HEADER TRANSPORT PROTEIN 23-FEB-12 4DVE TITLE CRYSTAL STRUCTURE AT 2.1 A OF THE S-COMPONENT FOR BIOTIN FROM AN ECF- TITLE 2 TYPE ABC TRANSPORTER COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIOTIN TRANSPORTER BIOY; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: BIOTIN ECF TRANSPORTER S COMPONENT BIOY; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOCOCCUS LACTIS SUBSP. CREMORIS; SOURCE 3 ORGANISM_TAXID: 416870; SOURCE 4 STRAIN: MG1363; SOURCE 5 GENE: BIOY, LLMG_1964; SOURCE 6 EXPRESSION_SYSTEM: LACTOCOCCUS LACTIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 1358; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: NZ9000 KEYWDS ECF-TRANSPORT, LIGAND-BINDING DOMAIN, BIOTIN BINDING, MEMBRANE, KEYWDS 2 TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.P.-A.BERNTSSON,J.TER BEEK,M.MAJSNEROWSKA,R.DUURKENS,P.PURI, AUTHOR 2 B.POOLMAN,D.J.SLOTBOOM REVDAT 4 20-NOV-24 4DVE 1 HETSYN REVDAT 3 29-JUL-20 4DVE 1 COMPND REMARK SEQADV HETNAM REVDAT 3 2 1 LINK SITE REVDAT 2 17-OCT-12 4DVE 1 JRNL REVDAT 1 29-AUG-12 4DVE 0 JRNL AUTH R.P.BERNTSSON,J.TER BEEK,M.MAJSNEROWSKA,R.H.DUURKENS,P.PURI, JRNL AUTH 2 B.POOLMAN,D.J.SLOTBOOM JRNL TITL STRUCTURAL DIVERGENCE OF PARALOGOUS S COMPONENTS FROM JRNL TITL 2 ECF-TYPE ABC TRANSPORTERS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 109 13990 2012 JRNL REFN ISSN 0027-8424 JRNL PMID 22891302 JRNL DOI 10.1073/PNAS.1203219109 REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.36 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 49743 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2488 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.09 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2933 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.35 REMARK 3 BIN R VALUE (WORKING SET) : 0.2110 REMARK 3 BIN FREE R VALUE SET COUNT : 154 REMARK 3 BIN FREE R VALUE : 0.2310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4329 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 174 REMARK 3 SOLVENT ATOMS : 116 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.97 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.40000 REMARK 3 B22 (A**2) : 2.93000 REMARK 3 B33 (A**2) : -1.52000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.28000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.159 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.136 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.068 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.159 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4624 ; 0.011 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3203 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6263 ; 1.567 ; 2.028 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7863 ; 1.322 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 565 ; 5.206 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 138 ;34.404 ;22.391 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 691 ;14.967 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;14.034 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 756 ; 0.158 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4854 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 979 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 188 5 REMARK 3 1 B 1 B 188 5 REMARK 3 1 C 1 C 188 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1086 ; 0.190 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 B (A): 1086 ; 0.170 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 C (A): 1086 ; 0.180 ; 0.500 REMARK 3 LOOSE POSITIONAL 1 A (A): 1347 ; 0.660 ; 5.000 REMARK 3 LOOSE POSITIONAL 1 B (A): 1347 ; 0.600 ; 5.000 REMARK 3 LOOSE POSITIONAL 1 C (A): 1347 ; 0.660 ; 5.000 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1086 ; 3.030 ; 2.000 REMARK 3 MEDIUM THERMAL 1 B (A**2): 1086 ; 3.020 ; 2.000 REMARK 3 MEDIUM THERMAL 1 C (A**2): 1086 ; 4.700 ; 2.000 REMARK 3 LOOSE THERMAL 1 A (A**2): 1347 ; 3.840 ;10.000 REMARK 3 LOOSE THERMAL 1 B (A**2): 1347 ; 3.540 ;10.000 REMARK 3 LOOSE THERMAL 1 C (A**2): 1347 ; 5.500 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 188 REMARK 3 ORIGIN FOR THE GROUP (A): 34.9617 -43.4359 69.8979 REMARK 3 T TENSOR REMARK 3 T11: 0.0466 T22: 0.0628 REMARK 3 T33: 0.0687 T12: 0.0453 REMARK 3 T13: 0.0070 T23: 0.0194 REMARK 3 L TENSOR REMARK 3 L11: 3.4916 L22: 1.4983 REMARK 3 L33: 1.8702 L12: -1.3684 REMARK 3 L13: 0.3535 L23: -0.3935 REMARK 3 S TENSOR REMARK 3 S11: -0.0438 S12: -0.1011 S13: -0.0085 REMARK 3 S21: 0.0419 S22: 0.0519 S23: 0.0548 REMARK 3 S31: -0.1648 S32: -0.0207 S33: -0.0081 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 188 REMARK 3 ORIGIN FOR THE GROUP (A): 36.7855 -15.9334 14.1918 REMARK 3 T TENSOR REMARK 3 T11: 0.0655 T22: 0.0402 REMARK 3 T33: 0.0681 T12: -0.0351 REMARK 3 T13: -0.0021 T23: 0.0169 REMARK 3 L TENSOR REMARK 3 L11: 3.2476 L22: 1.5680 REMARK 3 L33: 1.8495 L12: 1.5188 REMARK 3 L13: -0.8484 L23: -0.2572 REMARK 3 S TENSOR REMARK 3 S11: 0.0435 S12: -0.2032 S13: -0.1101 REMARK 3 S21: 0.0541 S22: -0.0728 S23: -0.0645 REMARK 3 S31: 0.1035 S32: 0.1059 S33: 0.0293 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 188 REMARK 3 ORIGIN FOR THE GROUP (A): 27.8339 -29.3090 41.2024 REMARK 3 T TENSOR REMARK 3 T11: 0.0510 T22: 0.0508 REMARK 3 T33: 0.0248 T12: 0.0023 REMARK 3 T13: 0.0010 T23: 0.0303 REMARK 3 L TENSOR REMARK 3 L11: 1.8454 L22: 3.4998 REMARK 3 L33: 4.0734 L12: 0.2715 REMARK 3 L13: 0.3694 L23: -1.9392 REMARK 3 S TENSOR REMARK 3 S11: 0.0007 S12: 0.1404 S13: -0.0006 REMARK 3 S21: 0.0687 S22: 0.1245 S23: 0.1524 REMARK 3 S31: 0.0604 S32: -0.0680 S33: -0.1252 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS; U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 4DVE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000070830. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97935 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 2.090 REMARK 200 RESOLUTION RANGE LOW (A) : 48.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.43800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.510 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05-0.2 MM CACL2, 45-50% PEG400, PH REMARK 280 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 44.91250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.69200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 44.91250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.69200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 49230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 89.82500 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 MSE B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 MSE C -9 REMARK 465 HIS C -8 REMARK 465 HIS C -7 REMARK 465 HIS C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 HIS C -1 REMARK 465 ALA C 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR B 114 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 178 NE - CZ - NH1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG A 178 NE - CZ - NH2 ANGL. DEV. = -6.1 DEGREES REMARK 500 ARG C 178 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 35 46.92 -87.76 REMARK 500 THR A 76 128.28 -39.97 REMARK 500 PRO B 35 47.80 -83.14 REMARK 500 LYS B 55 -60.25 -90.44 REMARK 500 GLN B 116 32.52 -98.81 REMARK 500 PRO C 35 47.91 -86.64 REMARK 500 GLN C 116 36.15 -99.74 REMARK 500 REMARK 500 REMARK: NULL DBREF 4DVE A 2 188 UNP A2RMJ9 BIOY_LACLM 2 188 DBREF 4DVE B 2 188 UNP A2RMJ9 BIOY_LACLM 2 188 DBREF 4DVE C 2 188 UNP A2RMJ9 BIOY_LACLM 2 188 SEQADV 4DVE MSE A -9 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS A -8 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS A -7 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS A -6 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS A -5 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS A -4 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS A -3 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS A -2 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS A -1 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE ALA A 0 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE MSE A 1 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE MSE B -9 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS B -8 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS B -7 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS B -6 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS B -5 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS B -4 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS B -3 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS B -2 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS B -1 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE ALA B 0 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE MSE B 1 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE MSE C -9 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS C -8 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS C -7 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS C -6 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS C -5 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS C -4 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS C -3 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS C -2 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE HIS C -1 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE ALA C 0 UNP A2RMJ9 EXPRESSION TAG SEQADV 4DVE MSE C 1 UNP A2RMJ9 EXPRESSION TAG SEQRES 1 A 198 MSE HIS HIS HIS HIS HIS HIS HIS HIS ALA MSE THR ASN SEQRES 2 A 198 ASN GLN LYS VAL LYS THR LEU THR TYR SER ALA PHE MSE SEQRES 3 A 198 THR ALA PHE ILE ILE ILE LEU GLY PHE LEU PRO GLY ILE SEQRES 4 A 198 PRO ILE GLY PHE ILE PRO VAL PRO ILE ILE LEU GLN ASN SEQRES 5 A 198 MSE GLY ILE MSE MSE ALA GLY GLY LEU LEU GLY PRO LYS SEQRES 6 A 198 TYR GLY THR ILE SER VAL GLY ALA PHE LEU ALA LEU ALA SEQRES 7 A 198 LEU ILE GLY LEU PRO VAL LEU THR GLY GLY ASN GLY GLY SEQRES 8 A 198 ALA ALA SER PHE LEU GLY PRO SER GLY GLY TYR ARG ILE SEQRES 9 A 198 ALA TRP LEU PHE THR PRO PHE LEU ILE GLY PHE PHE LEU SEQRES 10 A 198 LYS LYS LEU LYS ILE THR THR SER GLN ASN TRP PHE GLY SEQRES 11 A 198 GLU LEU ILE ILE VAL LEU LEU PHE GLY VAL ILE PHE VAL SEQRES 12 A 198 ASP PHE VAL GLY ALA ILE TRP LEU SER PHE GLN SER ASN SEQRES 13 A 198 ILE PRO LEU LEU THR SER LEU ILE SER ASN LEU VAL PHE SEQRES 14 A 198 ILE PRO GLY ASP CYS ILE LYS ALA ILE LEU THR VAL VAL SEQRES 15 A 198 ILE VAL ARG ARG LEU ARG LYS GLN GLY GLY PHE GLU LEU SEQRES 16 A 198 TYR PHE ARG SEQRES 1 B 198 MSE HIS HIS HIS HIS HIS HIS HIS HIS ALA MSE THR ASN SEQRES 2 B 198 ASN GLN LYS VAL LYS THR LEU THR TYR SER ALA PHE MSE SEQRES 3 B 198 THR ALA PHE ILE ILE ILE LEU GLY PHE LEU PRO GLY ILE SEQRES 4 B 198 PRO ILE GLY PHE ILE PRO VAL PRO ILE ILE LEU GLN ASN SEQRES 5 B 198 MSE GLY ILE MSE MSE ALA GLY GLY LEU LEU GLY PRO LYS SEQRES 6 B 198 TYR GLY THR ILE SER VAL GLY ALA PHE LEU ALA LEU ALA SEQRES 7 B 198 LEU ILE GLY LEU PRO VAL LEU THR GLY GLY ASN GLY GLY SEQRES 8 B 198 ALA ALA SER PHE LEU GLY PRO SER GLY GLY TYR ARG ILE SEQRES 9 B 198 ALA TRP LEU PHE THR PRO PHE LEU ILE GLY PHE PHE LEU SEQRES 10 B 198 LYS LYS LEU LYS ILE THR THR SER GLN ASN TRP PHE GLY SEQRES 11 B 198 GLU LEU ILE ILE VAL LEU LEU PHE GLY VAL ILE PHE VAL SEQRES 12 B 198 ASP PHE VAL GLY ALA ILE TRP LEU SER PHE GLN SER ASN SEQRES 13 B 198 ILE PRO LEU LEU THR SER LEU ILE SER ASN LEU VAL PHE SEQRES 14 B 198 ILE PRO GLY ASP CYS ILE LYS ALA ILE LEU THR VAL VAL SEQRES 15 B 198 ILE VAL ARG ARG LEU ARG LYS GLN GLY GLY PHE GLU LEU SEQRES 16 B 198 TYR PHE ARG SEQRES 1 C 198 MSE HIS HIS HIS HIS HIS HIS HIS HIS ALA MSE THR ASN SEQRES 2 C 198 ASN GLN LYS VAL LYS THR LEU THR TYR SER ALA PHE MSE SEQRES 3 C 198 THR ALA PHE ILE ILE ILE LEU GLY PHE LEU PRO GLY ILE SEQRES 4 C 198 PRO ILE GLY PHE ILE PRO VAL PRO ILE ILE LEU GLN ASN SEQRES 5 C 198 MSE GLY ILE MSE MSE ALA GLY GLY LEU LEU GLY PRO LYS SEQRES 6 C 198 TYR GLY THR ILE SER VAL GLY ALA PHE LEU ALA LEU ALA SEQRES 7 C 198 LEU ILE GLY LEU PRO VAL LEU THR GLY GLY ASN GLY GLY SEQRES 8 C 198 ALA ALA SER PHE LEU GLY PRO SER GLY GLY TYR ARG ILE SEQRES 9 C 198 ALA TRP LEU PHE THR PRO PHE LEU ILE GLY PHE PHE LEU SEQRES 10 C 198 LYS LYS LEU LYS ILE THR THR SER GLN ASN TRP PHE GLY SEQRES 11 C 198 GLU LEU ILE ILE VAL LEU LEU PHE GLY VAL ILE PHE VAL SEQRES 12 C 198 ASP PHE VAL GLY ALA ILE TRP LEU SER PHE GLN SER ASN SEQRES 13 C 198 ILE PRO LEU LEU THR SER LEU ILE SER ASN LEU VAL PHE SEQRES 14 C 198 ILE PRO GLY ASP CYS ILE LYS ALA ILE LEU THR VAL VAL SEQRES 15 C 198 ILE VAL ARG ARG LEU ARG LYS GLN GLY GLY PHE GLU LEU SEQRES 16 C 198 TYR PHE ARG MODRES 4DVE MSE A 1 MET SELENOMETHIONINE MODRES 4DVE MSE A 16 MET SELENOMETHIONINE MODRES 4DVE MSE A 43 MET SELENOMETHIONINE MODRES 4DVE MSE A 46 MET SELENOMETHIONINE MODRES 4DVE MSE A 47 MET SELENOMETHIONINE MODRES 4DVE MSE B 1 MET SELENOMETHIONINE MODRES 4DVE MSE B 16 MET SELENOMETHIONINE MODRES 4DVE MSE B 43 MET SELENOMETHIONINE MODRES 4DVE MSE B 46 MET SELENOMETHIONINE MODRES 4DVE MSE B 47 MET SELENOMETHIONINE MODRES 4DVE MSE C 1 MET SELENOMETHIONINE MODRES 4DVE MSE C 16 MET SELENOMETHIONINE MODRES 4DVE MSE C 43 MET SELENOMETHIONINE MODRES 4DVE MSE C 46 MET SELENOMETHIONINE MODRES 4DVE MSE C 47 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 16 8 HET MSE A 43 8 HET MSE A 46 8 HET MSE A 47 8 HET MSE B 1 8 HET MSE B 16 8 HET MSE B 43 8 HET MSE B 46 8 HET MSE B 47 8 HET MSE C 1 8 HET MSE C 16 8 HET MSE C 43 8 HET MSE C 46 8 HET MSE C 47 8 HET BTN A 201 16 HET BNG A 202 21 HET BNG A 203 21 HET BNG A 204 21 HET BTN B 201 16 HET BNG B 202 21 HET BNG B 203 21 HET BTN C 201 16 HET BNG C 202 21 HETNAM MSE SELENOMETHIONINE HETNAM BTN BIOTIN HETNAM BNG NONYL BETA-D-GLUCOPYRANOSIDE HETSYN BNG BETA-NONYLGLUCOSIDE; NONYL BETA-D-GLUCOSIDE; NONYL D- HETSYN 2 BNG GLUCOSIDE; NONYL GLUCOSIDE FORMUL 1 MSE 15(C5 H11 N O2 SE) FORMUL 4 BTN 3(C10 H16 N2 O3 S) FORMUL 5 BNG 6(C15 H30 O6) FORMUL 13 HOH *116(H2 O) HELIX 1 1 THR A 2 GLY A 24 1 23 HELIX 2 2 GLN A 41 GLY A 71 1 31 HELIX 3 3 ALA A 82 GLY A 87 5 6 HELIX 4 4 SER A 89 LEU A 110 1 22 HELIX 5 5 LYS A 111 SER A 115 5 5 HELIX 6 6 ASN A 117 VAL A 130 1 14 HELIX 7 7 VAL A 130 ASN A 146 1 17 HELIX 8 8 PRO A 148 ASN A 156 1 9 HELIX 9 9 PHE A 159 GLN A 180 1 22 HELIX 10 10 PHE A 183 ARG A 188 5 6 HELIX 11 11 THR B 2 GLY B 24 1 23 HELIX 12 12 GLN B 41 ILE B 70 1 30 HELIX 13 13 ALA B 82 GLY B 87 5 6 HELIX 14 14 SER B 89 LEU B 110 1 22 HELIX 15 15 ASN B 117 VAL B 130 1 14 HELIX 16 16 VAL B 130 SER B 145 1 16 HELIX 17 17 PRO B 148 ASN B 156 1 9 HELIX 18 18 PHE B 159 GLN B 180 1 22 HELIX 19 19 GLY B 181 ARG B 188 5 8 HELIX 20 20 THR C 2 GLY C 24 1 23 HELIX 21 21 GLN C 41 GLY C 71 1 31 HELIX 22 22 ALA C 82 GLY C 87 5 6 HELIX 23 23 SER C 89 LEU C 110 1 22 HELIX 24 24 ASN C 117 VAL C 130 1 14 HELIX 25 25 VAL C 130 ASN C 146 1 17 HELIX 26 26 PRO C 148 LEU C 157 1 10 HELIX 27 27 PHE C 159 GLN C 180 1 22 HELIX 28 28 PHE C 183 ARG C 188 5 6 LINK C ALA A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N THR A 2 1555 1555 1.32 LINK C PHE A 15 N MSE A 16 1555 1555 1.32 LINK C MSE A 16 N THR A 17 1555 1555 1.34 LINK C ASN A 42 N MSE A 43 1555 1555 1.33 LINK C MSE A 43 N GLY A 44 1555 1555 1.33 LINK C ILE A 45 N MSE A 46 1555 1555 1.33 LINK C MSE A 46 N MSE A 47 1555 1555 1.33 LINK C MSE A 47 N ALA A 48 1555 1555 1.34 LINK C ALA B 0 N MSE B 1 1555 1555 1.33 LINK C MSE B 1 N THR B 2 1555 1555 1.32 LINK C PHE B 15 N MSE B 16 1555 1555 1.34 LINK C MSE B 16 N THR B 17 1555 1555 1.34 LINK C ASN B 42 N MSE B 43 1555 1555 1.34 LINK C MSE B 43 N GLY B 44 1555 1555 1.33 LINK C ILE B 45 N MSE B 46 1555 1555 1.33 LINK C MSE B 46 N MSE B 47 1555 1555 1.33 LINK C MSE B 47 N ALA B 48 1555 1555 1.33 LINK C MSE C 1 N THR C 2 1555 1555 1.33 LINK C PHE C 15 N MSE C 16 1555 1555 1.33 LINK C MSE C 16 N THR C 17 1555 1555 1.34 LINK C ASN C 42 N MSE C 43 1555 1555 1.34 LINK C MSE C 43 N GLY C 44 1555 1555 1.33 LINK C ILE C 45 N MSE C 46 1555 1555 1.33 LINK C MSE C 46 N MSE C 47 1555 1555 1.34 LINK C MSE C 47 N ALA C 48 1555 1555 1.33 CISPEP 1 GLN A 180 GLY A 181 0 11.57 CISPEP 2 GLY A 181 GLY A 182 0 16.88 CRYST1 89.825 57.384 166.865 90.00 91.07 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011133 0.000000 0.000208 0.00000 SCALE2 0.000000 0.017426 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005994 0.00000