n B 1 96 CYS 96 96 96 CYS CYS B . n B 1 97 ALA 97 97 97 ALA ALA B . n B 1 98 ALA 98 98 98 ALA ALA B . n B 1 99 ASP 99 99 99 ASP ASP B . n B 1 100 ARG 100 100 100 ARG ARG B . n B 1 101 PHE 101 101 101 PHE PHE B . n B 1 102 PRO 102 102 102 PRO PRO B . n B 1 103 THR 103 103 103 THR THR B . n B 1 104 MET 104 104 104 MET MET B . n B 1 105 GLU 105 105 105 GLU GLU B . n B 1 106 VAL 106 106 106 VAL VAL B . n B 1 107 VAL 107 107 107 VAL VAL B . n B 1 108 THR 108 108 108 THR THR B . n B 1 109 ILE 109 109 109 ILE ILE B . n B 1 110 MET 110 110 110 MET MET B . n B 1 111 THR 111 111 111 THR THR B . n B 1 112 ASN 112 112 112 ASN ASN B . n B 1 113 GLU 113 113 113 GLU GLU B . n B 1 114 TYR 114 114 114 TYR TYR B . n B 1 115 ASP 115 115 115 ASP ASP B . n B 1 116 TYR 116 116 116 TYR TYR B . n B 1 117 TRP 117 117 117 TRP TRP B . n B 1 118 GLY 118 118 118 GLY GLY B . n B 1 119 GLN 119 119 119 GLN GLN B . n B 1 120 GLY 120 120 120 GLY GLY B . n B 1 121 THR 121 121 121 THR THR B . n B 1 122 GLN 122 122 122 GLN GLN B . n B 1 123 VAL 123 123 123 VAL VAL B . n B 1 124 THR 124 124 124 THR THR B . n B 1 125 VAL 125 125 125 VAL VAL B . n B 1 126 SER 126 126 126 SER SER B . n B 1 127 SER 127 127 127 SER SER B . n B 1 128 HIS 128 128 ? ? ? B . n B 1 129 HIS 129 129 ? ? ? B . n B 1 130 HIS 130 130 ? ? ? B . n B 1 131 HIS 131 131 ? ? ? B . n B 1 132 HIS 132 132 ? ? ? B . n B 1 133 HIS 133 133 ? ? ? B . n C 2 1 ARG 1 624 ? ? ? C . n C 2 2 ALA 2 625 ? ? ? C . n C 2 3 GLY 3 626 ? ? ? C . n C 2 4 SER 4 627 627 SER SER C . n C 2 5 ASN 5 628 628 ASN ASN C . n C 2 6 ALA 6 629 629 ALA ALA C . n C 2 7 LEU 7 630 630 LEU LEU C . n C 2 8 MET 8 631 631 MET MET C . n C 2 9 ILE 9 632 632 ILE ILE C . n C 2 10 GLY 10 633 633 GLY GLY C . n C 2 11 ARG 11 634 634 ARG ARG C . n C 2 12 ILE 12 635 635 ILE ILE C . n C 2 13 ALA 13 636 636 ALA ALA C . n C 2 14 ASP 14 637 637 ASP ASP C . n C 2 15 VAL 15 638 638 VAL VAL C . n C 2 16 GLN 16 639 639 GLN GLN C . n C 2 17 HIS 17 640 640 HIS HIS C . n C 2 18 GLY 18 641 641 GLY GLY C . n C 2 19 PHE 19 642 642 PHE PHE C . n C 2 20 LEU 20 643 643 LEU LEU C . n C 2 21 GLY 21 644 644 GLY GLY C . n C 2 22 ALA 22 645 645 ALA ALA C . n C 2 23 MET 23 646 646 MET MET C . n C 2 24 THR 24 647 647 THR THR C . n C 2 25 VAL 25 648 648 VAL VAL C . n C 2 26 THR 26 649 649 THR THR C . n C 2 27 GLN 27 650 650 GLN GLN C . n C 2 28 TYR 28 651 651 TYR TYR C . n C 2 29 VAL 29 652 652 VAL VAL C . n C 2 30 LEU 30 653 653 LEU LEU C . n C 2 31 GLU 31 654 654 GLU GLU C . n C 2 32 VAL 32 655 655 VAL VAL C . n C 2 33 ASP 33 656 656 ASP ASP C . n C 2 34 GLY 34 657 ? ? ? C . n C 2 35 GLY 35 692 ? ? ? C . n C 2 36 ALA 36 693 ? ? ? C . n C 2 37 SER 37 694 ? ? ? C . n C 2 38 GLY 38 695 ? ? ? C . n C 2 39 GLU 39 696 ? ? ? C . n C 2 40 LYS 40 697 697 LYS LYS C . n C 2 41 GLU 41 698 698 GLU GLU C . n C 2 42 PHE 42 699 699 PHE PHE C . n C 2 43 ILE 43 700 700 ILE ILE C . n C 2 44 VAL 44 701 701 VAL VAL C . n C 2 45 ILE 45 702 702 ILE ILE C . n C 2 46 ARG 46 703 703 ARG ARG C . n C 2 47 CYS 47 704 704 CYS CYS C . n C 2 48 MET 48 705 705 MET MET C . n C 2 49 GLY 49 706 ? ? ? C . n C 2 50 ASP 50 707 ? ? ? C . n C 2 51 ASN 51 708 ? ? ? C . n C 2 52 PHE 52 709 ? ? ? C . n C 2 53 PRO 53 710 ? ? ? C . n C 2 54 ALA 54 711 ? ? ? C . n C 2 55 SER 55 712 ? ? ? C . n C 2 56 LEU 56 713 ? ? ? C . n C 2 57 LEU 57 714 ? ? ? C . n C 2 58 LYS 58 715 ? ? ? C . n C 2 59 ASP 59 716 716 ASP ASP C . n C 2 60 GLN 60 717 717 GLN GLN C . n C 2 61 VAL 61 718 718 VAL VAL C . n C 2 62 LYS 62 719 719 LYS LYS C . n C 2 63 LEU 63 720 720 LEU LEU C . n C 2 64 GLY 64 721 721 GLY GLY C . n C 2 65 SER 65 722 722 SER SER C . n C 2 66 ARG 66 723 723 ARG ARG C . n C 2 67 VAL 67 724 724 VAL VAL C . n C 2 68 LEU 68 725 725 LEU LEU C . n C 2 69 VAL 69 726 726 VAL VAL C . n C 2 70 GLN 70 727 727 GLN GLN C . n C 2 71 GLY 71 728 728 GLY GLY C . n C 2 72 THR 72 729 729 THR THR C . n C 2 73 LEU 73 730 730 LEU LEU C . n C 2 74 ARG 74 731 731 ARG ARG C . n C 2 75 MET 75 732 732 MET MET C . n C 2 76 ASN 76 733 733 ASN ASN C . n C 2 77 ARG 77 734 734 ARG ARG C . n C 2 78 HIS 78 735 735 HIS HIS C . n C 2 79 VAL 79 736 736 VAL VAL C . n C 2 80 ASP 80 737 737 ASP ASP C . n C 2 81 ASP 81 738 738 ASP ASP C . n C 2 82 VAL 82 739 ? ? ? C . n C 2 83 SER 83 740 740 SER SER C . n C 2 84 LYS 84 741 741 LYS LYS C . n C 2 85 ARG 85 742 742 ARG ARG C . n C 2 86 LEU 86 743 743 LEU LEU C . n C 2 87 HIS 87 744 744 HIS HIS C . n C 2 88 ALA 88 745 745 ALA ALA C . n C 2 89 TYR 89 746 746 TYR TYR C . n C 2 90 PRO 90 747 747 PRO PRO C . n C 2 91 PHE 91 748 748 PHE PHE C . n C 2 92 ILE 92 749 749 ILE ILE C . n C 2 93 GLN 93 750 750 GLN GLN C . n C 2 94 VAL 94 751 751 VAL VAL C . n C 2 95 VAL 95 752 752 VAL VAL C . n C 2 96 PRO 96 753 ? ? ? C . n C 2 97 PRO 97 754 754 PRO PRO C . n C 2 98 LEU 98 755 755 LEU LEU C . n C 2 99 GLY 99 756 756 GLY GLY C . n C 2 100 TYR 100 757 757 TYR TYR C . n C 2 101 VAL 101 758 758 VAL VAL C . n C 2 102 LYS 102 759 759 LYS LYS C . n C 2 103 VAL 103 760 760 VAL VAL C . n C 2 104 VAL 104 761 761 VAL VAL C . n C 2 105 GLY 105 762 ? ? ? C . n D 2 1 ARG 1 624 ? ? ? D . n D 2 2 ALA 2 625 ? ? ? D . n D 2 3 GLY 3 626 ? ? ? D . n D 2 4 SER 4 627 627 SER SER D . n D 2 5 ASN 5 628 628 ASN ASN D . n D 2 6 ALA 6 629 629 ALA ALA D . n D 2 7 LEU 7 630 630 LEU LEU D . n D 2 8 MET 8 631 631 MET MET D . n D 2 9 ILE 9 632 632 ILE ILE D . n D 2 10 GLY 10 633 633 GLY GLY D . n D 2 11 ARG 11 634 634 ARG ARG D . n D 2 12 ILE 12 635 635 ILE ILE D . n D 2 13 ALA 13 636 636 ALA ALA D . n D 2 14 ASP 14 637 637 ASP ASP D . n D 2 15 VAL 15 638 638 VAL VAL D . n D 2 16 GLN 16 639 639 GLN GLN D . n D 2 17 HIS 17 640 640 HIS HIS D . n D 2 18 GLY 18 641 641 GLY GLY D . n D 2 19 PHE 19 642 642 PHE PHE D . n D 2 20 LEU 20 643 643 LEU LEU D . n D 2 21 GLY 21 644 644 GLY GLY D . n D 2 22 ALA 22 645 645 ALA ALA D . n D 2 23 MET 23 646 646 MET MET D . n D 2 24 THR 24 647 647 THR THR D . n D 2 25 VAL 25 648 648 VAL VAL D . n D 2 26 THR 26 649 649 THR THR D . n D 2 27 GLN 27 650 650 GLN GLN D . n D 2 28 TYR 28 651 651 TYR TYR D . n D 2 29 VAL 29 652 652 VAL VAL D . n D 2 30 LEU 30 653 653 LEU LEU D . n D 2 31 GLU 31 654 654 GLU GLU D . n D 2 32 VAL 32 655 655 VAL VAL D . n D 2 33 ASP 33 656 ? ? ? D . n D 2 34 GLY 34 657 ? ? ? D . n D 2 35 GLY 35 692 ? ? ? D . n D 2 36 ALA 36 693 ? ? ? D . n D 2 37 SER 37 694 ? ? ? D . n D 2 38 GLY 38 695 ? ? ? D . n D 2 39 GLU 39 696 ? ? ? D . n D 2 40 LYS 40 697 697 LYS LYS D . n D 2 41 GLU 41 698 698 GLU GLU D . n D 2 42 PHE 42 699 699 PHE PHE D . n D 2 43 ILE 43 700 700 ILE ILE D . n D 2 44 VAL 44 701 701 VAL VAL D . n D 2 45 ILE 45 702 702 ILE ILE D . n D 2 46 ARG 46 703 703 ARG ARG D . n D 2 47 CYS 47 704 704 CYS CYS D . n D 2 48 MET 48 705 705 MET MET D . n D 2 49 GLY 49 706 ? ? ? D . n D 2 50 ASP 50 707 ? ? ? D . n D 2 51 ASN 51 708 ? ? ? D . n D 2 52 PHE 52 709 ? ? ? D . n D 2 53 PRO 53 710 ? ? ? D . n D 2 54 ALA 54 711 ? ? ? D . n D 2 55 SER 55 712 ? ? ? D . n D 2 56 LEU 56 713 ? ? ? D . n D 2 57 LEU 57 714 ? ? ? D . n D 2 58 LYS 58 715 ? ? ? D . n D 2 59 ASP 59 716 ? ? ? D . n D 2 60 GLN 60 717 717 GLN GLN D . n D 2 61 VAL 61 718 718 VAL VAL D . n D 2 62 LYS 62 719 719 LYS LYS D . n D 2 63 LEU 63 720 720 LEU LEU D . n D 2 64 GLY 64 721 721 GLY GLY D . n D 2 65 SER 65 722 722 SER SER D . n D 2 66 ARG 66 723 723 ARG ARG D . n D 2 67 VAL 67 724 724 VAL VAL D . n D 2 68 LEU 68 725 725 LEU LEU D . n D 2 69 VAL 69 726 726 VAL VAL D . n D 2 70 GLN 70 727 727 GLN GLN D . n D 2 71 GLY 71 728 728 GLY GLY D . n D 2 72 THR 72 729 729 THR THR D . n D 2 73 LEU 73 730 730 LEU LEU D . n D 2 74 ARG 74 731 731 ARG ARG D . n D 2 75 MET 75 732 732 MET MET D . n D 2 76 ASN 76 733 733 ASN ASN D . n D 2 77 ARG 77 734 734 ARG ARG D . n D 2 78 HIS 78 735 735 HIS HIS D . n D 2 79 VAL 79 736 736 VAL VAL D . n D 2 80 ASP 80 737 ? ? ? D . n D 2 81 ASP 81 738 ? ? ? D . n D 2 82 VAL 82 739 739 VAL VAL D . n D 2 83 SER 83 740 740 SER SER D . n D 2 84 LYS 84 741 741 LYS LYS D . n D 2 85 ARG 85 742 742 ARG ARG D . n D 2 86 LEU 86 743 743 LEU LEU D . n D 2 87 HIS 87 744 744 HIS HIS D . n D 2 88 ALA 88 745 745 ALA ALA D . n D 2 89 TYR 89 746 746 TYR TYR D . n D 2 90 PRO 90 747 747 PRO PRO D . n D 2 91 PHE 91 748 748 PHE PHE D . n D 2 92 ILE 92 749 749 ILE ILE D . n D 2 93 GLN 93 750 750 GLN GLN D . n D 2 94 VAL 94 751 751 VAL VAL D . n D 2 95 VAL 95 752 752 VAL VAL D . n D 2 96 PRO 96 753 ? ? ? D . n D 2 97 PRO 97 754 ? ? ? D . n D 2 98 LEU 98 755 755 LEU LEU D . n D 2 99 GLY 99 756 756 GLY GLY D . n D 2 100 TYR 100 757 757 TYR TYR D . n D 2 101 VAL 101 758 758 VAL VAL D . n D 2 102 LYS 102 759 759 LYS LYS D . n D 2 103 VAL 103 760 760 VAL VAL D . n D 2 104 VAL 104 761 761 VAL VAL D . n D 2 105 GLY 105 762 762 GLY GLY D . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B 2 2 D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1360 ? 1 MORE -9 ? 1 'SSA (A^2)' 11440 ? 2 'ABSA (A^2)' 1400 ? 2 MORE -9 ? 2 'SSA (A^2)' 11050 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-07-04 2 'Structure model' 1 1 2012-08-22 3 'Structure model' 1 2 2013-09-18 4 'Structure model' 1 3 2017-08-02 5 'Structure model' 1 4 2017-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Source and taxonomy' 3 4 'Structure model' 'Refinement description' 4 4 'Structure model' 'Source and taxonomy' 5 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' entity_src_gen 2 4 'Structure model' software 3 5 'Structure model' software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_software.classification' 2 5 'Structure model' '_software.contact_author' 3 5 'Structure model' '_software.contact_author_email' 4 5 'Structure model' '_software.date' 5 5 'Structure model' '_software.language' 6 5 'Structure model' '_software.location' 7 5 'Structure model' '_software.name' 8 5 'Structure model' '_software.type' 9 5 'Structure model' '_software.version' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -12.9616 10.7283 -42.8275 0.1202 0.0263 0.0518 0.0452 0.0041 -0.0097 5.3973 3.9658 6.1380 0.1005 -1.4172 -1.5281 -0.0232 -0.0775 0.4535 0.1656 0.1096 0.1674 -0.3202 -0.2404 -0.0864 'X-RAY DIFFRACTION' 2 ? refined -14.6047 13.9187 -43.7487 0.2033 0.0990 0.0777 0.1285 0.0014 0.0159 5.1255 3.2355 7.8866 0.5461 -4.2688 -2.0462 -0.0317 0.0900 0.4385 0.0673 0.2461 0.2785 -0.2068 -0.4256 -0.2144 'X-RAY DIFFRACTION' 3 ? refined -12.6611 15.8237 1.8137 0.1350 0.3254 0.2455 -0.0087 0.0373 -0.0979 7.6127 4.4174 7.3819 1.0915 0.0376 -1.2345 0.1592 -0.1220 -0.3724 -0.2102 0.0232 -0.4854 0.1452 0.3414 -0.1824 'X-RAY DIFFRACTION' 4 ? refined -15.4422 18.9287 0.4907 0.1848 0.4524 0.3123 -0.0136 0.0284 -0.0364 6.8603 4.6282 9.1826 3.3820 -2.9077 -3.2598 0.2096 -0.0384 0.1594 -0.5141 0.4122 -0.1373 0.0463 0.2545 -0.6219 'X-RAY DIFFRACTION' 5 ? refined -33.4979 10.0576 -28.3106 0.2628 0.3021 0.3906 0.2531 0.2065 0.2137 13.2088 6.2523 8.6349 1.5808 -4.0507 -2.6914 -0.0687 0.1265 0.1679 0.0954 0.2553 0.7928 -0.5060 -1.0602 -0.1866 'X-RAY DIFFRACTION' 6 ? refined -33.5645 4.5710 -26.6515 0.3486 0.5537 0.4526 0.1483 0.2955 0.2976 7.0793 12.0032 4.2919 -5.5719 1.4761 1.2790 0.1283 0.2062 -0.5199 -0.3595 0.1084 0.6991 -0.0864 -0.0967 -0.2367 'X-RAY DIFFRACTION' 7 ? refined -34.9051 -9.4722 -11.5887 0.1621 0.5740 0.6185 0.0868 0.1682 0.4103 5.4242 6.5559 6.5393 -2.0658 2.4022 -2.9526 0.1928 0.0838 -0.0225 0.4061 0.6248 0.7708 -0.2291 -1.0003 -0.8176 'X-RAY DIFFRACTION' 8 ? refined -33.2556 -3.0086 -14.5488 0.3399 0.6228 0.4630 0.2401 0.0789 0.3542 4.4189 8.2550 7.8172 1.1391 -4.0232 -3.5064 0.3430 -0.2188 0.3625 0.4414 0.4839 0.7511 -0.8466 -0.5879 -0.8269 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 1 ? ? A 78 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 79 ? ? A 127 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 B 1 ? ? B 81 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 B 82 ? ? B 127 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 C 627 ? ? C 716 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 C 717 ? ? C 761 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 D 627 ? ? D 719 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 D 720 ? ? D 762 ? ? ? ? # _pdbx_phasing_MR.entry_id 4DK3 _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 42.650 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.760 _pdbx_phasing_MR.d_res_low_rotation 45.940 _pdbx_phasing_MR.d_res_high_translation 2.760 _pdbx_phasing_MR.d_res_low_translation 45.940 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER 2.1.4 'Wed Jun 24 14:00:05 2009' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 HKL-2000 . ? ? ? ? 'data collection' ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 32 ? ? -126.24 -87.69 2 1 VAL A 48 ? ? -95.34 -67.90 3 1 PRO A 102 ? ? -69.70 85.66 4 1 TYR B 32 ? ? -121.30 -79.22 5 1 VAL B 48 ? ? -114.74 -71.64 6 1 ALA C 645 ? ? 57.77 15.21 7 1 VAL C 655 ? ? -90.37 -133.98 8 1 ASN D 733 ? ? 53.25 74.02 9 1 LYS D 741 ? ? 68.49 -61.48 10 1 VAL D 761 ? ? -130.07 -44.14 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS 128 ? A HIS 128 2 1 Y 1 A HIS 129 ? A HIS 129 3 1 Y 1 A HIS 130 ? A HIS 130 4 1 Y 1 A HIS 131 ? A HIS 131 5 1 Y 1 A HIS 132 ? A HIS 132 6 1 Y 1 A HIS 133 ? A HIS 133 7 1 Y 1 B HIS 128 ? B HIS 128 8 1 Y 1 B HIS 129 ? B HIS 129 9 1 Y 1 B HIS 130 ? B HIS 130 10 1 Y 1 B HIS 131 ? B HIS 131 11 1 Y 1 B HIS 132 ? B HIS 132 12 1 Y 1 B HIS 133 ? B HIS 133 13 1 Y 1 C ARG 624 ? C ARG 1 14 1 Y 1 C ALA 625 ? C ALA 2 15 1 Y 1 C GLY 626 ? C GLY 3 16 1 Y 1 C GLY 657 ? C GLY 34 17 1 Y 1 C GLY 692 ? C GLY 35 18 1 Y 1 C ALA 693 ? C ALA 36 19 1 Y 1 C SER 694 ? C SER 37 20 1 Y 1 C GLY 695 ? C GLY 38 21 1 Y 1 C GLU 696 ? C GLU 39 22 1 Y 1 C GLY 706 ? C GLY 49 23 1 Y 1 C ASP 707 ? C ASP 50 24 1 Y 1 C ASN 708 ? C ASN 51 25 1 Y 1 C PHE 709 ? C PHE 52 26 1 Y 1 C PRO 710 ? C PRO 53 27 1 Y 1 C ALA 711 ? C ALA 54 28 1 Y 1 C SER 712 ? C SER 55 29 1 Y 1 C LEU 713 ? C LEU 56 30 1 Y 1 C LEU 714 ? C LEU 57 31 1 Y 1 C LYS 715 ? C LYS 58 32 1 Y 1 C VAL 739 ? C VAL 82 33 1 Y 1 C PRO 753 ? C PRO 96 34 1 Y 1 C GLY 762 ? C GLY 105 35 1 Y 1 D ARG 624 ? D ARG 1 36 1 Y 1 D ALA 625 ? D ALA 2 37 1 Y 1 D GLY 626 ? D GLY 3 38 1 Y 1 D ASP 656 ? D ASP 33 39 1 Y 1 D GLY 657 ? D GLY 34 40 1 Y 1 D GLY 692 ? D GLY 35 41 1 Y 1 D ALA 693 ? D ALA 36 42 1 Y 1 D SER 694 ? D SER 37 43 1 Y 1 D GLY 695 ? D GLY 38 44 1 Y 1 D GLU 696 ? D GLU 39 45 1 Y 1 D GLY 706 ? D GLY 49 46 1 Y 1 D ASP 707 ? D ASP 50 47 1 Y 1 D ASN 708 ? D ASN 51 48 1 Y 1 D PHE 709 ? D PHE 52 49 1 Y 1 D PRO 710 ? D PRO 53 50 1 Y 1 D ALA 711 ? D ALA 54 51 1 Y 1 D SER 712 ? D SER 55 52 1 Y 1 D LEU 713 ? D LEU 56 53 1 Y 1 D LEU 714 ? D LEU 57 54 1 Y 1 D LYS 715 ? D LYS 58 55 1 Y 1 D ASP 716 ? D ASP 59 56 1 Y 1 D ASP 737 ? D ASP 80 57 1 Y 1 D ASP 738 ? D ASP 81 58 1 Y 1 D PRO 753 ? D PRO 96 59 1 Y 1 D PRO 754 ? D PRO 97 #