HEADER VIRAL PROTEIN 23-FEB-12 4DVN TITLE CRYSTAL STRUCTURE OF THE GLYCOPROTEIN ERNS FROM THE PESTIVIRUS BVDV-1 TITLE 2 IN COMPLEX WITH 2'-UMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: E(RNS) GLYCOPROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: N-TERMINAL FRAGMENT; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOVINE VIRAL DIARRHEA VIRUS; SOURCE 3 ORGANISM_COMMON: BVDV; SOURCE 4 ORGANISM_TAXID: 268305; SOURCE 5 STRAIN: CP7; SOURCE 6 GENE: ERNS; SOURCE 7 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMT-BIP-BASED KEYWDS VIRUS GLYCOPROTEIN, T2 RIBONUCLEASE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.KREY,F.BONTEMS,C.VONRHEIN,M.-C.VANEY,G.BRICOGNE,T.RUEMENAPF,F.A.REY REVDAT 3 13-SEP-23 4DVN 1 HETSYN REVDAT 2 29-JUL-20 4DVN 1 CAVEAT COMPND REMARK SEQADV REVDAT 2 2 1 HETNAM LINK SITE ATOM REVDAT 1 23-MAY-12 4DVN 0 JRNL AUTH T.KREY,F.BONTEMS,C.VONRHEIN,M.C.VANEY,G.BRICOGNE,T.RUMENAPF, JRNL AUTH 2 F.A.REY JRNL TITL CRYSTAL STRUCTURE OF THE PESTIVIRUS ENVELOPE GLYCOPROTEIN JRNL TITL 2 E(RNS) AND MECHANISTIC ANALYSIS OF ITS RIBONUCLEASE JRNL TITL 3 ACTIVITY. JRNL REF STRUCTURE V. 20 862 2012 JRNL REFN ISSN 0969-2126 JRNL PMID 22579253 JRNL DOI 10.1016/J.STR.2012.03.018 REMARK 2 REMARK 2 RESOLUTION. 2.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT BUSTER 2.9.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.4 REMARK 3 NUMBER OF REFLECTIONS : 17246 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.140 REMARK 3 FREE R VALUE TEST SET COUNT : 886 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.38 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.52 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.38 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2052 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2220 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1933 REMARK 3 BIN R VALUE (WORKING SET) : 0.2168 REMARK 3 BIN FREE R VALUE : 0.3091 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 119 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2564 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 379 REMARK 3 SOLVENT ATOMS : 161 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.69 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.84500 REMARK 3 B22 (A**2) : 8.27130 REMARK 3 B33 (A**2) : -16.11630 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.289 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.904 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.888 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3044 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4187 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1096 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 87 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 409 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2749 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : 15 ; 0.000 ; HARMONIC REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 443 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3313 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.11 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.21 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.36 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4DVN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000070839. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-SEP-08 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93340 REMARK 200 MONOCHROMATOR : DIAMOND (001) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA, XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17289 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.380 REMARK 200 RESOLUTION RANGE LOW (A) : 47.410 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.51 REMARK 200 COMPLETENESS FOR SHELL (%) : 64.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4DVK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 33% PEG2000 MME, 100MM NA-ACETATE, REMARK 280 140MM (NH4)2SO4, 50MM KH2PO4, PH 4.6, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 35.39500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 53.27500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.39500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 53.27500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B1227 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 1 REMARK 465 SER A 2 REMARK 465 SER A 164 REMARK 465 ASP A 165 REMARK 465 VAL A 166 REMARK 465 LEU A 167 REMARK 465 ARG B 1 REMARK 465 SER B 2 REMARK 465 SER B 164 REMARK 465 ASP B 165 REMARK 465 VAL B 166 REMARK 465 LEU B 167 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 12 108.99 -169.90 REMARK 500 THR A 69 -88.68 -110.71 REMARK 500 TYR A 87 -34.50 69.97 REMARK 500 ASN A 158 30.08 -85.87 REMARK 500 ILE A 161 -60.97 -101.12 REMARK 500 ALA A 162 163.66 -47.70 REMARK 500 ASP B 12 108.42 -169.98 REMARK 500 THR B 69 -88.49 -110.87 REMARK 500 TYR B 87 -38.87 73.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4DVK RELATED DB: PDB REMARK 900 RELATED ID: 4DVL RELATED DB: PDB REMARK 900 RELATED ID: 4DW3 RELATED DB: PDB DBREF 4DVN A 3 167 UNP Q96662 POLG_BVDVC 271 435 DBREF 4DVN B 3 167 UNP Q96662 POLG_BVDVC 271 435 SEQADV 4DVN ARG A 1 UNP Q96662 EXPRESSION TAG SEQADV 4DVN SER A 2 UNP Q96662 EXPRESSION TAG SEQADV 4DVN ARG B 1 UNP Q96662 EXPRESSION TAG SEQADV 4DVN SER B 2 UNP Q96662 EXPRESSION TAG SEQRES 1 A 167 ARG SER GLU ASN ILE THR GLN TRP ASN LEU GLN ASP ASN SEQRES 2 A 167 GLY THR GLU GLY ILE GLN ARG ALA MET PHE GLN ARG GLY SEQRES 3 A 167 VAL ASN ARG SER LEU HIS GLY ILE TRP PRO GLU LYS ILE SEQRES 4 A 167 CYS THR GLY VAL PRO SER HIS LEU ALA THR ASP THR GLU SEQRES 5 A 167 LEU LYS ALA ILE HIS GLY MET MET ASP ALA SER GLU LYS SEQRES 6 A 167 THR ASN TYR THR CYS CYS ARG LEU GLN ARG HIS GLU TRP SEQRES 7 A 167 ASN LYS HIS GLY TRP CYS ASN TRP TYR ASN ILE GLU PRO SEQRES 8 A 167 TRP ILE LEU LEU MET ASN LYS THR GLN ALA ASN LEU THR SEQRES 9 A 167 GLU GLY GLN PRO LEU ARG GLU CYS ALA VAL THR CYS ARG SEQRES 10 A 167 TYR ASP ARG ASP SER ASP LEU ASN VAL VAL THR GLN ALA SEQRES 11 A 167 ARG ASP SER PRO THR PRO LEU THR GLY CYS LYS LYS GLY SEQRES 12 A 167 LYS ASN PHE SER PHE ALA GLY ILE LEU VAL GLN GLY PRO SEQRES 13 A 167 CYS ASN PHE GLU ILE ALA VAL SER ASP VAL LEU SEQRES 1 B 167 ARG SER GLU ASN ILE THR GLN TRP ASN LEU GLN ASP ASN SEQRES 2 B 167 GLY THR GLU GLY ILE GLN ARG ALA MET PHE GLN ARG GLY SEQRES 3 B 167 VAL ASN ARG SER LEU HIS GLY ILE TRP PRO GLU LYS ILE SEQRES 4 B 167 CYS THR GLY VAL PRO SER HIS LEU ALA THR ASP THR GLU SEQRES 5 B 167 LEU LYS ALA ILE HIS GLY MET MET ASP ALA SER GLU LYS SEQRES 6 B 167 THR ASN TYR THR CYS CYS ARG LEU GLN ARG HIS GLU TRP SEQRES 7 B 167 ASN LYS HIS GLY TRP CYS ASN TRP TYR ASN ILE GLU PRO SEQRES 8 B 167 TRP ILE LEU LEU MET ASN LYS THR GLN ALA ASN LEU THR SEQRES 9 B 167 GLU GLY GLN PRO LEU ARG GLU CYS ALA VAL THR CYS ARG SEQRES 10 B 167 TYR ASP ARG ASP SER ASP LEU ASN VAL VAL THR GLN ALA SEQRES 11 B 167 ARG ASP SER PRO THR PRO LEU THR GLY CYS LYS LYS GLY SEQRES 12 B 167 LYS ASN PHE SER PHE ALA GLY ILE LEU VAL GLN GLY PRO SEQRES 13 B 167 CYS ASN PHE GLU ILE ALA VAL SER ASP VAL LEU MODRES 4DVN ASN A 13 ASN GLYCOSYLATION SITE MODRES 4DVN ASN A 28 ASN GLYCOSYLATION SITE MODRES 4DVN ASN B 97 ASN GLYCOSYLATION SITE MODRES 4DVN ASN A 4 ASN GLYCOSYLATION SITE MODRES 4DVN ASN B 4 ASN GLYCOSYLATION SITE MODRES 4DVN ASN B 102 ASN GLYCOSYLATION SITE MODRES 4DVN ASN A 97 ASN GLYCOSYLATION SITE MODRES 4DVN ASN B 28 ASN GLYCOSYLATION SITE MODRES 4DVN ASN A 102 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET BMA C 5 11 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET BMA D 4 11 HET MAN D 5 11 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET MAN E 4 11 HET MAN E 5 11 HET NAG F 1 14 HET NAG F 2 14 HET NAG A1106 14 HET NAG A1107 14 HET NAG A1108 14 HET SO4 A1114 5 HET SO4 A1115 5 HET SO4 A1116 5 HET SO4 A1117 5 HET U2P A1118 21 HET U2P A1119 21 HET NAG B1106 14 HET NAG B1109 14 HET SO4 B1110 5 HET SO4 B1111 5 HET SO4 B1112 5 HET U2P B1113 21 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM SO4 SULFATE ION HETNAM U2P PHOSPHORIC ACID MONO-[2-(2,4-DIOXO-3,4-DIHYDRO-2H- HETNAM 2 U2P PYRIMIDIN-1-YL)-4-HYDROXY-5-HYDROXYMETHYL-TETRAHYDRO- HETNAM 3 U2P FURAN-3-YL] ESTER HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN U2P URIDINE-2'-PHOSPHATE; 2'-URIDINEMONOPHOSPHATE FORMUL 3 NAG 13(C8 H15 N O6) FORMUL 3 BMA 5(C6 H12 O6) FORMUL 3 MAN 4(C6 H12 O6) FORMUL 10 SO4 7(O4 S 2-) FORMUL 14 U2P 3(C9 H13 N2 O9 P) FORMUL 22 HOH *161(H2 O) HELIX 1 1 GLY A 17 GLY A 26 1 10 HELIX 2 2 THR A 49 ALA A 55 1 7 HELIX 3 3 SER A 63 ASN A 67 5 5 HELIX 4 4 CYS A 71 GLY A 82 1 12 HELIX 5 5 GLY A 82 TYR A 87 1 6 HELIX 6 6 ASN A 88 GLU A 105 1 18 HELIX 7 7 GLY B 17 GLY B 26 1 10 HELIX 8 8 THR B 49 ALA B 55 1 7 HELIX 9 9 SER B 63 ASN B 67 5 5 HELIX 10 10 CYS B 71 GLY B 82 1 12 HELIX 11 11 GLY B 82 TYR B 87 1 6 HELIX 12 12 ASN B 88 GLU B 105 1 18 SHEET 1 A 4 ARG A 29 TRP A 35 0 SHEET 2 A 4 ILE A 5 LEU A 10 -1 N ILE A 5 O TRP A 35 SHEET 3 A 4 LEU A 124 ARG A 131 -1 O ALA A 130 N TRP A 8 SHEET 4 A 4 CYS A 112 ASP A 119 -1 N CYS A 112 O ARG A 131 SHEET 1 B 5 ARG A 29 TRP A 35 0 SHEET 2 B 5 ILE A 5 LEU A 10 -1 N ILE A 5 O TRP A 35 SHEET 3 B 5 LEU A 124 ARG A 131 -1 O ALA A 130 N TRP A 8 SHEET 4 B 5 PHE A 146 PHE A 148 1 O SER A 147 N ASN A 125 SHEET 5 B 5 ILE A 151 VAL A 153 -1 O VAL A 153 N PHE A 146 SHEET 1 C 4 ARG B 29 TRP B 35 0 SHEET 2 C 4 ILE B 5 LEU B 10 -1 N ILE B 5 O TRP B 35 SHEET 3 C 4 LEU B 124 ARG B 131 -1 O ALA B 130 N TRP B 8 SHEET 4 C 4 CYS B 112 ASP B 119 -1 N CYS B 112 O ARG B 131 SHEET 1 D 5 ARG B 29 TRP B 35 0 SHEET 2 D 5 ILE B 5 LEU B 10 -1 N ILE B 5 O TRP B 35 SHEET 3 D 5 LEU B 124 ARG B 131 -1 O ALA B 130 N TRP B 8 SHEET 4 D 5 PHE B 146 PHE B 148 1 O SER B 147 N ASN B 125 SHEET 5 D 5 ILE B 151 VAL B 153 -1 O VAL B 153 N PHE B 146 SSBOND 1 CYS A 40 CYS A 84 1555 1555 2.04 SSBOND 2 CYS A 70 CYS A 71 1555 1555 2.03 SSBOND 3 CYS A 112 CYS A 157 1555 1555 2.04 SSBOND 4 CYS A 116 CYS A 140 1555 1555 2.04 SSBOND 5 CYS B 40 CYS B 84 1555 1555 2.04 SSBOND 6 CYS B 70 CYS B 71 1555 1555 2.03 SSBOND 7 CYS B 112 CYS B 157 1555 1555 2.04 SSBOND 8 CYS B 116 CYS B 140 1555 1555 2.03 LINK ND2 ASN A 4 C1 NAG C 1 1555 1555 1.43 LINK ND2 ASN A 13 C1 NAG D 1 1555 1555 1.43 LINK ND2 ASN A 28 C1 NAG A1106 1555 1555 1.43 LINK ND2 ASN A 97 C1 NAG A1107 1555 1555 1.43 LINK ND2 ASN A 102 C1 NAG A1108 1555 1555 1.43 LINK ND2 ASN B 4 C1 NAG E 1 1555 1555 1.43 LINK ND2 ASN B 28 C1 NAG B1106 1555 1555 1.43 LINK ND2 ASN B 97 C1 NAG F 1 1555 1555 1.43 LINK ND2 ASN B 102 C1 NAG B1109 1555 1555 1.43 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.41 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.42 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.42 LINK O6 BMA C 3 C1 BMA C 5 1555 1555 1.42 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.40 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.42 LINK O3 BMA D 3 C1 BMA D 4 1555 1555 1.40 LINK O6 BMA D 3 C1 MAN D 5 1555 1555 1.40 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.41 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.41 LINK O3 BMA E 3 C1 MAN E 4 1555 1555 1.41 LINK O6 BMA E 3 C1 MAN E 5 1555 1555 1.41 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 CISPEP 1 CYS A 70 CYS A 71 0 7.44 CISPEP 2 CYS B 70 CYS B 71 0 7.46 CRYST1 70.790 106.550 63.860 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014126 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009385 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015659 0.00000