HEADER SIGNALING PROTEIN 06-FEB-12 4DLT TITLE H-RAS SET 2 CA(OAC)2, ON COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE HRAS; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: H-RAS-1, HA-RAS, TRANSFORMING PROTEIN P21, C-H-RAS, P21RAS, COMPND 5 GTPASE HRAS, N-TERMINALLY PROCESSED; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HRAS, HRAS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21 KEYWDS GTP-BINDING, NUCLEOTIDE BINDING, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.HOLZAPFEL,C.MATTOS REVDAT 5 28-FEB-24 4DLT 1 REMARK LINK REVDAT 4 15-NOV-17 4DLT 1 REMARK REVDAT 3 17-OCT-12 4DLT 1 JRNL REVDAT 2 15-AUG-12 4DLT 1 TITLE REVDAT 1 08-AUG-12 4DLT 0 JRNL AUTH G.HOLZAPFEL,G.BUHRMAN,C.MATTOS JRNL TITL SHIFT IN THE EQUILIBRIUM BETWEEN ON AND OFF STATES OF THE JRNL TITL 2 ALLOSTERIC SWITCH IN RAS-GPPNHP AFFECTED BY SMALL MOLECULES JRNL TITL 3 AND BULK SOLVENT COMPOSITION. JRNL REF BIOCHEMISTRY V. 51 6114 2012 JRNL REFN ISSN 0006-2960 JRNL PMID 22845804 JRNL DOI 10.1021/BI300509J REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.1_336 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.65 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.100 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 3 NUMBER OF REFLECTIONS : 20844 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.830 REMARK 3 FREE R VALUE TEST SET COUNT : 1840 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.6557 - 3.9901 1.00 1669 163 0.1744 0.1983 REMARK 3 2 3.9901 - 3.1687 1.00 1618 158 0.1658 0.1669 REMARK 3 3 3.1687 - 2.7687 0.98 1562 153 0.1821 0.2039 REMARK 3 4 2.7687 - 2.5157 0.97 1543 146 0.1852 0.2035 REMARK 3 5 2.5157 - 2.3355 0.97 1534 149 0.1779 0.2151 REMARK 3 6 2.3355 - 2.1979 0.96 1510 147 0.1847 0.2029 REMARK 3 7 2.1979 - 2.0879 0.96 1538 148 0.1714 0.2228 REMARK 3 8 2.0879 - 1.9970 0.96 1503 146 0.1785 0.2113 REMARK 3 9 1.9970 - 1.9202 0.90 1422 137 0.1757 0.2056 REMARK 3 10 1.9202 - 1.8539 0.86 1364 136 0.1789 0.2120 REMARK 3 11 1.8539 - 1.7960 0.86 1355 129 0.2105 0.2404 REMARK 3 12 1.7960 - 1.7446 0.80 1237 118 0.2343 0.3096 REMARK 3 13 1.7446 - 1.6987 0.73 1149 110 0.2791 0.3560 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 41.95 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.56570 REMARK 3 B22 (A**2) : -1.56570 REMARK 3 B33 (A**2) : 3.13150 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1373 REMARK 3 ANGLE : 1.099 1865 REMARK 3 CHIRALITY : 0.069 208 REMARK 3 PLANARITY : 0.004 241 REMARK 3 DIHEDRAL : 16.786 512 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4DLT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000070490. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22540 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.699 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.86500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 200 MM CA ACETATE, PH REMARK 280 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 44.35200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 25.60664 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 44.78667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 44.35200 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 25.60664 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 44.78667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 44.35200 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 25.60664 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 44.78667 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 44.35200 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 25.60664 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 44.78667 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 44.35200 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 25.60664 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 44.78667 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 44.35200 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 25.60664 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 44.78667 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 51.21328 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 89.57333 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 51.21328 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 89.57333 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 51.21328 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 89.57333 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 51.21328 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 89.57333 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 51.21328 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 89.57333 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 51.21328 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 89.57333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -123.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 44.35200 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 76.81992 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -44.35200 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 76.81992 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 MG MG A 205 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 361 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 370 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 408 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 423 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 435 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 73 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 128 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 36 -71.04 -89.50 REMARK 500 GLU A 37 118.93 -167.17 REMARK 500 LYS A 117 32.60 71.13 REMARK 500 ARG A 149 -5.55 77.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 203 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 17 OG REMARK 620 2 THR A 35 OG1 80.6 REMARK 620 3 GNP A 201 O2B 94.4 172.7 REMARK 620 4 GNP A 201 O2G 168.5 88.2 97.0 REMARK 620 5 HOH A 301 O 88.9 85.1 89.5 93.2 REMARK 620 6 HOH A 398 O 88.5 93.9 91.3 89.3 177.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE A 28 O REMARK 620 2 ASP A 30 OD1 84.7 REMARK 620 3 HOH A 307 O 88.9 90.5 REMARK 620 4 HOH A 406 O 163.4 78.9 93.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 204 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 107 O REMARK 620 2 TYR A 137 O 147.7 REMARK 620 3 ACT A 206 OXT 96.8 107.1 REMARK 620 4 ACT A 206 O 73.8 138.5 46.5 REMARK 620 5 HOH A 366 O 101.7 93.7 103.6 69.7 REMARK 620 6 HOH A 414 O 73.7 77.6 163.6 137.9 91.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 205 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 336 O REMARK 620 2 HOH A 353 O 76.3 REMARK 620 3 HOH A 423 O 135.3 72.2 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 206 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4DLR RELATED DB: PDB REMARK 900 RELATED ID: 4DLS RELATED DB: PDB REMARK 900 RELATED ID: 4DLU RELATED DB: PDB REMARK 900 RELATED ID: 4DLV RELATED DB: PDB REMARK 900 RELATED ID: 4DLW RELATED DB: PDB REMARK 900 RELATED ID: 4DLX RELATED DB: PDB REMARK 900 RELATED ID: 4DLY RELATED DB: PDB REMARK 900 RELATED ID: 4DLZ RELATED DB: PDB DBREF 4DLT A 1 166 UNP P01112 RASH_HUMAN 1 166 SEQRES 1 A 166 MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY GLY SEQRES 2 A 166 VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN ASN SEQRES 3 A 166 HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SER SEQRES 4 A 166 TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS LEU SEQRES 5 A 166 LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SER SEQRES 6 A 166 ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY PHE SEQRES 7 A 166 LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE GLU SEQRES 8 A 166 ASP ILE HIS GLN TYR ARG GLU GLN ILE LYS ARG VAL LYS SEQRES 9 A 166 ASP SER ASP ASP VAL PRO MET VAL LEU VAL GLY ASN LYS SEQRES 10 A 166 CYS ASP LEU ALA ALA ARG THR VAL GLU SER ARG GLN ALA SEQRES 11 A 166 GLN ASP LEU ALA ARG SER TYR GLY ILE PRO TYR ILE GLU SEQRES 12 A 166 THR SER ALA LYS THR ARG GLN GLY VAL GLU ASP ALA PHE SEQRES 13 A 166 TYR THR LEU VAL ARG GLU ILE ARG GLN HIS HET GNP A 201 32 HET CA A 202 1 HET MG A 203 1 HET CA A 204 1 HET MG A 205 1 HET ACT A 206 4 HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER HETNAM CA CALCIUM ION HETNAM MG MAGNESIUM ION HETNAM ACT ACETATE ION FORMUL 2 GNP C10 H17 N6 O13 P3 FORMUL 3 CA 2(CA 2+) FORMUL 4 MG 2(MG 2+) FORMUL 7 ACT C2 H3 O2 1- FORMUL 8 HOH *142(H2 O) HELIX 1 1 GLY A 15 ASN A 26 1 12 HELIX 2 2 GLN A 61 ALA A 66 5 6 HELIX 3 3 MET A 67 GLY A 75 1 9 HELIX 4 4 ASN A 86 ASP A 105 1 20 HELIX 5 5 GLU A 126 GLY A 138 1 13 HELIX 6 6 GLY A 151 ARG A 164 1 14 SHEET 1 A 6 GLU A 37 ILE A 46 0 SHEET 2 A 6 GLU A 49 THR A 58 -1 O ASP A 57 N ASP A 38 SHEET 3 A 6 THR A 2 VAL A 9 1 N TYR A 4 O LEU A 52 SHEET 4 A 6 GLY A 77 ALA A 83 1 O VAL A 81 N VAL A 9 SHEET 5 A 6 MET A 111 ASN A 116 1 O ASN A 116 N PHE A 82 SHEET 6 A 6 TYR A 141 GLU A 143 1 O ILE A 142 N LEU A 113 LINK OG SER A 17 MG MG A 203 1555 1555 2.14 LINK O PHE A 28 CA CA A 202 1555 1555 2.35 LINK OD1 ASP A 30 CA CA A 202 1555 1555 2.42 LINK OG1 THR A 35 MG MG A 203 1555 1555 2.21 LINK O ASP A 107 CA CA A 204 1555 1555 2.61 LINK O TYR A 137 CA CA A 204 1555 1555 2.44 LINK O2B GNP A 201 MG MG A 203 1555 1555 2.09 LINK O2G GNP A 201 MG MG A 203 1555 1555 2.13 LINK CA CA A 202 O HOH A 307 1555 1555 2.48 LINK CA CA A 202 O HOH A 406 1555 1555 2.57 LINK MG MG A 203 O HOH A 301 1555 1555 2.24 LINK MG MG A 203 O HOH A 398 1555 1555 2.09 LINK CA CA A 204 OXT ACT A 206 1555 1555 2.59 LINK CA CA A 204 O ACT A 206 1555 1555 2.79 LINK CA CA A 204 O HOH A 366 1555 1555 2.59 LINK CA CA A 204 O HOH A 414 1555 1555 2.64 LINK MG MG A 205 O HOH A 336 1555 1555 2.62 LINK MG MG A 205 O HOH A 353 1555 1555 2.45 LINK MG MG A 205 O HOH A 423 1555 1555 2.86 SITE 1 AC1 29 GLY A 12 GLY A 13 VAL A 14 GLY A 15 SITE 2 AC1 29 LYS A 16 SER A 17 ALA A 18 PHE A 28 SITE 3 AC1 29 VAL A 29 ASP A 30 GLU A 31 TYR A 32 SITE 4 AC1 29 PRO A 34 THR A 35 GLY A 60 ASN A 116 SITE 5 AC1 29 LYS A 117 ASP A 119 LEU A 120 SER A 145 SITE 6 AC1 29 ALA A 146 LYS A 147 MG A 203 HOH A 301 SITE 7 AC1 29 HOH A 303 HOH A 329 HOH A 365 HOH A 396 SITE 8 AC1 29 HOH A 398 SITE 1 AC2 6 PHE A 28 ASP A 30 GLU A 31 ASP A 33 SITE 2 AC2 6 HOH A 307 HOH A 406 SITE 1 AC3 5 SER A 17 THR A 35 GNP A 201 HOH A 301 SITE 2 AC3 5 HOH A 398 SITE 1 AC4 5 ASP A 107 TYR A 137 ACT A 206 HOH A 366 SITE 2 AC4 5 HOH A 414 SITE 1 AC5 3 HOH A 336 HOH A 353 HOH A 423 SITE 1 AC6 8 ARG A 97 LYS A 101 ASP A 107 ASP A 108 SITE 2 AC6 8 VAL A 109 MET A 111 CA A 204 HOH A 366 CRYST1 88.704 88.704 134.360 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011273 0.006509 0.000000 0.00000 SCALE2 0.000000 0.013017 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007443 0.00000