HEADER OXIDOREDUCTASE 23-FEB-12 4DVC TITLE STRUCTURAL AND FUNCTIONAL STUDIES OF TCPG, THE VIBRIO CHOLERAE DSBA TITLE 2 DISULFIDE-FORMING PROTEIN REQUIRED FOR PILUS AND CHOLERA TOXIN TITLE 3 PRODUCTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOL:DISULFIDE INTERCHANGE PROTEIN DSBA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 19-200; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 243277; SOURCE 4 STRAIN: SEROTYPE O1 (ATCC 39315 / EL TOR INABA N16961); SOURCE 5 GENE: TPCG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-21A KEYWDS CHOLERA, PILUS ASSEMBLY, OXIDOREDUCTASE, THIOREDOXIN FOLD, DSBA-LIKE, KEYWDS 2 DISULFIDE BOND, DSBB EXPDTA X-RAY DIFFRACTION AUTHOR P.M.WALDEN,J.L.MARTIN REVDAT 1 31-OCT-12 4DVC 0 JRNL AUTH P.M.WALDEN,B.HERAS,K.-E.CHEN,M.A.HALILI,K.RIMMER,P.SHARMA, JRNL AUTH 2 M.J.SCANLON,J.L.MARTIN JRNL TITL THE 1.2 A RESOLUTION CRYSTAL STRUCTURE OF TCPG, THE VIBRIO JRNL TITL 2 CHOLERAE DSBA DISULFIDE-FORMING PROTEIN REQUIRED FOR PILUS JRNL TITL 3 AND CHOLERA-TOXIN PRODUCTION JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 68 1290 2012 JRNL REFN ISSN 0907-4449 JRNL PMID 22993083 JRNL DOI 10.1107/S0907444912026388 REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1031) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 56644 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.120 REMARK 3 R VALUE (WORKING SET) : 0.119 REMARK 3 FREE R VALUE : 0.139 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.530 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.1430 - 2.8900 0.99 4083 149 0.1422 0.1552 REMARK 3 2 2.8900 - 2.2941 1.00 3976 146 0.1291 0.1469 REMARK 3 3 2.2941 - 2.0042 1.00 3930 144 0.1075 0.1199 REMARK 3 4 2.0042 - 1.8209 1.00 3927 144 0.1011 0.1229 REMARK 3 5 1.8209 - 1.6904 1.00 3906 143 0.0905 0.1236 REMARK 3 6 1.6904 - 1.5908 1.00 3912 142 0.0812 0.1116 REMARK 3 7 1.5908 - 1.5111 1.00 3894 143 0.0834 0.1092 REMARK 3 8 1.5111 - 1.4453 1.00 3906 143 0.0905 0.1114 REMARK 3 9 1.4453 - 1.3897 1.00 3870 142 0.0993 0.1446 REMARK 3 10 1.3897 - 1.3417 1.00 3869 142 0.1072 0.1405 REMARK 3 11 1.3417 - 1.2998 1.00 3854 141 0.1206 0.1381 REMARK 3 12 1.2998 - 1.2626 1.00 3898 142 0.1392 0.1727 REMARK 3 13 1.2626 - 1.2294 1.00 3887 142 0.1582 0.1899 REMARK 3 14 1.2294 - 1.1994 0.97 3732 137 0.1941 0.1939 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.090 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 11.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.96600 REMARK 3 B22 (A**2) : -1.36270 REMARK 3 B33 (A**2) : -1.60330 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1552 REMARK 3 ANGLE : 1.205 2107 REMARK 3 CHIRALITY : 0.071 222 REMARK 3 PLANARITY : 0.007 281 REMARK 3 DIHEDRAL : 14.753 582 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4DVC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-MAR-12. REMARK 100 THE RCSB ID CODE IS RCSB070828. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9536 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSSED SI REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56644 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 64.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 14.000 REMARK 200 R MERGE (I) : 0.10300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 12.90 REMARK 200 R MERGE FOR SHELL (I) : 0.10300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, MES, PH 6.4, HANGING DROP, REMARK 280 TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.13150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 32.13150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 31.32700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.76000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 31.32700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.76000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 32.13150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 31.32700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 44.76000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 32.13150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 31.32700 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 44.76000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 304 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 413 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 464 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 498 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 546 LIES ON A SPECIAL POSITION. REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 4 CD CE NZ REMARK 480 LYS A 13 CD CE NZ REMARK 480 LYS A 52 CE NZ REMARK 480 LYS A 98 CD CE NZ REMARK 480 LYS A 119 NZ REMARK 480 GLN A 162 CG CD OE1 NE2 REMARK 480 LYS A 181 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD22 ASN A 125 O HOH A 452 1.43 REMARK 500 O HOH A 547 O HOH A 579 1.79 REMARK 500 O HOH A 501 O HOH A 502 1.99 REMARK 500 OE2 GLU A 82 O HOH A 555 2.04 REMARK 500 O HOH A 352 O HOH A 488 2.10 REMARK 500 O HOH A 411 O HOH A 552 2.13 REMARK 500 O HOH A 344 O HOH A 443 2.15 REMARK 500 O HOH A 369 O HOH A 552 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 567 O HOH A 569 4555 1.69 REMARK 500 O HOH A 443 O HOH A 537 6445 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 30 CA - CB - SG ANGL. DEV. = 8.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 155 -11.28 68.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 534 DISTANCE = 5.31 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 203 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS SEQUENCE CONFLICT IS BASED ON REFERENCE 1 OF DATABASE REMARK 999 UNIPROTKB/SWISS-PROT P32557 (DSBA_VIBCH). DBREF 4DVC A 0 181 UNP P32557 DSBA_VIBCH 19 200 SEQADV 4DVC SER A -2 UNP P32557 EXPRESSION TAG SEQADV 4DVC ASN A -1 UNP P32557 EXPRESSION TAG SEQADV 4DVC SER A 23 UNP P32557 ASN 42 SEE REMARK 999 SEQADV 4DVC HIS A 134 UNP P32557 ARG 153 ENGINEERED MUTATION SEQADV 4DVC ALA A 164 UNP P32557 VAL 183 ENGINEERED MUTATION SEQRES 1 A 184 SER ASN ALA ALA GLN PHE LYS GLU GLY GLU HIS TYR GLN SEQRES 2 A 184 VAL LEU LYS THR PRO ALA SER SER SER PRO VAL VAL SER SEQRES 3 A 184 GLU PHE PHE SER PHE TYR CYS PRO HIS CYS ASN THR PHE SEQRES 4 A 184 GLU PRO ILE ILE ALA GLN LEU LYS GLN GLN LEU PRO GLU SEQRES 5 A 184 GLY ALA LYS PHE GLN LYS ASN HIS VAL SER PHE MET GLY SEQRES 6 A 184 GLY ASN MET GLY GLN ALA MET SER LYS ALA TYR ALA THR SEQRES 7 A 184 MET ILE ALA LEU GLU VAL GLU ASP LYS MET VAL PRO VAL SEQRES 8 A 184 MET PHE ASN ARG ILE HIS THR LEU ARG LYS PRO PRO LYS SEQRES 9 A 184 ASP GLU GLN GLU LEU ARG GLN ILE PHE LEU ASP GLU GLY SEQRES 10 A 184 ILE ASP ALA ALA LYS PHE ASP ALA ALA TYR ASN GLY PHE SEQRES 11 A 184 ALA VAL ASP SER MET VAL HIS ARG PHE ASP LYS GLN PHE SEQRES 12 A 184 GLN ASP SER GLY LEU THR GLY VAL PRO ALA VAL VAL VAL SEQRES 13 A 184 ASN ASN ARG TYR LEU VAL GLN GLY GLN SER ALA LYS SER SEQRES 14 A 184 LEU ASP GLU TYR PHE ASP LEU VAL ASN TYR LEU LEU THR SEQRES 15 A 184 LEU LYS HET DMS A 201 10 HET DMS A 202 10 HET SO4 A 203 5 HETNAM DMS DIMETHYL SULFOXIDE HETNAM SO4 SULFATE ION FORMUL 2 DMS 2(C2 H6 O S) FORMUL 4 SO4 O4 S 2- FORMUL 5 HOH *284(H2 O) HELIX 1 1 CYS A 30 GLN A 46 1 17 HELIX 2 2 GLY A 62 ASN A 64 5 3 HELIX 3 3 MET A 65 LEU A 79 1 15 HELIX 4 4 VAL A 81 THR A 95 1 15 HELIX 5 5 ASP A 102 ASP A 112 1 11 HELIX 6 6 ASP A 116 ASN A 125 1 10 HELIX 7 7 GLY A 126 GLY A 144 1 19 HELIX 8 8 GLY A 161 ALA A 164 5 4 HELIX 9 9 SER A 166 LEU A 178 1 13 SHEET 1 A 5 TYR A 9 VAL A 11 0 SHEET 2 A 5 TYR A 157 VAL A 159 -1 O LEU A 158 N GLN A 10 SHEET 3 A 5 ALA A 150 VAL A 153 -1 N VAL A 153 O TYR A 157 SHEET 4 A 5 VAL A 21 PHE A 26 -1 N SER A 23 O VAL A 152 SHEET 5 A 5 LYS A 52 HIS A 57 1 O ASN A 56 N GLU A 24 SSBOND 1 CYS A 30 CYS A 33 1555 1555 2.07 CISPEP 1 VAL A 148 PRO A 149 0 -5.83 SITE 1 AC1 5 GLU A 37 ASP A 83 VAL A 86 HOH A 541 SITE 2 AC1 5 HOH A 558 SITE 1 AC2 7 SER A 17 SER A 18 SER A 19 PRO A 20 SITE 2 AC2 7 ASN A 154 LEU A 178 LEU A 180 SITE 1 AC3 5 SER A -2 ASN A -1 ILE A 115 ASP A 116 SITE 2 AC3 5 LYS A 119 CRYST1 62.654 89.520 64.263 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015961 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011171 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015561 0.00000