data_4DSI # _entry.id 4DSI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.393 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4DSI pdb_00004dsi 10.2210/pdb4dsi/pdb NDB NA1628 ? ? RCSB RCSB070726 ? ? WWPDB D_1000070726 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-03-27 2 'Structure model' 1 1 2023-09-13 3 'Structure model' 2 0 2024-05-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' 5 3 'Structure model' Advisory 6 3 'Structure model' 'Atomic model' 7 3 'Structure model' 'Data collection' 8 3 'Structure model' 'Derived calculations' 9 3 'Structure model' 'Non-polymer description' 10 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' struct_ref_seq_dif 6 2 'Structure model' struct_site 7 3 'Structure model' atom_site 8 3 'Structure model' chem_comp 9 3 'Structure model' chem_comp_atom 10 3 'Structure model' chem_comp_bond 11 3 'Structure model' pdbx_entity_nonpoly 12 3 'Structure model' pdbx_nonpoly_scheme 13 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 14 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_ref_seq_dif.details' 4 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 2 'Structure model' '_struct_site.pdbx_auth_seq_id' 7 3 'Structure model' '_atom_site.auth_comp_id' 8 3 'Structure model' '_atom_site.label_comp_id' 9 3 'Structure model' '_chem_comp.formula' 10 3 'Structure model' '_chem_comp.formula_weight' 11 3 'Structure model' '_chem_comp.id' 12 3 'Structure model' '_chem_comp.mon_nstd_flag' 13 3 'Structure model' '_chem_comp.name' 14 3 'Structure model' '_chem_comp.pdbx_synonyms' 15 3 'Structure model' '_chem_comp.type' 16 3 'Structure model' '_pdbx_entity_nonpoly.comp_id' 17 3 'Structure model' '_pdbx_nonpoly_scheme.mon_id' 18 3 'Structure model' '_pdbx_nonpoly_scheme.pdb_mon_id' 19 3 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.auth_atom_id' 20 3 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.auth_comp_id' 21 3 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.label_atom_id' 22 3 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.label_comp_id' 23 3 'Structure model' '_struct_site.details' 24 3 'Structure model' '_struct_site.pdbx_auth_comp_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4DSI _pdbx_database_status.recvd_initial_deposition_date 2012-02-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3ht3 'Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus V713P mutant bound to G:dCTP' unspecified PDB 4dsj 'DNA polymerase I from Bacillus stearothermophilus wuth duplex DNA, dGTP and Calcium' unspecified PDB 4dsk 'DNA polymerase I from Bacillus stearothermophilus wuth duplex DNA, PPi and Calcium' unspecified PDB 4dsl 'Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with duplex DNA and Calcium' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gan, J.H.' 1 'Abdur, R.' 2 'Liu, H.H.' 3 'Sheng, J.' 4 'Caton-Willians, J.' 5 'Soares, A.S.' 6 'Huang, Z.' 7 # _citation.id primary _citation.title 'Biochemical and structural insights into the fidelity of bacillus stearothermophilus DNA polymerase' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gan, J.H.' 1 ? primary 'Abdur, R.' 2 ? primary 'Liu, H.H.' 3 ? primary 'Sheng, J.' 4 ? primary 'Caton-Willians, J.' 5 ? primary 'Soares, A.S.' 6 ? primary 'Huang, Z.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase' 66245.898 1 2.7.7.7 A598D 'RESIDUES 298-876' ? 2 polymer syn DNA 3687.417 1 ? ? ? ? 3 polymer syn Se-dGTP 2691.774 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 5 ? ? ? ? 5 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 6 non-polymer syn "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" 347.221 1 ? ? ? ? 7 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 8 water nat water 18.015 242 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSKMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKR AAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIW ELERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLG VILFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGR LSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSED EVTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPD ITSRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQA VTLRVPLKVDYHYGSTWYDAK ; ;GSKMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKR AAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIW ELERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLG VILFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGR LSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSED EVTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPD ITSRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQA VTLRVPLKVDYHYGSTWYDAK ; A ? 2 polydeoxyribonucleotide no no '(DA)(DT)(DC)(DC)(DG)(DA)(DG)(DT)(DC)(DA)(DG)(DG)' ATCCGAGTCAGG B ? 3 polydeoxyribonucleotide no no '(DC)(DC)(DT)(DG)(DA)(DC)(DT)(DC)(DG)' CCTGACTCG C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 GLYCEROL GOL 5 'SULFATE ION' SO4 6 "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" DGP 7 'CALCIUM ION' CA 8 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 LYS n 1 4 MET n 1 5 ALA n 1 6 PHE n 1 7 THR n 1 8 LEU n 1 9 ALA n 1 10 ASP n 1 11 ARG n 1 12 VAL n 1 13 THR n 1 14 GLU n 1 15 GLU n 1 16 MET n 1 17 LEU n 1 18 ALA n 1 19 ASP n 1 20 LYS n 1 21 ALA n 1 22 ALA n 1 23 LEU n 1 24 VAL n 1 25 VAL n 1 26 GLU n 1 27 VAL n 1 28 VAL n 1 29 GLU n 1 30 GLU n 1 31 ASN n 1 32 TYR n 1 33 HIS n 1 34 ASP n 1 35 ALA n 1 36 PRO n 1 37 ILE n 1 38 VAL n 1 39 GLY n 1 40 ILE n 1 41 ALA n 1 42 VAL n 1 43 VAL n 1 44 ASN n 1 45 GLU n 1 46 HIS n 1 47 GLY n 1 48 ARG n 1 49 PHE n 1 50 PHE n 1 51 LEU n 1 52 ARG n 1 53 PRO n 1 54 GLU n 1 55 THR n 1 56 ALA n 1 57 LEU n 1 58 ALA n 1 59 ASP n 1 60 PRO n 1 61 GLN n 1 62 PHE n 1 63 VAL n 1 64 ALA n 1 65 TRP n 1 66 LEU n 1 67 GLY n 1 68 ASP n 1 69 GLU n 1 70 THR n 1 71 LYS n 1 72 LYS n 1 73 LYS n 1 74 SER n 1 75 MET n 1 76 PHE n 1 77 ASP n 1 78 SER n 1 79 LYS n 1 80 ARG n 1 81 ALA n 1 82 ALA n 1 83 VAL n 1 84 ALA n 1 85 LEU n 1 86 LYS n 1 87 TRP n 1 88 LYS n 1 89 GLY n 1 90 ILE n 1 91 GLU n 1 92 LEU n 1 93 CYS n 1 94 GLY n 1 95 VAL n 1 96 SER n 1 97 PHE n 1 98 ASP n 1 99 LEU n 1 100 LEU n 1 101 LEU n 1 102 ALA n 1 103 ALA n 1 104 TYR n 1 105 LEU n 1 106 LEU n 1 107 ASP n 1 108 PRO n 1 109 ALA n 1 110 GLN n 1 111 GLY n 1 112 VAL n 1 113 ASP n 1 114 ASP n 1 115 VAL n 1 116 ALA n 1 117 ALA n 1 118 ALA n 1 119 ALA n 1 120 LYS n 1 121 MET n 1 122 LYS n 1 123 GLN n 1 124 TYR n 1 125 GLU n 1 126 ALA n 1 127 VAL n 1 128 ARG n 1 129 PRO n 1 130 ASP n 1 131 GLU n 1 132 ALA n 1 133 VAL n 1 134 TYR n 1 135 GLY n 1 136 LYS n 1 137 GLY n 1 138 ALA n 1 139 LYS n 1 140 ARG n 1 141 ALA n 1 142 VAL n 1 143 PRO n 1 144 ASP n 1 145 GLU n 1 146 PRO n 1 147 VAL n 1 148 LEU n 1 149 ALA n 1 150 GLU n 1 151 HIS n 1 152 LEU n 1 153 VAL n 1 154 ARG n 1 155 LYS n 1 156 ALA n 1 157 ALA n 1 158 ALA n 1 159 ILE n 1 160 TRP n 1 161 GLU n 1 162 LEU n 1 163 GLU n 1 164 ARG n 1 165 PRO n 1 166 PHE n 1 167 LEU n 1 168 ASP n 1 169 GLU n 1 170 LEU n 1 171 ARG n 1 172 ARG n 1 173 ASN n 1 174 GLU n 1 175 GLN n 1 176 ASP n 1 177 ARG n 1 178 LEU n 1 179 LEU n 1 180 VAL n 1 181 GLU n 1 182 LEU n 1 183 GLU n 1 184 GLN n 1 185 PRO n 1 186 LEU n 1 187 SER n 1 188 SER n 1 189 ILE n 1 190 LEU n 1 191 ALA n 1 192 GLU n 1 193 MET n 1 194 GLU n 1 195 PHE n 1 196 ALA n 1 197 GLY n 1 198 VAL n 1 199 LYS n 1 200 VAL n 1 201 ASP n 1 202 THR n 1 203 LYS n 1 204 ARG n 1 205 LEU n 1 206 GLU n 1 207 GLN n 1 208 MET n 1 209 GLY n 1 210 LYS n 1 211 GLU n 1 212 LEU n 1 213 ALA n 1 214 GLU n 1 215 GLN n 1 216 LEU n 1 217 GLY n 1 218 THR n 1 219 VAL n 1 220 GLU n 1 221 GLN n 1 222 ARG n 1 223 ILE n 1 224 TYR n 1 225 GLU n 1 226 LEU n 1 227 ALA n 1 228 GLY n 1 229 GLN n 1 230 GLU n 1 231 PHE n 1 232 ASN n 1 233 ILE n 1 234 ASN n 1 235 SER n 1 236 PRO n 1 237 LYS n 1 238 GLN n 1 239 LEU n 1 240 GLY n 1 241 VAL n 1 242 ILE n 1 243 LEU n 1 244 PHE n 1 245 GLU n 1 246 LYS n 1 247 LEU n 1 248 GLN n 1 249 LEU n 1 250 PRO n 1 251 VAL n 1 252 LEU n 1 253 LYS n 1 254 LYS n 1 255 THR n 1 256 LYS n 1 257 THR n 1 258 GLY n 1 259 TYR n 1 260 SER n 1 261 THR n 1 262 SER n 1 263 ALA n 1 264 ASP n 1 265 VAL n 1 266 LEU n 1 267 GLU n 1 268 LYS n 1 269 LEU n 1 270 ALA n 1 271 PRO n 1 272 TYR n 1 273 HIS n 1 274 GLU n 1 275 ILE n 1 276 VAL n 1 277 GLU n 1 278 ASN n 1 279 ILE n 1 280 LEU n 1 281 HIS n 1 282 TYR n 1 283 ARG n 1 284 GLN n 1 285 LEU n 1 286 GLY n 1 287 LYS n 1 288 LEU n 1 289 GLN n 1 290 SER n 1 291 THR n 1 292 TYR n 1 293 ILE n 1 294 GLU n 1 295 GLY n 1 296 LEU n 1 297 LEU n 1 298 LYS n 1 299 VAL n 1 300 VAL n 1 301 ARG n 1 302 PRO n 1 303 ASP n 1 304 THR n 1 305 LYS n 1 306 LYS n 1 307 VAL n 1 308 HIS n 1 309 THR n 1 310 ILE n 1 311 PHE n 1 312 ASN n 1 313 GLN n 1 314 ALA n 1 315 LEU n 1 316 THR n 1 317 GLN n 1 318 THR n 1 319 GLY n 1 320 ARG n 1 321 LEU n 1 322 SER n 1 323 SER n 1 324 THR n 1 325 GLU n 1 326 PRO n 1 327 ASN n 1 328 LEU n 1 329 GLN n 1 330 ASN n 1 331 ILE n 1 332 PRO n 1 333 ILE n 1 334 ARG n 1 335 LEU n 1 336 GLU n 1 337 GLU n 1 338 GLY n 1 339 ARG n 1 340 LYS n 1 341 ILE n 1 342 ARG n 1 343 GLN n 1 344 ALA n 1 345 PHE n 1 346 VAL n 1 347 PRO n 1 348 SER n 1 349 GLU n 1 350 SER n 1 351 ASP n 1 352 TRP n 1 353 LEU n 1 354 ILE n 1 355 PHE n 1 356 ALA n 1 357 ALA n 1 358 ASP n 1 359 TYR n 1 360 SER n 1 361 GLN n 1 362 ILE n 1 363 GLU n 1 364 LEU n 1 365 ARG n 1 366 VAL n 1 367 LEU n 1 368 ALA n 1 369 HIS n 1 370 ILE n 1 371 ALA n 1 372 GLU n 1 373 ASP n 1 374 ASP n 1 375 ASN n 1 376 LEU n 1 377 MET n 1 378 GLU n 1 379 ALA n 1 380 PHE n 1 381 ARG n 1 382 ARG n 1 383 ASP n 1 384 LEU n 1 385 ASP n 1 386 ILE n 1 387 HIS n 1 388 THR n 1 389 LYS n 1 390 THR n 1 391 ALA n 1 392 MET n 1 393 ASP n 1 394 ILE n 1 395 PHE n 1 396 GLN n 1 397 VAL n 1 398 SER n 1 399 GLU n 1 400 ASP n 1 401 GLU n 1 402 VAL n 1 403 THR n 1 404 PRO n 1 405 ASN n 1 406 MET n 1 407 ARG n 1 408 ARG n 1 409 GLN n 1 410 ALA n 1 411 LYS n 1 412 ALA n 1 413 VAL n 1 414 ASN n 1 415 PHE n 1 416 GLY n 1 417 ILE n 1 418 VAL n 1 419 TYR n 1 420 GLY n 1 421 ILE n 1 422 SER n 1 423 ASP n 1 424 TYR n 1 425 GLY n 1 426 LEU n 1 427 ALA n 1 428 GLN n 1 429 ASN n 1 430 LEU n 1 431 ASN n 1 432 ILE n 1 433 SER n 1 434 ARG n 1 435 LYS n 1 436 GLU n 1 437 ALA n 1 438 ALA n 1 439 GLU n 1 440 PHE n 1 441 ILE n 1 442 GLU n 1 443 ARG n 1 444 TYR n 1 445 PHE n 1 446 GLU n 1 447 SER n 1 448 PHE n 1 449 PRO n 1 450 GLY n 1 451 VAL n 1 452 LYS n 1 453 ARG n 1 454 TYR n 1 455 MET n 1 456 GLU n 1 457 ASN n 1 458 ILE n 1 459 VAL n 1 460 GLN n 1 461 GLU n 1 462 ALA n 1 463 LYS n 1 464 GLN n 1 465 LYS n 1 466 GLY n 1 467 TYR n 1 468 VAL n 1 469 THR n 1 470 THR n 1 471 LEU n 1 472 LEU n 1 473 HIS n 1 474 ARG n 1 475 ARG n 1 476 ARG n 1 477 TYR n 1 478 LEU n 1 479 PRO n 1 480 ASP n 1 481 ILE n 1 482 THR n 1 483 SER n 1 484 ARG n 1 485 ASN n 1 486 PHE n 1 487 ASN n 1 488 VAL n 1 489 ARG n 1 490 SER n 1 491 PHE n 1 492 ALA n 1 493 GLU n 1 494 ARG n 1 495 MET n 1 496 ALA n 1 497 MET n 1 498 ASN n 1 499 THR n 1 500 PRO n 1 501 ILE n 1 502 GLN n 1 503 GLY n 1 504 SER n 1 505 ALA n 1 506 ALA n 1 507 ASP n 1 508 ILE n 1 509 ILE n 1 510 LYS n 1 511 LYS n 1 512 ALA n 1 513 MET n 1 514 ILE n 1 515 ASP n 1 516 LEU n 1 517 ASN n 1 518 ALA n 1 519 ARG n 1 520 LEU n 1 521 LYS n 1 522 GLU n 1 523 GLU n 1 524 ARG n 1 525 LEU n 1 526 GLN n 1 527 ALA n 1 528 HIS n 1 529 LEU n 1 530 LEU n 1 531 LEU n 1 532 GLN n 1 533 VAL n 1 534 HIS n 1 535 ASP n 1 536 GLU n 1 537 LEU n 1 538 ILE n 1 539 LEU n 1 540 GLU n 1 541 ALA n 1 542 PRO n 1 543 LYS n 1 544 GLU n 1 545 GLU n 1 546 MET n 1 547 GLU n 1 548 ARG n 1 549 LEU n 1 550 CYS n 1 551 ARG n 1 552 LEU n 1 553 VAL n 1 554 PRO n 1 555 GLU n 1 556 VAL n 1 557 MET n 1 558 GLU n 1 559 GLN n 1 560 ALA n 1 561 VAL n 1 562 THR n 1 563 LEU n 1 564 ARG n 1 565 VAL n 1 566 PRO n 1 567 LEU n 1 568 LYS n 1 569 VAL n 1 570 ASP n 1 571 TYR n 1 572 HIS n 1 573 TYR n 1 574 GLY n 1 575 SER n 1 576 THR n 1 577 TRP n 1 578 TYR n 1 579 ASP n 1 580 ALA n 1 581 LYS n 2 1 DA n 2 2 DT n 2 3 DC n 2 4 DC n 2 5 DG n 2 6 DA n 2 7 DG n 2 8 DT n 2 9 DC n 2 10 DA n 2 11 DG n 2 12 DG n 3 1 DC n 3 2 DC n 3 3 DT n 3 4 DG n 3 5 DA n 3 6 DC n 3 7 DT n 3 8 DC n 3 9 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene DPO1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Geobacillus stearothermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1422 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? ? ? ? 'Synthesized DNA' 3 1 sample ? ? ? ? ? 'Se-modified dGTP' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DGP non-polymer n "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 296 296 GLY GLY A . n A 1 2 SER 2 297 297 SER SER A . n A 1 3 LYS 3 298 298 LYS LYS A . n A 1 4 MET 4 299 299 MET MET A . n A 1 5 ALA 5 300 300 ALA ALA A . n A 1 6 PHE 6 301 301 PHE PHE A . n A 1 7 THR 7 302 302 THR THR A . n A 1 8 LEU 8 303 303 LEU LEU A . n A 1 9 ALA 9 304 304 ALA ALA A . n A 1 10 ASP 10 305 305 ASP ASP A . n A 1 11 ARG 11 306 306 ARG ARG A . n A 1 12 VAL 12 307 307 VAL VAL A . n A 1 13 THR 13 308 308 THR THR A . n A 1 14 GLU 14 309 309 GLU GLU A . n A 1 15 GLU 15 310 310 GLU GLU A . n A 1 16 MET 16 311 311 MET MET A . n A 1 17 LEU 17 312 312 LEU LEU A . n A 1 18 ALA 18 313 313 ALA ALA A . n A 1 19 ASP 19 314 314 ASP ASP A . n A 1 20 LYS 20 315 315 LYS LYS A . n A 1 21 ALA 21 316 316 ALA ALA A . n A 1 22 ALA 22 317 317 ALA ALA A . n A 1 23 LEU 23 318 318 LEU LEU A . n A 1 24 VAL 24 319 319 VAL VAL A . n A 1 25 VAL 25 320 320 VAL VAL A . n A 1 26 GLU 26 321 321 GLU GLU A . n A 1 27 VAL 27 322 322 VAL VAL A . n A 1 28 VAL 28 323 323 VAL VAL A . n A 1 29 GLU 29 324 324 GLU GLU A . n A 1 30 GLU 30 325 325 GLU GLU A . n A 1 31 ASN 31 326 326 ASN ASN A . n A 1 32 TYR 32 327 327 TYR TYR A . n A 1 33 HIS 33 328 328 HIS HIS A . n A 1 34 ASP 34 329 329 ASP ASP A . n A 1 35 ALA 35 330 330 ALA ALA A . n A 1 36 PRO 36 331 331 PRO PRO A . n A 1 37 ILE 37 332 332 ILE ILE A . n A 1 38 VAL 38 333 333 VAL VAL A . n A 1 39 GLY 39 334 334 GLY GLY A . n A 1 40 ILE 40 335 335 ILE ILE A . n A 1 41 ALA 41 336 336 ALA ALA A . n A 1 42 VAL 42 337 337 VAL VAL A . n A 1 43 VAL 43 338 338 VAL VAL A . n A 1 44 ASN 44 339 339 ASN ASN A . n A 1 45 GLU 45 340 340 GLU GLU A . n A 1 46 HIS 46 341 341 HIS HIS A . n A 1 47 GLY 47 342 342 GLY GLY A . n A 1 48 ARG 48 343 343 ARG ARG A . n A 1 49 PHE 49 344 344 PHE PHE A . n A 1 50 PHE 50 345 345 PHE PHE A . n A 1 51 LEU 51 346 346 LEU LEU A . n A 1 52 ARG 52 347 347 ARG ARG A . n A 1 53 PRO 53 348 348 PRO PRO A . n A 1 54 GLU 54 349 349 GLU GLU A . n A 1 55 THR 55 350 350 THR THR A . n A 1 56 ALA 56 351 351 ALA ALA A . n A 1 57 LEU 57 352 352 LEU LEU A . n A 1 58 ALA 58 353 353 ALA ALA A . n A 1 59 ASP 59 354 354 ASP ASP A . n A 1 60 PRO 60 355 355 PRO PRO A . n A 1 61 GLN 61 356 356 GLN GLN A . n A 1 62 PHE 62 357 357 PHE PHE A . n A 1 63 VAL 63 358 358 VAL VAL A . n A 1 64 ALA 64 359 359 ALA ALA A . n A 1 65 TRP 65 360 360 TRP TRP A . n A 1 66 LEU 66 361 361 LEU LEU A . n A 1 67 GLY 67 362 362 GLY GLY A . n A 1 68 ASP 68 363 363 ASP ASP A . n A 1 69 GLU 69 364 364 GLU GLU A . n A 1 70 THR 70 365 365 THR THR A . n A 1 71 LYS 71 366 366 LYS LYS A . n A 1 72 LYS 72 367 367 LYS LYS A . n A 1 73 LYS 73 368 368 LYS LYS A . n A 1 74 SER 74 369 369 SER SER A . n A 1 75 MET 75 370 370 MET MET A . n A 1 76 PHE 76 371 371 PHE PHE A . n A 1 77 ASP 77 372 372 ASP ASP A . n A 1 78 SER 78 373 373 SER SER A . n A 1 79 LYS 79 374 374 LYS LYS A . n A 1 80 ARG 80 375 375 ARG ARG A . n A 1 81 ALA 81 376 376 ALA ALA A . n A 1 82 ALA 82 377 377 ALA ALA A . n A 1 83 VAL 83 378 378 VAL VAL A . n A 1 84 ALA 84 379 379 ALA ALA A . n A 1 85 LEU 85 380 380 LEU LEU A . n A 1 86 LYS 86 381 381 LYS LYS A . n A 1 87 TRP 87 382 382 TRP TRP A . n A 1 88 LYS 88 383 383 LYS LYS A . n A 1 89 GLY 89 384 384 GLY GLY A . n A 1 90 ILE 90 385 385 ILE ILE A . n A 1 91 GLU 91 386 386 GLU GLU A . n A 1 92 LEU 92 387 387 LEU LEU A . n A 1 93 CYS 93 388 388 CYS CYS A . n A 1 94 GLY 94 389 389 GLY GLY A . n A 1 95 VAL 95 390 390 VAL VAL A . n A 1 96 SER 96 391 391 SER SER A . n A 1 97 PHE 97 392 392 PHE PHE A . n A 1 98 ASP 98 393 393 ASP ASP A . n A 1 99 LEU 99 394 394 LEU LEU A . n A 1 100 LEU 100 395 395 LEU LEU A . n A 1 101 LEU 101 396 396 LEU LEU A . n A 1 102 ALA 102 397 397 ALA ALA A . n A 1 103 ALA 103 398 398 ALA ALA A . n A 1 104 TYR 104 399 399 TYR TYR A . n A 1 105 LEU 105 400 400 LEU LEU A . n A 1 106 LEU 106 401 401 LEU LEU A . n A 1 107 ASP 107 402 402 ASP ASP A . n A 1 108 PRO 108 403 403 PRO PRO A . n A 1 109 ALA 109 404 404 ALA ALA A . n A 1 110 GLN 110 405 405 GLN GLN A . n A 1 111 GLY 111 406 406 GLY GLY A . n A 1 112 VAL 112 407 407 VAL VAL A . n A 1 113 ASP 113 408 408 ASP ASP A . n A 1 114 ASP 114 409 409 ASP ASP A . n A 1 115 VAL 115 410 410 VAL VAL A . n A 1 116 ALA 116 411 411 ALA ALA A . n A 1 117 ALA 117 412 412 ALA ALA A . n A 1 118 ALA 118 413 413 ALA ALA A . n A 1 119 ALA 119 414 414 ALA ALA A . n A 1 120 LYS 120 415 415 LYS LYS A . n A 1 121 MET 121 416 416 MET MET A . n A 1 122 LYS 122 417 417 LYS LYS A . n A 1 123 GLN 123 418 418 GLN GLN A . n A 1 124 TYR 124 419 419 TYR TYR A . n A 1 125 GLU 125 420 420 GLU GLU A . n A 1 126 ALA 126 421 421 ALA ALA A . n A 1 127 VAL 127 422 422 VAL VAL A . n A 1 128 ARG 128 423 423 ARG ARG A . n A 1 129 PRO 129 424 424 PRO PRO A . n A 1 130 ASP 130 425 425 ASP ASP A . n A 1 131 GLU 131 426 426 GLU GLU A . n A 1 132 ALA 132 427 427 ALA ALA A . n A 1 133 VAL 133 428 428 VAL VAL A . n A 1 134 TYR 134 429 429 TYR TYR A . n A 1 135 GLY 135 430 430 GLY GLY A . n A 1 136 LYS 136 431 431 LYS LYS A . n A 1 137 GLY 137 432 432 GLY GLY A . n A 1 138 ALA 138 433 433 ALA ALA A . n A 1 139 LYS 139 434 434 LYS LYS A . n A 1 140 ARG 140 435 435 ARG ARG A . n A 1 141 ALA 141 436 436 ALA ALA A . n A 1 142 VAL 142 437 437 VAL VAL A . n A 1 143 PRO 143 438 438 PRO PRO A . n A 1 144 ASP 144 439 439 ASP ASP A . n A 1 145 GLU 145 440 440 GLU GLU A . n A 1 146 PRO 146 441 441 PRO PRO A . n A 1 147 VAL 147 442 442 VAL VAL A . n A 1 148 LEU 148 443 443 LEU LEU A . n A 1 149 ALA 149 444 444 ALA ALA A . n A 1 150 GLU 150 445 445 GLU GLU A . n A 1 151 HIS 151 446 446 HIS HIS A . n A 1 152 LEU 152 447 447 LEU LEU A . n A 1 153 VAL 153 448 448 VAL VAL A . n A 1 154 ARG 154 449 449 ARG ARG A . n A 1 155 LYS 155 450 450 LYS LYS A . n A 1 156 ALA 156 451 451 ALA ALA A . n A 1 157 ALA 157 452 452 ALA ALA A . n A 1 158 ALA 158 453 453 ALA ALA A . n A 1 159 ILE 159 454 454 ILE ILE A . n A 1 160 TRP 160 455 455 TRP TRP A . n A 1 161 GLU 161 456 456 GLU GLU A . n A 1 162 LEU 162 457 457 LEU LEU A . n A 1 163 GLU 163 458 458 GLU GLU A . n A 1 164 ARG 164 459 459 ARG ARG A . n A 1 165 PRO 165 460 460 PRO PRO A . n A 1 166 PHE 166 461 461 PHE PHE A . n A 1 167 LEU 167 462 462 LEU LEU A . n A 1 168 ASP 168 463 463 ASP ASP A . n A 1 169 GLU 169 464 464 GLU GLU A . n A 1 170 LEU 170 465 465 LEU LEU A . n A 1 171 ARG 171 466 466 ARG ARG A . n A 1 172 ARG 172 467 467 ARG ARG A . n A 1 173 ASN 173 468 468 ASN ASN A . n A 1 174 GLU 174 469 469 GLU GLU A . n A 1 175 GLN 175 470 470 GLN GLN A . n A 1 176 ASP 176 471 471 ASP ASP A . n A 1 177 ARG 177 472 472 ARG ARG A . n A 1 178 LEU 178 473 473 LEU LEU A . n A 1 179 LEU 179 474 474 LEU LEU A . n A 1 180 VAL 180 475 475 VAL VAL A . n A 1 181 GLU 181 476 476 GLU GLU A . n A 1 182 LEU 182 477 477 LEU LEU A . n A 1 183 GLU 183 478 478 GLU GLU A . n A 1 184 GLN 184 479 479 GLN GLN A . n A 1 185 PRO 185 480 480 PRO PRO A . n A 1 186 LEU 186 481 481 LEU LEU A . n A 1 187 SER 187 482 482 SER SER A . n A 1 188 SER 188 483 483 SER SER A . n A 1 189 ILE 189 484 484 ILE ILE A . n A 1 190 LEU 190 485 485 LEU LEU A . n A 1 191 ALA 191 486 486 ALA ALA A . n A 1 192 GLU 192 487 487 GLU GLU A . n A 1 193 MET 193 488 488 MET MET A . n A 1 194 GLU 194 489 489 GLU GLU A . n A 1 195 PHE 195 490 490 PHE PHE A . n A 1 196 ALA 196 491 491 ALA ALA A . n A 1 197 GLY 197 492 492 GLY GLY A . n A 1 198 VAL 198 493 493 VAL VAL A . n A 1 199 LYS 199 494 494 LYS LYS A . n A 1 200 VAL 200 495 495 VAL VAL A . n A 1 201 ASP 201 496 496 ASP ASP A . n A 1 202 THR 202 497 497 THR THR A . n A 1 203 LYS 203 498 498 LYS LYS A . n A 1 204 ARG 204 499 499 ARG ARG A . n A 1 205 LEU 205 500 500 LEU LEU A . n A 1 206 GLU 206 501 501 GLU GLU A . n A 1 207 GLN 207 502 502 GLN GLN A . n A 1 208 MET 208 503 503 MET MET A . n A 1 209 GLY 209 504 504 GLY GLY A . n A 1 210 LYS 210 505 505 LYS LYS A . n A 1 211 GLU 211 506 506 GLU GLU A . n A 1 212 LEU 212 507 507 LEU LEU A . n A 1 213 ALA 213 508 508 ALA ALA A . n A 1 214 GLU 214 509 509 GLU GLU A . n A 1 215 GLN 215 510 510 GLN GLN A . n A 1 216 LEU 216 511 511 LEU LEU A . n A 1 217 GLY 217 512 512 GLY GLY A . n A 1 218 THR 218 513 513 THR THR A . n A 1 219 VAL 219 514 514 VAL VAL A . n A 1 220 GLU 220 515 515 GLU GLU A . n A 1 221 GLN 221 516 516 GLN GLN A . n A 1 222 ARG 222 517 517 ARG ARG A . n A 1 223 ILE 223 518 518 ILE ILE A . n A 1 224 TYR 224 519 519 TYR TYR A . n A 1 225 GLU 225 520 520 GLU GLU A . n A 1 226 LEU 226 521 521 LEU LEU A . n A 1 227 ALA 227 522 522 ALA ALA A . n A 1 228 GLY 228 523 523 GLY GLY A . n A 1 229 GLN 229 524 524 GLN GLN A . n A 1 230 GLU 230 525 525 GLU GLU A . n A 1 231 PHE 231 526 526 PHE PHE A . n A 1 232 ASN 232 527 527 ASN ASN A . n A 1 233 ILE 233 528 528 ILE ILE A . n A 1 234 ASN 234 529 529 ASN ASN A . n A 1 235 SER 235 530 530 SER SER A . n A 1 236 PRO 236 531 531 PRO PRO A . n A 1 237 LYS 237 532 532 LYS LYS A . n A 1 238 GLN 238 533 533 GLN GLN A . n A 1 239 LEU 239 534 534 LEU LEU A . n A 1 240 GLY 240 535 535 GLY GLY A . n A 1 241 VAL 241 536 536 VAL VAL A . n A 1 242 ILE 242 537 537 ILE ILE A . n A 1 243 LEU 243 538 538 LEU LEU A . n A 1 244 PHE 244 539 539 PHE PHE A . n A 1 245 GLU 245 540 540 GLU GLU A . n A 1 246 LYS 246 541 541 LYS LYS A . n A 1 247 LEU 247 542 542 LEU LEU A . n A 1 248 GLN 248 543 543 GLN GLN A . n A 1 249 LEU 249 544 544 LEU LEU A . n A 1 250 PRO 250 545 545 PRO PRO A . n A 1 251 VAL 251 546 546 VAL VAL A . n A 1 252 LEU 252 547 547 LEU LEU A . n A 1 253 LYS 253 548 548 LYS LYS A . n A 1 254 LYS 254 549 549 LYS LYS A . n A 1 255 THR 255 550 550 THR THR A . n A 1 256 LYS 256 551 551 LYS LYS A . n A 1 257 THR 257 552 552 THR THR A . n A 1 258 GLY 258 553 553 GLY GLY A . n A 1 259 TYR 259 554 554 TYR TYR A . n A 1 260 SER 260 555 555 SER SER A . n A 1 261 THR 261 556 556 THR THR A . n A 1 262 SER 262 557 557 SER SER A . n A 1 263 ALA 263 558 558 ALA ALA A . n A 1 264 ASP 264 559 559 ASP ASP A . n A 1 265 VAL 265 560 560 VAL VAL A . n A 1 266 LEU 266 561 561 LEU LEU A . n A 1 267 GLU 267 562 562 GLU GLU A . n A 1 268 LYS 268 563 563 LYS LYS A . n A 1 269 LEU 269 564 564 LEU LEU A . n A 1 270 ALA 270 565 565 ALA ALA A . n A 1 271 PRO 271 566 566 PRO PRO A . n A 1 272 TYR 272 567 567 TYR TYR A . n A 1 273 HIS 273 568 568 HIS HIS A . n A 1 274 GLU 274 569 569 GLU GLU A . n A 1 275 ILE 275 570 570 ILE ILE A . n A 1 276 VAL 276 571 571 VAL VAL A . n A 1 277 GLU 277 572 572 GLU GLU A . n A 1 278 ASN 278 573 573 ASN ASN A . n A 1 279 ILE 279 574 574 ILE ILE A . n A 1 280 LEU 280 575 575 LEU LEU A . n A 1 281 HIS 281 576 576 HIS HIS A . n A 1 282 TYR 282 577 577 TYR TYR A . n A 1 283 ARG 283 578 578 ARG ARG A . n A 1 284 GLN 284 579 579 GLN GLN A . n A 1 285 LEU 285 580 580 LEU LEU A . n A 1 286 GLY 286 581 581 GLY GLY A . n A 1 287 LYS 287 582 582 LYS LYS A . n A 1 288 LEU 288 583 583 LEU LEU A . n A 1 289 GLN 289 584 584 GLN GLN A . n A 1 290 SER 290 585 585 SER SER A . n A 1 291 THR 291 586 586 THR THR A . n A 1 292 TYR 292 587 587 TYR TYR A . n A 1 293 ILE 293 588 588 ILE ILE A . n A 1 294 GLU 294 589 589 GLU GLU A . n A 1 295 GLY 295 590 590 GLY GLY A . n A 1 296 LEU 296 591 591 LEU LEU A . n A 1 297 LEU 297 592 592 LEU LEU A . n A 1 298 LYS 298 593 593 LYS LYS A . n A 1 299 VAL 299 594 594 VAL VAL A . n A 1 300 VAL 300 595 595 VAL VAL A . n A 1 301 ARG 301 596 596 ARG ARG A . n A 1 302 PRO 302 597 597 PRO PRO A . n A 1 303 ASP 303 598 598 ASP ASP A . n A 1 304 THR 304 599 599 THR THR A . n A 1 305 LYS 305 600 600 LYS LYS A . n A 1 306 LYS 306 601 601 LYS LYS A . n A 1 307 VAL 307 602 602 VAL VAL A . n A 1 308 HIS 308 603 603 HIS HIS A . n A 1 309 THR 309 604 604 THR THR A . n A 1 310 ILE 310 605 605 ILE ILE A . n A 1 311 PHE 311 606 606 PHE PHE A . n A 1 312 ASN 312 607 607 ASN ASN A . n A 1 313 GLN 313 608 608 GLN GLN A . n A 1 314 ALA 314 609 609 ALA ALA A . n A 1 315 LEU 315 610 610 LEU LEU A . n A 1 316 THR 316 611 611 THR THR A . n A 1 317 GLN 317 612 612 GLN GLN A . n A 1 318 THR 318 613 613 THR THR A . n A 1 319 GLY 319 614 614 GLY GLY A . n A 1 320 ARG 320 615 615 ARG ARG A . n A 1 321 LEU 321 616 616 LEU LEU A . n A 1 322 SER 322 617 617 SER SER A . n A 1 323 SER 323 618 618 SER SER A . n A 1 324 THR 324 619 619 THR THR A . n A 1 325 GLU 325 620 620 GLU GLU A . n A 1 326 PRO 326 621 621 PRO PRO A . n A 1 327 ASN 327 622 622 ASN ASN A . n A 1 328 LEU 328 623 623 LEU LEU A . n A 1 329 GLN 329 624 624 GLN GLN A . n A 1 330 ASN 330 625 625 ASN ASN A . n A 1 331 ILE 331 626 626 ILE ILE A . n A 1 332 PRO 332 627 627 PRO PRO A . n A 1 333 ILE 333 628 628 ILE ILE A . n A 1 334 ARG 334 629 629 ARG ARG A . n A 1 335 LEU 335 630 630 LEU LEU A . n A 1 336 GLU 336 631 631 GLU GLU A . n A 1 337 GLU 337 632 632 GLU GLU A . n A 1 338 GLY 338 633 633 GLY GLY A . n A 1 339 ARG 339 634 634 ARG ARG A . n A 1 340 LYS 340 635 635 LYS LYS A . n A 1 341 ILE 341 636 636 ILE ILE A . n A 1 342 ARG 342 637 637 ARG ARG A . n A 1 343 GLN 343 638 638 GLN GLN A . n A 1 344 ALA 344 639 639 ALA ALA A . n A 1 345 PHE 345 640 640 PHE PHE A . n A 1 346 VAL 346 641 641 VAL VAL A . n A 1 347 PRO 347 642 642 PRO PRO A . n A 1 348 SER 348 643 643 SER SER A . n A 1 349 GLU 349 644 644 GLU GLU A . n A 1 350 SER 350 645 645 SER SER A . n A 1 351 ASP 351 646 646 ASP ASP A . n A 1 352 TRP 352 647 647 TRP TRP A . n A 1 353 LEU 353 648 648 LEU LEU A . n A 1 354 ILE 354 649 649 ILE ILE A . n A 1 355 PHE 355 650 650 PHE PHE A . n A 1 356 ALA 356 651 651 ALA ALA A . n A 1 357 ALA 357 652 652 ALA ALA A . n A 1 358 ASP 358 653 653 ASP ASP A . n A 1 359 TYR 359 654 654 TYR TYR A . n A 1 360 SER 360 655 655 SER SER A . n A 1 361 GLN 361 656 656 GLN GLN A . n A 1 362 ILE 362 657 657 ILE ILE A . n A 1 363 GLU 363 658 658 GLU GLU A . n A 1 364 LEU 364 659 659 LEU LEU A . n A 1 365 ARG 365 660 660 ARG ARG A . n A 1 366 VAL 366 661 661 VAL VAL A . n A 1 367 LEU 367 662 662 LEU LEU A . n A 1 368 ALA 368 663 663 ALA ALA A . n A 1 369 HIS 369 664 664 HIS HIS A . n A 1 370 ILE 370 665 665 ILE ILE A . n A 1 371 ALA 371 666 666 ALA ALA A . n A 1 372 GLU 372 667 667 GLU GLU A . n A 1 373 ASP 373 668 668 ASP ASP A . n A 1 374 ASP 374 669 669 ASP ASP A . n A 1 375 ASN 375 670 670 ASN ASN A . n A 1 376 LEU 376 671 671 LEU LEU A . n A 1 377 MET 377 672 672 MET MET A . n A 1 378 GLU 378 673 673 GLU GLU A . n A 1 379 ALA 379 674 674 ALA ALA A . n A 1 380 PHE 380 675 675 PHE PHE A . n A 1 381 ARG 381 676 676 ARG ARG A . n A 1 382 ARG 382 677 677 ARG ARG A . n A 1 383 ASP 383 678 678 ASP ASP A . n A 1 384 LEU 384 679 679 LEU LEU A . n A 1 385 ASP 385 680 680 ASP ASP A . n A 1 386 ILE 386 681 681 ILE ILE A . n A 1 387 HIS 387 682 682 HIS HIS A . n A 1 388 THR 388 683 683 THR THR A . n A 1 389 LYS 389 684 684 LYS LYS A . n A 1 390 THR 390 685 685 THR THR A . n A 1 391 ALA 391 686 686 ALA ALA A . n A 1 392 MET 392 687 687 MET MET A . n A 1 393 ASP 393 688 688 ASP ASP A . n A 1 394 ILE 394 689 689 ILE ILE A . n A 1 395 PHE 395 690 690 PHE PHE A . n A 1 396 GLN 396 691 691 GLN GLN A . n A 1 397 VAL 397 692 692 VAL VAL A . n A 1 398 SER 398 693 693 SER SER A . n A 1 399 GLU 399 694 694 GLU GLU A . n A 1 400 ASP 400 695 695 ASP ASP A . n A 1 401 GLU 401 696 696 GLU GLU A . n A 1 402 VAL 402 697 697 VAL VAL A . n A 1 403 THR 403 698 698 THR THR A . n A 1 404 PRO 404 699 699 PRO PRO A . n A 1 405 ASN 405 700 700 ASN ASN A . n A 1 406 MET 406 701 701 MET MET A . n A 1 407 ARG 407 702 702 ARG ARG A . n A 1 408 ARG 408 703 703 ARG ARG A . n A 1 409 GLN 409 704 704 GLN GLN A . n A 1 410 ALA 410 705 705 ALA ALA A . n A 1 411 LYS 411 706 706 LYS LYS A . n A 1 412 ALA 412 707 707 ALA ALA A . n A 1 413 VAL 413 708 708 VAL VAL A . n A 1 414 ASN 414 709 709 ASN ASN A . n A 1 415 PHE 415 710 710 PHE PHE A . n A 1 416 GLY 416 711 711 GLY GLY A . n A 1 417 ILE 417 712 712 ILE ILE A . n A 1 418 VAL 418 713 713 VAL VAL A . n A 1 419 TYR 419 714 714 TYR TYR A . n A 1 420 GLY 420 715 715 GLY GLY A . n A 1 421 ILE 421 716 716 ILE ILE A . n A 1 422 SER 422 717 717 SER SER A . n A 1 423 ASP 423 718 718 ASP ASP A . n A 1 424 TYR 424 719 719 TYR TYR A . n A 1 425 GLY 425 720 720 GLY GLY A . n A 1 426 LEU 426 721 721 LEU LEU A . n A 1 427 ALA 427 722 722 ALA ALA A . n A 1 428 GLN 428 723 723 GLN GLN A . n A 1 429 ASN 429 724 724 ASN ASN A . n A 1 430 LEU 430 725 725 LEU LEU A . n A 1 431 ASN 431 726 726 ASN ASN A . n A 1 432 ILE 432 727 727 ILE ILE A . n A 1 433 SER 433 728 728 SER SER A . n A 1 434 ARG 434 729 729 ARG ARG A . n A 1 435 LYS 435 730 730 LYS LYS A . n A 1 436 GLU 436 731 731 GLU GLU A . n A 1 437 ALA 437 732 732 ALA ALA A . n A 1 438 ALA 438 733 733 ALA ALA A . n A 1 439 GLU 439 734 734 GLU GLU A . n A 1 440 PHE 440 735 735 PHE PHE A . n A 1 441 ILE 441 736 736 ILE ILE A . n A 1 442 GLU 442 737 737 GLU GLU A . n A 1 443 ARG 443 738 738 ARG ARG A . n A 1 444 TYR 444 739 739 TYR TYR A . n A 1 445 PHE 445 740 740 PHE PHE A . n A 1 446 GLU 446 741 741 GLU GLU A . n A 1 447 SER 447 742 742 SER SER A . n A 1 448 PHE 448 743 743 PHE PHE A . n A 1 449 PRO 449 744 744 PRO PRO A . n A 1 450 GLY 450 745 745 GLY GLY A . n A 1 451 VAL 451 746 746 VAL VAL A . n A 1 452 LYS 452 747 747 LYS LYS A . n A 1 453 ARG 453 748 748 ARG ARG A . n A 1 454 TYR 454 749 749 TYR TYR A . n A 1 455 MET 455 750 750 MET MET A . n A 1 456 GLU 456 751 751 GLU GLU A . n A 1 457 ASN 457 752 752 ASN ASN A . n A 1 458 ILE 458 753 753 ILE ILE A . n A 1 459 VAL 459 754 754 VAL VAL A . n A 1 460 GLN 460 755 755 GLN GLN A . n A 1 461 GLU 461 756 756 GLU GLU A . n A 1 462 ALA 462 757 757 ALA ALA A . n A 1 463 LYS 463 758 758 LYS LYS A . n A 1 464 GLN 464 759 759 GLN GLN A . n A 1 465 LYS 465 760 760 LYS LYS A . n A 1 466 GLY 466 761 761 GLY GLY A . n A 1 467 TYR 467 762 762 TYR TYR A . n A 1 468 VAL 468 763 763 VAL VAL A . n A 1 469 THR 469 764 764 THR THR A . n A 1 470 THR 470 765 765 THR THR A . n A 1 471 LEU 471 766 766 LEU LEU A . n A 1 472 LEU 472 767 767 LEU LEU A . n A 1 473 HIS 473 768 768 HIS HIS A . n A 1 474 ARG 474 769 769 ARG ARG A . n A 1 475 ARG 475 770 770 ARG ARG A . n A 1 476 ARG 476 771 771 ARG ARG A . n A 1 477 TYR 477 772 772 TYR TYR A . n A 1 478 LEU 478 773 773 LEU LEU A . n A 1 479 PRO 479 774 774 PRO PRO A . n A 1 480 ASP 480 775 775 ASP ASP A . n A 1 481 ILE 481 776 776 ILE ILE A . n A 1 482 THR 482 777 777 THR THR A . n A 1 483 SER 483 778 778 SER SER A . n A 1 484 ARG 484 779 779 ARG ARG A . n A 1 485 ASN 485 780 780 ASN ASN A . n A 1 486 PHE 486 781 781 PHE PHE A . n A 1 487 ASN 487 782 782 ASN ASN A . n A 1 488 VAL 488 783 783 VAL VAL A . n A 1 489 ARG 489 784 784 ARG ARG A . n A 1 490 SER 490 785 785 SER SER A . n A 1 491 PHE 491 786 786 PHE PHE A . n A 1 492 ALA 492 787 787 ALA ALA A . n A 1 493 GLU 493 788 788 GLU GLU A . n A 1 494 ARG 494 789 789 ARG ARG A . n A 1 495 MET 495 790 790 MET MET A . n A 1 496 ALA 496 791 791 ALA ALA A . n A 1 497 MET 497 792 792 MET MET A . n A 1 498 ASN 498 793 793 ASN ASN A . n A 1 499 THR 499 794 794 THR THR A . n A 1 500 PRO 500 795 795 PRO PRO A . n A 1 501 ILE 501 796 796 ILE ILE A . n A 1 502 GLN 502 797 797 GLN GLN A . n A 1 503 GLY 503 798 798 GLY GLY A . n A 1 504 SER 504 799 799 SER SER A . n A 1 505 ALA 505 800 800 ALA ALA A . n A 1 506 ALA 506 801 801 ALA ALA A . n A 1 507 ASP 507 802 802 ASP ASP A . n A 1 508 ILE 508 803 803 ILE ILE A . n A 1 509 ILE 509 804 804 ILE ILE A . n A 1 510 LYS 510 805 805 LYS LYS A . n A 1 511 LYS 511 806 806 LYS LYS A . n A 1 512 ALA 512 807 807 ALA ALA A . n A 1 513 MET 513 808 808 MET MET A . n A 1 514 ILE 514 809 809 ILE ILE A . n A 1 515 ASP 515 810 810 ASP ASP A . n A 1 516 LEU 516 811 811 LEU LEU A . n A 1 517 ASN 517 812 812 ASN ASN A . n A 1 518 ALA 518 813 813 ALA ALA A . n A 1 519 ARG 519 814 814 ARG ARG A . n A 1 520 LEU 520 815 815 LEU LEU A . n A 1 521 LYS 521 816 816 LYS LYS A . n A 1 522 GLU 522 817 817 GLU GLU A . n A 1 523 GLU 523 818 818 GLU GLU A . n A 1 524 ARG 524 819 819 ARG ARG A . n A 1 525 LEU 525 820 820 LEU LEU A . n A 1 526 GLN 526 821 821 GLN GLN A . n A 1 527 ALA 527 822 822 ALA ALA A . n A 1 528 HIS 528 823 823 HIS HIS A . n A 1 529 LEU 529 824 824 LEU LEU A . n A 1 530 LEU 530 825 825 LEU LEU A . n A 1 531 LEU 531 826 826 LEU LEU A . n A 1 532 GLN 532 827 827 GLN GLN A . n A 1 533 VAL 533 828 828 VAL VAL A . n A 1 534 HIS 534 829 829 HIS HIS A . n A 1 535 ASP 535 830 830 ASP ASP A . n A 1 536 GLU 536 831 831 GLU GLU A . n A 1 537 LEU 537 832 832 LEU LEU A . n A 1 538 ILE 538 833 833 ILE ILE A . n A 1 539 LEU 539 834 834 LEU LEU A . n A 1 540 GLU 540 835 835 GLU GLU A . n A 1 541 ALA 541 836 836 ALA ALA A . n A 1 542 PRO 542 837 837 PRO PRO A . n A 1 543 LYS 543 838 838 LYS LYS A . n A 1 544 GLU 544 839 839 GLU GLU A . n A 1 545 GLU 545 840 840 GLU GLU A . n A 1 546 MET 546 841 841 MET MET A . n A 1 547 GLU 547 842 842 GLU GLU A . n A 1 548 ARG 548 843 843 ARG ARG A . n A 1 549 LEU 549 844 844 LEU LEU A . n A 1 550 CYS 550 845 845 CYS CYS A . n A 1 551 ARG 551 846 846 ARG ARG A . n A 1 552 LEU 552 847 847 LEU LEU A . n A 1 553 VAL 553 848 848 VAL VAL A . n A 1 554 PRO 554 849 849 PRO PRO A . n A 1 555 GLU 555 850 850 GLU GLU A . n A 1 556 VAL 556 851 851 VAL VAL A . n A 1 557 MET 557 852 852 MET MET A . n A 1 558 GLU 558 853 853 GLU GLU A . n A 1 559 GLN 559 854 854 GLN GLN A . n A 1 560 ALA 560 855 855 ALA ALA A . n A 1 561 VAL 561 856 856 VAL VAL A . n A 1 562 THR 562 857 857 THR THR A . n A 1 563 LEU 563 858 858 LEU LEU A . n A 1 564 ARG 564 859 859 ARG ARG A . n A 1 565 VAL 565 860 860 VAL VAL A . n A 1 566 PRO 566 861 861 PRO PRO A . n A 1 567 LEU 567 862 862 LEU LEU A . n A 1 568 LYS 568 863 863 LYS LYS A . n A 1 569 VAL 569 864 864 VAL VAL A . n A 1 570 ASP 570 865 865 ASP ASP A . n A 1 571 TYR 571 866 866 TYR TYR A . n A 1 572 HIS 572 867 867 HIS HIS A . n A 1 573 TYR 573 868 868 TYR TYR A . n A 1 574 GLY 574 869 869 GLY GLY A . n A 1 575 SER 575 870 870 SER SER A . n A 1 576 THR 576 871 871 THR THR A . n A 1 577 TRP 577 872 872 TRP TRP A . n A 1 578 TYR 578 873 873 TYR TYR A . n A 1 579 ASP 579 874 874 ASP ASP A . n A 1 580 ALA 580 875 875 ALA ALA A . n A 1 581 LYS 581 876 876 LYS LYS A . n B 2 1 DA 1 1 ? ? ? B . n B 2 2 DT 2 2 ? ? ? B . n B 2 3 DC 3 3 ? ? ? B . n B 2 4 DC 4 4 4 DC DC B . n B 2 5 DG 5 5 5 DG DG B . n B 2 6 DA 6 6 6 DA DA B . n B 2 7 DG 7 7 7 DG DG B . n B 2 8 DT 8 8 8 DT DT B . n B 2 9 DC 9 9 9 DC DC B . n B 2 10 DA 10 10 10 DA DA B . n B 2 11 DG 11 11 11 DG DG B . n B 2 12 DG 12 12 12 DG DG B . n C 3 1 DC 1 1 1 DC DC C . n C 3 2 DC 2 2 2 DC DC C . n C 3 3 DT 3 3 3 DT DT C . n C 3 4 DG 4 4 4 DG DG C . n C 3 5 DA 5 5 5 DA DA C . n C 3 6 DC 6 6 6 DC DC C . n C 3 7 DT 7 7 7 DT DT C . n C 3 8 DC 8 8 8 DC DC C . n C 3 9 DG 9 9 9 DG DG C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 GOL 1 901 401 GOL GOL A . E 4 GOL 1 902 402 GOL GOL A . F 4 GOL 1 903 403 GOL GOL A . G 4 GOL 1 904 404 GOL GOL A . H 4 GOL 1 905 405 GOL GOL A . I 5 SO4 1 906 1 SO4 SO4 A . J 5 SO4 1 907 2 SO4 SO4 A . K 5 SO4 1 908 3 SO4 SO4 A . L 6 DGP 1 101 1 DGP DG C . M 7 CA 1 102 3 CA CA C . N 8 HOH 1 1001 7 HOH HOH A . N 8 HOH 2 1002 8 HOH HOH A . N 8 HOH 3 1003 9 HOH HOH A . N 8 HOH 4 1004 10 HOH HOH A . N 8 HOH 5 1005 11 HOH HOH A . N 8 HOH 6 1006 12 HOH HOH A . N 8 HOH 7 1007 13 HOH HOH A . N 8 HOH 8 1008 14 HOH HOH A . N 8 HOH 9 1009 15 HOH HOH A . N 8 HOH 10 1010 16 HOH HOH A . N 8 HOH 11 1011 17 HOH HOH A . N 8 HOH 12 1012 18 HOH HOH A . N 8 HOH 13 1013 19 HOH HOH A . N 8 HOH 14 1014 20 HOH HOH A . N 8 HOH 15 1015 21 HOH HOH A . N 8 HOH 16 1016 22 HOH HOH A . N 8 HOH 17 1017 23 HOH HOH A . N 8 HOH 18 1018 24 HOH HOH A . N 8 HOH 19 1019 25 HOH HOH A . N 8 HOH 20 1020 26 HOH HOH A . N 8 HOH 21 1021 27 HOH HOH A . N 8 HOH 22 1022 28 HOH HOH A . N 8 HOH 23 1023 29 HOH HOH A . N 8 HOH 24 1024 31 HOH HOH A . N 8 HOH 25 1025 32 HOH HOH A . N 8 HOH 26 1026 33 HOH HOH A . N 8 HOH 27 1027 34 HOH HOH A . N 8 HOH 28 1028 35 HOH HOH A . N 8 HOH 29 1029 36 HOH HOH A . N 8 HOH 30 1030 37 HOH HOH A . N 8 HOH 31 1031 38 HOH HOH A . N 8 HOH 32 1032 39 HOH HOH A . N 8 HOH 33 1033 40 HOH HOH A . N 8 HOH 34 1034 41 HOH HOH A . N 8 HOH 35 1035 42 HOH HOH A . N 8 HOH 36 1036 43 HOH HOH A . N 8 HOH 37 1037 44 HOH HOH A . N 8 HOH 38 1038 45 HOH HOH A . N 8 HOH 39 1039 46 HOH HOH A . N 8 HOH 40 1040 48 HOH HOH A . N 8 HOH 41 1041 49 HOH HOH A . N 8 HOH 42 1042 50 HOH HOH A . N 8 HOH 43 1043 51 HOH HOH A . N 8 HOH 44 1044 52 HOH HOH A . N 8 HOH 45 1045 53 HOH HOH A . N 8 HOH 46 1046 54 HOH HOH A . N 8 HOH 47 1047 56 HOH HOH A . N 8 HOH 48 1048 57 HOH HOH A . N 8 HOH 49 1049 58 HOH HOH A . N 8 HOH 50 1050 59 HOH HOH A . N 8 HOH 51 1051 60 HOH HOH A . N 8 HOH 52 1052 61 HOH HOH A . N 8 HOH 53 1053 62 HOH HOH A . N 8 HOH 54 1054 63 HOH HOH A . N 8 HOH 55 1055 64 HOH HOH A . N 8 HOH 56 1056 65 HOH HOH A . N 8 HOH 57 1057 67 HOH HOH A . N 8 HOH 58 1058 69 HOH HOH A . N 8 HOH 59 1059 70 HOH HOH A . N 8 HOH 60 1060 71 HOH HOH A . N 8 HOH 61 1061 72 HOH HOH A . N 8 HOH 62 1062 74 HOH HOH A . N 8 HOH 63 1063 75 HOH HOH A . N 8 HOH 64 1064 76 HOH HOH A . N 8 HOH 65 1065 77 HOH HOH A . N 8 HOH 66 1066 78 HOH HOH A . N 8 HOH 67 1067 79 HOH HOH A . N 8 HOH 68 1068 80 HOH HOH A . N 8 HOH 69 1069 81 HOH HOH A . N 8 HOH 70 1070 82 HOH HOH A . N 8 HOH 71 1071 83 HOH HOH A . N 8 HOH 72 1072 84 HOH HOH A . N 8 HOH 73 1073 85 HOH HOH A . N 8 HOH 74 1074 86 HOH HOH A . N 8 HOH 75 1075 87 HOH HOH A . N 8 HOH 76 1076 88 HOH HOH A . N 8 HOH 77 1077 89 HOH HOH A . N 8 HOH 78 1078 90 HOH HOH A . N 8 HOH 79 1079 91 HOH HOH A . N 8 HOH 80 1080 92 HOH HOH A . N 8 HOH 81 1081 93 HOH HOH A . N 8 HOH 82 1082 94 HOH HOH A . N 8 HOH 83 1083 95 HOH HOH A . N 8 HOH 84 1084 96 HOH HOH A . N 8 HOH 85 1085 97 HOH HOH A . N 8 HOH 86 1086 98 HOH HOH A . N 8 HOH 87 1087 99 HOH HOH A . N 8 HOH 88 1088 100 HOH HOH A . N 8 HOH 89 1089 103 HOH HOH A . N 8 HOH 90 1090 104 HOH HOH A . N 8 HOH 91 1091 105 HOH HOH A . N 8 HOH 92 1092 107 HOH HOH A . N 8 HOH 93 1093 112 HOH HOH A . N 8 HOH 94 1094 115 HOH HOH A . N 8 HOH 95 1095 116 HOH HOH A . N 8 HOH 96 1096 117 HOH HOH A . N 8 HOH 97 1097 118 HOH HOH A . N 8 HOH 98 1098 119 HOH HOH A . N 8 HOH 99 1099 120 HOH HOH A . N 8 HOH 100 1100 121 HOH HOH A . N 8 HOH 101 1101 122 HOH HOH A . N 8 HOH 102 1102 123 HOH HOH A . N 8 HOH 103 1103 124 HOH HOH A . N 8 HOH 104 1104 127 HOH HOH A . N 8 HOH 105 1105 129 HOH HOH A . N 8 HOH 106 1106 130 HOH HOH A . N 8 HOH 107 1107 131 HOH HOH A . N 8 HOH 108 1108 132 HOH HOH A . N 8 HOH 109 1109 133 HOH HOH A . N 8 HOH 110 1110 134 HOH HOH A . N 8 HOH 111 1111 135 HOH HOH A . N 8 HOH 112 1112 136 HOH HOH A . N 8 HOH 113 1113 137 HOH HOH A . N 8 HOH 114 1114 138 HOH HOH A . N 8 HOH 115 1115 139 HOH HOH A . N 8 HOH 116 1116 140 HOH HOH A . N 8 HOH 117 1117 141 HOH HOH A . N 8 HOH 118 1118 142 HOH HOH A . N 8 HOH 119 1119 143 HOH HOH A . N 8 HOH 120 1120 144 HOH HOH A . N 8 HOH 121 1121 146 HOH HOH A . N 8 HOH 122 1122 147 HOH HOH A . N 8 HOH 123 1123 148 HOH HOH A . N 8 HOH 124 1124 149 HOH HOH A . N 8 HOH 125 1125 150 HOH HOH A . N 8 HOH 126 1126 151 HOH HOH A . N 8 HOH 127 1127 153 HOH HOH A . N 8 HOH 128 1128 154 HOH HOH A . N 8 HOH 129 1129 155 HOH HOH A . N 8 HOH 130 1130 156 HOH HOH A . N 8 HOH 131 1131 157 HOH HOH A . N 8 HOH 132 1132 158 HOH HOH A . N 8 HOH 133 1133 159 HOH HOH A . N 8 HOH 134 1134 160 HOH HOH A . N 8 HOH 135 1135 161 HOH HOH A . N 8 HOH 136 1136 162 HOH HOH A . N 8 HOH 137 1137 163 HOH HOH A . N 8 HOH 138 1138 164 HOH HOH A . N 8 HOH 139 1139 165 HOH HOH A . N 8 HOH 140 1140 166 HOH HOH A . N 8 HOH 141 1141 167 HOH HOH A . N 8 HOH 142 1142 169 HOH HOH A . N 8 HOH 143 1143 170 HOH HOH A . N 8 HOH 144 1144 171 HOH HOH A . N 8 HOH 145 1145 172 HOH HOH A . N 8 HOH 146 1146 173 HOH HOH A . N 8 HOH 147 1147 174 HOH HOH A . N 8 HOH 148 1148 175 HOH HOH A . N 8 HOH 149 1149 176 HOH HOH A . N 8 HOH 150 1150 177 HOH HOH A . N 8 HOH 151 1151 178 HOH HOH A . N 8 HOH 152 1152 179 HOH HOH A . N 8 HOH 153 1153 180 HOH HOH A . N 8 HOH 154 1154 181 HOH HOH A . N 8 HOH 155 1155 182 HOH HOH A . N 8 HOH 156 1156 183 HOH HOH A . N 8 HOH 157 1157 184 HOH HOH A . N 8 HOH 158 1158 186 HOH HOH A . N 8 HOH 159 1159 188 HOH HOH A . N 8 HOH 160 1160 189 HOH HOH A . N 8 HOH 161 1161 190 HOH HOH A . N 8 HOH 162 1162 191 HOH HOH A . N 8 HOH 163 1163 193 HOH HOH A . N 8 HOH 164 1164 194 HOH HOH A . N 8 HOH 165 1165 196 HOH HOH A . N 8 HOH 166 1166 197 HOH HOH A . N 8 HOH 167 1167 199 HOH HOH A . N 8 HOH 168 1168 200 HOH HOH A . N 8 HOH 169 1169 201 HOH HOH A . N 8 HOH 170 1170 203 HOH HOH A . N 8 HOH 171 1171 204 HOH HOH A . N 8 HOH 172 1172 205 HOH HOH A . N 8 HOH 173 1173 206 HOH HOH A . N 8 HOH 174 1174 210 HOH HOH A . N 8 HOH 175 1175 214 HOH HOH A . N 8 HOH 176 1176 215 HOH HOH A . N 8 HOH 177 1177 216 HOH HOH A . N 8 HOH 178 1178 217 HOH HOH A . N 8 HOH 179 1179 220 HOH HOH A . N 8 HOH 180 1180 222 HOH HOH A . N 8 HOH 181 1181 227 HOH HOH A . N 8 HOH 182 1182 229 HOH HOH A . N 8 HOH 183 1183 230 HOH HOH A . N 8 HOH 184 1184 231 HOH HOH A . N 8 HOH 185 1185 232 HOH HOH A . N 8 HOH 186 1186 233 HOH HOH A . N 8 HOH 187 1187 234 HOH HOH A . N 8 HOH 188 1188 235 HOH HOH A . N 8 HOH 189 1189 236 HOH HOH A . N 8 HOH 190 1190 238 HOH HOH A . N 8 HOH 191 1191 243 HOH HOH A . N 8 HOH 192 1192 245 HOH HOH A . N 8 HOH 193 1193 246 HOH HOH A . N 8 HOH 194 1194 249 HOH HOH A . N 8 HOH 195 1195 251 HOH HOH A . N 8 HOH 196 1196 255 HOH HOH A . N 8 HOH 197 1197 256 HOH HOH A . N 8 HOH 198 1198 260 HOH HOH A . N 8 HOH 199 1199 265 HOH HOH A . N 8 HOH 200 1200 268 HOH HOH A . N 8 HOH 201 1201 269 HOH HOH A . N 8 HOH 202 1202 270 HOH HOH A . N 8 HOH 203 1203 272 HOH HOH A . N 8 HOH 204 1204 273 HOH HOH A . N 8 HOH 205 1205 274 HOH HOH A . N 8 HOH 206 1206 275 HOH HOH A . N 8 HOH 207 1207 276 HOH HOH A . N 8 HOH 208 1208 279 HOH HOH A . N 8 HOH 209 1209 280 HOH HOH A . N 8 HOH 210 1210 281 HOH HOH A . N 8 HOH 211 1211 282 HOH HOH A . N 8 HOH 212 1212 283 HOH HOH A . N 8 HOH 213 1213 284 HOH HOH A . N 8 HOH 214 1214 225 HOH HOH A . O 8 HOH 1 101 30 HOH HOH B . O 8 HOH 2 102 47 HOH HOH B . O 8 HOH 3 103 114 HOH HOH B . O 8 HOH 4 104 168 HOH HOH B . O 8 HOH 5 105 185 HOH HOH B . O 8 HOH 6 106 202 HOH HOH B . O 8 HOH 7 107 224 HOH HOH B . O 8 HOH 8 108 247 HOH HOH B . P 8 HOH 1 201 55 HOH HOH C . P 8 HOH 2 202 66 HOH HOH C . P 8 HOH 3 203 68 HOH HOH C . P 8 HOH 4 204 73 HOH HOH C . P 8 HOH 5 205 101 HOH HOH C . P 8 HOH 6 206 102 HOH HOH C . P 8 HOH 7 207 111 HOH HOH C . P 8 HOH 8 208 126 HOH HOH C . P 8 HOH 9 209 145 HOH HOH C . P 8 HOH 10 210 192 HOH HOH C . P 8 HOH 11 211 195 HOH HOH C . P 8 HOH 12 212 208 HOH HOH C . P 8 HOH 13 213 213 HOH HOH C . P 8 HOH 14 214 228 HOH HOH C . P 8 HOH 15 215 239 HOH HOH C . P 8 HOH 16 216 244 HOH HOH C . P 8 HOH 17 217 259 HOH HOH C . P 8 HOH 18 218 264 HOH HOH C . P 8 HOH 19 219 271 HOH HOH C . P 8 HOH 20 220 278 HOH HOH C . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 C DGP 101 ? P ? L DGP 1 P 2 1 N 1 C DGP 101 ? OP1 ? L DGP 1 OP1 3 1 N 1 C DGP 101 ? OP2 ? L DGP 1 OP2 4 1 N 1 C DGP 101 ? OP3 ? L DGP 1 OP3 5 1 N 1 C DGP 101 ? "O5'" ? L DGP 1 "O5'" 6 1 N 1 C DGP 101 ? "C5'" ? L DGP 1 "C5'" 7 1 N 1 C DGP 101 ? "C4'" ? L DGP 1 "C4'" 8 1 N 1 C DGP 101 ? "O4'" ? L DGP 1 "O4'" 9 1 N 1 C DGP 101 ? "C3'" ? L DGP 1 "C3'" 10 1 N 1 C DGP 101 ? "O3'" ? L DGP 1 "O3'" 11 1 N 1 C DGP 101 ? "C2'" ? L DGP 1 "C2'" # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0109 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 4DSI _cell.length_a 88.573 _cell.length_b 93.387 _cell.length_c 105.928 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4DSI _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4DSI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.02 _exptl_crystal.density_percent_sol 59.22 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '0.01 M cobalt chloride, 0.1 M MES (pH 6.5), 1.8 M ammonium sulfate, VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2011-01-01 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Mirrors _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 4DSI _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 70.05 _reflns.d_resolution_high 2.05 _reflns.number_obs 54369 _reflns.number_all 55763 _reflns.percent_possible_obs 97.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.075 _reflns.pdbx_netI_over_sigmaI 13.3 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.05 _reflns_shell.d_res_low 2.12 _reflns_shell.percent_possible_all 90.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.337 _reflns_shell.meanI_over_sigI_obs 1.8 _reflns_shell.pdbx_redundancy 2.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 5503 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4DSI _refine.ls_number_reflns_obs 51429 _refine.ls_number_reflns_all 55763 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 70.05 _refine.ls_d_res_high 2.05 _refine.ls_percent_reflns_obs 97.10 _refine.ls_R_factor_obs 0.19322 _refine.ls_R_factor_all 0.19322 _refine.ls_R_factor_R_work 0.19103 _refine.ls_R_factor_R_free 0.23391 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 2753 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.953 _refine.correlation_coeff_Fo_to_Fc_free 0.932 _refine.B_iso_mean 31.094 _refine.aniso_B[1][1] 2.18 _refine.aniso_B[2][2] -0.77 _refine.aniso_B[3][3] -1.41 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB 3HT3' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.170 _refine.pdbx_overall_ESU_R_Free 0.159 _refine.overall_SU_ML 0.118 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.493 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4659 _refine_hist.pdbx_number_atoms_nucleic_acid 366 _refine_hist.pdbx_number_atoms_ligand 58 _refine_hist.number_atoms_solvent 242 _refine_hist.number_atoms_total 5325 _refine_hist.d_res_high 2.05 _refine_hist.d_res_low 70.05 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.018 0.022 ? 5223 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.800 2.073 ? 7132 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.293 5.000 ? 586 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 34.891 24.156 ? 231 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 18.190 15.000 ? 884 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 21.156 15.000 ? 39 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.122 0.200 ? 796 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.008 0.021 ? 3785 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 0.918 1.500 ? 2911 ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1.781 2.000 ? 4700 ? 'X-RAY DIFFRACTION' r_scbond_it 2.980 3.000 ? 2312 ? 'X-RAY DIFFRACTION' r_scangle_it 4.792 4.500 ? 2429 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.050 _refine_ls_shell.d_res_low 2.103 _refine_ls_shell.number_reflns_R_work 3378 _refine_ls_shell.R_factor_R_work 0.291 _refine_ls_shell.percent_reflns_obs 88.32 _refine_ls_shell.R_factor_R_free 0.303 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 213 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4DSI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4DSI _struct.title 'Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with duplex DNA, Se-dGTP and Calcium' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DSI _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text ;DNA polymerase, polymerization fidelity, calcium cation, purine selectivity, blunt end extension, base stacking, DNA synthesis, TRANSFERASE-DNA complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 6 ? M N N 7 ? N N N 8 ? O N N 8 ? P N N 8 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP D9N168_GEOSE D9N168 1 ;KMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKRAA VALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWEL ERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVI LFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPATKKVHTIFNQALTQTGRLS STEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEV TPNMRRQAKAVNFGIPYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDIT SRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAVT LRVPLKVDYHYGSTWYDAK ; 1 ? 2 PDB 4DSI 4DSI 2 ATCCGAGTCAGG 1 ? 3 PDB 4DSI 4DSI 3 CCTGACTCG 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4DSI A 3 ? 581 ? D9N168 1 ? 579 ? 298 876 2 2 4DSI B 1 ? 12 ? 4DSI 1 ? 12 ? 1 12 3 3 4DSI C 1 ? 9 ? 4DSI 1 ? 9 ? 1 9 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4DSI GLY A 1 ? UNP D9N168 ? ? 'expression tag' 296 1 1 4DSI SER A 2 ? UNP D9N168 ? ? 'expression tag' 297 2 1 4DSI ASP A 303 ? UNP D9N168 ALA 301 'engineered mutation' 598 3 1 4DSI VAL A 418 ? UNP D9N168 PRO 416 'engineered mutation' 713 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6360 ? 1 MORE -73 ? 1 'SSA (A^2)' 27460 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 13 ? ALA A 18 ? THR A 308 ALA A 313 5 ? 6 HELX_P HELX_P2 2 ARG A 52 ? LEU A 57 ? ARG A 347 LEU A 352 1 ? 6 HELX_P HELX_P3 3 ASP A 59 ? ASP A 68 ? ASP A 354 ASP A 363 1 ? 10 HELX_P HELX_P4 4 ASP A 77 ? TRP A 87 ? ASP A 372 TRP A 382 1 ? 11 HELX_P HELX_P5 5 LEU A 99 ? ASP A 107 ? LEU A 394 ASP A 402 1 ? 9 HELX_P HELX_P6 6 PRO A 108 ? GLY A 111 ? PRO A 403 GLY A 406 5 ? 4 HELX_P HELX_P7 7 ASP A 114 ? MET A 121 ? ASP A 409 MET A 416 1 ? 8 HELX_P HELX_P8 8 PRO A 129 ? GLY A 135 ? PRO A 424 GLY A 430 1 ? 7 HELX_P HELX_P9 9 ASP A 144 ? ASN A 173 ? ASP A 439 ASN A 468 1 ? 30 HELX_P HELX_P10 10 GLN A 175 ? LEU A 182 ? GLN A 470 LEU A 477 1 ? 8 HELX_P HELX_P11 11 LEU A 182 ? GLY A 197 ? LEU A 477 GLY A 492 1 ? 16 HELX_P HELX_P12 12 ASP A 201 ? ALA A 227 ? ASP A 496 ALA A 522 1 ? 27 HELX_P HELX_P13 13 SER A 235 ? GLU A 245 ? SER A 530 GLU A 540 1 ? 11 HELX_P HELX_P14 14 SER A 262 ? ALA A 270 ? SER A 557 ALA A 565 1 ? 9 HELX_P HELX_P15 15 PRO A 271 ? HIS A 273 ? PRO A 566 HIS A 568 5 ? 3 HELX_P HELX_P16 16 GLU A 274 ? ILE A 293 ? GLU A 569 ILE A 588 1 ? 20 HELX_P HELX_P17 17 ILE A 293 ? VAL A 300 ? ILE A 588 VAL A 595 1 ? 8 HELX_P HELX_P18 18 LEU A 335 ? LYS A 340 ? LEU A 630 LYS A 635 1 ? 6 HELX_P HELX_P19 19 ILE A 341 ? GLN A 343 ? ILE A 636 GLN A 638 5 ? 3 HELX_P HELX_P20 20 GLN A 361 ? GLU A 372 ? GLN A 656 GLU A 667 1 ? 12 HELX_P HELX_P21 21 ASP A 373 ? ARG A 382 ? ASP A 668 ARG A 677 1 ? 10 HELX_P HELX_P22 22 ASP A 385 ? GLN A 396 ? ASP A 680 GLN A 691 1 ? 12 HELX_P HELX_P23 23 SER A 398 ? VAL A 402 ? SER A 693 VAL A 697 5 ? 5 HELX_P HELX_P24 24 THR A 403 ? ILE A 417 ? THR A 698 ILE A 712 1 ? 15 HELX_P HELX_P25 25 VAL A 418 ? GLY A 420 ? VAL A 713 GLY A 715 5 ? 3 HELX_P HELX_P26 26 SER A 422 ? ASN A 431 ? SER A 717 ASN A 726 1 ? 10 HELX_P HELX_P27 27 SER A 433 ? PHE A 448 ? SER A 728 PHE A 743 1 ? 16 HELX_P HELX_P28 28 PHE A 448 ? GLY A 466 ? PHE A 743 GLY A 761 1 ? 19 HELX_P HELX_P29 29 PRO A 479 ? SER A 483 ? PRO A 774 SER A 778 5 ? 5 HELX_P HELX_P30 30 ASN A 485 ? ARG A 524 ? ASN A 780 ARG A 819 1 ? 40 HELX_P HELX_P31 31 GLU A 545 ? ALA A 560 ? GLU A 840 ALA A 855 1 ? 16 HELX_P HELX_P32 32 THR A 576 ? ALA A 580 ? THR A 871 ALA A 875 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C DC 8 OP1 ? ? ? 1_555 M CA . CA ? ? C DC 8 C CA 102 1_555 ? ? ? ? ? ? ? 2.214 ? ? hydrog1 hydrog ? ? B DC 4 N3 ? ? ? 1_555 C DG 9 N1 ? ? B DC 4 C DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 4 N4 ? ? ? 1_555 C DG 9 O6 ? ? B DC 4 C DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 4 O2 ? ? ? 1_555 C DG 9 N2 ? ? B DC 4 C DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 5 N1 ? ? ? 1_555 C DC 8 N3 ? ? B DG 5 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 5 N2 ? ? ? 1_555 C DC 8 O2 ? ? B DG 5 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 5 O6 ? ? ? 1_555 C DC 8 N4 ? ? B DG 5 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DA 6 N1 ? ? ? 1_555 C DT 7 N3 ? ? B DA 6 C DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DA 6 N6 ? ? ? 1_555 C DT 7 O4 ? ? B DA 6 C DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 7 N1 ? ? ? 1_555 C DC 6 N3 ? ? B DG 7 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 7 N2 ? ? ? 1_555 C DC 6 O2 ? ? B DG 7 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 7 O6 ? ? ? 1_555 C DC 6 N4 ? ? B DG 7 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DT 8 N3 ? ? ? 1_555 C DA 5 N1 ? ? B DT 8 C DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DT 8 O4 ? ? ? 1_555 C DA 5 N6 ? ? B DT 8 C DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 9 N3 ? ? ? 1_555 C DG 4 N1 ? ? B DC 9 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 9 N4 ? ? ? 1_555 C DG 4 O6 ? ? B DC 9 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 9 O2 ? ? ? 1_555 C DG 4 N2 ? ? B DC 9 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DA 10 N1 ? ? ? 1_555 C DT 3 N3 ? ? B DA 10 C DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DA 10 N6 ? ? ? 1_555 C DT 3 O4 ? ? B DA 10 C DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DG 11 N1 ? ? ? 1_555 C DC 2 N3 ? ? B DG 11 C DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 11 N2 ? ? ? 1_555 C DC 2 O2 ? ? B DG 11 C DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DG 11 O6 ? ? ? 1_555 C DC 2 N4 ? ? B DG 11 C DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 12 N1 ? ? ? 1_555 C DC 1 N3 ? ? B DG 12 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DG 12 N2 ? ? ? 1_555 C DC 1 O2 ? ? B DG 12 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DG 12 O6 ? ? ? 1_555 C DC 1 N4 ? ? B DG 12 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 325 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 620 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 326 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 621 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.72 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? C ? 2 ? D ? 4 ? E ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 7 ? LEU A 8 ? THR A 302 LEU A 303 A 2 GLY A 47 ? LEU A 51 ? GLY A 342 LEU A 346 A 3 GLY A 39 ? ASN A 44 ? GLY A 334 ASN A 339 A 4 LYS A 20 ? GLU A 26 ? LYS A 315 GLU A 321 A 5 LYS A 72 ? MET A 75 ? LYS A 367 MET A 370 A 6 VAL A 95 ? ASP A 98 ? VAL A 390 ASP A 393 B 1 LYS A 306 ? VAL A 307 ? LYS A 601 VAL A 602 B 2 VAL A 198 ? VAL A 200 ? VAL A 493 VAL A 495 B 3 PHE A 345 ? VAL A 346 ? PHE A 640 VAL A 641 C 1 ILE A 310 ? ASN A 312 ? ILE A 605 ASN A 607 C 2 SER A 322 ? THR A 324 ? SER A 617 THR A 619 D 1 HIS A 528 ? GLN A 532 ? HIS A 823 GLN A 827 D 2 GLU A 536 ? PRO A 542 ? GLU A 831 PRO A 837 D 3 TRP A 352 ? TYR A 359 ? TRP A 647 TYR A 654 D 4 VAL A 569 ? GLY A 574 ? VAL A 864 GLY A 869 E 1 TYR A 467 ? THR A 469 ? TYR A 762 THR A 764 E 2 ARG A 475 ? TYR A 477 ? ARG A 770 TYR A 772 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 7 ? N THR A 302 O ARG A 48 ? O ARG A 343 A 2 3 O PHE A 49 ? O PHE A 344 N VAL A 42 ? N VAL A 337 A 3 4 O VAL A 43 ? O VAL A 338 N ALA A 22 ? N ALA A 317 A 4 5 N LEU A 23 ? N LEU A 318 O SER A 74 ? O SER A 369 A 5 6 N MET A 75 ? N MET A 370 O PHE A 97 ? O PHE A 392 B 1 2 O VAL A 307 ? O VAL A 602 N VAL A 198 ? N VAL A 493 B 2 3 N LYS A 199 ? N LYS A 494 O VAL A 346 ? O VAL A 641 C 1 2 N ASN A 312 ? N ASN A 607 O SER A 322 ? O SER A 617 D 1 2 N LEU A 530 ? N LEU A 825 O ILE A 538 ? O ILE A 833 D 2 3 O LEU A 539 ? O LEU A 834 N PHE A 355 ? N PHE A 650 D 3 4 N ALA A 356 ? N ALA A 651 O HIS A 572 ? O HIS A 867 E 1 2 N VAL A 468 ? N VAL A 763 O ARG A 476 ? O ARG A 771 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 901 ? 9 'BINDING SITE FOR RESIDUE GOL A 901' AC2 Software A GOL 902 ? 8 'BINDING SITE FOR RESIDUE GOL A 902' AC3 Software A GOL 903 ? 4 'BINDING SITE FOR RESIDUE GOL A 903' AC4 Software A GOL 904 ? 8 'BINDING SITE FOR RESIDUE GOL A 904' AC5 Software A GOL 905 ? 4 'BINDING SITE FOR RESIDUE GOL A 905' AC6 Software A SO4 906 ? 4 'BINDING SITE FOR RESIDUE SO4 A 906' AC7 Software A SO4 907 ? 5 'BINDING SITE FOR RESIDUE SO4 A 907' AC8 Software A SO4 908 ? 4 'BINDING SITE FOR RESIDUE SO4 A 908' AC9 Software C DGP 101 ? 2 'BINDING SITE FOR RESIDUE DGP C 101' BC1 Software C CA 102 ? 4 'BINDING SITE FOR RESIDUE CA C 102' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 GLU A 26 ? GLU A 321 . ? 1_555 ? 2 AC1 9 PHE A 76 ? PHE A 371 . ? 1_555 ? 3 AC1 9 ARG A 80 ? ARG A 375 . ? 1_555 ? 4 AC1 9 ASP A 114 ? ASP A 409 . ? 1_555 ? 5 AC1 9 VAL A 115 ? VAL A 410 . ? 1_555 ? 6 AC1 9 ASP A 130 ? ASP A 425 . ? 1_555 ? 7 AC1 9 LYS A 155 ? LYS A 450 . ? 1_555 ? 8 AC1 9 HOH N . ? HOH A 1154 . ? 1_555 ? 9 AC1 9 HOH N . ? HOH A 1198 . ? 1_555 ? 10 AC2 8 THR A 291 ? THR A 586 . ? 1_555 ? 11 AC2 8 TYR A 292 ? TYR A 587 . ? 1_555 ? 12 AC2 8 LEU A 296 ? LEU A 591 . ? 1_555 ? 13 AC2 8 PRO A 326 ? PRO A 621 . ? 1_555 ? 14 AC2 8 ASN A 327 ? ASN A 622 . ? 1_555 ? 15 AC2 8 ASN A 330 ? ASN A 625 . ? 1_555 ? 16 AC2 8 HOH N . ? HOH A 1080 . ? 1_555 ? 17 AC2 8 DA C 5 ? DA C 5 . ? 1_555 ? 18 AC3 4 TRP A 87 ? TRP A 382 . ? 1_555 ? 19 AC3 4 PHE A 195 ? PHE A 490 . ? 1_555 ? 20 AC3 4 ALA A 196 ? ALA A 491 . ? 1_555 ? 21 AC3 4 LYS A 306 ? LYS A 601 . ? 1_555 ? 22 AC4 8 TYR A 32 ? TYR A 327 . ? 1_555 ? 23 AC4 8 ASP A 77 ? ASP A 372 . ? 1_555 ? 24 AC4 8 LYS A 79 ? LYS A 374 . ? 1_555 ? 25 AC4 8 PHE A 311 ? PHE A 606 . ? 1_555 ? 26 AC4 8 ASN A 312 ? ASN A 607 . ? 1_555 ? 27 AC4 8 GLN A 313 ? GLN A 608 . ? 1_555 ? 28 AC4 8 HOH N . ? HOH A 1027 . ? 1_555 ? 29 AC4 8 HOH N . ? HOH A 1043 . ? 1_555 ? 30 AC5 4 GLY A 420 ? GLY A 715 . ? 1_555 ? 31 AC5 4 ILE A 421 ? ILE A 716 . ? 1_555 ? 32 AC5 4 PHE A 445 ? PHE A 740 . ? 1_555 ? 33 AC5 4 MET A 455 ? MET A 750 . ? 1_555 ? 34 AC6 4 MET A 4 ? MET A 299 . ? 1_555 ? 35 AC6 4 ALA A 5 ? ALA A 300 . ? 1_555 ? 36 AC6 4 ARG A 48 ? ARG A 343 . ? 1_555 ? 37 AC6 4 ARG A 382 ? ARG A 677 . ? 3_545 ? 38 AC7 5 TYR A 419 ? TYR A 714 . ? 1_555 ? 39 AC7 5 PHE A 491 ? PHE A 786 . ? 1_555 ? 40 AC7 5 ARG A 494 ? ARG A 789 . ? 1_555 ? 41 AC7 5 HOH N . ? HOH A 1085 . ? 1_555 ? 42 AC7 5 DC C 1 ? DC C 1 . ? 1_555 ? 43 AC8 4 HIS A 387 ? HIS A 682 . ? 1_555 ? 44 AC8 4 ARG A 407 ? ARG A 702 . ? 1_555 ? 45 AC8 4 LYS A 411 ? LYS A 706 . ? 1_555 ? 46 AC8 4 HOH N . ? HOH A 1158 . ? 1_555 ? 47 AC9 2 DC B 4 ? DC B 4 . ? 1_555 ? 48 AC9 2 DG C 9 ? DG C 9 . ? 1_555 ? 49 BC1 4 ASN A 232 ? ASN A 527 . ? 1_555 ? 50 BC1 4 ASN A 234 ? ASN A 529 . ? 1_555 ? 51 BC1 4 DT C 7 ? DT C 7 . ? 1_555 ? 52 BC1 4 DC C 8 ? DC C 8 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" B DG 12 ? ? "C3'" B DG 12 ? ? 1.348 1.419 -0.071 0.006 N 2 1 C5 C DT 3 ? ? C7 C DT 3 ? ? 1.539 1.496 0.043 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 103.52 108.00 -4.48 0.70 N 2 1 "C1'" B DT 8 ? ? "O4'" B DT 8 ? ? "C4'" B DT 8 ? ? 103.88 110.10 -6.22 1.00 N 3 1 "O5'" B DC 9 ? ? "C5'" B DC 9 ? ? "C4'" B DC 9 ? ? 104.55 109.40 -4.85 0.80 N 4 1 "O4'" B DC 9 ? ? "C1'" B DC 9 ? ? N1 B DC 9 ? ? 110.48 108.30 2.18 0.30 N 5 1 "C3'" B DC 9 ? ? "O3'" B DC 9 ? ? P B DA 10 ? ? 127.13 119.70 7.43 1.20 Y 6 1 "C4'" B DA 10 ? ? "C3'" B DA 10 ? ? "C2'" B DA 10 ? ? 96.62 102.20 -5.58 0.70 N 7 1 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 111.44 108.30 3.14 0.30 N 8 1 OP1 C DC 2 ? ? P C DC 2 ? ? OP2 C DC 2 ? ? 130.50 119.60 10.90 1.50 N 9 1 "O4'" C DT 3 ? ? "C1'" C DT 3 ? ? N1 C DT 3 ? ? 113.23 108.30 4.93 0.30 N 10 1 "O4'" C DG 9 ? ? "C1'" C DG 9 ? ? N9 C DG 9 ? ? 112.62 108.30 4.32 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 402 ? ? -164.14 93.07 2 1 ALA A 421 ? ? -80.73 49.55 3 1 LYS A 431 ? ? -124.29 -54.57 4 1 LEU A 477 ? ? -121.74 -67.34 5 1 GLN A 524 ? ? 175.12 157.95 6 1 GLU A 540 ? ? -124.58 -55.57 7 1 ILE A 588 ? ? -96.87 -71.21 8 1 ILE A 628 ? ? -139.45 -31.11 9 1 GLN A 691 ? ? 39.88 59.73 10 1 HIS A 829 ? ? 72.00 -55.23 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B DA 1 ? B DA 1 2 1 Y 1 B DT 2 ? B DT 2 3 1 Y 1 B DC 3 ? B DC 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DA OP3 O N N 89 DA P P N N 90 DA OP1 O N N 91 DA OP2 O N N 92 DA "O5'" O N N 93 DA "C5'" C N N 94 DA "C4'" C N R 95 DA "O4'" O N N 96 DA "C3'" C N S 97 DA "O3'" O N N 98 DA "C2'" C N N 99 DA "C1'" C N R 100 DA N9 N Y N 101 DA C8 C Y N 102 DA N7 N Y N 103 DA C5 C Y N 104 DA C6 C Y N 105 DA N6 N N N 106 DA N1 N Y N 107 DA C2 C Y N 108 DA N3 N Y N 109 DA C4 C Y N 110 DA HOP3 H N N 111 DA HOP2 H N N 112 DA "H5'" H N N 113 DA "H5''" H N N 114 DA "H4'" H N N 115 DA "H3'" H N N 116 DA "HO3'" H N N 117 DA "H2'" H N N 118 DA "H2''" H N N 119 DA "H1'" H N N 120 DA H8 H N N 121 DA H61 H N N 122 DA H62 H N N 123 DA H2 H N N 124 DC OP3 O N N 125 DC P P N N 126 DC OP1 O N N 127 DC OP2 O N N 128 DC "O5'" O N N 129 DC "C5'" C N N 130 DC "C4'" C N R 131 DC "O4'" O N N 132 DC "C3'" C N S 133 DC "O3'" O N N 134 DC "C2'" C N N 135 DC "C1'" C N R 136 DC N1 N N N 137 DC C2 C N N 138 DC O2 O N N 139 DC N3 N N N 140 DC C4 C N N 141 DC N4 N N N 142 DC C5 C N N 143 DC C6 C N N 144 DC HOP3 H N N 145 DC HOP2 H N N 146 DC "H5'" H N N 147 DC "H5''" H N N 148 DC "H4'" H N N 149 DC "H3'" H N N 150 DC "HO3'" H N N 151 DC "H2'" H N N 152 DC "H2''" H N N 153 DC "H1'" H N N 154 DC H41 H N N 155 DC H42 H N N 156 DC H5 H N N 157 DC H6 H N N 158 DG OP3 O N N 159 DG P P N N 160 DG OP1 O N N 161 DG OP2 O N N 162 DG "O5'" O N N 163 DG "C5'" C N N 164 DG "C4'" C N R 165 DG "O4'" O N N 166 DG "C3'" C N S 167 DG "O3'" O N N 168 DG "C2'" C N N 169 DG "C1'" C N R 170 DG N9 N Y N 171 DG C8 C Y N 172 DG N7 N Y N 173 DG C5 C Y N 174 DG C6 C N N 175 DG O6 O N N 176 DG N1 N N N 177 DG C2 C N N 178 DG N2 N N N 179 DG N3 N N N 180 DG C4 C Y N 181 DG HOP3 H N N 182 DG HOP2 H N N 183 DG "H5'" H N N 184 DG "H5''" H N N 185 DG "H4'" H N N 186 DG "H3'" H N N 187 DG "HO3'" H N N 188 DG "H2'" H N N 189 DG "H2''" H N N 190 DG "H1'" H N N 191 DG H8 H N N 192 DG H1 H N N 193 DG H21 H N N 194 DG H22 H N N 195 DGP P P N N 196 DGP OP1 O N N 197 DGP OP2 O N N 198 DGP OP3 O N N 199 DGP "O5'" O N N 200 DGP "C5'" C N N 201 DGP "C4'" C N R 202 DGP "O4'" O N N 203 DGP "C3'" C N S 204 DGP "O3'" O N N 205 DGP "C2'" C N N 206 DGP "C1'" C N R 207 DGP N9 N Y N 208 DGP C8 C Y N 209 DGP N7 N Y N 210 DGP C5 C Y N 211 DGP C6 C N N 212 DGP O6 O N N 213 DGP N1 N N N 214 DGP C2 C N N 215 DGP N2 N N N 216 DGP N3 N N N 217 DGP C4 C Y N 218 DGP HOP2 H N N 219 DGP HOP3 H N N 220 DGP "H5'" H N N 221 DGP "H5''" H N N 222 DGP "H4'" H N N 223 DGP "H3'" H N N 224 DGP "HO3'" H N N 225 DGP "H2'" H N N 226 DGP "H2''" H N N 227 DGP "H1'" H N N 228 DGP H8 H N N 229 DGP HN1 H N N 230 DGP HN21 H N N 231 DGP HN22 H N N 232 DT OP3 O N N 233 DT P P N N 234 DT OP1 O N N 235 DT OP2 O N N 236 DT "O5'" O N N 237 DT "C5'" C N N 238 DT "C4'" C N R 239 DT "O4'" O N N 240 DT "C3'" C N S 241 DT "O3'" O N N 242 DT "C2'" C N N 243 DT "C1'" C N R 244 DT N1 N N N 245 DT C2 C N N 246 DT O2 O N N 247 DT N3 N N N 248 DT C4 C N N 249 DT O4 O N N 250 DT C5 C N N 251 DT C7 C N N 252 DT C6 C N N 253 DT HOP3 H N N 254 DT HOP2 H N N 255 DT "H5'" H N N 256 DT "H5''" H N N 257 DT "H4'" H N N 258 DT "H3'" H N N 259 DT "HO3'" H N N 260 DT "H2'" H N N 261 DT "H2''" H N N 262 DT "H1'" H N N 263 DT H3 H N N 264 DT H71 H N N 265 DT H72 H N N 266 DT H73 H N N 267 DT H6 H N N 268 GLN N N N N 269 GLN CA C N S 270 GLN C C N N 271 GLN O O N N 272 GLN CB C N N 273 GLN CG C N N 274 GLN CD C N N 275 GLN OE1 O N N 276 GLN NE2 N N N 277 GLN OXT O N N 278 GLN H H N N 279 GLN H2 H N N 280 GLN HA H N N 281 GLN HB2 H N N 282 GLN HB3 H N N 283 GLN HG2 H N N 284 GLN HG3 H N N 285 GLN HE21 H N N 286 GLN HE22 H N N 287 GLN HXT H N N 288 GLU N N N N 289 GLU CA C N S 290 GLU C C N N 291 GLU O O N N 292 GLU CB C N N 293 GLU CG C N N 294 GLU CD C N N 295 GLU OE1 O N N 296 GLU OE2 O N N 297 GLU OXT O N N 298 GLU H H N N 299 GLU H2 H N N 300 GLU HA H N N 301 GLU HB2 H N N 302 GLU HB3 H N N 303 GLU HG2 H N N 304 GLU HG3 H N N 305 GLU HE2 H N N 306 GLU HXT H N N 307 GLY N N N N 308 GLY CA C N N 309 GLY C C N N 310 GLY O O N N 311 GLY OXT O N N 312 GLY H H N N 313 GLY H2 H N N 314 GLY HA2 H N N 315 GLY HA3 H N N 316 GLY HXT H N N 317 GOL C1 C N N 318 GOL O1 O N N 319 GOL C2 C N N 320 GOL O2 O N N 321 GOL C3 C N N 322 GOL O3 O N N 323 GOL H11 H N N 324 GOL H12 H N N 325 GOL HO1 H N N 326 GOL H2 H N N 327 GOL HO2 H N N 328 GOL H31 H N N 329 GOL H32 H N N 330 GOL HO3 H N N 331 HIS N N N N 332 HIS CA C N S 333 HIS C C N N 334 HIS O O N N 335 HIS CB C N N 336 HIS CG C Y N 337 HIS ND1 N Y N 338 HIS CD2 C Y N 339 HIS CE1 C Y N 340 HIS NE2 N Y N 341 HIS OXT O N N 342 HIS H H N N 343 HIS H2 H N N 344 HIS HA H N N 345 HIS HB2 H N N 346 HIS HB3 H N N 347 HIS HD1 H N N 348 HIS HD2 H N N 349 HIS HE1 H N N 350 HIS HE2 H N N 351 HIS HXT H N N 352 HOH O O N N 353 HOH H1 H N N 354 HOH H2 H N N 355 ILE N N N N 356 ILE CA C N S 357 ILE C C N N 358 ILE O O N N 359 ILE CB C N S 360 ILE CG1 C N N 361 ILE CG2 C N N 362 ILE CD1 C N N 363 ILE OXT O N N 364 ILE H H N N 365 ILE H2 H N N 366 ILE HA H N N 367 ILE HB H N N 368 ILE HG12 H N N 369 ILE HG13 H N N 370 ILE HG21 H N N 371 ILE HG22 H N N 372 ILE HG23 H N N 373 ILE HD11 H N N 374 ILE HD12 H N N 375 ILE HD13 H N N 376 ILE HXT H N N 377 LEU N N N N 378 LEU CA C N S 379 LEU C C N N 380 LEU O O N N 381 LEU CB C N N 382 LEU CG C N N 383 LEU CD1 C N N 384 LEU CD2 C N N 385 LEU OXT O N N 386 LEU H H N N 387 LEU H2 H N N 388 LEU HA H N N 389 LEU HB2 H N N 390 LEU HB3 H N N 391 LEU HG H N N 392 LEU HD11 H N N 393 LEU HD12 H N N 394 LEU HD13 H N N 395 LEU HD21 H N N 396 LEU HD22 H N N 397 LEU HD23 H N N 398 LEU HXT H N N 399 LYS N N N N 400 LYS CA C N S 401 LYS C C N N 402 LYS O O N N 403 LYS CB C N N 404 LYS CG C N N 405 LYS CD C N N 406 LYS CE C N N 407 LYS NZ N N N 408 LYS OXT O N N 409 LYS H H N N 410 LYS H2 H N N 411 LYS HA H N N 412 LYS HB2 H N N 413 LYS HB3 H N N 414 LYS HG2 H N N 415 LYS HG3 H N N 416 LYS HD2 H N N 417 LYS HD3 H N N 418 LYS HE2 H N N 419 LYS HE3 H N N 420 LYS HZ1 H N N 421 LYS HZ2 H N N 422 LYS HZ3 H N N 423 LYS HXT H N N 424 MET N N N N 425 MET CA C N S 426 MET C C N N 427 MET O O N N 428 MET CB C N N 429 MET CG C N N 430 MET SD S N N 431 MET CE C N N 432 MET OXT O N N 433 MET H H N N 434 MET H2 H N N 435 MET HA H N N 436 MET HB2 H N N 437 MET HB3 H N N 438 MET HG2 H N N 439 MET HG3 H N N 440 MET HE1 H N N 441 MET HE2 H N N 442 MET HE3 H N N 443 MET HXT H N N 444 PHE N N N N 445 PHE CA C N S 446 PHE C C N N 447 PHE O O N N 448 PHE CB C N N 449 PHE CG C Y N 450 PHE CD1 C Y N 451 PHE CD2 C Y N 452 PHE CE1 C Y N 453 PHE CE2 C Y N 454 PHE CZ C Y N 455 PHE OXT O N N 456 PHE H H N N 457 PHE H2 H N N 458 PHE HA H N N 459 PHE HB2 H N N 460 PHE HB3 H N N 461 PHE HD1 H N N 462 PHE HD2 H N N 463 PHE HE1 H N N 464 PHE HE2 H N N 465 PHE HZ H N N 466 PHE HXT H N N 467 PRO N N N N 468 PRO CA C N S 469 PRO C C N N 470 PRO O O N N 471 PRO CB C N N 472 PRO CG C N N 473 PRO CD C N N 474 PRO OXT O N N 475 PRO H H N N 476 PRO HA H N N 477 PRO HB2 H N N 478 PRO HB3 H N N 479 PRO HG2 H N N 480 PRO HG3 H N N 481 PRO HD2 H N N 482 PRO HD3 H N N 483 PRO HXT H N N 484 SER N N N N 485 SER CA C N S 486 SER C C N N 487 SER O O N N 488 SER CB C N N 489 SER OG O N N 490 SER OXT O N N 491 SER H H N N 492 SER H2 H N N 493 SER HA H N N 494 SER HB2 H N N 495 SER HB3 H N N 496 SER HG H N N 497 SER HXT H N N 498 SO4 S S N N 499 SO4 O1 O N N 500 SO4 O2 O N N 501 SO4 O3 O N N 502 SO4 O4 O N N 503 THR N N N N 504 THR CA C N S 505 THR C C N N 506 THR O O N N 507 THR CB C N R 508 THR OG1 O N N 509 THR CG2 C N N 510 THR OXT O N N 511 THR H H N N 512 THR H2 H N N 513 THR HA H N N 514 THR HB H N N 515 THR HG1 H N N 516 THR HG21 H N N 517 THR HG22 H N N 518 THR HG23 H N N 519 THR HXT H N N 520 TRP N N N N 521 TRP CA C N S 522 TRP C C N N 523 TRP O O N N 524 TRP CB C N N 525 TRP CG C Y N 526 TRP CD1 C Y N 527 TRP CD2 C Y N 528 TRP NE1 N Y N 529 TRP CE2 C Y N 530 TRP CE3 C Y N 531 TRP CZ2 C Y N 532 TRP CZ3 C Y N 533 TRP CH2 C Y N 534 TRP OXT O N N 535 TRP H H N N 536 TRP H2 H N N 537 TRP HA H N N 538 TRP HB2 H N N 539 TRP HB3 H N N 540 TRP HD1 H N N 541 TRP HE1 H N N 542 TRP HE3 H N N 543 TRP HZ2 H N N 544 TRP HZ3 H N N 545 TRP HH2 H N N 546 TRP HXT H N N 547 TYR N N N N 548 TYR CA C N S 549 TYR C C N N 550 TYR O O N N 551 TYR CB C N N 552 TYR CG C Y N 553 TYR CD1 C Y N 554 TYR CD2 C Y N 555 TYR CE1 C Y N 556 TYR CE2 C Y N 557 TYR CZ C Y N 558 TYR OH O N N 559 TYR OXT O N N 560 TYR H H N N 561 TYR H2 H N N 562 TYR HA H N N 563 TYR HB2 H N N 564 TYR HB3 H N N 565 TYR HD1 H N N 566 TYR HD2 H N N 567 TYR HE1 H N N 568 TYR HE2 H N N 569 TYR HH H N N 570 TYR HXT H N N 571 VAL N N N N 572 VAL CA C N S 573 VAL C C N N 574 VAL O O N N 575 VAL CB C N N 576 VAL CG1 C N N 577 VAL CG2 C N N 578 VAL OXT O N N 579 VAL H H N N 580 VAL H2 H N N 581 VAL HA H N N 582 VAL HB H N N 583 VAL HG11 H N N 584 VAL HG12 H N N 585 VAL HG13 H N N 586 VAL HG21 H N N 587 VAL HG22 H N N 588 VAL HG23 H N N 589 VAL HXT H N N 590 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DGP P OP1 doub N N 195 DGP P OP2 sing N N 196 DGP P OP3 sing N N 197 DGP P "O5'" sing N N 198 DGP OP2 HOP2 sing N N 199 DGP OP3 HOP3 sing N N 200 DGP "O5'" "C5'" sing N N 201 DGP "C5'" "C4'" sing N N 202 DGP "C5'" "H5'" sing N N 203 DGP "C5'" "H5''" sing N N 204 DGP "C4'" "O4'" sing N N 205 DGP "C4'" "C3'" sing N N 206 DGP "C4'" "H4'" sing N N 207 DGP "O4'" "C1'" sing N N 208 DGP "C3'" "O3'" sing N N 209 DGP "C3'" "C2'" sing N N 210 DGP "C3'" "H3'" sing N N 211 DGP "O3'" "HO3'" sing N N 212 DGP "C2'" "C1'" sing N N 213 DGP "C2'" "H2'" sing N N 214 DGP "C2'" "H2''" sing N N 215 DGP "C1'" N9 sing N N 216 DGP "C1'" "H1'" sing N N 217 DGP N9 C8 sing Y N 218 DGP N9 C4 sing Y N 219 DGP C8 N7 doub Y N 220 DGP C8 H8 sing N N 221 DGP N7 C5 sing Y N 222 DGP C5 C6 sing N N 223 DGP C5 C4 doub Y N 224 DGP C6 O6 doub N N 225 DGP C6 N1 sing N N 226 DGP N1 C2 sing N N 227 DGP N1 HN1 sing N N 228 DGP C2 N2 sing N N 229 DGP C2 N3 doub N N 230 DGP N2 HN21 sing N N 231 DGP N2 HN22 sing N N 232 DGP N3 C4 sing N N 233 DT OP3 P sing N N 234 DT OP3 HOP3 sing N N 235 DT P OP1 doub N N 236 DT P OP2 sing N N 237 DT P "O5'" sing N N 238 DT OP2 HOP2 sing N N 239 DT "O5'" "C5'" sing N N 240 DT "C5'" "C4'" sing N N 241 DT "C5'" "H5'" sing N N 242 DT "C5'" "H5''" sing N N 243 DT "C4'" "O4'" sing N N 244 DT "C4'" "C3'" sing N N 245 DT "C4'" "H4'" sing N N 246 DT "O4'" "C1'" sing N N 247 DT "C3'" "O3'" sing N N 248 DT "C3'" "C2'" sing N N 249 DT "C3'" "H3'" sing N N 250 DT "O3'" "HO3'" sing N N 251 DT "C2'" "C1'" sing N N 252 DT "C2'" "H2'" sing N N 253 DT "C2'" "H2''" sing N N 254 DT "C1'" N1 sing N N 255 DT "C1'" "H1'" sing N N 256 DT N1 C2 sing N N 257 DT N1 C6 sing N N 258 DT C2 O2 doub N N 259 DT C2 N3 sing N N 260 DT N3 C4 sing N N 261 DT N3 H3 sing N N 262 DT C4 O4 doub N N 263 DT C4 C5 sing N N 264 DT C5 C7 sing N N 265 DT C5 C6 doub N N 266 DT C7 H71 sing N N 267 DT C7 H72 sing N N 268 DT C7 H73 sing N N 269 DT C6 H6 sing N N 270 GLN N CA sing N N 271 GLN N H sing N N 272 GLN N H2 sing N N 273 GLN CA C sing N N 274 GLN CA CB sing N N 275 GLN CA HA sing N N 276 GLN C O doub N N 277 GLN C OXT sing N N 278 GLN CB CG sing N N 279 GLN CB HB2 sing N N 280 GLN CB HB3 sing N N 281 GLN CG CD sing N N 282 GLN CG HG2 sing N N 283 GLN CG HG3 sing N N 284 GLN CD OE1 doub N N 285 GLN CD NE2 sing N N 286 GLN NE2 HE21 sing N N 287 GLN NE2 HE22 sing N N 288 GLN OXT HXT sing N N 289 GLU N CA sing N N 290 GLU N H sing N N 291 GLU N H2 sing N N 292 GLU CA C sing N N 293 GLU CA CB sing N N 294 GLU CA HA sing N N 295 GLU C O doub N N 296 GLU C OXT sing N N 297 GLU CB CG sing N N 298 GLU CB HB2 sing N N 299 GLU CB HB3 sing N N 300 GLU CG CD sing N N 301 GLU CG HG2 sing N N 302 GLU CG HG3 sing N N 303 GLU CD OE1 doub N N 304 GLU CD OE2 sing N N 305 GLU OE2 HE2 sing N N 306 GLU OXT HXT sing N N 307 GLY N CA sing N N 308 GLY N H sing N N 309 GLY N H2 sing N N 310 GLY CA C sing N N 311 GLY CA HA2 sing N N 312 GLY CA HA3 sing N N 313 GLY C O doub N N 314 GLY C OXT sing N N 315 GLY OXT HXT sing N N 316 GOL C1 O1 sing N N 317 GOL C1 C2 sing N N 318 GOL C1 H11 sing N N 319 GOL C1 H12 sing N N 320 GOL O1 HO1 sing N N 321 GOL C2 O2 sing N N 322 GOL C2 C3 sing N N 323 GOL C2 H2 sing N N 324 GOL O2 HO2 sing N N 325 GOL C3 O3 sing N N 326 GOL C3 H31 sing N N 327 GOL C3 H32 sing N N 328 GOL O3 HO3 sing N N 329 HIS N CA sing N N 330 HIS N H sing N N 331 HIS N H2 sing N N 332 HIS CA C sing N N 333 HIS CA CB sing N N 334 HIS CA HA sing N N 335 HIS C O doub N N 336 HIS C OXT sing N N 337 HIS CB CG sing N N 338 HIS CB HB2 sing N N 339 HIS CB HB3 sing N N 340 HIS CG ND1 sing Y N 341 HIS CG CD2 doub Y N 342 HIS ND1 CE1 doub Y N 343 HIS ND1 HD1 sing N N 344 HIS CD2 NE2 sing Y N 345 HIS CD2 HD2 sing N N 346 HIS CE1 NE2 sing Y N 347 HIS CE1 HE1 sing N N 348 HIS NE2 HE2 sing N N 349 HIS OXT HXT sing N N 350 HOH O H1 sing N N 351 HOH O H2 sing N N 352 ILE N CA sing N N 353 ILE N H sing N N 354 ILE N H2 sing N N 355 ILE CA C sing N N 356 ILE CA CB sing N N 357 ILE CA HA sing N N 358 ILE C O doub N N 359 ILE C OXT sing N N 360 ILE CB CG1 sing N N 361 ILE CB CG2 sing N N 362 ILE CB HB sing N N 363 ILE CG1 CD1 sing N N 364 ILE CG1 HG12 sing N N 365 ILE CG1 HG13 sing N N 366 ILE CG2 HG21 sing N N 367 ILE CG2 HG22 sing N N 368 ILE CG2 HG23 sing N N 369 ILE CD1 HD11 sing N N 370 ILE CD1 HD12 sing N N 371 ILE CD1 HD13 sing N N 372 ILE OXT HXT sing N N 373 LEU N CA sing N N 374 LEU N H sing N N 375 LEU N H2 sing N N 376 LEU CA C sing N N 377 LEU CA CB sing N N 378 LEU CA HA sing N N 379 LEU C O doub N N 380 LEU C OXT sing N N 381 LEU CB CG sing N N 382 LEU CB HB2 sing N N 383 LEU CB HB3 sing N N 384 LEU CG CD1 sing N N 385 LEU CG CD2 sing N N 386 LEU CG HG sing N N 387 LEU CD1 HD11 sing N N 388 LEU CD1 HD12 sing N N 389 LEU CD1 HD13 sing N N 390 LEU CD2 HD21 sing N N 391 LEU CD2 HD22 sing N N 392 LEU CD2 HD23 sing N N 393 LEU OXT HXT sing N N 394 LYS N CA sing N N 395 LYS N H sing N N 396 LYS N H2 sing N N 397 LYS CA C sing N N 398 LYS CA CB sing N N 399 LYS CA HA sing N N 400 LYS C O doub N N 401 LYS C OXT sing N N 402 LYS CB CG sing N N 403 LYS CB HB2 sing N N 404 LYS CB HB3 sing N N 405 LYS CG CD sing N N 406 LYS CG HG2 sing N N 407 LYS CG HG3 sing N N 408 LYS CD CE sing N N 409 LYS CD HD2 sing N N 410 LYS CD HD3 sing N N 411 LYS CE NZ sing N N 412 LYS CE HE2 sing N N 413 LYS CE HE3 sing N N 414 LYS NZ HZ1 sing N N 415 LYS NZ HZ2 sing N N 416 LYS NZ HZ3 sing N N 417 LYS OXT HXT sing N N 418 MET N CA sing N N 419 MET N H sing N N 420 MET N H2 sing N N 421 MET CA C sing N N 422 MET CA CB sing N N 423 MET CA HA sing N N 424 MET C O doub N N 425 MET C OXT sing N N 426 MET CB CG sing N N 427 MET CB HB2 sing N N 428 MET CB HB3 sing N N 429 MET CG SD sing N N 430 MET CG HG2 sing N N 431 MET CG HG3 sing N N 432 MET SD CE sing N N 433 MET CE HE1 sing N N 434 MET CE HE2 sing N N 435 MET CE HE3 sing N N 436 MET OXT HXT sing N N 437 PHE N CA sing N N 438 PHE N H sing N N 439 PHE N H2 sing N N 440 PHE CA C sing N N 441 PHE CA CB sing N N 442 PHE CA HA sing N N 443 PHE C O doub N N 444 PHE C OXT sing N N 445 PHE CB CG sing N N 446 PHE CB HB2 sing N N 447 PHE CB HB3 sing N N 448 PHE CG CD1 doub Y N 449 PHE CG CD2 sing Y N 450 PHE CD1 CE1 sing Y N 451 PHE CD1 HD1 sing N N 452 PHE CD2 CE2 doub Y N 453 PHE CD2 HD2 sing N N 454 PHE CE1 CZ doub Y N 455 PHE CE1 HE1 sing N N 456 PHE CE2 CZ sing Y N 457 PHE CE2 HE2 sing N N 458 PHE CZ HZ sing N N 459 PHE OXT HXT sing N N 460 PRO N CA sing N N 461 PRO N CD sing N N 462 PRO N H sing N N 463 PRO CA C sing N N 464 PRO CA CB sing N N 465 PRO CA HA sing N N 466 PRO C O doub N N 467 PRO C OXT sing N N 468 PRO CB CG sing N N 469 PRO CB HB2 sing N N 470 PRO CB HB3 sing N N 471 PRO CG CD sing N N 472 PRO CG HG2 sing N N 473 PRO CG HG3 sing N N 474 PRO CD HD2 sing N N 475 PRO CD HD3 sing N N 476 PRO OXT HXT sing N N 477 SER N CA sing N N 478 SER N H sing N N 479 SER N H2 sing N N 480 SER CA C sing N N 481 SER CA CB sing N N 482 SER CA HA sing N N 483 SER C O doub N N 484 SER C OXT sing N N 485 SER CB OG sing N N 486 SER CB HB2 sing N N 487 SER CB HB3 sing N N 488 SER OG HG sing N N 489 SER OXT HXT sing N N 490 SO4 S O1 doub N N 491 SO4 S O2 doub N N 492 SO4 S O3 sing N N 493 SO4 S O4 sing N N 494 THR N CA sing N N 495 THR N H sing N N 496 THR N H2 sing N N 497 THR CA C sing N N 498 THR CA CB sing N N 499 THR CA HA sing N N 500 THR C O doub N N 501 THR C OXT sing N N 502 THR CB OG1 sing N N 503 THR CB CG2 sing N N 504 THR CB HB sing N N 505 THR OG1 HG1 sing N N 506 THR CG2 HG21 sing N N 507 THR CG2 HG22 sing N N 508 THR CG2 HG23 sing N N 509 THR OXT HXT sing N N 510 TRP N CA sing N N 511 TRP N H sing N N 512 TRP N H2 sing N N 513 TRP CA C sing N N 514 TRP CA CB sing N N 515 TRP CA HA sing N N 516 TRP C O doub N N 517 TRP C OXT sing N N 518 TRP CB CG sing N N 519 TRP CB HB2 sing N N 520 TRP CB HB3 sing N N 521 TRP CG CD1 doub Y N 522 TRP CG CD2 sing Y N 523 TRP CD1 NE1 sing Y N 524 TRP CD1 HD1 sing N N 525 TRP CD2 CE2 doub Y N 526 TRP CD2 CE3 sing Y N 527 TRP NE1 CE2 sing Y N 528 TRP NE1 HE1 sing N N 529 TRP CE2 CZ2 sing Y N 530 TRP CE3 CZ3 doub Y N 531 TRP CE3 HE3 sing N N 532 TRP CZ2 CH2 doub Y N 533 TRP CZ2 HZ2 sing N N 534 TRP CZ3 CH2 sing Y N 535 TRP CZ3 HZ3 sing N N 536 TRP CH2 HH2 sing N N 537 TRP OXT HXT sing N N 538 TYR N CA sing N N 539 TYR N H sing N N 540 TYR N H2 sing N N 541 TYR CA C sing N N 542 TYR CA CB sing N N 543 TYR CA HA sing N N 544 TYR C O doub N N 545 TYR C OXT sing N N 546 TYR CB CG sing N N 547 TYR CB HB2 sing N N 548 TYR CB HB3 sing N N 549 TYR CG CD1 doub Y N 550 TYR CG CD2 sing Y N 551 TYR CD1 CE1 sing Y N 552 TYR CD1 HD1 sing N N 553 TYR CD2 CE2 doub Y N 554 TYR CD2 HD2 sing N N 555 TYR CE1 CZ doub Y N 556 TYR CE1 HE1 sing N N 557 TYR CE2 CZ sing Y N 558 TYR CE2 HE2 sing N N 559 TYR CZ OH sing N N 560 TYR OH HH sing N N 561 TYR OXT HXT sing N N 562 VAL N CA sing N N 563 VAL N H sing N N 564 VAL N H2 sing N N 565 VAL CA C sing N N 566 VAL CA CB sing N N 567 VAL CA HA sing N N 568 VAL C O doub N N 569 VAL C OXT sing N N 570 VAL CB CG1 sing N N 571 VAL CB CG2 sing N N 572 VAL CB HB sing N N 573 VAL CG1 HG11 sing N N 574 VAL CG1 HG12 sing N N 575 VAL CG1 HG13 sing N N 576 VAL CG2 HG21 sing N N 577 VAL CG2 HG22 sing N N 578 VAL CG2 HG23 sing N N 579 VAL OXT HXT sing N N 580 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4DSI 'double helix' 4DSI 'a-form double helix' 4DSI 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 4 1_555 C DG 9 1_555 0.707 -0.385 -0.318 -1.584 -1.941 -1.124 1 B_DC4:DG9_C B 4 ? C 9 ? 19 1 1 B DG 5 1_555 C DC 8 1_555 0.026 -0.471 -0.192 -3.590 -10.375 -1.470 2 B_DG5:DC8_C B 5 ? C 8 ? 19 1 1 B DA 6 1_555 C DT 7 1_555 0.131 -0.384 0.070 0.609 -14.635 1.110 3 B_DA6:DT7_C B 6 ? C 7 ? 20 1 1 B DG 7 1_555 C DC 6 1_555 -0.216 -0.149 -0.059 -4.051 -13.236 -0.884 4 B_DG7:DC6_C B 7 ? C 6 ? 19 1 1 B DT 8 1_555 C DA 5 1_555 -0.120 -0.097 -0.192 0.064 -5.385 -1.818 5 B_DT8:DA5_C B 8 ? C 5 ? 20 1 1 B DC 9 1_555 C DG 4 1_555 0.247 -0.149 -0.522 5.452 7.681 -0.993 6 B_DC9:DG4_C B 9 ? C 4 ? 19 1 1 B DA 10 1_555 C DT 3 1_555 0.136 -0.190 0.183 1.317 -9.757 -0.229 7 B_DA10:DT3_C B 10 ? C 3 ? 20 1 1 B DG 11 1_555 C DC 2 1_555 -0.158 -0.065 0.038 8.251 -1.285 2.737 8 B_DG11:DC2_C B 11 ? C 2 ? 19 1 1 B DG 12 1_555 C DC 1 1_555 -0.423 -0.188 -0.501 -4.585 -16.941 5.083 9 B_DG12:DC1_C B 12 ? C 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 4 1_555 C DG 9 1_555 B DG 5 1_555 C DC 8 1_555 -0.932 1.208 3.460 -4.713 5.190 36.143 1.136 0.771 3.681 8.269 7.510 36.795 1 BB_DC4DG5:DC8DG9_CC B 4 ? C 9 ? B 5 ? C 8 ? 1 B DG 5 1_555 C DC 8 1_555 B DA 6 1_555 C DT 7 1_555 -0.022 -0.090 3.168 -3.566 2.738 34.885 -0.544 -0.479 3.139 4.544 5.917 35.165 2 BB_DG5DA6:DT7DC8_CC B 5 ? C 8 ? B 6 ? C 7 ? 1 B DA 6 1_555 C DT 7 1_555 B DG 7 1_555 C DC 6 1_555 -0.032 -0.371 3.397 0.291 8.658 29.769 -2.405 0.118 3.166 16.420 -0.552 30.976 3 BB_DA6DG7:DC6DT7_CC B 6 ? C 7 ? B 7 ? C 6 ? 1 B DG 7 1_555 C DC 6 1_555 B DT 8 1_555 C DA 5 1_555 0.296 -0.422 3.193 2.633 0.654 31.064 -0.906 -0.060 3.198 1.218 -4.904 31.180 4 BB_DG7DT8:DA5DC6_CC B 7 ? C 6 ? B 8 ? C 5 ? 1 B DT 8 1_555 C DA 5 1_555 B DC 9 1_555 C DG 4 1_555 0.992 -0.143 3.347 3.982 8.016 32.229 -1.624 -1.041 3.313 14.103 -7.005 33.417 5 BB_DT8DC9:DG4DA5_CC B 8 ? C 5 ? B 9 ? C 4 ? 1 B DC 9 1_555 C DG 4 1_555 B DA 10 1_555 C DT 3 1_555 -0.323 -0.419 3.515 -11.454 10.426 40.619 -1.660 -0.764 3.288 14.402 15.822 43.355 6 BB_DC9DA10:DT3DG4_CC B 9 ? C 4 ? B 10 ? C 3 ? 1 B DA 10 1_555 C DT 3 1_555 B DG 11 1_555 C DC 2 1_555 -0.329 -2.269 3.252 -2.168 5.163 19.262 -8.696 0.030 2.581 15.024 6.310 20.052 7 BB_DA10DG11:DC2DT3_CC B 10 ? C 3 ? B 11 ? C 2 ? 1 B DG 11 1_555 C DC 2 1_555 B DG 12 1_555 C DC 1 1_555 0.428 -1.777 3.743 5.108 9.513 32.165 -4.704 0.154 3.135 16.596 -8.911 33.883 8 BB_DG11DG12:DC1DC2_CC B 11 ? C 2 ? B 12 ? C 1 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3HT3 _pdbx_initial_refinement_model.details 'PDB 3HT3' # _atom_sites.entry_id 4DSI _atom_sites.fract_transf_matrix[1][1] 0.011290 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010708 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009440 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P S # loop_