HEADER SIGNALING PROTEIN 15-FEB-12 4DQD TITLE THE CRYSTAL STRUCTURE OF A TRANSPORTER IN COMPLEX WITH 3-PHENYLPYRUVIC TITLE 2 ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXTRACELLULAR LIGAND-BINDING RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOPSEUDOMONAS PALUSTRIS; SOURCE 3 ORGANISM_TAXID: 316058; SOURCE 4 STRAIN: HAA2; SOURCE 5 GENE: RPB_4630 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GE NOMICS, MCSG, MIDWEST CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,J.C.MACK,S.ZERBS,F.COLLART,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 5 06-DEC-23 4DQD 1 REMARK REVDAT 4 13-SEP-23 4DQD 1 REMARK SEQADV LINK REVDAT 3 25-SEP-13 4DQD 1 JRNL REVDAT 2 15-MAY-13 4DQD 1 JRNL REVDAT 1 29-FEB-12 4DQD 0 JRNL AUTH K.TAN,C.CHANG,M.CUFF,J.OSIPIUK,E.LANDORF,J.C.MACK,S.ZERBS, JRNL AUTH 2 A.JOACHIMIAK,F.R.COLLART JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF SOLUTE BINDING JRNL TITL 2 PROTEINS FOR AROMATIC COMPOUNDS DERIVED FROM LIGNIN: JRNL TITL 3 P-COUMARIC ACID AND RELATED AROMATIC ACIDS. JRNL REF PROTEINS V. 81 1709 2013 JRNL REFN ISSN 0887-3585 JRNL PMID 23606130 JRNL DOI 10.1002/PROT.24305 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 56150 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.144 REMARK 3 R VALUE (WORKING SET) : 0.143 REMARK 3 FREE R VALUE : 0.162 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2848 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.9736 - 4.3390 0.99 2708 149 0.1553 0.1560 REMARK 3 2 4.3390 - 3.4465 1.00 2720 146 0.1314 0.1519 REMARK 3 3 3.4465 - 3.0116 1.00 2681 153 0.1426 0.1506 REMARK 3 4 3.0116 - 2.7366 1.00 2678 142 0.1448 0.1746 REMARK 3 5 2.7366 - 2.5406 1.00 2691 147 0.1475 0.1616 REMARK 3 6 2.5406 - 2.3909 1.00 2646 144 0.1376 0.1561 REMARK 3 7 2.3909 - 2.2713 1.00 2699 144 0.1355 0.1580 REMARK 3 8 2.2713 - 2.1724 1.00 2643 145 0.1291 0.1458 REMARK 3 9 2.1724 - 2.0889 1.00 2704 134 0.1294 0.1566 REMARK 3 10 2.0889 - 2.0168 1.00 2654 137 0.1309 0.1523 REMARK 3 11 2.0168 - 1.9538 1.00 2645 132 0.1279 0.1655 REMARK 3 12 1.9538 - 1.8979 1.00 2687 154 0.1326 0.1622 REMARK 3 13 1.8979 - 1.8480 1.00 2647 141 0.1386 0.1737 REMARK 3 14 1.8480 - 1.8029 1.00 2717 109 0.1418 0.1919 REMARK 3 15 1.8029 - 1.7619 1.00 2626 147 0.1477 0.1738 REMARK 3 16 1.7619 - 1.7244 1.00 2671 154 0.1536 0.2058 REMARK 3 17 1.7244 - 1.6900 1.00 2616 152 0.1622 0.1813 REMARK 3 18 1.6900 - 1.6581 1.00 2673 134 0.1752 0.1872 REMARK 3 19 1.6581 - 1.6285 1.00 2661 149 0.1843 0.2116 REMARK 3 20 1.6285 - 1.6009 0.96 2535 135 0.2107 0.2413 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 60.38 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.76190 REMARK 3 B22 (A**2) : 6.17910 REMARK 3 B33 (A**2) : -3.41720 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.13120 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2867 REMARK 3 ANGLE : 1.099 3877 REMARK 3 CHIRALITY : 0.075 431 REMARK 3 PLANARITY : 0.005 506 REMARK 3 DIHEDRAL : 14.289 1100 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 23:83) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8127 6.2649 33.6179 REMARK 3 T TENSOR REMARK 3 T11: 0.1593 T22: 0.1581 REMARK 3 T33: 0.1537 T12: 0.0001 REMARK 3 T13: 0.0052 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 1.9063 L22: 1.0803 REMARK 3 L33: 0.9331 L12: 0.5784 REMARK 3 L13: 0.0406 L23: 0.0686 REMARK 3 S TENSOR REMARK 3 S11: 0.0935 S12: -0.2802 S13: 0.1310 REMARK 3 S21: 0.1149 S22: -0.0625 S23: 0.0864 REMARK 3 S31: -0.1171 S32: -0.0602 S33: -0.0386 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 84:139) REMARK 3 ORIGIN FOR THE GROUP (A): 11.0924 -6.1995 31.2579 REMARK 3 T TENSOR REMARK 3 T11: 0.1594 T22: 0.1400 REMARK 3 T33: 0.1448 T12: 0.0088 REMARK 3 T13: -0.0165 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 1.2238 L22: 1.0681 REMARK 3 L33: 0.7104 L12: 0.4341 REMARK 3 L13: -0.3012 L23: -0.2970 REMARK 3 S TENSOR REMARK 3 S11: 0.0399 S12: -0.1846 S13: -0.0552 REMARK 3 S21: 0.1307 S22: -0.0419 S23: -0.0663 REMARK 3 S31: 0.0738 S32: 0.0746 S33: -0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 140:220) REMARK 3 ORIGIN FOR THE GROUP (A): 26.6460 -3.3335 9.3676 REMARK 3 T TENSOR REMARK 3 T11: 0.1615 T22: 0.1969 REMARK 3 T33: 0.1611 T12: 0.0052 REMARK 3 T13: 0.0181 T23: -0.0350 REMARK 3 L TENSOR REMARK 3 L11: 1.4832 L22: 0.9136 REMARK 3 L33: 1.1592 L12: 0.1147 REMARK 3 L13: -0.1155 L23: 0.0502 REMARK 3 S TENSOR REMARK 3 S11: -0.0723 S12: 0.1999 S13: -0.1636 REMARK 3 S21: -0.1057 S22: 0.0889 S23: -0.1017 REMARK 3 S31: 0.1020 S32: 0.1741 S33: -0.0206 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 221:279) REMARK 3 ORIGIN FOR THE GROUP (A): 16.8119 7.6715 7.4650 REMARK 3 T TENSOR REMARK 3 T11: 0.1879 T22: 0.1827 REMARK 3 T33: 0.1605 T12: -0.0305 REMARK 3 T13: -0.0108 T23: 0.0312 REMARK 3 L TENSOR REMARK 3 L11: 1.7867 L22: 0.5432 REMARK 3 L33: 0.8639 L12: 0.0002 REMARK 3 L13: 0.0826 L23: 0.0170 REMARK 3 S TENSOR REMARK 3 S11: -0.1056 S12: 0.3375 S13: 0.2848 REMARK 3 S21: -0.1121 S22: 0.1051 S23: -0.0090 REMARK 3 S31: -0.1547 S32: 0.0269 S33: -0.0048 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 280:365) REMARK 3 ORIGIN FOR THE GROUP (A): -0.8442 -2.9109 24.4469 REMARK 3 T TENSOR REMARK 3 T11: 0.1318 T22: 0.1443 REMARK 3 T33: 0.1652 T12: 0.0085 REMARK 3 T13: -0.0016 T23: -0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.9181 L22: 0.8339 REMARK 3 L33: 1.1990 L12: 0.4064 REMARK 3 L13: -0.0830 L23: -0.1408 REMARK 3 S TENSOR REMARK 3 S11: 0.0089 S12: -0.0234 S13: 0.0239 REMARK 3 S21: 0.0062 S22: 0.0396 S23: 0.1395 REMARK 3 S31: 0.0485 S32: -0.1811 S33: -0.0485 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 366:383) REMARK 3 ORIGIN FOR THE GROUP (A): 9.1905 0.7421 3.9578 REMARK 3 T TENSOR REMARK 3 T11: 0.1985 T22: 0.2422 REMARK 3 T33: 0.1349 T12: -0.0293 REMARK 3 T13: -0.0283 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 3.0580 L22: 3.8241 REMARK 3 L33: 2.5975 L12: 0.4289 REMARK 3 L13: -0.2526 L23: -0.5072 REMARK 3 S TENSOR REMARK 3 S11: -0.1763 S12: 0.6022 S13: 0.0096 REMARK 3 S21: -0.4290 S22: 0.1373 S23: 0.1156 REMARK 3 S31: 0.2472 S32: -0.0531 S33: 0.0282 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4DQD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000070651. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97931 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56211 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 26.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.57300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3SG0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M TRIMETHYLAMINE N-OXIDE, 0.1M REMARK 280 TRIS:HCL, 20% (W/V) PEG MME 2000, PH 8.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 62.51900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.21100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 62.51900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.21100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: EXPERIMENTALLY UNKNOWN. IT IS PREDICTED TO BE MONOMERIC. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 679 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 21 REMARK 465 ASN A 22 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 93 -156.53 -90.33 REMARK 500 GLN A 242 -161.69 -121.13 REMARK 500 ALA A 247 29.46 -75.63 REMARK 500 ASN A 362 -61.54 -102.69 REMARK 500 ASP A 365 -168.02 -126.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PPY A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3PY A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 406 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC102212 RELATED DB: TARGETTRACK DBREF 4DQD A 23 383 UNP Q2IR47 Q2IR47_RHOP2 23 383 SEQADV 4DQD SER A 21 UNP Q2IR47 EXPRESSION TAG SEQADV 4DQD ASN A 22 UNP Q2IR47 EXPRESSION TAG SEQRES 1 A 363 SER ASN ALA GLU ILE LYS ILE GLY ILE THR MSE SER ALA SEQRES 2 A 363 SER GLY PRO GLY ALA ALA LEU GLY GLN PRO GLN SER LYS SEQRES 3 A 363 THR VAL ALA ALA LEU PRO LYS GLU ILE GLY GLY GLU LYS SEQRES 4 A 363 VAL THR TYR PHE ALA LEU ASP ASP GLU SER ASP PRO THR SEQRES 5 A 363 LYS ALA ALA GLN ASN ALA ARG LYS LEU LEU SER GLU GLU SEQRES 6 A 363 LYS VAL ASP VAL LEU ILE GLY SER SER LEU THR PRO VAL SEQRES 7 A 363 SER LEU PRO LEU ILE ASP ILE ALA ALA GLU ALA LYS THR SEQRES 8 A 363 PRO LEU MSE THR MSE ALA ALA ALA ALA ILE LEU VAL ALA SEQRES 9 A 363 PRO MSE ASP GLU ARG ARG LYS TRP VAL TYR LYS VAL VAL SEQRES 10 A 363 PRO ASN ASP ASP ILE MSE ALA GLU ALA ILE GLY LYS TYR SEQRES 11 A 363 ILE ALA LYS THR GLY ALA LYS LYS VAL GLY TYR ILE GLY SEQRES 12 A 363 PHE SER ASP ALA TYR GLY GLU GLY TYR TYR LYS VAL LEU SEQRES 13 A 363 ALA ALA ALA ALA PRO LYS LEU GLY PHE GLU LEU THR THR SEQRES 14 A 363 HIS GLU VAL TYR ALA ARG SER ASP ALA SER VAL THR GLY SEQRES 15 A 363 GLN VAL LEU LYS ILE ILE ALA THR LYS PRO ASP ALA VAL SEQRES 16 A 363 PHE ILE ALA SER ALA GLY THR PRO ALA VAL LEU PRO GLN SEQRES 17 A 363 LYS ALA LEU ARG GLU ARG GLY PHE LYS GLY ALA ILE TYR SEQRES 18 A 363 GLN THR HIS GLY VAL ALA THR GLU GLU PHE ILE LYS LEU SEQRES 19 A 363 GLY GLY LYS ASP VAL GLU GLY ALA ILE PHE ALA GLY GLU SEQRES 20 A 363 ALA PHE SER GLY ALA GLU ASP MSE PRO ALA ASP SER PRO SEQRES 21 A 363 PHE ARG LYS VAL LYS ALA ARG PHE VAL ASP ALA TYR LYS SEQRES 22 A 363 ALA ALA ASN GLY GLY ALA ALA PRO THR ILE PHE GLY VAL SEQRES 23 A 363 HIS LEU TRP ASP SER MSE THR LEU VAL GLU ASN ALA ILE SEQRES 24 A 363 PRO ALA ALA LEU LYS ALA ALA LYS PRO GLY THR PRO GLU SEQRES 25 A 363 PHE ARG ALA ALA ILE ARG ASP GLN ILE GLU LYS SER LYS SEQRES 26 A 363 ASP LEU ALA LEU ASN ASN GLY LEU SER ASN MSE THR PRO SEQRES 27 A 363 ASP ASN HIS ASN GLY TYR ASP GLU ARG SER ALA PHE LEU SEQRES 28 A 363 ILE GLU ILE ARG ASP GLY ALA PHE ARG LEU LYS GLN MODRES 4DQD MSE A 31 MET SELENOMETHIONINE MODRES 4DQD MSE A 114 MET SELENOMETHIONINE MODRES 4DQD MSE A 116 MET SELENOMETHIONINE MODRES 4DQD MSE A 126 MET SELENOMETHIONINE MODRES 4DQD MSE A 143 MET SELENOMETHIONINE MODRES 4DQD MSE A 275 MET SELENOMETHIONINE MODRES 4DQD MSE A 312 MET SELENOMETHIONINE MODRES 4DQD MSE A 356 MET SELENOMETHIONINE HET MSE A 31 8 HET MSE A 114 8 HET MSE A 116 8 HET MSE A 126 8 HET MSE A 143 8 HET MSE A 275 8 HET MSE A 312 8 HET MSE A 356 8 HET PPY A 401 12 HET GOL A 402 6 HET GOL A 403 6 HET 3PY A 404 7 HET PG4 A 405 13 HET PG4 A 406 13 HETNAM MSE SELENOMETHIONINE HETNAM PPY 3-PHENYLPYRUVIC ACID HETNAM GOL GLYCEROL HETNAM 3PY 3-HYDROXYPYRUVIC ACID HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 2 PPY C9 H8 O3 FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 3PY C3 H4 O4 FORMUL 6 PG4 2(C8 H18 O5) FORMUL 8 HOH *340(H2 O) HELIX 1 1 GLY A 37 VAL A 48 1 12 HELIX 2 2 ALA A 49 LEU A 51 5 3 HELIX 3 3 ASP A 70 GLU A 84 1 15 HELIX 4 4 LEU A 95 LEU A 100 1 6 HELIX 5 5 PRO A 101 ALA A 109 1 9 HELIX 6 6 ALA A 119 VAL A 123 5 5 HELIX 7 7 ARG A 129 LYS A 131 5 3 HELIX 8 8 ASN A 139 THR A 154 1 16 HELIX 9 9 ASP A 166 GLY A 184 1 19 HELIX 10 10 VAL A 200 THR A 210 1 11 HELIX 11 11 GLY A 221 PRO A 223 5 3 HELIX 12 12 ALA A 224 ARG A 234 1 11 HELIX 13 13 THR A 243 ALA A 247 5 5 HELIX 14 14 THR A 248 GLY A 256 1 9 HELIX 15 15 LYS A 257 GLU A 260 5 4 HELIX 16 16 GLU A 267 ALA A 272 1 6 HELIX 17 17 GLU A 273 MSE A 275 5 3 HELIX 18 18 SER A 279 ASN A 296 1 18 HELIX 19 19 ILE A 303 ALA A 326 1 24 HELIX 20 20 THR A 330 GLU A 342 1 13 HELIX 21 21 ASP A 365 ALA A 369 5 5 SHEET 1 A 6 GLU A 54 ILE A 55 0 SHEET 2 A 6 GLU A 58 ASP A 66 -1 O GLU A 58 N ILE A 55 SHEET 3 A 6 ILE A 25 MSE A 31 1 N ILE A 29 O PHE A 63 SHEET 4 A 6 VAL A 89 ILE A 91 1 O VAL A 89 N GLY A 28 SHEET 5 A 6 LEU A 113 THR A 115 1 O MSE A 114 N LEU A 90 SHEET 6 A 6 VAL A 133 LYS A 135 1 O TYR A 134 N LEU A 113 SHEET 1 B 3 GLU A 186 LEU A 187 0 SHEET 2 B 3 LYS A 158 PHE A 164 1 N VAL A 159 O GLU A 186 SHEET 3 B 3 GLU A 191 TYR A 193 1 O GLU A 191 N TYR A 161 SHEET 1 C 4 GLU A 186 LEU A 187 0 SHEET 2 C 4 LYS A 158 PHE A 164 1 N VAL A 159 O GLU A 186 SHEET 3 C 4 ALA A 214 ALA A 218 1 O PHE A 216 N GLY A 160 SHEET 4 C 4 ALA A 239 TYR A 241 1 O TYR A 241 N VAL A 215 SHEET 1 D 3 ILE A 263 GLY A 266 0 SHEET 2 D 3 PHE A 370 ARG A 375 -1 O PHE A 370 N GLY A 266 SHEET 3 D 3 ALA A 378 LEU A 381 -1 O ALA A 378 N ARG A 375 SHEET 1 E 2 LEU A 347 LEU A 349 0 SHEET 2 E 2 GLY A 352 SER A 354 -1 O SER A 354 N LEU A 347 LINK C THR A 30 N MSE A 31 1555 1555 1.33 LINK C MSE A 31 N SER A 32 1555 1555 1.33 LINK C LEU A 113 N MSE A 114 1555 1555 1.33 LINK C MSE A 114 N THR A 115 1555 1555 1.33 LINK C THR A 115 N MSE A 116 1555 1555 1.33 LINK C MSE A 116 N ALA A 117 1555 1555 1.33 LINK C PRO A 125 N MSE A 126 1555 1555 1.33 LINK C MSE A 126 N ASP A 127 1555 1555 1.33 LINK C ILE A 142 N MSE A 143 1555 1555 1.33 LINK C MSE A 143 N ALA A 144 1555 1555 1.33 LINK C ASP A 274 N MSE A 275 1555 1555 1.33 LINK C MSE A 275 N PRO A 276 1555 1555 1.34 LINK C SER A 311 N MSE A 312 1555 1555 1.33 LINK C MSE A 312 N THR A 313 1555 1555 1.33 LINK C ASN A 355 N MSE A 356 1555 1555 1.33 LINK C MSE A 356 N THR A 357 1555 1555 1.33 CISPEP 1 GLY A 92 SER A 93 0 -11.95 CISPEP 2 ALA A 124 PRO A 125 0 -5.26 SITE 1 AC1 15 LEU A 40 SER A 94 LEU A 95 THR A 96 SITE 2 AC1 15 PRO A 97 MSE A 116 ALA A 117 ALA A 118 SITE 3 AC1 15 VAL A 137 TYR A 168 ARG A 195 ALA A 220 SITE 4 AC1 15 HIS A 244 GLY A 245 HIS A 307 SITE 1 AC2 4 ALA A 38 GLN A 42 ARG A 129 GLU A 250 SITE 1 AC3 5 GLU A 191 GLY A 202 GLN A 203 LYS A 206 SITE 2 AC3 5 HOH A 652 SITE 1 AC4 7 PRO A 52 ARG A 287 TRP A 309 MSE A 312 SITE 2 AC4 7 THR A 313 GLU A 316 HOH A 735 SITE 1 AC5 6 GLU A 249 GLU A 250 ALA A 300 PRO A 301 SITE 2 AC5 6 THR A 302 HOH A 723 SITE 1 AC6 4 SER A 165 ASP A 166 ALA A 167 GLU A 170 CRYST1 125.038 62.422 60.623 90.00 113.67 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007998 0.000000 0.003507 0.00000 SCALE2 0.000000 0.016020 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018011 0.00000