HEADER HYDROLASE 09-FEB-12 4DOE TITLE THE LIGANDED STRUCTURE OF CBESCII CELA GH9 MODULE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1,4-BETA-GLUCANASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CBESCII CELA GH9 MODULE (UNP RESIDUES 1-452); COMPND 5 EC: 3.2.1.4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CALDICELLULOSIRUPTOR BESCII; SOURCE 3 ORGANISM_TAXID: 31899; SOURCE 4 GENE: CELA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CELA, GH9, CELLULASE, (A/A)6 BARREL, GLYCOSIDE HYDROLASE, CELLOBIOSE, KEYWDS 2 CELLOTRIOSE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.M.ALAHUHTA,V.V.LUNIN REVDAT 5 13-SEP-23 4DOE 1 HETSYN REVDAT 4 29-JUL-20 4DOE 1 COMPND REMARK SEQADV HET REVDAT 4 2 1 HETNAM HETSYN FORMUL LINK REVDAT 4 3 1 SITE ATOM REVDAT 3 08-JAN-14 4DOE 1 JRNL REVDAT 2 18-DEC-13 4DOE 1 JRNL REVDAT 1 20-FEB-13 4DOE 0 JRNL AUTH R.BRUNECKY,M.ALAHUHTA,Q.XU,B.S.DONOHOE,M.F.CROWLEY, JRNL AUTH 2 I.A.KATAEVA,S.J.YANG,M.G.RESCH,M.W.ADAMS,V.V.LUNIN, JRNL AUTH 3 M.E.HIMMEL,Y.J.BOMBLE JRNL TITL REVEALING NATURE'S CELLULASE DIVERSITY: THE DIGESTION JRNL TITL 2 MECHANISM OF CALDICELLULOSIRUPTOR BESCII CELA. JRNL REF SCIENCE V. 342 1513 2013 JRNL REFN ISSN 0036-8075 JRNL PMID 24357319 JRNL DOI 10.1126/SCIENCE.1244273 REMARK 2 REMARK 2 RESOLUTION. 1.56 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.56 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.62 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 97342 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.149 REMARK 3 R VALUE (WORKING SET) : 0.148 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5109 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.56 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.60 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6238 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.64 REMARK 3 BIN R VALUE (WORKING SET) : 0.3190 REMARK 3 BIN FREE R VALUE SET COUNT : 322 REMARK 3 BIN FREE R VALUE : 0.3510 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3613 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 219 REMARK 3 SOLVENT ATOMS : 704 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.27000 REMARK 3 B22 (A**2) : 0.27000 REMARK 3 B33 (A**2) : -0.41000 REMARK 3 B12 (A**2) : 0.14000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.059 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.063 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.043 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.270 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4243 ; 0.019 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2879 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5757 ; 2.028 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6985 ; 1.078 ; 3.005 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 517 ; 6.445 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 195 ;38.557 ;24.256 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 616 ;14.201 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;19.406 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 590 ; 0.207 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4766 ; 0.016 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 919 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4DOE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000070581. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JAN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : HELIOS MIRRORS REMARK 200 OPTICS : HELIOS MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER PLATINUM 135 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : PROTEUM PLUS PLUS REMARK 200 DATA SCALING SOFTWARE : PROTEUM PLUS PLUS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 103276 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.560 REMARK 200 RESOLUTION RANGE LOW (A) : 25.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 16.06 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.12250 REMARK 200 FOR THE DATA SET : 15.7300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.56 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.8 REMARK 200 DATA REDUNDANCY IN SHELL : 8.27 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.67460 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1KSD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M AMMONIUM SULFATE, 0.1 M MES REMARK 280 MONOHYDRATE PH 6.5, 10% V/V 1,4-DIOXANE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 19.69933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 39.39867 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 39.39867 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 19.69933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLY A 13 REMARK 465 LEU A 14 REMARK 465 VAL A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 HIS A 20 REMARK 465 MET A 21 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 381 O ASN A 390 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 124 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 LEU A 189 CB - CG - CD2 ANGL. DEV. = 10.9 DEGREES REMARK 500 ASP A 310 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 78 -120.34 -136.27 REMARK 500 HIS A 130 71.21 -118.41 REMARK 500 HIS A 130 72.01 -118.41 REMARK 500 LYS A 215 59.22 38.40 REMARK 500 TYR A 226 -57.58 -131.00 REMARK 500 TRP A 277 -146.43 -111.44 REMARK 500 THR A 313 -92.59 -119.20 REMARK 500 ASP A 430 -2.86 76.21 REMARK 500 ASP A 434 76.55 -110.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 56 0.09 SIDE CHAIN REMARK 500 ARG A 394 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASN A 390 -10.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 231 OG REMARK 620 2 GLY A 232 O 94.4 REMARK 620 3 ASP A 235 OD1 85.9 77.9 REMARK 620 4 ASP A 235 OD2 97.3 128.3 53.2 REMARK 620 5 GLU A 236 OE1 160.7 74.5 76.5 78.4 REMARK 620 6 GLU A 236 OE2 145.7 114.6 116.7 79.4 52.5 REMARK 620 7 ASP A 282 O 66.8 144.9 126.8 84.9 130.6 78.9 REMARK 620 8 HOH A 726 O 80.3 74.8 148.1 156.9 110.9 89.7 73.0 REMARK 620 N 1 2 3 4 5 6 7 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4DOD RELATED DB: PDB DBREF 4DOE A 24 475 UNP P96311 P96311_ANATH 1 452 SEQADV 4DOE MET A 1 UNP P96311 EXPRESSION TAG SEQADV 4DOE GLY A 2 UNP P96311 EXPRESSION TAG SEQADV 4DOE SER A 3 UNP P96311 EXPRESSION TAG SEQADV 4DOE SER A 4 UNP P96311 EXPRESSION TAG SEQADV 4DOE HIS A 5 UNP P96311 EXPRESSION TAG SEQADV 4DOE HIS A 6 UNP P96311 EXPRESSION TAG SEQADV 4DOE HIS A 7 UNP P96311 EXPRESSION TAG SEQADV 4DOE HIS A 8 UNP P96311 EXPRESSION TAG SEQADV 4DOE HIS A 9 UNP P96311 EXPRESSION TAG SEQADV 4DOE HIS A 10 UNP P96311 EXPRESSION TAG SEQADV 4DOE SER A 11 UNP P96311 EXPRESSION TAG SEQADV 4DOE SER A 12 UNP P96311 EXPRESSION TAG SEQADV 4DOE GLY A 13 UNP P96311 EXPRESSION TAG SEQADV 4DOE LEU A 14 UNP P96311 EXPRESSION TAG SEQADV 4DOE VAL A 15 UNP P96311 EXPRESSION TAG SEQADV 4DOE PRO A 16 UNP P96311 EXPRESSION TAG SEQADV 4DOE ARG A 17 UNP P96311 EXPRESSION TAG SEQADV 4DOE GLY A 18 UNP P96311 EXPRESSION TAG SEQADV 4DOE SER A 19 UNP P96311 EXPRESSION TAG SEQADV 4DOE HIS A 20 UNP P96311 EXPRESSION TAG SEQADV 4DOE MET A 21 UNP P96311 EXPRESSION TAG SEQADV 4DOE ALA A 22 UNP P96311 EXPRESSION TAG SEQADV 4DOE SER A 23 UNP P96311 EXPRESSION TAG SEQADV 4DOE ALA A 176 UNP P96311 THR 153 CONFLICT SEQADV 4DOE THR A 313 UNP P96311 ILE 290 CONFLICT SEQRES 1 A 475 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 475 LEU VAL PRO ARG GLY SER HIS MET ALA SER GLY SER PHE SEQRES 3 A 475 ASN TYR GLY GLU ALA LEU GLN LYS ALA ILE MET PHE TYR SEQRES 4 A 475 GLU PHE GLN MET SER GLY LYS LEU PRO ASN TRP VAL ARG SEQRES 5 A 475 ASN ASN TRP ARG GLY ASP SER ALA LEU LYS ASP GLY GLN SEQRES 6 A 475 ASP ASN GLY LEU ASP LEU THR GLY GLY TRP PHE ASP ALA SEQRES 7 A 475 GLY ASP HIS VAL LYS PHE ASN LEU PRO MET SER TYR THR SEQRES 8 A 475 GLY THR MET LEU SER TRP ALA VAL TYR GLU TYR LYS ASP SEQRES 9 A 475 ALA PHE VAL LYS SER GLY GLN LEU GLU HIS ILE LEU ASN SEQRES 10 A 475 GLN ILE GLU TRP VAL ASN ASP TYR PHE VAL LYS CYS HIS SEQRES 11 A 475 PRO SER LYS TYR VAL TYR TYR TYR GLN VAL GLY ASP GLY SEQRES 12 A 475 SER LYS ASP HIS ALA TRP TRP GLY PRO ALA GLU VAL MET SEQRES 13 A 475 GLN MET GLU ARG PRO SER PHE LYS VAL THR GLN SER SER SEQRES 14 A 475 PRO GLY SER THR VAL VAL ALA GLU THR ALA ALA SER LEU SEQRES 15 A 475 ALA ALA ALA SER ILE VAL LEU LYS ASP ARG ASN PRO THR SEQRES 16 A 475 LYS ALA ALA THR TYR LEU GLN HIS ALA LYS GLU LEU TYR SEQRES 17 A 475 GLU PHE ALA GLU VAL THR LYS SER ASP ALA GLY TYR THR SEQRES 18 A 475 ALA ALA ASN GLY TYR TYR ASN SER TRP SER GLY PHE TYR SEQRES 19 A 475 ASP GLU LEU SER TRP ALA ALA VAL TRP LEU TYR LEU ALA SEQRES 20 A 475 THR ASN ASP SER THR TYR LEU THR LYS ALA GLU SER TYR SEQRES 21 A 475 VAL GLN ASN TRP PRO LYS ILE SER GLY SER ASN THR ILE SEQRES 22 A 475 ASP TYR LYS TRP ALA HIS CYS TRP ASP ASP VAL HIS ASN SEQRES 23 A 475 GLY ALA ALA LEU LEU LEU ALA LYS ILE THR GLY LYS ASP SEQRES 24 A 475 ILE TYR LYS GLN ILE ILE GLU SER HIS LEU ASP TYR TRP SEQRES 25 A 475 THR THR GLY TYR ASN GLY GLU ARG ILE LYS TYR THR PRO SEQRES 26 A 475 LYS GLY LEU ALA TRP LEU ASP GLN TRP GLY SER LEU ARG SEQRES 27 A 475 TYR ALA THR THR THR ALA PHE LEU ALA PHE VAL TYR SER SEQRES 28 A 475 ASP TRP VAL GLY CYS PRO SER THR LYS LYS GLU ILE TYR SEQRES 29 A 475 ARG LYS PHE GLY GLU SER GLN ILE ASP TYR ALA LEU GLY SEQRES 30 A 475 SER ALA GLY ARG SER PHE VAL VAL GLY PHE GLY THR ASN SEQRES 31 A 475 PRO PRO LYS ARG PRO HIS HIS ARG THR ALA HIS SER SER SEQRES 32 A 475 TRP ALA ASP SER GLN SER ILE PRO SER TYR HIS ARG HIS SEQRES 33 A 475 THR LEU TYR GLY ALA LEU VAL GLY GLY PRO GLY SER ASP SEQRES 34 A 475 ASP SER TYR THR ASP ASP ILE SER ASN TYR VAL ASN ASN SEQRES 35 A 475 GLU VAL ALA CYS ASP TYR ASN ALA GLY PHE VAL GLY ALA SEQRES 36 A 475 LEU ALA LYS MET TYR GLN LEU TYR GLY GLY ASN PRO ILE SEQRES 37 A 475 PRO ASP PHE LYS ALA ILE GLU HET GLC B 1 14 HET BGC B 2 11 HET BGC C 1 12 HET BGC C 2 11 HET BGC C 3 11 HET DIO A 501 6 HET CA A 502 1 HET GOL A 505 6 HET GOL A 506 6 HET GOL A 507 6 HET GOL A 508 6 HET GOL A 509 6 HET GOL A 510 12 HET EDO A 511 4 HET EDO A 512 4 HET EDO A 513 8 HET EDO A 514 4 HET EDO A 515 4 HET EDO A 516 4 HET EDO A 517 4 HET EDO A 518 8 HET EDO A 519 4 HET EDO A 520 4 HET EDO A 521 4 HET EDO A 522 4 HET EDO A 523 4 HET EDO A 524 4 HET EDO A 525 4 HET EDO A 526 4 HET EDO A 527 4 HET EDO A 528 4 HET EDO A 529 4 HET EDO A 530 4 HET EDO A 531 4 HET EDO A 532 4 HET EDO A 533 4 HET EDO A 534 4 HET EDO A 535 4 HET EDO A 536 4 HET SO4 A 537 5 HET SO4 A 538 5 HET SO4 A 539 5 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM DIO 1,4-DIETHYLENE DIOXIDE HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETNAM SO4 SULFATE ION HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 GLC C6 H12 O6 FORMUL 2 BGC 4(C6 H12 O6) FORMUL 4 DIO C4 H8 O2 FORMUL 5 CA CA 2+ FORMUL 6 GOL 6(C3 H8 O3) FORMUL 12 EDO 26(C2 H6 O2) FORMUL 38 SO4 3(O4 S 2-) FORMUL 41 HOH *704(H2 O) HELIX 1 1 ASN A 27 GLN A 42 1 16 HELIX 2 2 GLY A 64 GLY A 68 5 5 HELIX 3 3 ASN A 85 SER A 109 1 25 HELIX 4 4 GLN A 111 CYS A 129 1 19 HELIX 5 5 ASP A 142 ALA A 148 1 7 HELIX 6 6 PRO A 152 MET A 156 5 5 HELIX 7 7 GLY A 171 LEU A 189 1 19 HELIX 8 8 ASN A 193 LYS A 215 1 23 HELIX 9 9 PHE A 233 ASN A 249 1 17 HELIX 10 10 ASP A 250 TYR A 260 1 11 HELIX 11 11 VAL A 261 TRP A 264 5 4 HELIX 12 12 VAL A 284 GLY A 297 1 14 HELIX 13 13 LYS A 298 TRP A 312 1 15 HELIX 14 14 GLY A 335 ASP A 352 1 18 HELIX 15 15 PRO A 357 GLY A 377 1 21 HELIX 16 16 HIS A 397 SER A 402 1 6 HELIX 17 17 ALA A 445 GLY A 464 1 20 SHEET 1 A 3 LYS A 83 PHE A 84 0 SHEET 2 A 3 VAL A 135 VAL A 140 -1 O VAL A 140 N LYS A 83 SHEET 3 A 3 SER A 162 THR A 166 -1 O VAL A 165 N TYR A 136 LINK O4 GLC B 1 C1 BGC B 2 1555 1555 1.40 LINK O4 BGC C 1 C1 BGC C 2 1555 1555 1.44 LINK O4 BGC C 2 C1 BGC C 3 1555 1555 1.41 LINK OG SER A 231 CA CA A 502 1555 1555 2.53 LINK O GLY A 232 CA CA A 502 1555 1555 2.31 LINK OD1 ASP A 235 CA CA A 502 1555 1555 2.49 LINK OD2 ASP A 235 CA CA A 502 1555 1555 2.49 LINK OE1 GLU A 236 CA CA A 502 1555 1555 2.50 LINK OE2 GLU A 236 CA CA A 502 1555 1555 2.54 LINK O ASP A 282 CA CA A 502 1555 1555 2.37 LINK CA CA A 502 O HOH A 726 1555 1555 2.41 CISPEP 1 ILE A 410 PRO A 411 0 -6.41 CRYST1 147.931 147.931 59.098 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006760 0.003903 0.000000 0.00000 SCALE2 0.000000 0.007806 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016921 0.00000 CONECT 1760 3962 CONECT 1764 3962 CONECT 1794 3962 CONECT 1795 3962 CONECT 1803 3962 CONECT 1804 3962 CONECT 2213 3962 CONECT 3897 3898 3904 3908 CONECT 3898 3897 3899 3905 CONECT 3899 3898 3900 3906 CONECT 3900 3899 3901 3907 CONECT 3901 3900 3902 3903 3908 CONECT 3902 3901 3909 CONECT 3903 3901 3910 CONECT 3904 3897 CONECT 3905 3898 CONECT 3906 3899 CONECT 3907 3900 3916 CONECT 3908 3897 3901 CONECT 3909 3902 CONECT 3910 3903 CONECT 3911 3912 3916 3917 CONECT 3912 3911 3913 3918 CONECT 3913 3912 3914 3919 CONECT 3914 3913 3915 3920 CONECT 3915 3914 3921 CONECT 3916 3907 3911 3920 CONECT 3917 3911 CONECT 3918 3912 CONECT 3919 3913 CONECT 3920 3914 3916 CONECT 3921 3915 CONECT 3922 3923 3927 3929 CONECT 3923 3922 3924 3930 CONECT 3924 3923 3925 3931 CONECT 3925 3924 3926 3932 CONECT 3926 3925 3933 CONECT 3927 3922 3928 3932 CONECT 3928 3927 CONECT 3929 3922 CONECT 3930 3923 CONECT 3931 3924 3939 CONECT 3932 3925 3927 CONECT 3933 3926 CONECT 3934 3935 3939 3940 CONECT 3935 3934 3936 3941 CONECT 3936 3935 3937 3942 CONECT 3937 3936 3938 3943 CONECT 3938 3937 3944 CONECT 3939 3931 3934 3943 CONECT 3940 3934 CONECT 3941 3935 CONECT 3942 3936 3950 CONECT 3943 3937 3939 CONECT 3944 3938 CONECT 3945 3946 3950 3951 CONECT 3946 3945 3947 3952 CONECT 3947 3946 3948 3953 CONECT 3948 3947 3949 3954 CONECT 3949 3948 3955 CONECT 3950 3942 3945 3954 CONECT 3951 3945 CONECT 3952 3946 CONECT 3953 3947 CONECT 3954 3948 3950 CONECT 3955 3949 CONECT 3956 3958 3960 CONECT 3957 3959 3960 CONECT 3958 3956 3961 CONECT 3959 3957 3961 CONECT 3960 3956 3957 CONECT 3961 3958 3959 CONECT 3962 1760 1764 1794 1795 CONECT 3962 1803 1804 2213 4269 CONECT 3963 3964 3965 CONECT 3964 3963 CONECT 3965 3963 3966 3967 CONECT 3966 3965 CONECT 3967 3965 3968 CONECT 3968 3967 CONECT 3969 3970 3971 CONECT 3970 3969 CONECT 3971 3969 3972 3973 CONECT 3972 3971 CONECT 3973 3971 3974 CONECT 3974 3973 CONECT 3975 3976 3977 CONECT 3976 3975 CONECT 3977 3975 3978 3979 CONECT 3978 3977 CONECT 3979 3977 3980 CONECT 3980 3979 CONECT 3981 3982 3983 CONECT 3982 3981 CONECT 3983 3981 3984 3985 CONECT 3984 3983 CONECT 3985 3983 3986 CONECT 3986 3985 CONECT 3987 3988 3989 CONECT 3988 3987 CONECT 3989 3987 3990 3991 CONECT 3990 3989 CONECT 3991 3989 3992 CONECT 3992 3991 CONECT 3993 3995 3997 CONECT 3994 3996 3998 CONECT 3995 3993 CONECT 3996 3994 CONECT 3997 3993 3999 4001 CONECT 3998 3994 4000 4002 CONECT 3999 3997 CONECT 4000 3998 CONECT 4001 3997 4003 CONECT 4002 3998 4004 CONECT 4003 4001 CONECT 4004 4002 CONECT 4005 4006 4007 CONECT 4006 4005 CONECT 4007 4005 4008 CONECT 4008 4007 CONECT 4009 4010 4011 CONECT 4010 4009 CONECT 4011 4009 4012 CONECT 4012 4011 CONECT 4013 4015 4017 CONECT 4014 4016 4018 CONECT 4015 4013 CONECT 4016 4014 CONECT 4017 4013 4019 CONECT 4018 4014 4020 CONECT 4019 4017 CONECT 4020 4018 CONECT 4021 4022 4023 CONECT 4022 4021 CONECT 4023 4021 4024 CONECT 4024 4023 CONECT 4025 4026 4027 CONECT 4026 4025 CONECT 4027 4025 4028 CONECT 4028 4027 CONECT 4029 4030 4031 CONECT 4030 4029 CONECT 4031 4029 4032 CONECT 4032 4031 CONECT 4033 4034 4035 CONECT 4034 4033 CONECT 4035 4033 4036 CONECT 4036 4035 CONECT 4037 4039 4041 CONECT 4038 4040 4042 CONECT 4039 4037 CONECT 4040 4038 CONECT 4041 4037 4043 CONECT 4042 4038 4044 CONECT 4043 4041 CONECT 4044 4042 CONECT 4045 4046 4047 CONECT 4046 4045 CONECT 4047 4045 4048 CONECT 4048 4047 CONECT 4049 4050 4051 CONECT 4050 4049 CONECT 4051 4049 4052 CONECT 4052 4051 CONECT 4053 4054 4055 CONECT 4054 4053 CONECT 4055 4053 4056 CONECT 4056 4055 CONECT 4057 4058 4059 CONECT 4058 4057 CONECT 4059 4057 4060 CONECT 4060 4059 CONECT 4061 4062 4063 CONECT 4062 4061 CONECT 4063 4061 4064 CONECT 4064 4063 CONECT 4065 4066 4067 CONECT 4066 4065 CONECT 4067 4065 4068 CONECT 4068 4067 CONECT 4069 4070 4071 CONECT 4070 4069 CONECT 4071 4069 4072 CONECT 4072 4071 CONECT 4073 4074 4075 CONECT 4074 4073 CONECT 4075 4073 4076 CONECT 4076 4075 CONECT 4077 4078 4079 CONECT 4078 4077 CONECT 4079 4077 4080 CONECT 4080 4079 CONECT 4081 4082 4083 CONECT 4082 4081 CONECT 4083 4081 4084 CONECT 4084 4083 CONECT 4085 4086 4087 CONECT 4086 4085 CONECT 4087 4085 4088 CONECT 4088 4087 CONECT 4089 4090 4091 CONECT 4090 4089 CONECT 4091 4089 4092 CONECT 4092 4091 CONECT 4093 4094 4095 CONECT 4094 4093 CONECT 4095 4093 4096 CONECT 4096 4095 CONECT 4097 4098 4099 CONECT 4098 4097 CONECT 4099 4097 4100 CONECT 4100 4099 CONECT 4101 4102 4103 CONECT 4102 4101 CONECT 4103 4101 4104 CONECT 4104 4103 CONECT 4105 4106 4107 CONECT 4106 4105 CONECT 4107 4105 4108 CONECT 4108 4107 CONECT 4109 4110 4111 CONECT 4110 4109 CONECT 4111 4109 4112 CONECT 4112 4111 CONECT 4113 4114 4115 CONECT 4114 4113 CONECT 4115 4113 4116 CONECT 4116 4115 CONECT 4117 4118 4119 4120 4121 CONECT 4118 4117 CONECT 4119 4117 CONECT 4120 4117 CONECT 4121 4117 CONECT 4122 4123 4124 4125 4126 CONECT 4123 4122 CONECT 4124 4122 CONECT 4125 4122 CONECT 4126 4122 CONECT 4127 4128 4129 4130 4131 CONECT 4128 4127 CONECT 4129 4127 CONECT 4130 4127 CONECT 4131 4127 CONECT 4269 3962 MASTER 381 0 42 17 3 0 0 6 4536 1 244 37 END