HEADER BIOSYNTHETIC PROTEIN 22-FEB-12 4DUN TITLE 1.76A X-RAY CRYSTAL STRUCTURE OF A PUTATIVE PHENAZINE BIOSYNTHESIS TITLE 2 PHZC/PHZF PROTEIN FROM CLOSTRIDIUM DIFFICILE (STRAIN 630) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE PHENAZINE BIOSYNTHESIS PHZC/PHZF PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM DIFFICILE; SOURCE 3 ORGANISM_TAXID: 272563; SOURCE 4 STRAIN: 630; SOURCE 5 GENE: CD1761, CD630_17610; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.S.BRUNZELLE,W.WAWRZAK,M.KUDRITSKA,W.F.ANDERSON,A.SAVCHENKO,CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 2 13-SEP-23 4DUN 1 REMARK SEQADV REVDAT 1 14-MAR-12 4DUN 0 JRNL AUTH J.S.BRUNZELLE,W.WAWRZAK,M.KUDRITSKA,W.F.ANDERSON, JRNL AUTH 2 A.SAVCHENKO,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS JRNL AUTH 3 DISEASES (CSGID) JRNL TITL 1.76A X-RAY CRYSTAL STRUCTURE OF A PUTATIVE PHENAZINE JRNL TITL 2 BIOSYNTHESIS PHZC/PHZF PROTEIN FROM CLOSTRIDIUM DIFFICILE JRNL TITL 3 (STRAIN 630) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 32172 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1630 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 16 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.82 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2927 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2054 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2782 REMARK 3 BIN R VALUE (WORKING SET) : 0.2031 REMARK 3 BIN FREE R VALUE : 0.2491 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.95 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 145 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2041 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 370 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.68 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.28680 REMARK 3 B22 (A**2) : 0.28680 REMARK 3 B33 (A**2) : -0.57370 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.183 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2230 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3040 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1039 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 62 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 322 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2204 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 294 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2862 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.09 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.11 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.55 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|1 - 24} REMARK 3 ORIGIN FOR THE GROUP (A): 10.9490 36.7604 63.8394 REMARK 3 T TENSOR REMARK 3 T11: -0.0629 T22: -0.0572 REMARK 3 T33: -0.0637 T12: 0.0256 REMARK 3 T13: 0.0094 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 1.8098 L22: 0.6892 REMARK 3 L33: 0.3966 L12: 0.1234 REMARK 3 L13: 0.7576 L23: 0.4693 REMARK 3 S TENSOR REMARK 3 S11: -0.0785 S12: -0.0731 S13: 0.1441 REMARK 3 S21: -0.0434 S22: 0.0046 S23: -0.1258 REMARK 3 S31: -0.1053 S32: -0.0540 S33: 0.0739 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|25 - 35} REMARK 3 ORIGIN FOR THE GROUP (A): 23.7669 29.1925 51.1958 REMARK 3 T TENSOR REMARK 3 T11: 0.0353 T22: 0.0848 REMARK 3 T33: -0.0052 T12: 0.0068 REMARK 3 T13: 0.0159 T23: 0.0103 REMARK 3 L TENSOR REMARK 3 L11: 3.4739 L22: 0.7714 REMARK 3 L33: 2.8182 L12: -0.3781 REMARK 3 L13: -2.4577 L23: 1.2302 REMARK 3 S TENSOR REMARK 3 S11: -0.0380 S12: 0.2649 S13: 0.0829 REMARK 3 S21: -0.1191 S22: -0.0109 S23: -0.0310 REMARK 3 S31: -0.1184 S32: 0.1729 S33: 0.0489 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {A|36 - 54} REMARK 3 ORIGIN FOR THE GROUP (A): 17.2612 31.9510 56.0585 REMARK 3 T TENSOR REMARK 3 T11: 0.0210 T22: 0.0385 REMARK 3 T33: 0.0273 T12: 0.0108 REMARK 3 T13: 0.0412 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 3.3296 L22: 2.0293 REMARK 3 L33: 2.5692 L12: 0.7440 REMARK 3 L13: -0.7283 L23: -1.0835 REMARK 3 S TENSOR REMARK 3 S11: 0.0078 S12: 0.3404 S13: 0.2459 REMARK 3 S21: -0.2106 S22: 0.0294 S23: -0.1299 REMARK 3 S31: 0.0557 S32: 0.0183 S33: -0.0371 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {A|55 - 88} REMARK 3 ORIGIN FOR THE GROUP (A): 11.3543 36.7112 54.4799 REMARK 3 T TENSOR REMARK 3 T11: -0.0514 T22: -0.0418 REMARK 3 T33: -0.0635 T12: 0.0094 REMARK 3 T13: 0.0233 T23: -0.0110 REMARK 3 L TENSOR REMARK 3 L11: 1.3006 L22: 2.6284 REMARK 3 L33: 1.3433 L12: -0.9993 REMARK 3 L13: 0.0670 L23: 0.1816 REMARK 3 S TENSOR REMARK 3 S11: -0.0483 S12: 0.0473 S13: 0.1211 REMARK 3 S21: 0.0288 S22: -0.0264 S23: -0.1640 REMARK 3 S31: -0.0586 S32: 0.0240 S33: 0.0747 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: {A|89 - 114} REMARK 3 ORIGIN FOR THE GROUP (A): 3.4040 41.4384 50.3394 REMARK 3 T TENSOR REMARK 3 T11: -0.0048 T22: -0.0300 REMARK 3 T33: 0.0068 T12: 0.0181 REMARK 3 T13: 0.0055 T23: -0.0248 REMARK 3 L TENSOR REMARK 3 L11: 2.5436 L22: 0.6823 REMARK 3 L33: 0.8225 L12: -1.2907 REMARK 3 L13: -0.2032 L23: -0.6538 REMARK 3 S TENSOR REMARK 3 S11: 0.1095 S12: 0.1864 S13: 0.0916 REMARK 3 S21: -0.1004 S22: -0.1482 S23: -0.0012 REMARK 3 S31: -0.1443 S32: -0.1264 S33: 0.0387 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: {A|115 - 126} REMARK 3 ORIGIN FOR THE GROUP (A): -16.6622 19.2045 52.1205 REMARK 3 T TENSOR REMARK 3 T11: 0.0223 T22: -0.0098 REMARK 3 T33: -0.0135 T12: -0.0882 REMARK 3 T13: 0.0022 T23: -0.0265 REMARK 3 L TENSOR REMARK 3 L11: 1.5575 L22: 0.9148 REMARK 3 L33: 1.1500 L12: -0.1061 REMARK 3 L13: 0.7057 L23: 1.1130 REMARK 3 S TENSOR REMARK 3 S11: 0.0763 S12: 0.1623 S13: -0.3166 REMARK 3 S21: -0.0701 S22: -0.0687 S23: -0.0185 REMARK 3 S31: 0.3029 S32: -0.3251 S33: -0.0076 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: {A|127 - 148} REMARK 3 ORIGIN FOR THE GROUP (A): -14.5309 18.6097 58.6285 REMARK 3 T TENSOR REMARK 3 T11: -0.0357 T22: -0.0508 REMARK 3 T33: -0.0103 T12: -0.0390 REMARK 3 T13: 0.0064 T23: 0.0118 REMARK 3 L TENSOR REMARK 3 L11: 3.6960 L22: 0.1546 REMARK 3 L33: 2.2669 L12: 0.3207 REMARK 3 L13: 0.6152 L23: 0.3660 REMARK 3 S TENSOR REMARK 3 S11: -0.0446 S12: -0.0529 S13: -0.4026 REMARK 3 S21: -0.0063 S22: 0.1065 S23: 0.0297 REMARK 3 S31: 0.3916 S32: -0.1265 S33: -0.0619 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: {A|149 - 181} REMARK 3 ORIGIN FOR THE GROUP (A): -9.5959 20.0709 64.3574 REMARK 3 T TENSOR REMARK 3 T11: -0.0320 T22: -0.0141 REMARK 3 T33: -0.0037 T12: -0.0284 REMARK 3 T13: 0.0239 T23: 0.0156 REMARK 3 L TENSOR REMARK 3 L11: 2.6940 L22: 3.2198 REMARK 3 L33: 3.8741 L12: -0.2181 REMARK 3 L13: -1.0688 L23: -0.1599 REMARK 3 S TENSOR REMARK 3 S11: -0.0374 S12: -0.1247 S13: -0.4404 REMARK 3 S21: -0.0471 S22: -0.0623 S23: -0.0723 REMARK 3 S31: 0.4216 S32: 0.0336 S33: 0.0997 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: {A|182 - 212} REMARK 3 ORIGIN FOR THE GROUP (A): -7.0515 27.6146 60.1746 REMARK 3 T TENSOR REMARK 3 T11: -0.0381 T22: -0.0326 REMARK 3 T33: -0.0768 T12: -0.0111 REMARK 3 T13: 0.0191 T23: -0.0132 REMARK 3 L TENSOR REMARK 3 L11: 3.2348 L22: 1.5909 REMARK 3 L33: 1.9257 L12: 0.2212 REMARK 3 L13: 0.2817 L23: -1.1952 REMARK 3 S TENSOR REMARK 3 S11: -0.0385 S12: -0.0070 S13: -0.1547 REMARK 3 S21: -0.0565 S22: 0.0122 S23: -0.0565 REMARK 3 S31: 0.1077 S32: 0.0191 S33: 0.0264 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: {A|213 - 237} REMARK 3 ORIGIN FOR THE GROUP (A): -11.0495 37.1238 60.3797 REMARK 3 T TENSOR REMARK 3 T11: -0.0435 T22: -0.0098 REMARK 3 T33: -0.0409 T12: 0.0046 REMARK 3 T13: 0.0218 T23: -0.0158 REMARK 3 L TENSOR REMARK 3 L11: 2.1723 L22: 0.7309 REMARK 3 L33: 1.8789 L12: 0.7128 REMARK 3 L13: -0.5187 L23: -0.2780 REMARK 3 S TENSOR REMARK 3 S11: 0.0193 S12: -0.0650 S13: 0.1148 REMARK 3 S21: 0.0336 S22: 0.0861 S23: 0.2421 REMARK 3 S31: -0.1245 S32: -0.2693 S33: -0.1054 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: {A|238 - 258} REMARK 3 ORIGIN FOR THE GROUP (A): 7.9236 38.9521 58.9779 REMARK 3 T TENSOR REMARK 3 T11: 0.0317 T22: -0.0408 REMARK 3 T33: 0.0158 T12: -0.0177 REMARK 3 T13: 0.0146 T23: -0.0175 REMARK 3 L TENSOR REMARK 3 L11: 6.5953 L22: 0.8417 REMARK 3 L33: 2.4932 L12: 0.0152 REMARK 3 L13: 3.0638 L23: -0.2903 REMARK 3 S TENSOR REMARK 3 S11: -0.1130 S12: 0.0453 S13: 0.1201 REMARK 3 S21: -0.1011 S22: 0.0513 S23: -0.0792 REMARK 3 S31: -0.0139 S32: 0.0051 S33: 0.0616 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4DUN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000070803. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : SINGLE DIAMOND REMARK 200 OPTICS : BE LENS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS, XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32236 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.760 REMARK 200 RESOLUTION RANGE LOW (A) : 51.040 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.68400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER, PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 1S7J REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350 20% W/V, NA SULFATE 0.2M, BIS REMARK 280 -TRIS 0.1M PH5.5, 2% MPD, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.04000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 90.08000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 90.08000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 45.04000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -57.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 135.12000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 540 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ASP A 259 REMARK 465 ILE A 260 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 69 86.64 -163.18 REMARK 500 SER A 141 -142.09 -157.25 REMARK 500 SER A 141 -145.57 -156.54 REMARK 500 ASP A 239 44.80 -92.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 303 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 71 NE2 REMARK 620 2 BTB A 302 O3 95.7 REMARK 620 3 BTB A 302 O6 95.3 93.2 REMARK 620 4 BTB A 302 O8 100.6 162.4 91.6 REMARK 620 5 BTB A 302 O4 97.8 82.2 166.4 89.3 REMARK 620 6 BTB A 302 N 177.2 81.5 85.6 82.0 81.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BTB A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BTB A 304 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP05108 RELATED DB: TARGETTRACK DBREF 4DUN A 1 260 UNP Q186X0 Q186X0_CLOD6 1 260 SEQADV 4DUN SER A -2 UNP Q186X0 EXPRESSION TAG SEQADV 4DUN ASN A -1 UNP Q186X0 EXPRESSION TAG SEQADV 4DUN ALA A 0 UNP Q186X0 EXPRESSION TAG SEQRES 1 A 263 SER ASN ALA MET GLU TYR TYR ILE VAL ASP SER PHE ALA SEQRES 2 A 263 THR LYS LEU PHE LYS GLY ASN PRO ALA GLY VAL CYS VAL SEQRES 3 A 263 LEU ASP ARG ARG ILE PRO LEU GLU LEU MET GLN LYS ILE SEQRES 4 A 263 ALA GLU GLU ASN ASN LEU PRO GLU THR ALA PHE VAL VAL SEQRES 5 A 263 LYS GLY LYS GLY ASN TYR GLU LEU ARG TRP PHE THR PRO SEQRES 6 A 263 LYS ALA GLU ILE ASP LEU CYS GLY HIS ALA THR LEU ALA SEQRES 7 A 263 ALA ALA TYR VAL ILE SER ASN PHE ILE ASP VAL ASN VAL SEQRES 8 A 263 LYS LYS ILE ASP PHE PHE THR GLN SER GLY LYS LEU GLU SEQRES 9 A 263 VAL THR ARG ASN GLY ASN LEU TYR GLU MET ILE PHE PRO SEQRES 10 A 263 GLU ILE MET PRO ILE GLU ILE GLU LEU SER PRO GLN GLN SEQRES 11 A 263 ALA ASN LEU ILE GLY CYS VAL PRO SER ASP VAL TYR SER SEQRES 12 A 263 SER ARG ASP LEU ILE LEU LEU LEU ASN SER GLU GLN GLU SEQRES 13 A 263 VAL ILE ASN TYR LYS PRO ASN TYR ALA GLN LEU ARG LYS SEQRES 14 A 263 LEU THR ASP TRP LEU GLY ILE ILE ILE THR ALA GLN GLY SEQRES 15 A 263 SER ASN THR ASP PHE VAL SER ARG TYR PHE CYS PRO GLU SEQRES 16 A 263 LEU ASP SER GLU ASP PRO VAL THR GLY SER SER HIS CYS SEQRES 17 A 263 ASN LEU ILE PRO TYR TRP SER GLU LYS LEU GLY LYS HIS SEQRES 18 A 263 LYS MET VAL ALA ALA GLN LEU SER ASN ARG GLY GLY ILE SEQRES 19 A 263 ILE GLN CYS GLU VAL LEU LYS ASP ASN THR VAL LYS ILE SEQRES 20 A 263 SER GLY GLU ALA VAL LEU PHE MET GLN GLY THR ILE LYS SEQRES 21 A 263 ILE ASP ILE HET SO4 A 301 5 HET BTB A 302 14 HET NI A 303 1 HET BTB A 304 14 HETNAM SO4 SULFATE ION HETNAM BTB 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL- HETNAM 2 BTB PROPANE-1,3-DIOL HETNAM NI NICKEL (II) ION HETSYN BTB BIS-TRIS BUFFER FORMUL 2 SO4 O4 S 2- FORMUL 3 BTB 2(C8 H19 N O5) FORMUL 4 NI NI 2+ FORMUL 6 HOH *370(H2 O) HELIX 1 1 PRO A 29 ASN A 41 1 13 HELIX 2 2 CYS A 69 ILE A 84 1 16 HELIX 3 3 SER A 124 ILE A 131 1 8 HELIX 4 4 SER A 150 TYR A 157 1 8 HELIX 5 5 ASN A 160 ARG A 165 1 6 HELIX 6 6 SER A 203 GLY A 216 1 14 SHEET 1 A10 GLU A 65 ILE A 66 0 SHEET 2 A10 ASN A 54 PHE A 60 -1 N TRP A 59 O ILE A 66 SHEET 3 A10 LYS A 90 THR A 95 1 O PHE A 94 N TYR A 55 SHEET 4 A10 GLY A 98 ASN A 105 -1 O VAL A 102 N ILE A 91 SHEET 5 A10 LEU A 108 PRO A 114 -1 O GLU A 110 N THR A 103 SHEET 6 A10 THR A 241 GLY A 246 -1 O GLY A 246 N TYR A 109 SHEET 7 A10 GLY A 230 VAL A 236 -1 N GLU A 235 O LYS A 243 SHEET 8 A10 LYS A 219 GLN A 224 -1 N MET A 220 O CYS A 234 SHEET 9 A10 PHE A 184 CYS A 190 1 N PHE A 184 O ALA A 223 SHEET 10 A10 SER A 195 ASP A 197 -1 O SER A 195 N CYS A 190 SHEET 1 B16 ILE A 119 GLU A 120 0 SHEET 2 B16 ASP A 137 SER A 140 -1 O SER A 140 N ILE A 119 SHEET 3 B16 LEU A 144 LEU A 147 -1 O ILE A 145 N TYR A 139 SHEET 4 B16 ILE A 173 GLN A 178 1 O ILE A 174 N LEU A 144 SHEET 5 B16 PHE A 184 CYS A 190 -1 O PHE A 189 N ILE A 173 SHEET 6 B16 LYS A 219 GLN A 224 1 O ALA A 223 N PHE A 184 SHEET 7 B16 GLY A 230 VAL A 236 -1 O CYS A 234 N MET A 220 SHEET 8 B16 THR A 241 GLY A 246 -1 O LYS A 243 N GLU A 235 SHEET 9 B16 LEU A 108 PRO A 114 -1 N TYR A 109 O GLY A 246 SHEET 10 B16 GLY A 98 ASN A 105 -1 N THR A 103 O GLU A 110 SHEET 11 B16 LYS A 90 THR A 95 -1 N ILE A 91 O VAL A 102 SHEET 12 B16 ASN A 54 PHE A 60 1 N TYR A 55 O PHE A 94 SHEET 13 B16 GLU A 44 GLY A 51 -1 N PHE A 47 O ARG A 58 SHEET 14 B16 ASN A 17 LEU A 24 1 N CYS A 22 O ALA A 46 SHEET 15 B16 MET A 1 SER A 8 -1 N VAL A 6 O ALA A 19 SHEET 16 B16 ALA A 248 ILE A 256 -1 O GLY A 254 N TYR A 3 LINK NE2 HIS A 71 NI NI A 303 1555 1555 2.04 LINK O3 BTB A 302 NI NI A 303 1555 1555 2.12 LINK O6 BTB A 302 NI NI A 303 1555 1555 2.13 LINK O8 BTB A 302 NI NI A 303 1555 1555 2.13 LINK O4 BTB A 302 NI NI A 303 1555 1555 2.14 LINK N BTB A 302 NI NI A 303 1555 1555 2.36 SITE 1 AC1 8 GLY A 70 HIS A 71 PHE A 113 THR A 200 SITE 2 AC1 8 GLY A 201 SER A 202 BTB A 302 HOH A 482 SITE 1 AC2 11 GLU A 44 ILE A 66 CYS A 69 HIS A 71 SITE 2 AC2 11 TYR A 188 ASP A 197 THR A 200 SO4 A 301 SITE 3 AC2 11 NI A 303 HOH A 506 HOH A 560 SITE 1 AC3 2 HIS A 71 BTB A 302 SITE 1 AC4 4 ASP A 67 GLN A 96 MET A 117 GLU A 213 CRYST1 63.650 63.650 135.120 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015711 0.009071 0.000000 0.00000 SCALE2 0.000000 0.018141 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007401 0.00000