data_4DSO # _entry.id 4DSO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4DSO pdb_00004dso 10.2210/pdb4dso/pdb RCSB RCSB070732 ? ? WWPDB D_1000070732 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-04-04 2 'Structure model' 1 1 2012-04-18 3 'Structure model' 1 2 2012-06-06 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 4 'Structure model' '_struct_ref_seq_dif.details' 29 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 30 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 31 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4DSO _pdbx_database_status.recvd_initial_deposition_date 2012-02-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4DSN . unspecified PDB 4DST . unspecified PDB 4DSU . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Oh, A.' 1 'Maurer, T.' 2 'Garrenton, L.S.' 3 'Pitts, K.' 4 'Anderson, D.J.' 5 'Skelton, N.J.' 6 'Fauber, B.P.' 7 'Pan, B.' 8 'Malek, S.' 9 'Stokoe, D.' 10 'Ludlam, M.' 11 'Bowman, K.K.' 12 'Wu, J.' 13 'Giannetti, A.M.' 14 'Starovasnik, M.A.' 15 'Mellman, I.' 16 'Jackson, P.K.' 17 'Ruldolph, J.' 18 'Fang, G.' 19 'Wang, W.' 20 # _citation.id primary _citation.title 'Small-molecule ligands bind to a distinct pocket in Ras and inhibit SOS-mediated nucleotide exchange activity.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 109 _citation.page_first 5299 _citation.page_last 5304 _citation.year 2012 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22431598 _citation.pdbx_database_id_DOI 10.1073/pnas.1116510109 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Maurer, T.' 1 ? primary 'Garrenton, L.S.' 2 ? primary 'Oh, A.' 3 ? primary 'Pitts, K.' 4 ? primary 'Anderson, D.J.' 5 ? primary 'Skelton, N.J.' 6 ? primary 'Fauber, B.P.' 7 ? primary 'Pan, B.' 8 ? primary 'Malek, S.' 9 ? primary 'Stokoe, D.' 10 ? primary 'Ludlam, M.J.' 11 ? primary 'Bowman, K.K.' 12 ? primary 'Wu, J.' 13 ? primary 'Giannetti, A.M.' 14 ? primary 'Starovasnik, M.A.' 15 ? primary 'Mellman, I.' 16 ? primary 'Jackson, P.K.' 17 ? primary 'Rudolph, J.' 18 ? primary 'Wang, W.' 19 ? primary 'Fang, G.' 20 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'GTPase KRas, isoform 2B' 21530.574 1 3.6.-.- G12D ? ? 2 non-polymer syn "5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE" 539.246 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn BENZAMIDINE 120.152 1 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 6 water nat water 18.015 149 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'KRas 4B, K-Ras 2, Ki-Ras, c-K-ras, c-Ki-ras, GTPase KRas, N-terminally processed' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSTEYKLVVVGADGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFL CVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTL VREIRKHKEKMSKDGKKKKKKSKTKCVIM ; _entity_poly.pdbx_seq_one_letter_code_can ;GSTEYKLVVVGADGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFL CVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTL VREIRKHKEKMSKDGKKKKKKSKTKCVIM ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE" GSP 3 'MAGNESIUM ION' MG 4 BENZAMIDINE BEN 5 GLYCEROL GOL 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 THR n 1 4 GLU n 1 5 TYR n 1 6 LYS n 1 7 LEU n 1 8 VAL n 1 9 VAL n 1 10 VAL n 1 11 GLY n 1 12 ALA n 1 13 ASP n 1 14 GLY n 1 15 VAL n 1 16 GLY n 1 17 LYS n 1 18 SER n 1 19 ALA n 1 20 LEU n 1 21 THR n 1 22 ILE n 1 23 GLN n 1 24 LEU n 1 25 ILE n 1 26 GLN n 1 27 ASN n 1 28 HIS n 1 29 PHE n 1 30 VAL n 1 31 ASP n 1 32 GLU n 1 33 TYR n 1 34 ASP n 1 35 PRO n 1 36 THR n 1 37 ILE n 1 38 GLU n 1 39 ASP n 1 40 SER n 1 41 TYR n 1 42 ARG n 1 43 LYS n 1 44 GLN n 1 45 VAL n 1 46 VAL n 1 47 ILE n 1 48 ASP n 1 49 GLY n 1 50 GLU n 1 51 THR n 1 52 CYS n 1 53 LEU n 1 54 LEU n 1 55 ASP n 1 56 ILE n 1 57 LEU n 1 58 ASP n 1 59 THR n 1 60 ALA n 1 61 GLY n 1 62 GLN n 1 63 GLU n 1 64 GLU n 1 65 TYR n 1 66 SER n 1 67 ALA n 1 68 MET n 1 69 ARG n 1 70 ASP n 1 71 GLN n 1 72 TYR n 1 73 MET n 1 74 ARG n 1 75 THR n 1 76 GLY n 1 77 GLU n 1 78 GLY n 1 79 PHE n 1 80 LEU n 1 81 CYS n 1 82 VAL n 1 83 PHE n 1 84 ALA n 1 85 ILE n 1 86 ASN n 1 87 ASN n 1 88 THR n 1 89 LYS n 1 90 SER n 1 91 PHE n 1 92 GLU n 1 93 ASP n 1 94 ILE n 1 95 HIS n 1 96 HIS n 1 97 TYR n 1 98 ARG n 1 99 GLU n 1 100 GLN n 1 101 ILE n 1 102 LYS n 1 103 ARG n 1 104 VAL n 1 105 LYS n 1 106 ASP n 1 107 SER n 1 108 GLU n 1 109 ASP n 1 110 VAL n 1 111 PRO n 1 112 MET n 1 113 VAL n 1 114 LEU n 1 115 VAL n 1 116 GLY n 1 117 ASN n 1 118 LYS n 1 119 CYS n 1 120 ASP n 1 121 LEU n 1 122 PRO n 1 123 SER n 1 124 ARG n 1 125 THR n 1 126 VAL n 1 127 ASP n 1 128 THR n 1 129 LYS n 1 130 GLN n 1 131 ALA n 1 132 GLN n 1 133 ASP n 1 134 LEU n 1 135 ALA n 1 136 ARG n 1 137 SER n 1 138 TYR n 1 139 GLY n 1 140 ILE n 1 141 PRO n 1 142 PHE n 1 143 ILE n 1 144 GLU n 1 145 THR n 1 146 SER n 1 147 ALA n 1 148 LYS n 1 149 THR n 1 150 ARG n 1 151 GLN n 1 152 GLY n 1 153 VAL n 1 154 ASP n 1 155 ASP n 1 156 ALA n 1 157 PHE n 1 158 TYR n 1 159 THR n 1 160 LEU n 1 161 VAL n 1 162 ARG n 1 163 GLU n 1 164 ILE n 1 165 ARG n 1 166 LYS n 1 167 HIS n 1 168 LYS n 1 169 GLU n 1 170 LYS n 1 171 MET n 1 172 SER n 1 173 LYS n 1 174 ASP n 1 175 GLY n 1 176 LYS n 1 177 LYS n 1 178 LYS n 1 179 LYS n 1 180 LYS n 1 181 LYS n 1 182 SER n 1 183 LYS n 1 184 THR n 1 185 LYS n 1 186 CYS n 1 187 VAL n 1 188 ILE n 1 189 MET n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'KRAS, KRAS2, RASK2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BEN non-polymer . BENZAMIDINE ? 'C7 H8 N2' 120.152 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 GSP non-polymer . "5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE" ? 'C10 H16 N5 O13 P3 S' 539.246 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 SER 2 1 1 SER SER A . n A 1 3 THR 3 2 2 THR THR A . n A 1 4 GLU 4 3 3 GLU GLU A . n A 1 5 TYR 5 4 4 TYR TYR A . n A 1 6 LYS 6 5 5 LYS LYS A . n A 1 7 LEU 7 6 6 LEU LEU A . n A 1 8 VAL 8 7 7 VAL VAL A . n A 1 9 VAL 9 8 8 VAL VAL A . n A 1 10 VAL 10 9 9 VAL VAL A . n A 1 11 GLY 11 10 10 GLY GLY A . n A 1 12 ALA 12 11 11 ALA ALA A . n A 1 13 ASP 13 12 12 ASP ASP A . n A 1 14 GLY 14 13 13 GLY GLY A . n A 1 15 VAL 15 14 14 VAL VAL A . n A 1 16 GLY 16 15 15 GLY GLY A . n A 1 17 LYS 17 16 16 LYS LYS A . n A 1 18 SER 18 17 17 SER SER A . n A 1 19 ALA 19 18 18 ALA ALA A . n A 1 20 LEU 20 19 19 LEU LEU A . n A 1 21 THR 21 20 20 THR THR A . n A 1 22 ILE 22 21 21 ILE ILE A . n A 1 23 GLN 23 22 22 GLN GLN A . n A 1 24 LEU 24 23 23 LEU LEU A . n A 1 25 ILE 25 24 24 ILE ILE A . n A 1 26 GLN 26 25 25 GLN GLN A . n A 1 27 ASN 27 26 26 ASN ASN A . n A 1 28 HIS 28 27 27 HIS HIS A . n A 1 29 PHE 29 28 28 PHE PHE A . n A 1 30 VAL 30 29 29 VAL VAL A . n A 1 31 ASP 31 30 30 ASP ASP A . n A 1 32 GLU 32 31 31 GLU GLU A . n A 1 33 TYR 33 32 32 TYR TYR A . n A 1 34 ASP 34 33 33 ASP ASP A . n A 1 35 PRO 35 34 34 PRO PRO A . n A 1 36 THR 36 35 35 THR THR A . n A 1 37 ILE 37 36 36 ILE ILE A . n A 1 38 GLU 38 37 37 GLU GLU A . n A 1 39 ASP 39 38 38 ASP ASP A . n A 1 40 SER 40 39 39 SER SER A . n A 1 41 TYR 41 40 40 TYR TYR A . n A 1 42 ARG 42 41 41 ARG ARG A . n A 1 43 LYS 43 42 42 LYS LYS A . n A 1 44 GLN 44 43 43 GLN GLN A . n A 1 45 VAL 45 44 44 VAL VAL A . n A 1 46 VAL 46 45 45 VAL VAL A . n A 1 47 ILE 47 46 46 ILE ILE A . n A 1 48 ASP 48 47 47 ASP ASP A . n A 1 49 GLY 49 48 48 GLY GLY A . n A 1 50 GLU 50 49 49 GLU GLU A . n A 1 51 THR 51 50 50 THR THR A . n A 1 52 CYS 52 51 51 CYS CYS A . n A 1 53 LEU 53 52 52 LEU LEU A . n A 1 54 LEU 54 53 53 LEU LEU A . n A 1 55 ASP 55 54 54 ASP ASP A . n A 1 56 ILE 56 55 55 ILE ILE A . n A 1 57 LEU 57 56 56 LEU LEU A . n A 1 58 ASP 58 57 57 ASP ASP A . n A 1 59 THR 59 58 58 THR THR A . n A 1 60 ALA 60 59 59 ALA ALA A . n A 1 61 GLY 61 60 60 GLY GLY A . n A 1 62 GLN 62 61 61 GLN GLN A . n A 1 63 GLU 63 62 62 GLU GLU A . n A 1 64 GLU 64 63 63 GLU GLU A . n A 1 65 TYR 65 64 64 TYR TYR A . n A 1 66 SER 66 65 65 SER SER A . n A 1 67 ALA 67 66 66 ALA ALA A . n A 1 68 MET 68 67 67 MET MET A . n A 1 69 ARG 69 68 68 ARG ARG A . n A 1 70 ASP 70 69 69 ASP ASP A . n A 1 71 GLN 71 70 70 GLN GLN A . n A 1 72 TYR 72 71 71 TYR TYR A . n A 1 73 MET 73 72 72 MET MET A . n A 1 74 ARG 74 73 73 ARG ARG A . n A 1 75 THR 75 74 74 THR THR A . n A 1 76 GLY 76 75 75 GLY GLY A . n A 1 77 GLU 77 76 76 GLU GLU A . n A 1 78 GLY 78 77 77 GLY GLY A . n A 1 79 PHE 79 78 78 PHE PHE A . n A 1 80 LEU 80 79 79 LEU LEU A . n A 1 81 CYS 81 80 80 CYS CYS A . n A 1 82 VAL 82 81 81 VAL VAL A . n A 1 83 PHE 83 82 82 PHE PHE A . n A 1 84 ALA 84 83 83 ALA ALA A . n A 1 85 ILE 85 84 84 ILE ILE A . n A 1 86 ASN 86 85 85 ASN ASN A . n A 1 87 ASN 87 86 86 ASN ASN A . n A 1 88 THR 88 87 87 THR THR A . n A 1 89 LYS 89 88 88 LYS LYS A . n A 1 90 SER 90 89 89 SER SER A . n A 1 91 PHE 91 90 90 PHE PHE A . n A 1 92 GLU 92 91 91 GLU GLU A . n A 1 93 ASP 93 92 92 ASP ASP A . n A 1 94 ILE 94 93 93 ILE ILE A . n A 1 95 HIS 95 94 94 HIS HIS A . n A 1 96 HIS 96 95 95 HIS HIS A . n A 1 97 TYR 97 96 96 TYR TYR A . n A 1 98 ARG 98 97 97 ARG ARG A . n A 1 99 GLU 99 98 98 GLU GLU A . n A 1 100 GLN 100 99 99 GLN GLN A . n A 1 101 ILE 101 100 100 ILE ILE A . n A 1 102 LYS 102 101 101 LYS LYS A . n A 1 103 ARG 103 102 102 ARG ARG A . n A 1 104 VAL 104 103 103 VAL VAL A . n A 1 105 LYS 105 104 104 LYS LYS A . n A 1 106 ASP 106 105 105 ASP ASP A . n A 1 107 SER 107 106 106 SER SER A . n A 1 108 GLU 108 107 107 GLU GLU A . n A 1 109 ASP 109 108 108 ASP ASP A . n A 1 110 VAL 110 109 109 VAL VAL A . n A 1 111 PRO 111 110 110 PRO PRO A . n A 1 112 MET 112 111 111 MET MET A . n A 1 113 VAL 113 112 112 VAL VAL A . n A 1 114 LEU 114 113 113 LEU LEU A . n A 1 115 VAL 115 114 114 VAL VAL A . n A 1 116 GLY 116 115 115 GLY GLY A . n A 1 117 ASN 117 116 116 ASN ASN A . n A 1 118 LYS 118 117 117 LYS LYS A . n A 1 119 CYS 119 118 118 CYS CYS A . n A 1 120 ASP 120 119 119 ASP ASP A . n A 1 121 LEU 121 120 120 LEU LEU A . n A 1 122 PRO 122 121 121 PRO PRO A . n A 1 123 SER 123 122 122 SER SER A . n A 1 124 ARG 124 123 123 ARG ARG A . n A 1 125 THR 125 124 124 THR THR A . n A 1 126 VAL 126 125 125 VAL VAL A . n A 1 127 ASP 127 126 126 ASP ASP A . n A 1 128 THR 128 127 127 THR THR A . n A 1 129 LYS 129 128 128 LYS LYS A . n A 1 130 GLN 130 129 129 GLN GLN A . n A 1 131 ALA 131 130 130 ALA ALA A . n A 1 132 GLN 132 131 131 GLN GLN A . n A 1 133 ASP 133 132 132 ASP ASP A . n A 1 134 LEU 134 133 133 LEU LEU A . n A 1 135 ALA 135 134 134 ALA ALA A . n A 1 136 ARG 136 135 135 ARG ARG A . n A 1 137 SER 137 136 136 SER SER A . n A 1 138 TYR 138 137 137 TYR TYR A . n A 1 139 GLY 139 138 138 GLY GLY A . n A 1 140 ILE 140 139 139 ILE ILE A . n A 1 141 PRO 141 140 140 PRO PRO A . n A 1 142 PHE 142 141 141 PHE PHE A . n A 1 143 ILE 143 142 142 ILE ILE A . n A 1 144 GLU 144 143 143 GLU GLU A . n A 1 145 THR 145 144 144 THR THR A . n A 1 146 SER 146 145 145 SER SER A . n A 1 147 ALA 147 146 146 ALA ALA A . n A 1 148 LYS 148 147 147 LYS LYS A . n A 1 149 THR 149 148 148 THR THR A . n A 1 150 ARG 150 149 149 ARG ARG A . n A 1 151 GLN 151 150 150 GLN GLN A . n A 1 152 GLY 152 151 151 GLY GLY A . n A 1 153 VAL 153 152 152 VAL VAL A . n A 1 154 ASP 154 153 153 ASP ASP A . n A 1 155 ASP 155 154 154 ASP ASP A . n A 1 156 ALA 156 155 155 ALA ALA A . n A 1 157 PHE 157 156 156 PHE PHE A . n A 1 158 TYR 158 157 157 TYR TYR A . n A 1 159 THR 159 158 158 THR THR A . n A 1 160 LEU 160 159 159 LEU LEU A . n A 1 161 VAL 161 160 160 VAL VAL A . n A 1 162 ARG 162 161 161 ARG ARG A . n A 1 163 GLU 163 162 162 GLU GLU A . n A 1 164 ILE 164 163 163 ILE ILE A . n A 1 165 ARG 165 164 164 ARG ARG A . n A 1 166 LYS 166 165 165 LYS LYS A . n A 1 167 HIS 167 166 166 HIS HIS A . n A 1 168 LYS 168 167 167 LYS LYS A . n A 1 169 GLU 169 168 168 GLU GLU A . n A 1 170 LYS 170 169 169 LYS LYS A . n A 1 171 MET 171 170 170 MET MET A . n A 1 172 SER 172 171 171 SER SER A . n A 1 173 LYS 173 172 172 LYS LYS A . n A 1 174 ASP 174 173 173 ASP ASP A . n A 1 175 GLY 175 174 174 GLY GLY A . n A 1 176 LYS 176 175 175 LYS LYS A . n A 1 177 LYS 177 176 176 LYS LYS A . n A 1 178 LYS 178 177 177 LYS LYS A . n A 1 179 LYS 179 178 178 LYS LYS A . n A 1 180 LYS 180 179 179 LYS LYS A . n A 1 181 LYS 181 180 180 LYS LYS A . n A 1 182 SER 182 181 ? ? ? A . n A 1 183 LYS 183 182 ? ? ? A . n A 1 184 THR 184 183 ? ? ? A . n A 1 185 LYS 185 184 ? ? ? A . n A 1 186 CYS 186 185 ? ? ? A . n A 1 187 VAL 187 186 ? ? ? A . n A 1 188 ILE 188 187 ? ? ? A . n A 1 189 MET 189 188 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GSP 1 201 1 GSP GSP A . C 3 MG 1 202 2 MG MG A . D 4 BEN 1 203 3 BEN BEN A . E 5 GOL 1 204 4 GOL GOL A . F 6 HOH 1 301 1 HOH HOH A . F 6 HOH 2 302 2 HOH HOH A . F 6 HOH 3 303 3 HOH HOH A . F 6 HOH 4 304 4 HOH HOH A . F 6 HOH 5 305 5 HOH HOH A . F 6 HOH 6 306 6 HOH HOH A . F 6 HOH 7 307 7 HOH HOH A . F 6 HOH 8 308 8 HOH HOH A . F 6 HOH 9 309 9 HOH HOH A . F 6 HOH 10 310 10 HOH HOH A . F 6 HOH 11 311 11 HOH HOH A . F 6 HOH 12 312 12 HOH HOH A . F 6 HOH 13 313 13 HOH HOH A . F 6 HOH 14 314 14 HOH HOH A . F 6 HOH 15 315 15 HOH HOH A . F 6 HOH 16 316 16 HOH HOH A . F 6 HOH 17 317 17 HOH HOH A . F 6 HOH 18 318 18 HOH HOH A . F 6 HOH 19 319 19 HOH HOH A . F 6 HOH 20 320 20 HOH HOH A . F 6 HOH 21 321 21 HOH HOH A . F 6 HOH 22 322 22 HOH HOH A . F 6 HOH 23 323 23 HOH HOH A . F 6 HOH 24 324 24 HOH HOH A . F 6 HOH 25 325 25 HOH HOH A . F 6 HOH 26 326 26 HOH HOH A . F 6 HOH 27 327 27 HOH HOH A . F 6 HOH 28 328 28 HOH HOH A . F 6 HOH 29 329 29 HOH HOH A . F 6 HOH 30 330 30 HOH HOH A . F 6 HOH 31 331 31 HOH HOH A . F 6 HOH 32 332 32 HOH HOH A . F 6 HOH 33 333 33 HOH HOH A . F 6 HOH 34 334 34 HOH HOH A . F 6 HOH 35 335 35 HOH HOH A . F 6 HOH 36 336 36 HOH HOH A . F 6 HOH 37 337 37 HOH HOH A . F 6 HOH 38 338 38 HOH HOH A . F 6 HOH 39 339 39 HOH HOH A . F 6 HOH 40 340 40 HOH HOH A . F 6 HOH 41 341 41 HOH HOH A . F 6 HOH 42 342 42 HOH HOH A . F 6 HOH 43 343 43 HOH HOH A . F 6 HOH 44 344 44 HOH HOH A . F 6 HOH 45 345 45 HOH HOH A . F 6 HOH 46 346 46 HOH HOH A . F 6 HOH 47 347 47 HOH HOH A . F 6 HOH 48 348 48 HOH HOH A . F 6 HOH 49 349 49 HOH HOH A . F 6 HOH 50 350 50 HOH HOH A . F 6 HOH 51 351 51 HOH HOH A . F 6 HOH 52 352 52 HOH HOH A . F 6 HOH 53 353 53 HOH HOH A . F 6 HOH 54 354 54 HOH HOH A . F 6 HOH 55 355 55 HOH HOH A . F 6 HOH 56 356 56 HOH HOH A . F 6 HOH 57 357 57 HOH HOH A . F 6 HOH 58 358 58 HOH HOH A . F 6 HOH 59 359 59 HOH HOH A . F 6 HOH 60 360 60 HOH HOH A . F 6 HOH 61 361 61 HOH HOH A . F 6 HOH 62 362 62 HOH HOH A . F 6 HOH 63 363 63 HOH HOH A . F 6 HOH 64 364 64 HOH HOH A . F 6 HOH 65 365 65 HOH HOH A . F 6 HOH 66 366 66 HOH HOH A . F 6 HOH 67 367 67 HOH HOH A . F 6 HOH 68 368 68 HOH HOH A . F 6 HOH 69 369 69 HOH HOH A . F 6 HOH 70 370 70 HOH HOH A . F 6 HOH 71 371 71 HOH HOH A . F 6 HOH 72 372 72 HOH HOH A . F 6 HOH 73 373 73 HOH HOH A . F 6 HOH 74 374 74 HOH HOH A . F 6 HOH 75 375 75 HOH HOH A . F 6 HOH 76 376 76 HOH HOH A . F 6 HOH 77 377 77 HOH HOH A . F 6 HOH 78 378 78 HOH HOH A . F 6 HOH 79 379 79 HOH HOH A . F 6 HOH 80 380 80 HOH HOH A . F 6 HOH 81 381 81 HOH HOH A . F 6 HOH 82 382 82 HOH HOH A . F 6 HOH 83 383 83 HOH HOH A . F 6 HOH 84 384 84 HOH HOH A . F 6 HOH 85 385 85 HOH HOH A . F 6 HOH 86 386 86 HOH HOH A . F 6 HOH 87 387 87 HOH HOH A . F 6 HOH 88 388 88 HOH HOH A . F 6 HOH 89 389 89 HOH HOH A . F 6 HOH 90 390 90 HOH HOH A . F 6 HOH 91 391 91 HOH HOH A . F 6 HOH 92 392 92 HOH HOH A . F 6 HOH 93 393 93 HOH HOH A . F 6 HOH 94 394 94 HOH HOH A . F 6 HOH 95 395 95 HOH HOH A . F 6 HOH 96 396 96 HOH HOH A . F 6 HOH 97 397 97 HOH HOH A . F 6 HOH 98 398 98 HOH HOH A . F 6 HOH 99 399 99 HOH HOH A . F 6 HOH 100 400 100 HOH HOH A . F 6 HOH 101 401 101 HOH HOH A . F 6 HOH 102 402 102 HOH HOH A . F 6 HOH 103 403 103 HOH HOH A . F 6 HOH 104 404 104 HOH HOH A . F 6 HOH 105 405 105 HOH HOH A . F 6 HOH 106 406 106 HOH HOH A . F 6 HOH 107 407 107 HOH HOH A . F 6 HOH 108 408 108 HOH HOH A . F 6 HOH 109 409 109 HOH HOH A . F 6 HOH 110 410 110 HOH HOH A . F 6 HOH 111 411 111 HOH HOH A . F 6 HOH 112 412 112 HOH HOH A . F 6 HOH 113 413 113 HOH HOH A . F 6 HOH 114 414 114 HOH HOH A . F 6 HOH 115 415 115 HOH HOH A . F 6 HOH 116 416 116 HOH HOH A . F 6 HOH 117 417 117 HOH HOH A . F 6 HOH 118 418 118 HOH HOH A . F 6 HOH 119 419 119 HOH HOH A . F 6 HOH 120 420 120 HOH HOH A . F 6 HOH 121 421 121 HOH HOH A . F 6 HOH 122 422 122 HOH HOH A . F 6 HOH 123 423 123 HOH HOH A . F 6 HOH 124 424 124 HOH HOH A . F 6 HOH 125 425 125 HOH HOH A . F 6 HOH 126 426 126 HOH HOH A . F 6 HOH 127 427 127 HOH HOH A . F 6 HOH 128 428 128 HOH HOH A . F 6 HOH 129 429 129 HOH HOH A . F 6 HOH 130 430 130 HOH HOH A . F 6 HOH 131 431 131 HOH HOH A . F 6 HOH 132 432 132 HOH HOH A . F 6 HOH 133 433 133 HOH HOH A . F 6 HOH 134 434 134 HOH HOH A . F 6 HOH 135 435 135 HOH HOH A . F 6 HOH 136 436 136 HOH HOH A . F 6 HOH 137 437 137 HOH HOH A . F 6 HOH 138 438 138 HOH HOH A . F 6 HOH 139 439 139 HOH HOH A . F 6 HOH 140 440 140 HOH HOH A . F 6 HOH 141 441 141 HOH HOH A . F 6 HOH 142 442 142 HOH HOH A . F 6 HOH 143 443 143 HOH HOH A . F 6 HOH 144 444 144 HOH HOH A . F 6 HOH 145 445 145 HOH HOH A . F 6 HOH 146 446 146 HOH HOH A . F 6 HOH 147 447 147 HOH HOH A . F 6 HOH 148 448 148 HOH HOH A . F 6 HOH 149 449 149 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 175 ? CG ? A LYS 176 CG 2 1 Y 1 A LYS 175 ? CD ? A LYS 176 CD 3 1 Y 1 A LYS 175 ? CE ? A LYS 176 CE 4 1 Y 1 A LYS 175 ? NZ ? A LYS 176 NZ 5 1 Y 1 A LYS 176 ? CG ? A LYS 177 CG 6 1 Y 1 A LYS 176 ? CD ? A LYS 177 CD 7 1 Y 1 A LYS 176 ? CE ? A LYS 177 CE 8 1 Y 1 A LYS 176 ? NZ ? A LYS 177 NZ 9 1 Y 1 A LYS 177 ? CG ? A LYS 178 CG 10 1 Y 1 A LYS 177 ? CD ? A LYS 178 CD 11 1 Y 1 A LYS 177 ? CE ? A LYS 178 CE 12 1 Y 1 A LYS 177 ? NZ ? A LYS 178 NZ 13 1 Y 1 A LYS 178 ? CG ? A LYS 179 CG 14 1 Y 1 A LYS 178 ? CD ? A LYS 179 CD 15 1 Y 1 A LYS 178 ? CE ? A LYS 179 CE 16 1 Y 1 A LYS 178 ? NZ ? A LYS 179 NZ 17 1 Y 1 A LYS 179 ? CG ? A LYS 180 CG 18 1 Y 1 A LYS 179 ? CD ? A LYS 180 CD 19 1 Y 1 A LYS 179 ? CE ? A LYS 180 CE 20 1 Y 1 A LYS 179 ? NZ ? A LYS 180 NZ 21 1 Y 1 A LYS 180 ? CG ? A LYS 181 CG 22 1 Y 1 A LYS 180 ? CD ? A LYS 181 CD 23 1 Y 1 A LYS 180 ? CE ? A LYS 181 CE 24 1 Y 1 A LYS 180 ? NZ ? A LYS 181 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 XDS 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _cell.entry_id 4DSO _cell.length_a 79.374 _cell.length_b 79.374 _cell.length_c 77.749 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4DSO _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4DSO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.19 _exptl_crystal.density_percent_sol 43.81 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;0.2 uL + 0.2 uL drops containing 40 mg/mL KRas, 0.1 M TrisCl, 25% polyethylene glycol 4000, 0.2 M NaOAc, 2% benzamidine-HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K ; # _diffrn.id 1 _diffrn.ambient_temp 93 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2009-01-14 _diffrn_detector.details 'Side scattering bent cube-root I-beam single crystal; asymmetric cut 4.965 degs' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Side scattering bent cube-root I-beam single crystal; asymmetric cut 4.965 degs' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97945 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97945 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4DSO _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.85 _reflns.number_obs 14782 _reflns.number_all ? _reflns.percent_possible_obs 98.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.059 _reflns.pdbx_netI_over_sigmaI 18.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.85 _reflns_shell.d_res_low 1.99 _reflns_shell.percent_possible_all 82.2 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.158 _reflns_shell.meanI_over_sigI_obs 7.4 _reflns_shell.pdbx_redundancy 4.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4DSO _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 14782 _refine.ls_number_reflns_all 15563 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.92 _refine.ls_d_res_high 1.85 _refine.ls_percent_reflns_obs 99.84 _refine.ls_R_factor_obs 0.17211 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17022 _refine.ls_R_factor_R_free 0.20705 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 781 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.965 _refine.correlation_coeff_Fo_to_Fc_free 0.942 _refine.B_iso_mean 39.076 _refine.aniso_B[1][1] -0.41 _refine.aniso_B[2][2] -0.41 _refine.aniso_B[3][3] 0.61 _refine.aniso_B[1][2] -0.20 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.141 _refine.pdbx_overall_ESU_R_Free 0.129 _refine.overall_SU_ML 0.095 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 6.887 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1417 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 48 _refine_hist.number_atoms_solvent 149 _refine_hist.number_atoms_total 1614 _refine_hist.d_res_high 1.85 _refine_hist.d_res_low 25.92 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 1487 'X-RAY DIFFRACTION' ? r_bond_other_d 0.005 0.020 ? 997 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.066 1.996 ? 2011 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.953 3.000 ? 2428 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.500 5.000 ? 179 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.387 24.648 ? 71 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.615 15.000 ? 261 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 20.783 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.088 0.200 ? 222 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 1638 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.005 0.020 ? 295 'X-RAY DIFFRACTION' ? r_nbd_refined 0.227 0.200 ? 329 'X-RAY DIFFRACTION' ? r_nbd_other 0.214 0.200 ? 1121 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.178 0.200 ? 728 'X-RAY DIFFRACTION' ? r_nbtor_other 0.086 0.200 ? 768 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.204 0.200 ? 134 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.105 0.200 ? 2 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.231 0.200 ? 25 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.308 0.200 ? 52 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.498 0.200 ? 14 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.200 1.500 ? 1178 'X-RAY DIFFRACTION' ? r_mcbond_other 0.211 1.500 ? 369 'X-RAY DIFFRACTION' ? r_mcangle_it 1.358 2.000 ? 1443 'X-RAY DIFFRACTION' ? r_scbond_it 2.084 3.000 ? 684 'X-RAY DIFFRACTION' ? r_scangle_it 2.880 4.500 ? 568 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 25 _refine_ls_shell.d_res_high 1.85 _refine_ls_shell.d_res_low 1.889 _refine_ls_shell.number_reflns_R_work 887 _refine_ls_shell.R_factor_R_work 0.227 _refine_ls_shell.percent_reflns_obs 99.89 _refine_ls_shell.R_factor_R_free 0.285 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 46 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _database_PDB_matrix.entry_id 4DSO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4DSO _struct.title 'Small-molecule ligands bind to a distinct pocket in Ras and inhibit SOS-mediated nucleotide exchange activity' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DSO _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'Small G-protein, signaling, Hydrolase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RASK_HUMAN _struct_ref.pdbx_db_accession P01116 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCV FAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVR EIRKHKEKMSKDGKKKKKKSKTKCVIM ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4DSO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 189 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P01116 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 188 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 188 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4DSO GLY A 1 ? UNP P01116 ? ? 'expression tag' 0 1 1 4DSO SER A 2 ? UNP P01116 ? ? 'expression tag' 1 2 1 4DSO ASP A 13 ? UNP P01116 GLY 12 'engineered mutation' 12 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 16 ? ASN A 27 ? GLY A 15 ASN A 26 1 ? 12 HELX_P HELX_P2 2 MET A 68 ? GLY A 76 ? MET A 67 GLY A 75 1 ? 9 HELX_P HELX_P3 3 ASN A 87 ? LYS A 105 ? ASN A 86 LYS A 104 1 ? 19 HELX_P HELX_P4 4 ASP A 127 ? GLY A 139 ? ASP A 126 GLY A 138 1 ? 13 HELX_P HELX_P5 5 GLY A 152 ? ASP A 174 ? GLY A 151 ASP A 173 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 18 OG ? ? ? 1_555 C MG . MG ? ? A SER 17 A MG 202 1_555 ? ? ? ? ? ? ? 1.956 ? ? metalc2 metalc ? ? A THR 36 OG1 ? ? ? 1_555 C MG . MG ? ? A THR 35 A MG 202 1_555 ? ? ? ? ? ? ? 2.154 ? ? metalc3 metalc ? ? B GSP . O3G ? ? ? 1_555 C MG . MG ? ? A GSP 201 A MG 202 1_555 ? ? ? ? ? ? ? 1.845 ? ? metalc4 metalc ? ? B GSP . O2B ? ? ? 1_555 C MG . MG ? ? A GSP 201 A MG 202 1_555 ? ? ? ? ? ? ? 2.128 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 202 A HOH 322 1_555 ? ? ? ? ? ? ? 2.035 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 202 A HOH 366 1_555 ? ? ? ? ? ? ? 2.270 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 18 ? A SER 17 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 OG1 ? A THR 36 ? A THR 35 ? 1_555 83.3 ? 2 OG ? A SER 18 ? A SER 17 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O3G ? B GSP . ? A GSP 201 ? 1_555 172.6 ? 3 OG1 ? A THR 36 ? A THR 35 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O3G ? B GSP . ? A GSP 201 ? 1_555 90.2 ? 4 OG ? A SER 18 ? A SER 17 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O2B ? B GSP . ? A GSP 201 ? 1_555 89.7 ? 5 OG1 ? A THR 36 ? A THR 35 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O2B ? B GSP . ? A GSP 201 ? 1_555 173.0 ? 6 O3G ? B GSP . ? A GSP 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O2B ? B GSP . ? A GSP 201 ? 1_555 96.7 ? 7 OG ? A SER 18 ? A SER 17 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 322 ? 1_555 86.8 ? 8 OG1 ? A THR 36 ? A THR 35 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 322 ? 1_555 88.0 ? 9 O3G ? B GSP . ? A GSP 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 322 ? 1_555 96.6 ? 10 O2B ? B GSP . ? A GSP 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 322 ? 1_555 91.5 ? 11 OG ? A SER 18 ? A SER 17 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 366 ? 1_555 89.0 ? 12 OG1 ? A THR 36 ? A THR 35 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 366 ? 1_555 90.0 ? 13 O3G ? B GSP . ? A GSP 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 366 ? 1_555 87.3 ? 14 O2B ? B GSP . ? A GSP 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 366 ? 1_555 90.0 ? 15 O ? F HOH . ? A HOH 322 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 366 ? 1_555 175.6 ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 38 ? ILE A 47 ? GLU A 37 ILE A 46 A 2 GLU A 50 ? THR A 59 ? GLU A 49 THR A 58 A 3 THR A 3 ? VAL A 10 ? THR A 2 VAL A 9 A 4 GLY A 78 ? ALA A 84 ? GLY A 77 ALA A 83 A 5 MET A 112 ? ASN A 117 ? MET A 111 ASN A 116 A 6 PHE A 142 ? GLU A 144 ? PHE A 141 GLU A 143 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 45 ? N VAL A 44 O CYS A 52 ? O CYS A 51 A 2 3 O LEU A 57 ? O LEU A 56 N VAL A 9 ? N VAL A 8 A 3 4 N VAL A 10 ? N VAL A 9 O LEU A 80 ? O LEU A 79 A 4 5 N CYS A 81 ? N CYS A 80 O VAL A 115 ? O VAL A 114 A 5 6 N LEU A 114 ? N LEU A 113 O ILE A 143 ? O ILE A 142 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GSP 201 ? 28 'BINDING SITE FOR RESIDUE GSP A 201' AC2 Software A MG 202 ? 5 'BINDING SITE FOR RESIDUE MG A 202' AC3 Software A BEN 203 ? 9 'BINDING SITE FOR RESIDUE BEN A 203' AC4 Software A GOL 204 ? 7 'BINDING SITE FOR RESIDUE GOL A 204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 28 ASP A 13 ? ASP A 12 . ? 1_555 ? 2 AC1 28 GLY A 14 ? GLY A 13 . ? 1_555 ? 3 AC1 28 VAL A 15 ? VAL A 14 . ? 1_555 ? 4 AC1 28 GLY A 16 ? GLY A 15 . ? 1_555 ? 5 AC1 28 LYS A 17 ? LYS A 16 . ? 1_555 ? 6 AC1 28 SER A 18 ? SER A 17 . ? 1_555 ? 7 AC1 28 ALA A 19 ? ALA A 18 . ? 1_555 ? 8 AC1 28 PHE A 29 ? PHE A 28 . ? 1_555 ? 9 AC1 28 VAL A 30 ? VAL A 29 . ? 1_555 ? 10 AC1 28 ASP A 31 ? ASP A 30 . ? 1_555 ? 11 AC1 28 GLU A 32 ? GLU A 31 . ? 1_555 ? 12 AC1 28 TYR A 33 ? TYR A 32 . ? 1_555 ? 13 AC1 28 THR A 36 ? THR A 35 . ? 1_555 ? 14 AC1 28 GLY A 61 ? GLY A 60 . ? 1_555 ? 15 AC1 28 ASN A 117 ? ASN A 116 . ? 1_555 ? 16 AC1 28 LYS A 118 ? LYS A 117 . ? 1_555 ? 17 AC1 28 ASP A 120 ? ASP A 119 . ? 1_555 ? 18 AC1 28 LEU A 121 ? LEU A 120 . ? 1_555 ? 19 AC1 28 SER A 146 ? SER A 145 . ? 1_555 ? 20 AC1 28 ALA A 147 ? ALA A 146 . ? 1_555 ? 21 AC1 28 LYS A 148 ? LYS A 147 . ? 1_555 ? 22 AC1 28 MG C . ? MG A 202 . ? 1_555 ? 23 AC1 28 HOH F . ? HOH A 322 . ? 1_555 ? 24 AC1 28 HOH F . ? HOH A 347 . ? 1_555 ? 25 AC1 28 HOH F . ? HOH A 366 . ? 1_555 ? 26 AC1 28 HOH F . ? HOH A 419 . ? 1_555 ? 27 AC1 28 HOH F . ? HOH A 429 . ? 1_555 ? 28 AC1 28 HOH F . ? HOH A 436 . ? 1_555 ? 29 AC2 5 SER A 18 ? SER A 17 . ? 1_555 ? 30 AC2 5 THR A 36 ? THR A 35 . ? 1_555 ? 31 AC2 5 GSP B . ? GSP A 201 . ? 1_555 ? 32 AC2 5 HOH F . ? HOH A 322 . ? 1_555 ? 33 AC2 5 HOH F . ? HOH A 366 . ? 1_555 ? 34 AC3 9 LEU A 7 ? LEU A 6 . ? 1_555 ? 35 AC3 9 SER A 40 ? SER A 39 . ? 1_555 ? 36 AC3 9 ARG A 42 ? ARG A 41 . ? 1_555 ? 37 AC3 9 ASP A 55 ? ASP A 54 . ? 1_555 ? 38 AC3 9 LEU A 57 ? LEU A 56 . ? 1_555 ? 39 AC3 9 THR A 75 ? THR A 74 . ? 1_555 ? 40 AC3 9 CYS A 119 ? CYS A 118 . ? 6_555 ? 41 AC3 9 HOH F . ? HOH A 316 . ? 1_555 ? 42 AC3 9 HOH F . ? HOH A 317 . ? 1_555 ? 43 AC4 7 GLU A 63 ? GLU A 62 . ? 1_555 ? 44 AC4 7 ARG A 69 ? ARG A 68 . ? 1_555 ? 45 AC4 7 ASP A 93 ? ASP A 92 . ? 1_555 ? 46 AC4 7 HIS A 96 ? HIS A 95 . ? 1_555 ? 47 AC4 7 TYR A 97 ? TYR A 96 . ? 1_555 ? 48 AC4 7 GLN A 100 ? GLN A 99 . ? 1_555 ? 49 AC4 7 HOH F . ? HOH A 384 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD1 A ASP 30 ? ? O A HOH 347 ? ? 2.00 2 1 O A MET 67 ? ? O A HOH 388 ? ? 2.19 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 327 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 379 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_555 _pdbx_validate_symm_contact.dist 1.01 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 NE A ARG 73 ? ? CZ A ARG 73 ? ? 1.476 1.326 0.150 0.013 N 2 1 CZ A ARG 73 ? ? NH1 A ARG 73 ? ? 1.440 1.326 0.114 0.013 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 73 ? ? CZ A ARG 73 ? ? NH1 A ARG 73 ? ? 127.97 120.30 7.67 0.50 N 2 1 NE A ARG 73 ? ? CZ A ARG 73 ? ? NH2 A ARG 73 ? ? 114.18 120.30 -6.12 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 37 ? ? -171.59 108.43 2 1 GLU A 62 ? ? 81.50 -144.20 3 1 GLU A 63 ? ? 61.56 -59.35 4 1 TYR A 64 ? ? -39.05 178.19 5 1 SER A 65 ? ? 106.23 -9.93 6 1 ALA A 66 ? ? -96.43 -71.29 7 1 LYS A 117 ? ? 74.55 33.43 8 1 ARG A 149 ? ? 75.44 -0.11 9 1 ASP A 173 ? ? 54.52 -146.62 10 1 LYS A 175 ? ? -155.63 -158.70 11 1 LYS A 176 ? ? 80.32 -61.83 12 1 LYS A 177 ? ? -105.38 -67.88 13 1 LYS A 178 ? ? 76.89 175.70 14 1 LYS A 179 ? ? -168.16 -89.34 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 GLU A 62 ? ? GLU A 63 ? ? -149.81 2 1 TYR A 64 ? ? SER A 65 ? ? -143.96 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 431 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 18.5910 19.1790 4.5500 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 3.3018 6.4875 0.8736 -0.8399 0.2515 2.2513 -0.1552 0.2020 -0.0468 -0.2858 0.2268 0.0300 -0.4001 -0.3711 0.0326 'X-RAY DIFFRACTION' 2 ? refined 18.6410 9.9230 0.1420 -0.1602 -0.1241 -0.1587 0.0134 -0.0318 -0.0184 4.3176 4.4417 2.7320 0.9070 0.6767 0.7526 -0.0434 -0.0184 0.0618 -0.2859 0.3336 -0.0459 0.2113 -0.1016 0.1147 'X-RAY DIFFRACTION' 3 ? refined 15.2190 6.2470 -0.5870 0.0846 -0.0692 0.0067 0.0409 -0.0254 -0.0179 3.8309 1.8630 0.9806 0.5690 1.1152 0.3902 -0.0781 -0.0957 0.1738 -0.2659 0.3223 0.1188 0.0436 -0.0867 0.0456 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 448 A 449 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 1 A 180 ? . . . . ? 'X-RAY DIFFRACTION' 3 2 A 201 A 201 ? . . . . ? 'X-RAY DIFFRACTION' 4 2 A 203 A 203 ? . . . . ? 'X-RAY DIFFRACTION' 5 2 A 204 A 204 ? . . . . ? 'X-RAY DIFFRACTION' 6 2 A 301 A 422 ? . . . . ? 'X-RAY DIFFRACTION' 7 3 A 423 A 447 ? . . . . ? # _pdbx_entry_details.entry_id 4DSO _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'THE SEQUENCE MATCHES UNIPROT ENTRY P01116, ISOFORM 2B WITH IDENTIFIER P01116-2.' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A SER 181 ? A SER 182 3 1 Y 1 A LYS 182 ? A LYS 183 4 1 Y 1 A THR 183 ? A THR 184 5 1 Y 1 A LYS 184 ? A LYS 185 6 1 Y 1 A CYS 185 ? A CYS 186 7 1 Y 1 A VAL 186 ? A VAL 187 8 1 Y 1 A ILE 187 ? A ILE 188 9 1 Y 1 A MET 188 ? A MET 189 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BEN C1 C Y N 74 BEN C2 C Y N 75 BEN C3 C Y N 76 BEN C4 C Y N 77 BEN C5 C Y N 78 BEN C6 C Y N 79 BEN C C N N 80 BEN N1 N N N 81 BEN N2 N N N 82 BEN H2 H N N 83 BEN H3 H N N 84 BEN H4 H N N 85 BEN H5 H N N 86 BEN H6 H N N 87 BEN HN1 H N N 88 BEN HN21 H N N 89 BEN HN22 H N N 90 CYS N N N N 91 CYS CA C N R 92 CYS C C N N 93 CYS O O N N 94 CYS CB C N N 95 CYS SG S N N 96 CYS OXT O N N 97 CYS H H N N 98 CYS H2 H N N 99 CYS HA H N N 100 CYS HB2 H N N 101 CYS HB3 H N N 102 CYS HG H N N 103 CYS HXT H N N 104 GLN N N N N 105 GLN CA C N S 106 GLN C C N N 107 GLN O O N N 108 GLN CB C N N 109 GLN CG C N N 110 GLN CD C N N 111 GLN OE1 O N N 112 GLN NE2 N N N 113 GLN OXT O N N 114 GLN H H N N 115 GLN H2 H N N 116 GLN HA H N N 117 GLN HB2 H N N 118 GLN HB3 H N N 119 GLN HG2 H N N 120 GLN HG3 H N N 121 GLN HE21 H N N 122 GLN HE22 H N N 123 GLN HXT H N N 124 GLU N N N N 125 GLU CA C N S 126 GLU C C N N 127 GLU O O N N 128 GLU CB C N N 129 GLU CG C N N 130 GLU CD C N N 131 GLU OE1 O N N 132 GLU OE2 O N N 133 GLU OXT O N N 134 GLU H H N N 135 GLU H2 H N N 136 GLU HA H N N 137 GLU HB2 H N N 138 GLU HB3 H N N 139 GLU HG2 H N N 140 GLU HG3 H N N 141 GLU HE2 H N N 142 GLU HXT H N N 143 GLY N N N N 144 GLY CA C N N 145 GLY C C N N 146 GLY O O N N 147 GLY OXT O N N 148 GLY H H N N 149 GLY H2 H N N 150 GLY HA2 H N N 151 GLY HA3 H N N 152 GLY HXT H N N 153 GOL C1 C N N 154 GOL O1 O N N 155 GOL C2 C N N 156 GOL O2 O N N 157 GOL C3 C N N 158 GOL O3 O N N 159 GOL H11 H N N 160 GOL H12 H N N 161 GOL HO1 H N N 162 GOL H2 H N N 163 GOL HO2 H N N 164 GOL H31 H N N 165 GOL H32 H N N 166 GOL HO3 H N N 167 GSP PG P N N 168 GSP O3B O N N 169 GSP S1G S N N 170 GSP O2G O N N 171 GSP O3G O N N 172 GSP PB P N S 173 GSP O1B O N N 174 GSP O2B O N N 175 GSP PA P N S 176 GSP O1A O N N 177 GSP O2A O N N 178 GSP O3A O N N 179 GSP "O5'" O N N 180 GSP "C5'" C N N 181 GSP "C4'" C N R 182 GSP "O4'" O N N 183 GSP "C3'" C N S 184 GSP "O3'" O N N 185 GSP "C2'" C N R 186 GSP "O2'" O N N 187 GSP "C1'" C N R 188 GSP N9 N Y N 189 GSP C8 C Y N 190 GSP N7 N Y N 191 GSP C5 C Y N 192 GSP C6 C N N 193 GSP O6 O N N 194 GSP N1 N N N 195 GSP C2 C N N 196 GSP N2 N N N 197 GSP N3 N N N 198 GSP C4 C Y N 199 GSP HOG2 H N N 200 GSP HOG3 H N N 201 GSP HOB2 H N N 202 GSP HOA2 H N N 203 GSP "H5'1" H N N 204 GSP "H5'2" H N N 205 GSP "H4'" H N N 206 GSP "H3'" H N N 207 GSP "HO3'" H N N 208 GSP "H2'" H N N 209 GSP "HO2'" H N N 210 GSP "H1'" H N N 211 GSP H8 H N N 212 GSP HN1 H N N 213 GSP HN21 H N N 214 GSP HN22 H N N 215 HIS N N N N 216 HIS CA C N S 217 HIS C C N N 218 HIS O O N N 219 HIS CB C N N 220 HIS CG C Y N 221 HIS ND1 N Y N 222 HIS CD2 C Y N 223 HIS CE1 C Y N 224 HIS NE2 N Y N 225 HIS OXT O N N 226 HIS H H N N 227 HIS H2 H N N 228 HIS HA H N N 229 HIS HB2 H N N 230 HIS HB3 H N N 231 HIS HD1 H N N 232 HIS HD2 H N N 233 HIS HE1 H N N 234 HIS HE2 H N N 235 HIS HXT H N N 236 HOH O O N N 237 HOH H1 H N N 238 HOH H2 H N N 239 ILE N N N N 240 ILE CA C N S 241 ILE C C N N 242 ILE O O N N 243 ILE CB C N S 244 ILE CG1 C N N 245 ILE CG2 C N N 246 ILE CD1 C N N 247 ILE OXT O N N 248 ILE H H N N 249 ILE H2 H N N 250 ILE HA H N N 251 ILE HB H N N 252 ILE HG12 H N N 253 ILE HG13 H N N 254 ILE HG21 H N N 255 ILE HG22 H N N 256 ILE HG23 H N N 257 ILE HD11 H N N 258 ILE HD12 H N N 259 ILE HD13 H N N 260 ILE HXT H N N 261 LEU N N N N 262 LEU CA C N S 263 LEU C C N N 264 LEU O O N N 265 LEU CB C N N 266 LEU CG C N N 267 LEU CD1 C N N 268 LEU CD2 C N N 269 LEU OXT O N N 270 LEU H H N N 271 LEU H2 H N N 272 LEU HA H N N 273 LEU HB2 H N N 274 LEU HB3 H N N 275 LEU HG H N N 276 LEU HD11 H N N 277 LEU HD12 H N N 278 LEU HD13 H N N 279 LEU HD21 H N N 280 LEU HD22 H N N 281 LEU HD23 H N N 282 LEU HXT H N N 283 LYS N N N N 284 LYS CA C N S 285 LYS C C N N 286 LYS O O N N 287 LYS CB C N N 288 LYS CG C N N 289 LYS CD C N N 290 LYS CE C N N 291 LYS NZ N N N 292 LYS OXT O N N 293 LYS H H N N 294 LYS H2 H N N 295 LYS HA H N N 296 LYS HB2 H N N 297 LYS HB3 H N N 298 LYS HG2 H N N 299 LYS HG3 H N N 300 LYS HD2 H N N 301 LYS HD3 H N N 302 LYS HE2 H N N 303 LYS HE3 H N N 304 LYS HZ1 H N N 305 LYS HZ2 H N N 306 LYS HZ3 H N N 307 LYS HXT H N N 308 MET N N N N 309 MET CA C N S 310 MET C C N N 311 MET O O N N 312 MET CB C N N 313 MET CG C N N 314 MET SD S N N 315 MET CE C N N 316 MET OXT O N N 317 MET H H N N 318 MET H2 H N N 319 MET HA H N N 320 MET HB2 H N N 321 MET HB3 H N N 322 MET HG2 H N N 323 MET HG3 H N N 324 MET HE1 H N N 325 MET HE2 H N N 326 MET HE3 H N N 327 MET HXT H N N 328 MG MG MG N N 329 PHE N N N N 330 PHE CA C N S 331 PHE C C N N 332 PHE O O N N 333 PHE CB C N N 334 PHE CG C Y N 335 PHE CD1 C Y N 336 PHE CD2 C Y N 337 PHE CE1 C Y N 338 PHE CE2 C Y N 339 PHE CZ C Y N 340 PHE OXT O N N 341 PHE H H N N 342 PHE H2 H N N 343 PHE HA H N N 344 PHE HB2 H N N 345 PHE HB3 H N N 346 PHE HD1 H N N 347 PHE HD2 H N N 348 PHE HE1 H N N 349 PHE HE2 H N N 350 PHE HZ H N N 351 PHE HXT H N N 352 PRO N N N N 353 PRO CA C N S 354 PRO C C N N 355 PRO O O N N 356 PRO CB C N N 357 PRO CG C N N 358 PRO CD C N N 359 PRO OXT O N N 360 PRO H H N N 361 PRO HA H N N 362 PRO HB2 H N N 363 PRO HB3 H N N 364 PRO HG2 H N N 365 PRO HG3 H N N 366 PRO HD2 H N N 367 PRO HD3 H N N 368 PRO HXT H N N 369 SER N N N N 370 SER CA C N S 371 SER C C N N 372 SER O O N N 373 SER CB C N N 374 SER OG O N N 375 SER OXT O N N 376 SER H H N N 377 SER H2 H N N 378 SER HA H N N 379 SER HB2 H N N 380 SER HB3 H N N 381 SER HG H N N 382 SER HXT H N N 383 THR N N N N 384 THR CA C N S 385 THR C C N N 386 THR O O N N 387 THR CB C N R 388 THR OG1 O N N 389 THR CG2 C N N 390 THR OXT O N N 391 THR H H N N 392 THR H2 H N N 393 THR HA H N N 394 THR HB H N N 395 THR HG1 H N N 396 THR HG21 H N N 397 THR HG22 H N N 398 THR HG23 H N N 399 THR HXT H N N 400 TYR N N N N 401 TYR CA C N S 402 TYR C C N N 403 TYR O O N N 404 TYR CB C N N 405 TYR CG C Y N 406 TYR CD1 C Y N 407 TYR CD2 C Y N 408 TYR CE1 C Y N 409 TYR CE2 C Y N 410 TYR CZ C Y N 411 TYR OH O N N 412 TYR OXT O N N 413 TYR H H N N 414 TYR H2 H N N 415 TYR HA H N N 416 TYR HB2 H N N 417 TYR HB3 H N N 418 TYR HD1 H N N 419 TYR HD2 H N N 420 TYR HE1 H N N 421 TYR HE2 H N N 422 TYR HH H N N 423 TYR HXT H N N 424 VAL N N N N 425 VAL CA C N S 426 VAL C C N N 427 VAL O O N N 428 VAL CB C N N 429 VAL CG1 C N N 430 VAL CG2 C N N 431 VAL OXT O N N 432 VAL H H N N 433 VAL H2 H N N 434 VAL HA H N N 435 VAL HB H N N 436 VAL HG11 H N N 437 VAL HG12 H N N 438 VAL HG13 H N N 439 VAL HG21 H N N 440 VAL HG22 H N N 441 VAL HG23 H N N 442 VAL HXT H N N 443 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BEN C1 C2 doub Y N 70 BEN C1 C6 sing Y N 71 BEN C1 C sing N N 72 BEN C2 C3 sing Y N 73 BEN C2 H2 sing N N 74 BEN C3 C4 doub Y N 75 BEN C3 H3 sing N N 76 BEN C4 C5 sing Y N 77 BEN C4 H4 sing N N 78 BEN C5 C6 doub Y N 79 BEN C5 H5 sing N N 80 BEN C6 H6 sing N N 81 BEN C N1 doub N E 82 BEN C N2 sing N N 83 BEN N1 HN1 sing N N 84 BEN N2 HN21 sing N N 85 BEN N2 HN22 sing N N 86 CYS N CA sing N N 87 CYS N H sing N N 88 CYS N H2 sing N N 89 CYS CA C sing N N 90 CYS CA CB sing N N 91 CYS CA HA sing N N 92 CYS C O doub N N 93 CYS C OXT sing N N 94 CYS CB SG sing N N 95 CYS CB HB2 sing N N 96 CYS CB HB3 sing N N 97 CYS SG HG sing N N 98 CYS OXT HXT sing N N 99 GLN N CA sing N N 100 GLN N H sing N N 101 GLN N H2 sing N N 102 GLN CA C sing N N 103 GLN CA CB sing N N 104 GLN CA HA sing N N 105 GLN C O doub N N 106 GLN C OXT sing N N 107 GLN CB CG sing N N 108 GLN CB HB2 sing N N 109 GLN CB HB3 sing N N 110 GLN CG CD sing N N 111 GLN CG HG2 sing N N 112 GLN CG HG3 sing N N 113 GLN CD OE1 doub N N 114 GLN CD NE2 sing N N 115 GLN NE2 HE21 sing N N 116 GLN NE2 HE22 sing N N 117 GLN OXT HXT sing N N 118 GLU N CA sing N N 119 GLU N H sing N N 120 GLU N H2 sing N N 121 GLU CA C sing N N 122 GLU CA CB sing N N 123 GLU CA HA sing N N 124 GLU C O doub N N 125 GLU C OXT sing N N 126 GLU CB CG sing N N 127 GLU CB HB2 sing N N 128 GLU CB HB3 sing N N 129 GLU CG CD sing N N 130 GLU CG HG2 sing N N 131 GLU CG HG3 sing N N 132 GLU CD OE1 doub N N 133 GLU CD OE2 sing N N 134 GLU OE2 HE2 sing N N 135 GLU OXT HXT sing N N 136 GLY N CA sing N N 137 GLY N H sing N N 138 GLY N H2 sing N N 139 GLY CA C sing N N 140 GLY CA HA2 sing N N 141 GLY CA HA3 sing N N 142 GLY C O doub N N 143 GLY C OXT sing N N 144 GLY OXT HXT sing N N 145 GOL C1 O1 sing N N 146 GOL C1 C2 sing N N 147 GOL C1 H11 sing N N 148 GOL C1 H12 sing N N 149 GOL O1 HO1 sing N N 150 GOL C2 O2 sing N N 151 GOL C2 C3 sing N N 152 GOL C2 H2 sing N N 153 GOL O2 HO2 sing N N 154 GOL C3 O3 sing N N 155 GOL C3 H31 sing N N 156 GOL C3 H32 sing N N 157 GOL O3 HO3 sing N N 158 GSP PG O3B sing N N 159 GSP PG S1G doub N N 160 GSP PG O2G sing N N 161 GSP PG O3G sing N N 162 GSP O3B PB sing N N 163 GSP O2G HOG2 sing N N 164 GSP O3G HOG3 sing N N 165 GSP PB O1B doub N N 166 GSP PB O2B sing N N 167 GSP PB O3A sing N N 168 GSP O2B HOB2 sing N N 169 GSP PA O1A doub N N 170 GSP PA O2A sing N N 171 GSP PA O3A sing N N 172 GSP PA "O5'" sing N N 173 GSP O2A HOA2 sing N N 174 GSP "O5'" "C5'" sing N N 175 GSP "C5'" "C4'" sing N N 176 GSP "C5'" "H5'1" sing N N 177 GSP "C5'" "H5'2" sing N N 178 GSP "C4'" "O4'" sing N N 179 GSP "C4'" "C3'" sing N N 180 GSP "C4'" "H4'" sing N N 181 GSP "O4'" "C1'" sing N N 182 GSP "C3'" "O3'" sing N N 183 GSP "C3'" "C2'" sing N N 184 GSP "C3'" "H3'" sing N N 185 GSP "O3'" "HO3'" sing N N 186 GSP "C2'" "O2'" sing N N 187 GSP "C2'" "C1'" sing N N 188 GSP "C2'" "H2'" sing N N 189 GSP "O2'" "HO2'" sing N N 190 GSP "C1'" N9 sing N N 191 GSP "C1'" "H1'" sing N N 192 GSP N9 C8 sing Y N 193 GSP N9 C4 sing Y N 194 GSP C8 N7 doub Y N 195 GSP C8 H8 sing N N 196 GSP N7 C5 sing Y N 197 GSP C5 C6 sing N N 198 GSP C5 C4 doub Y N 199 GSP C6 O6 doub N N 200 GSP C6 N1 sing N N 201 GSP N1 C2 sing N N 202 GSP N1 HN1 sing N N 203 GSP C2 N2 sing N N 204 GSP C2 N3 doub N N 205 GSP N2 HN21 sing N N 206 GSP N2 HN22 sing N N 207 GSP N3 C4 sing N N 208 HIS N CA sing N N 209 HIS N H sing N N 210 HIS N H2 sing N N 211 HIS CA C sing N N 212 HIS CA CB sing N N 213 HIS CA HA sing N N 214 HIS C O doub N N 215 HIS C OXT sing N N 216 HIS CB CG sing N N 217 HIS CB HB2 sing N N 218 HIS CB HB3 sing N N 219 HIS CG ND1 sing Y N 220 HIS CG CD2 doub Y N 221 HIS ND1 CE1 doub Y N 222 HIS ND1 HD1 sing N N 223 HIS CD2 NE2 sing Y N 224 HIS CD2 HD2 sing N N 225 HIS CE1 NE2 sing Y N 226 HIS CE1 HE1 sing N N 227 HIS NE2 HE2 sing N N 228 HIS OXT HXT sing N N 229 HOH O H1 sing N N 230 HOH O H2 sing N N 231 ILE N CA sing N N 232 ILE N H sing N N 233 ILE N H2 sing N N 234 ILE CA C sing N N 235 ILE CA CB sing N N 236 ILE CA HA sing N N 237 ILE C O doub N N 238 ILE C OXT sing N N 239 ILE CB CG1 sing N N 240 ILE CB CG2 sing N N 241 ILE CB HB sing N N 242 ILE CG1 CD1 sing N N 243 ILE CG1 HG12 sing N N 244 ILE CG1 HG13 sing N N 245 ILE CG2 HG21 sing N N 246 ILE CG2 HG22 sing N N 247 ILE CG2 HG23 sing N N 248 ILE CD1 HD11 sing N N 249 ILE CD1 HD12 sing N N 250 ILE CD1 HD13 sing N N 251 ILE OXT HXT sing N N 252 LEU N CA sing N N 253 LEU N H sing N N 254 LEU N H2 sing N N 255 LEU CA C sing N N 256 LEU CA CB sing N N 257 LEU CA HA sing N N 258 LEU C O doub N N 259 LEU C OXT sing N N 260 LEU CB CG sing N N 261 LEU CB HB2 sing N N 262 LEU CB HB3 sing N N 263 LEU CG CD1 sing N N 264 LEU CG CD2 sing N N 265 LEU CG HG sing N N 266 LEU CD1 HD11 sing N N 267 LEU CD1 HD12 sing N N 268 LEU CD1 HD13 sing N N 269 LEU CD2 HD21 sing N N 270 LEU CD2 HD22 sing N N 271 LEU CD2 HD23 sing N N 272 LEU OXT HXT sing N N 273 LYS N CA sing N N 274 LYS N H sing N N 275 LYS N H2 sing N N 276 LYS CA C sing N N 277 LYS CA CB sing N N 278 LYS CA HA sing N N 279 LYS C O doub N N 280 LYS C OXT sing N N 281 LYS CB CG sing N N 282 LYS CB HB2 sing N N 283 LYS CB HB3 sing N N 284 LYS CG CD sing N N 285 LYS CG HG2 sing N N 286 LYS CG HG3 sing N N 287 LYS CD CE sing N N 288 LYS CD HD2 sing N N 289 LYS CD HD3 sing N N 290 LYS CE NZ sing N N 291 LYS CE HE2 sing N N 292 LYS CE HE3 sing N N 293 LYS NZ HZ1 sing N N 294 LYS NZ HZ2 sing N N 295 LYS NZ HZ3 sing N N 296 LYS OXT HXT sing N N 297 MET N CA sing N N 298 MET N H sing N N 299 MET N H2 sing N N 300 MET CA C sing N N 301 MET CA CB sing N N 302 MET CA HA sing N N 303 MET C O doub N N 304 MET C OXT sing N N 305 MET CB CG sing N N 306 MET CB HB2 sing N N 307 MET CB HB3 sing N N 308 MET CG SD sing N N 309 MET CG HG2 sing N N 310 MET CG HG3 sing N N 311 MET SD CE sing N N 312 MET CE HE1 sing N N 313 MET CE HE2 sing N N 314 MET CE HE3 sing N N 315 MET OXT HXT sing N N 316 PHE N CA sing N N 317 PHE N H sing N N 318 PHE N H2 sing N N 319 PHE CA C sing N N 320 PHE CA CB sing N N 321 PHE CA HA sing N N 322 PHE C O doub N N 323 PHE C OXT sing N N 324 PHE CB CG sing N N 325 PHE CB HB2 sing N N 326 PHE CB HB3 sing N N 327 PHE CG CD1 doub Y N 328 PHE CG CD2 sing Y N 329 PHE CD1 CE1 sing Y N 330 PHE CD1 HD1 sing N N 331 PHE CD2 CE2 doub Y N 332 PHE CD2 HD2 sing N N 333 PHE CE1 CZ doub Y N 334 PHE CE1 HE1 sing N N 335 PHE CE2 CZ sing Y N 336 PHE CE2 HE2 sing N N 337 PHE CZ HZ sing N N 338 PHE OXT HXT sing N N 339 PRO N CA sing N N 340 PRO N CD sing N N 341 PRO N H sing N N 342 PRO CA C sing N N 343 PRO CA CB sing N N 344 PRO CA HA sing N N 345 PRO C O doub N N 346 PRO C OXT sing N N 347 PRO CB CG sing N N 348 PRO CB HB2 sing N N 349 PRO CB HB3 sing N N 350 PRO CG CD sing N N 351 PRO CG HG2 sing N N 352 PRO CG HG3 sing N N 353 PRO CD HD2 sing N N 354 PRO CD HD3 sing N N 355 PRO OXT HXT sing N N 356 SER N CA sing N N 357 SER N H sing N N 358 SER N H2 sing N N 359 SER CA C sing N N 360 SER CA CB sing N N 361 SER CA HA sing N N 362 SER C O doub N N 363 SER C OXT sing N N 364 SER CB OG sing N N 365 SER CB HB2 sing N N 366 SER CB HB3 sing N N 367 SER OG HG sing N N 368 SER OXT HXT sing N N 369 THR N CA sing N N 370 THR N H sing N N 371 THR N H2 sing N N 372 THR CA C sing N N 373 THR CA CB sing N N 374 THR CA HA sing N N 375 THR C O doub N N 376 THR C OXT sing N N 377 THR CB OG1 sing N N 378 THR CB CG2 sing N N 379 THR CB HB sing N N 380 THR OG1 HG1 sing N N 381 THR CG2 HG21 sing N N 382 THR CG2 HG22 sing N N 383 THR CG2 HG23 sing N N 384 THR OXT HXT sing N N 385 TYR N CA sing N N 386 TYR N H sing N N 387 TYR N H2 sing N N 388 TYR CA C sing N N 389 TYR CA CB sing N N 390 TYR CA HA sing N N 391 TYR C O doub N N 392 TYR C OXT sing N N 393 TYR CB CG sing N N 394 TYR CB HB2 sing N N 395 TYR CB HB3 sing N N 396 TYR CG CD1 doub Y N 397 TYR CG CD2 sing Y N 398 TYR CD1 CE1 sing Y N 399 TYR CD1 HD1 sing N N 400 TYR CD2 CE2 doub Y N 401 TYR CD2 HD2 sing N N 402 TYR CE1 CZ doub Y N 403 TYR CE1 HE1 sing N N 404 TYR CE2 CZ sing Y N 405 TYR CE2 HE2 sing N N 406 TYR CZ OH sing N N 407 TYR OH HH sing N N 408 TYR OXT HXT sing N N 409 VAL N CA sing N N 410 VAL N H sing N N 411 VAL N H2 sing N N 412 VAL CA C sing N N 413 VAL CA CB sing N N 414 VAL CA HA sing N N 415 VAL C O doub N N 416 VAL C OXT sing N N 417 VAL CB CG1 sing N N 418 VAL CB CG2 sing N N 419 VAL CB HB sing N N 420 VAL CG1 HG11 sing N N 421 VAL CG1 HG12 sing N N 422 VAL CG1 HG13 sing N N 423 VAL CG2 HG21 sing N N 424 VAL CG2 HG22 sing N N 425 VAL CG2 HG23 sing N N 426 VAL OXT HXT sing N N 427 # _atom_sites.entry_id 4DSO _atom_sites.fract_transf_matrix[1][1] 0.012599 _atom_sites.fract_transf_matrix[1][2] 0.007274 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014548 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012862 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_