data_4DND # _entry.id 4DND # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4DND RCSB RCSB070544 WWPDB D_1000070544 # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id NYSGRC-012365 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 4DND _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-02-08 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Malashkevich, V.N.' 1 'Bhosle, R.' 2 'Toro, R.' 3 'Seidel, R.' 4 'Almo, S.C.' 5 'New York Structural Genomics Research Consortium (NYSGRC)' 6 # _citation.id primary _citation.title 'Crystal structure of syntaxin 10 from Homo sapiens' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Malashkevich, V.N.' 1 primary 'Bhosle, R.' 2 primary 'Toro, R.' 3 primary 'Seidel, R.' 4 primary 'Almo, S.C.' 5 # _cell.length_a 22.186 _cell.length_b 58.733 _cell.length_c 36.518 _cell.angle_alpha 90.000 _cell.angle_beta 100.210 _cell.angle_gamma 90.000 _cell.entry_id 4DND _cell.pdbx_unique_axis ? _cell.Z_PDB 2 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 4DND _symmetry.Int_Tables_number 4 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Syntaxin-10 15318.346 1 ? ? 'Cytoplasmic Topological domain residues 1-108' ? 2 water nat water 18.015 120 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Syn10 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)HHHHHHSSGVDLGTENLYFQS(MSE)SLEDPFFVVRGEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNEL RNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDLQERKVFVER(MSE)REAVQE(MSE)KDH(MSE)VS ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHSSGVDLGTENLYFQSMSLEDPFFVVRGEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIE WDLEDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAVQEMKDHMVS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier NYSGRC-012365 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 VAL n 1 12 ASP n 1 13 LEU n 1 14 GLY n 1 15 THR n 1 16 GLU n 1 17 ASN n 1 18 LEU n 1 19 TYR n 1 20 PHE n 1 21 GLN n 1 22 SER n 1 23 MSE n 1 24 SER n 1 25 LEU n 1 26 GLU n 1 27 ASP n 1 28 PRO n 1 29 PHE n 1 30 PHE n 1 31 VAL n 1 32 VAL n 1 33 ARG n 1 34 GLY n 1 35 GLU n 1 36 VAL n 1 37 GLN n 1 38 LYS n 1 39 ALA n 1 40 VAL n 1 41 ASN n 1 42 THR n 1 43 ALA n 1 44 ARG n 1 45 GLY n 1 46 LEU n 1 47 TYR n 1 48 GLN n 1 49 ARG n 1 50 TRP n 1 51 CYS n 1 52 GLU n 1 53 LEU n 1 54 LEU n 1 55 GLN n 1 56 GLU n 1 57 SER n 1 58 ALA n 1 59 ALA n 1 60 VAL n 1 61 GLY n 1 62 ARG n 1 63 GLU n 1 64 GLU n 1 65 LEU n 1 66 ASP n 1 67 TRP n 1 68 THR n 1 69 THR n 1 70 ASN n 1 71 GLU n 1 72 LEU n 1 73 ARG n 1 74 ASN n 1 75 GLY n 1 76 LEU n 1 77 ARG n 1 78 SER n 1 79 ILE n 1 80 GLU n 1 81 TRP n 1 82 ASP n 1 83 LEU n 1 84 GLU n 1 85 ASP n 1 86 LEU n 1 87 GLU n 1 88 GLU n 1 89 THR n 1 90 ILE n 1 91 GLY n 1 92 ILE n 1 93 VAL n 1 94 GLU n 1 95 ALA n 1 96 ASN n 1 97 PRO n 1 98 GLY n 1 99 LYS n 1 100 PHE n 1 101 LYS n 1 102 LEU n 1 103 PRO n 1 104 ALA n 1 105 GLY n 1 106 ASP n 1 107 LEU n 1 108 GLN n 1 109 GLU n 1 110 ARG n 1 111 LYS n 1 112 VAL n 1 113 PHE n 1 114 VAL n 1 115 GLU n 1 116 ARG n 1 117 MSE n 1 118 ARG n 1 119 GLU n 1 120 ALA n 1 121 VAL n 1 122 GLN n 1 123 GLU n 1 124 MSE n 1 125 LYS n 1 126 ASP n 1 127 HIS n 1 128 MSE n 1 129 VAL n 1 130 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'AAC05087.1, STX10, SYN10' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain Bronx _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)CODON+RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'BC-PSGX3(BC)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code STX10_HUMAN _struct_ref.pdbx_db_accession O60499 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSLEDPFFVVRGEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKL PAGDLQERKVFVERMREAVQEMKDHMVS ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4DND _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 23 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 130 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O60499 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 108 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 108 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4DND MSE A 1 ? UNP O60499 ? ? 'EXPRESSION TAG' -21 1 1 4DND HIS A 2 ? UNP O60499 ? ? 'EXPRESSION TAG' -20 2 1 4DND HIS A 3 ? UNP O60499 ? ? 'EXPRESSION TAG' -19 3 1 4DND HIS A 4 ? UNP O60499 ? ? 'EXPRESSION TAG' -18 4 1 4DND HIS A 5 ? UNP O60499 ? ? 'EXPRESSION TAG' -17 5 1 4DND HIS A 6 ? UNP O60499 ? ? 'EXPRESSION TAG' -16 6 1 4DND HIS A 7 ? UNP O60499 ? ? 'EXPRESSION TAG' -15 7 1 4DND SER A 8 ? UNP O60499 ? ? 'EXPRESSION TAG' -14 8 1 4DND SER A 9 ? UNP O60499 ? ? 'EXPRESSION TAG' -13 9 1 4DND GLY A 10 ? UNP O60499 ? ? 'EXPRESSION TAG' -12 10 1 4DND VAL A 11 ? UNP O60499 ? ? 'EXPRESSION TAG' -11 11 1 4DND ASP A 12 ? UNP O60499 ? ? 'EXPRESSION TAG' -10 12 1 4DND LEU A 13 ? UNP O60499 ? ? 'EXPRESSION TAG' -9 13 1 4DND GLY A 14 ? UNP O60499 ? ? 'EXPRESSION TAG' -8 14 1 4DND THR A 15 ? UNP O60499 ? ? 'EXPRESSION TAG' -7 15 1 4DND GLU A 16 ? UNP O60499 ? ? 'EXPRESSION TAG' -6 16 1 4DND ASN A 17 ? UNP O60499 ? ? 'EXPRESSION TAG' -5 17 1 4DND LEU A 18 ? UNP O60499 ? ? 'EXPRESSION TAG' -4 18 1 4DND TYR A 19 ? UNP O60499 ? ? 'EXPRESSION TAG' -3 19 1 4DND PHE A 20 ? UNP O60499 ? ? 'EXPRESSION TAG' -2 20 1 4DND GLN A 21 ? UNP O60499 ? ? 'EXPRESSION TAG' -1 21 1 4DND SER A 22 ? UNP O60499 ? ? 'EXPRESSION TAG' 0 22 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4DND _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.56 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 21.26 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '30% PEG400, 0.1M Tris pH 8.5, 0.2M MgCl2, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2011-12-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9791 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_wavelength_list 0.9791 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A # _reflns.entry_id 4DND _reflns.d_resolution_high 1.400 _reflns.d_resolution_low 50.000 _reflns.number_obs 18149 _reflns.pdbx_Rmerge_I_obs 0.046 _reflns.pdbx_netI_over_sigmaI 14.900 _reflns.pdbx_chi_squared 1.460 _reflns.pdbx_redundancy 2.800 _reflns.percent_possible_obs 94.100 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.400 1.420 ? ? ? 0.511 ? ? 0.797 2.500 ? 1302 75.600 1 1 1.420 1.450 ? ? ? 0.378 ? ? 0.790 2.700 ? 1675 92.300 2 1 1.450 1.480 ? ? ? 0.334 ? ? 0.830 2.800 ? 1758 95.100 3 1 1.480 1.510 ? ? ? 0.250 ? ? 0.911 2.900 ? 1707 96.300 4 1 1.510 1.540 ? ? ? 0.198 ? ? 0.856 2.900 ? 1687 95.900 5 1 1.540 1.580 ? ? ? 0.183 ? ? 0.902 2.900 ? 1784 96.600 6 1 1.580 1.620 ? ? ? 0.142 ? ? 0.938 2.900 ? 1694 97.500 7 1 1.620 1.660 ? ? ? 0.113 ? ? 0.955 2.900 ? 1735 96.500 8 1 1.660 1.710 ? ? ? 0.110 ? ? 1.051 2.900 ? 1795 96.700 9 1 1.710 1.760 ? ? ? 0.091 ? ? 1.054 2.900 ? 1692 97.600 10 1 1.760 1.830 ? ? ? 0.077 ? ? 1.105 2.900 ? 1797 98.000 11 1 1.830 1.900 ? ? ? 0.066 ? ? 1.225 2.900 ? 1733 98.000 12 1 1.900 1.990 ? ? ? 0.049 ? ? 1.303 2.900 ? 1770 98.100 13 1 1.990 2.090 ? ? ? 0.045 ? ? 1.620 2.900 ? 1767 98.100 14 1 2.090 2.220 ? ? ? 0.039 ? ? 1.746 2.900 ? 1785 98.800 15 1 2.220 2.390 ? ? ? 0.040 ? ? 2.185 2.900 ? 1761 99.000 16 1 2.390 2.630 ? ? ? 0.039 ? ? 2.643 2.800 ? 1766 98.900 17 1 2.630 3.020 ? ? ? 0.036 ? ? 2.754 2.800 ? 1756 97.400 18 1 3.020 3.800 ? ? ? 0.035 ? ? 2.998 2.600 ? 1517 84.800 19 1 3.800 50.000 ? ? ? 0.038 ? ? 3.344 2.600 ? 1272 70.200 20 1 # _refine.entry_id 4DND _refine.ls_d_res_high 1.4000 _refine.ls_d_res_low 17.5200 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 95.2500 _refine.ls_number_reflns_obs 17283 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT U VALUES : RESIDUAL ONLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1638 _refine.ls_R_factor_R_work 0.1620 _refine.ls_wR_factor_R_work 0.1692 _refine.ls_R_factor_R_free 0.1996 _refine.ls_wR_factor_R_free 0.2122 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 879 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 22.7954 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.0100 _refine.aniso_B[2][2] 0.0200 _refine.aniso_B[3][3] 0.0000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9650 _refine.correlation_coeff_Fo_to_Fc_free 0.9550 _refine.overall_SU_R_Cruickshank_DPI 0.0799 _refine.overall_SU_R_free 0.0706 _refine.pdbx_overall_ESU_R 0.0780 _refine.pdbx_overall_ESU_R_Free 0.0680 _refine.overall_SU_ML 0.0430 _refine.overall_SU_B 2.4000 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8781 _refine.B_iso_max 53.310 _refine.B_iso_min 10.540 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 782 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 120 _refine_hist.number_atoms_total 902 _refine_hist.d_res_high 1.4000 _refine_hist.d_res_low 17.5200 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 805 0.008 0.019 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1085 1.199 1.970 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 96 3.721 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 45 33.727 24.444 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 140 11.528 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 8 19.567 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 116 0.067 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 612 0.004 0.021 ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 805 2.987 3.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_free 37 18.600 5.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded 873 10.694 5.000 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.4010 _refine_ls_shell.d_res_low 1.4370 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 91.5700 _refine_ls_shell.number_reflns_R_work 1108 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2290 _refine_ls_shell.R_factor_R_free 0.2720 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 76 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1184 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4DND _struct.title 'Crystal structure of syntaxin 10 from Homo sapiens' _struct.pdbx_descriptor Syntaxin-10 _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DND _struct_keywords.text ;STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, NYSGRC, PSI-Biology, New York Structural Genomics Research Consortium, TRANSPORT PROTEIN ; _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 28 ? LEU A 53 ? PRO A 6 LEU A 31 1 ? 26 HELX_P HELX_P2 2 GLU A 64 ? ASN A 96 ? GLU A 42 ASN A 74 1 ? 33 HELX_P HELX_P3 3 ASN A 96 ? LYS A 101 ? ASN A 74 LYS A 79 1 ? 6 HELX_P HELX_P4 4 PRO A 103 ? VAL A 129 ? PRO A 81 VAL A 107 1 ? 27 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ARG 116 C ? ? ? 1_555 A MSE 117 N ? ? A ARG 94 A MSE 95 1_555 ? ? ? ? ? ? ? 1.330 ? covale2 covale ? ? A MSE 117 C ? ? ? 1_555 A ARG 118 N ? ? A MSE 95 A ARG 96 1_555 ? ? ? ? ? ? ? 1.338 ? covale3 covale ? ? A GLU 123 C ? ? ? 1_555 A MSE 124 N ? ? A GLU 101 A MSE 102 1_555 ? ? ? ? ? ? ? 1.329 ? covale4 covale ? ? A MSE 124 C ? ? ? 1_555 A LYS 125 N ? ? A MSE 102 A LYS 103 1_555 ? ? ? ? ? ? ? 1.327 ? covale5 covale ? ? A HIS 127 C ? ? ? 1_555 A MSE 128 N ? ? A HIS 105 A MSE 106 1_555 ? ? ? ? ? ? ? 1.331 ? covale6 covale ? ? A MSE 128 C ? ? ? 1_555 A VAL 129 N ? ? A MSE 106 A VAL 107 1_555 ? ? ? ? ? ? ? 1.332 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 4DND _atom_sites.fract_transf_matrix[1][1] 0.045073 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008114 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017026 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027824 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -21 ? ? ? A . n A 1 2 HIS 2 -20 ? ? ? A . n A 1 3 HIS 3 -19 ? ? ? A . n A 1 4 HIS 4 -18 ? ? ? A . n A 1 5 HIS 5 -17 ? ? ? A . n A 1 6 HIS 6 -16 ? ? ? A . n A 1 7 HIS 7 -15 ? ? ? A . n A 1 8 SER 8 -14 ? ? ? A . n A 1 9 SER 9 -13 ? ? ? A . n A 1 10 GLY 10 -12 ? ? ? A . n A 1 11 VAL 11 -11 ? ? ? A . n A 1 12 ASP 12 -10 ? ? ? A . n A 1 13 LEU 13 -9 ? ? ? A . n A 1 14 GLY 14 -8 ? ? ? A . n A 1 15 THR 15 -7 ? ? ? A . n A 1 16 GLU 16 -6 ? ? ? A . n A 1 17 ASN 17 -5 ? ? ? A . n A 1 18 LEU 18 -4 ? ? ? A . n A 1 19 TYR 19 -3 ? ? ? A . n A 1 20 PHE 20 -2 ? ? ? A . n A 1 21 GLN 21 -1 ? ? ? A . n A 1 22 SER 22 0 ? ? ? A . n A 1 23 MSE 23 1 ? ? ? A . n A 1 24 SER 24 2 ? ? ? A . n A 1 25 LEU 25 3 ? ? ? A . n A 1 26 GLU 26 4 ? ? ? A . n A 1 27 ASP 27 5 5 ASP ASP A . n A 1 28 PRO 28 6 6 PRO PRO A . n A 1 29 PHE 29 7 7 PHE PHE A . n A 1 30 PHE 30 8 8 PHE PHE A . n A 1 31 VAL 31 9 9 VAL VAL A . n A 1 32 VAL 32 10 10 VAL VAL A . n A 1 33 ARG 33 11 11 ARG ARG A . n A 1 34 GLY 34 12 12 GLY GLY A . n A 1 35 GLU 35 13 13 GLU GLU A . n A 1 36 VAL 36 14 14 VAL VAL A . n A 1 37 GLN 37 15 15 GLN GLN A . n A 1 38 LYS 38 16 16 LYS LYS A . n A 1 39 ALA 39 17 17 ALA ALA A . n A 1 40 VAL 40 18 18 VAL VAL A . n A 1 41 ASN 41 19 19 ASN ASN A . n A 1 42 THR 42 20 20 THR THR A . n A 1 43 ALA 43 21 21 ALA ALA A . n A 1 44 ARG 44 22 22 ARG ARG A . n A 1 45 GLY 45 23 23 GLY GLY A . n A 1 46 LEU 46 24 24 LEU LEU A . n A 1 47 TYR 47 25 25 TYR TYR A . n A 1 48 GLN 48 26 26 GLN GLN A . n A 1 49 ARG 49 27 27 ARG ARG A . n A 1 50 TRP 50 28 28 TRP TRP A . n A 1 51 CYS 51 29 29 CYS CYS A . n A 1 52 GLU 52 30 30 GLU GLU A . n A 1 53 LEU 53 31 31 LEU LEU A . n A 1 54 LEU 54 32 ? ? ? A . n A 1 55 GLN 55 33 ? ? ? A . n A 1 56 GLU 56 34 ? ? ? A . n A 1 57 SER 57 35 ? ? ? A . n A 1 58 ALA 58 36 ? ? ? A . n A 1 59 ALA 59 37 ? ? ? A . n A 1 60 VAL 60 38 ? ? ? A . n A 1 61 GLY 61 39 ? ? ? A . n A 1 62 ARG 62 40 ? ? ? A . n A 1 63 GLU 63 41 41 GLU GLU A . n A 1 64 GLU 64 42 42 GLU GLU A . n A 1 65 LEU 65 43 43 LEU LEU A . n A 1 66 ASP 66 44 44 ASP ASP A . n A 1 67 TRP 67 45 45 TRP TRP A . n A 1 68 THR 68 46 46 THR THR A . n A 1 69 THR 69 47 47 THR THR A . n A 1 70 ASN 70 48 48 ASN ASN A . n A 1 71 GLU 71 49 49 GLU GLU A . n A 1 72 LEU 72 50 50 LEU LEU A . n A 1 73 ARG 73 51 51 ARG ARG A . n A 1 74 ASN 74 52 52 ASN ASN A . n A 1 75 GLY 75 53 53 GLY GLY A . n A 1 76 LEU 76 54 54 LEU LEU A . n A 1 77 ARG 77 55 55 ARG ARG A . n A 1 78 SER 78 56 56 SER SER A . n A 1 79 ILE 79 57 57 ILE ILE A . n A 1 80 GLU 80 58 58 GLU GLU A . n A 1 81 TRP 81 59 59 TRP TRP A . n A 1 82 ASP 82 60 60 ASP ASP A . n A 1 83 LEU 83 61 61 LEU LEU A . n A 1 84 GLU 84 62 62 GLU GLU A . n A 1 85 ASP 85 63 63 ASP ASP A . n A 1 86 LEU 86 64 64 LEU LEU A . n A 1 87 GLU 87 65 65 GLU GLU A . n A 1 88 GLU 88 66 66 GLU GLU A . n A 1 89 THR 89 67 67 THR THR A . n A 1 90 ILE 90 68 68 ILE ILE A . n A 1 91 GLY 91 69 69 GLY GLY A . n A 1 92 ILE 92 70 70 ILE ILE A . n A 1 93 VAL 93 71 71 VAL VAL A . n A 1 94 GLU 94 72 72 GLU GLU A . n A 1 95 ALA 95 73 73 ALA ALA A . n A 1 96 ASN 96 74 74 ASN ASN A . n A 1 97 PRO 97 75 75 PRO PRO A . n A 1 98 GLY 98 76 76 GLY GLY A . n A 1 99 LYS 99 77 77 LYS LYS A . n A 1 100 PHE 100 78 78 PHE PHE A . n A 1 101 LYS 101 79 79 LYS LYS A . n A 1 102 LEU 102 80 80 LEU LEU A . n A 1 103 PRO 103 81 81 PRO PRO A . n A 1 104 ALA 104 82 82 ALA ALA A . n A 1 105 GLY 105 83 83 GLY GLY A . n A 1 106 ASP 106 84 84 ASP ASP A . n A 1 107 LEU 107 85 85 LEU LEU A . n A 1 108 GLN 108 86 86 GLN GLN A . n A 1 109 GLU 109 87 87 GLU GLU A . n A 1 110 ARG 110 88 88 ARG ARG A . n A 1 111 LYS 111 89 89 LYS LYS A . n A 1 112 VAL 112 90 90 VAL VAL A . n A 1 113 PHE 113 91 91 PHE PHE A . n A 1 114 VAL 114 92 92 VAL VAL A . n A 1 115 GLU 115 93 93 GLU GLU A . n A 1 116 ARG 116 94 94 ARG ARG A . n A 1 117 MSE 117 95 95 MSE MSE A . n A 1 118 ARG 118 96 96 ARG ARG A . n A 1 119 GLU 119 97 97 GLU GLU A . n A 1 120 ALA 120 98 98 ALA ALA A . n A 1 121 VAL 121 99 99 VAL VAL A . n A 1 122 GLN 122 100 100 GLN GLN A . n A 1 123 GLU 123 101 101 GLU GLU A . n A 1 124 MSE 124 102 102 MSE MSE A . n A 1 125 LYS 125 103 103 LYS LYS A . n A 1 126 ASP 126 104 104 ASP ASP A . n A 1 127 HIS 127 105 105 HIS HIS A . n A 1 128 MSE 128 106 106 MSE MSE A . n A 1 129 VAL 129 107 107 VAL VAL A . n A 1 130 SER 130 108 108 SER SER A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'New York Structural Genomics Research Consortium' _pdbx_SG_project.initial_of_center NYSGRC # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 117 A MSE 95 ? MET SELENOMETHIONINE 2 A MSE 124 A MSE 102 ? MET SELENOMETHIONINE 3 A MSE 128 A MSE 106 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2012-02-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.400 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 33753 _diffrn_reflns.pdbx_Rmerge_I_obs 0.046 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.46 _diffrn_reflns.av_sigmaI_over_netI 31.76 _diffrn_reflns.pdbx_redundancy 2.80 _diffrn_reflns.pdbx_percent_possible_obs 94.10 _diffrn_reflns.number 95400 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 3.80 50.00 ? ? 0.038 ? 3.344 2.60 70.20 1 3.02 3.80 ? ? 0.035 ? 2.998 2.60 84.80 1 2.63 3.02 ? ? 0.036 ? 2.754 2.80 97.40 1 2.39 2.63 ? ? 0.039 ? 2.643 2.80 98.90 1 2.22 2.39 ? ? 0.040 ? 2.185 2.90 99.00 1 2.09 2.22 ? ? 0.039 ? 1.746 2.90 98.80 1 1.99 2.09 ? ? 0.045 ? 1.620 2.90 98.10 1 1.90 1.99 ? ? 0.049 ? 1.303 2.90 98.10 1 1.83 1.90 ? ? 0.066 ? 1.225 2.90 98.00 1 1.76 1.83 ? ? 0.077 ? 1.105 2.90 98.00 1 1.71 1.76 ? ? 0.091 ? 1.054 2.90 97.60 1 1.66 1.71 ? ? 0.110 ? 1.051 2.90 96.70 1 1.62 1.66 ? ? 0.113 ? 0.955 2.90 96.50 1 1.58 1.62 ? ? 0.142 ? 0.938 2.90 97.50 1 1.54 1.58 ? ? 0.183 ? 0.902 2.90 96.60 1 1.51 1.54 ? ? 0.198 ? 0.856 2.90 95.90 1 1.48 1.51 ? ? 0.250 ? 0.911 2.90 96.30 1 1.45 1.48 ? ? 0.334 ? 0.830 2.80 95.10 1 1.42 1.45 ? ? 0.378 ? 0.790 2.70 92.30 1 1.40 1.42 ? ? 0.511 ? 0.797 2.50 75.60 # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -0.1801 _pdbx_refine_tls.origin_y -0.6410 _pdbx_refine_tls.origin_z 11.2748 _pdbx_refine_tls.T[1][1] 0.0158 _pdbx_refine_tls.T[2][2] 0.0007 _pdbx_refine_tls.T[3][3] 0.0153 _pdbx_refine_tls.T[1][2] 0.0004 _pdbx_refine_tls.T[1][3] 0.0027 _pdbx_refine_tls.T[2][3] -0.0009 _pdbx_refine_tls.L[1][1] 0.6851 _pdbx_refine_tls.L[2][2] 0.7334 _pdbx_refine_tls.L[3][3] 1.1041 _pdbx_refine_tls.L[1][2] -0.2986 _pdbx_refine_tls.L[1][3] -0.5812 _pdbx_refine_tls.L[2][3] 0.6664 _pdbx_refine_tls.S[1][1] -0.0089 _pdbx_refine_tls.S[2][2] 0.0091 _pdbx_refine_tls.S[3][3] -0.0003 _pdbx_refine_tls.S[1][2] 0.0032 _pdbx_refine_tls.S[1][3] 0.0038 _pdbx_refine_tls.S[2][3] -0.0010 _pdbx_refine_tls.S[2][1] -0.0116 _pdbx_refine_tls.S[3][1] 0.0275 _pdbx_refine_tls.S[3][2] -0.0043 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 5 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 108 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method SAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 CBASS . ? ? ? ? 'data collection' ? ? ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -21 ? A MSE 1 2 1 Y 1 A HIS -20 ? A HIS 2 3 1 Y 1 A HIS -19 ? A HIS 3 4 1 Y 1 A HIS -18 ? A HIS 4 5 1 Y 1 A HIS -17 ? A HIS 5 6 1 Y 1 A HIS -16 ? A HIS 6 7 1 Y 1 A HIS -15 ? A HIS 7 8 1 Y 1 A SER -14 ? A SER 8 9 1 Y 1 A SER -13 ? A SER 9 10 1 Y 1 A GLY -12 ? A GLY 10 11 1 Y 1 A VAL -11 ? A VAL 11 12 1 Y 1 A ASP -10 ? A ASP 12 13 1 Y 1 A LEU -9 ? A LEU 13 14 1 Y 1 A GLY -8 ? A GLY 14 15 1 Y 1 A THR -7 ? A THR 15 16 1 Y 1 A GLU -6 ? A GLU 16 17 1 Y 1 A ASN -5 ? A ASN 17 18 1 Y 1 A LEU -4 ? A LEU 18 19 1 Y 1 A TYR -3 ? A TYR 19 20 1 Y 1 A PHE -2 ? A PHE 20 21 1 Y 1 A GLN -1 ? A GLN 21 22 1 Y 1 A SER 0 ? A SER 22 23 1 Y 1 A MSE 1 ? A MSE 23 24 1 Y 1 A SER 2 ? A SER 24 25 1 Y 1 A LEU 3 ? A LEU 25 26 1 Y 1 A GLU 4 ? A GLU 26 27 1 Y 1 A LEU 32 ? A LEU 54 28 1 Y 1 A GLN 33 ? A GLN 55 29 1 Y 1 A GLU 34 ? A GLU 56 30 1 Y 1 A SER 35 ? A SER 57 31 1 Y 1 A ALA 36 ? A ALA 58 32 1 Y 1 A ALA 37 ? A ALA 59 33 1 Y 1 A VAL 38 ? A VAL 60 34 1 Y 1 A GLY 39 ? A GLY 61 35 1 Y 1 A ARG 40 ? A ARG 62 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 201 1 HOH HOH A . B 2 HOH 2 202 2 HOH HOH A . B 2 HOH 3 203 3 HOH HOH A . B 2 HOH 4 204 4 HOH HOH A . B 2 HOH 5 205 5 HOH HOH A . B 2 HOH 6 206 6 HOH HOH A . B 2 HOH 7 207 7 HOH HOH A . B 2 HOH 8 208 8 HOH HOH A . B 2 HOH 9 209 9 HOH HOH A . B 2 HOH 10 210 13 HOH HOH A . B 2 HOH 11 211 15 HOH HOH A . B 2 HOH 12 212 16 HOH HOH A . B 2 HOH 13 213 17 HOH HOH A . B 2 HOH 14 214 18 HOH HOH A . B 2 HOH 15 215 19 HOH HOH A . B 2 HOH 16 216 20 HOH HOH A . B 2 HOH 17 217 21 HOH HOH A . B 2 HOH 18 218 22 HOH HOH A . B 2 HOH 19 219 23 HOH HOH A . B 2 HOH 20 220 26 HOH HOH A . B 2 HOH 21 221 27 HOH HOH A . B 2 HOH 22 222 28 HOH HOH A . B 2 HOH 23 223 29 HOH HOH A . B 2 HOH 24 224 30 HOH HOH A . B 2 HOH 25 225 31 HOH HOH A . B 2 HOH 26 226 33 HOH HOH A . B 2 HOH 27 227 34 HOH HOH A . B 2 HOH 28 228 35 HOH HOH A . B 2 HOH 29 229 36 HOH HOH A . B 2 HOH 30 230 37 HOH HOH A . B 2 HOH 31 231 38 HOH HOH A . B 2 HOH 32 232 41 HOH HOH A . B 2 HOH 33 233 42 HOH HOH A . B 2 HOH 34 234 43 HOH HOH A . B 2 HOH 35 235 45 HOH HOH A . B 2 HOH 36 236 47 HOH HOH A . B 2 HOH 37 237 49 HOH HOH A . B 2 HOH 38 238 50 HOH HOH A . B 2 HOH 39 239 51 HOH HOH A . B 2 HOH 40 240 52 HOH HOH A . B 2 HOH 41 241 53 HOH HOH A . B 2 HOH 42 242 55 HOH HOH A . B 2 HOH 43 243 56 HOH HOH A . B 2 HOH 44 244 57 HOH HOH A . B 2 HOH 45 245 58 HOH HOH A . B 2 HOH 46 246 59 HOH HOH A . B 2 HOH 47 247 60 HOH HOH A . B 2 HOH 48 248 61 HOH HOH A . B 2 HOH 49 249 63 HOH HOH A . B 2 HOH 50 250 65 HOH HOH A . B 2 HOH 51 251 66 HOH HOH A . B 2 HOH 52 252 67 HOH HOH A . B 2 HOH 53 253 70 HOH HOH A . B 2 HOH 54 254 72 HOH HOH A . B 2 HOH 55 255 73 HOH HOH A . B 2 HOH 56 256 74 HOH HOH A . B 2 HOH 57 257 75 HOH HOH A . B 2 HOH 58 258 77 HOH HOH A . B 2 HOH 59 259 78 HOH HOH A . B 2 HOH 60 260 79 HOH HOH A . B 2 HOH 61 261 81 HOH HOH A . B 2 HOH 62 262 82 HOH HOH A . B 2 HOH 63 263 83 HOH HOH A . B 2 HOH 64 264 84 HOH HOH A . B 2 HOH 65 265 85 HOH HOH A . B 2 HOH 66 266 87 HOH HOH A . B 2 HOH 67 267 88 HOH HOH A . B 2 HOH 68 268 89 HOH HOH A . B 2 HOH 69 269 90 HOH HOH A . B 2 HOH 70 270 91 HOH HOH A . B 2 HOH 71 271 92 HOH HOH A . B 2 HOH 72 272 93 HOH HOH A . B 2 HOH 73 273 94 HOH HOH A . B 2 HOH 74 274 95 HOH HOH A . B 2 HOH 75 275 96 HOH HOH A . B 2 HOH 76 276 97 HOH HOH A . B 2 HOH 77 277 98 HOH HOH A . B 2 HOH 78 278 99 HOH HOH A . B 2 HOH 79 279 100 HOH HOH A . B 2 HOH 80 280 101 HOH HOH A . B 2 HOH 81 281 102 HOH HOH A . B 2 HOH 82 282 104 HOH HOH A . B 2 HOH 83 283 105 HOH HOH A . B 2 HOH 84 284 106 HOH HOH A . B 2 HOH 85 285 107 HOH HOH A . B 2 HOH 86 286 108 HOH HOH A . B 2 HOH 87 287 109 HOH HOH A . B 2 HOH 88 288 110 HOH HOH A . B 2 HOH 89 289 111 HOH HOH A . B 2 HOH 90 290 112 HOH HOH A . B 2 HOH 91 291 113 HOH HOH A . B 2 HOH 92 292 114 HOH HOH A . B 2 HOH 93 293 115 HOH HOH A . B 2 HOH 94 294 116 HOH HOH A . B 2 HOH 95 295 117 HOH HOH A . B 2 HOH 96 296 118 HOH HOH A . B 2 HOH 97 297 119 HOH HOH A . B 2 HOH 98 298 120 HOH HOH A . B 2 HOH 99 299 121 HOH HOH A . B 2 HOH 100 300 122 HOH HOH A . B 2 HOH 101 301 123 HOH HOH A . B 2 HOH 102 302 124 HOH HOH A . B 2 HOH 103 303 125 HOH HOH A . B 2 HOH 104 304 126 HOH HOH A . B 2 HOH 105 305 127 HOH HOH A . B 2 HOH 106 306 128 HOH HOH A . B 2 HOH 107 307 129 HOH HOH A . B 2 HOH 108 308 130 HOH HOH A . B 2 HOH 109 309 131 HOH HOH A . B 2 HOH 110 310 132 HOH HOH A . B 2 HOH 111 311 133 HOH HOH A . B 2 HOH 112 312 134 HOH HOH A . B 2 HOH 113 313 135 HOH HOH A . B 2 HOH 114 314 136 HOH HOH A . B 2 HOH 115 315 137 HOH HOH A . B 2 HOH 116 316 138 HOH HOH A . B 2 HOH 117 317 139 HOH HOH A . B 2 HOH 118 318 140 HOH HOH A . B 2 HOH 119 319 141 HOH HOH A . B 2 HOH 120 320 142 HOH HOH A . #