HEADER TRANSCRIPTION 28-FEB-12 4DY4 TITLE HIGH RESOLUTION STRUCTURE OF E.COLI WRBA WITH FMN COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLAVOPROTEIN WRBA; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: TRP REPRESSOR-BINDING PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 405955; SOURCE 4 GENE: WRBA, ECOK1_09050, APECO1_95; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ROSSMANN FOLD, NADH OXIDOREDUCTASE, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR I.KISHKO,J.BRYNDA,I.KUTA SMATANOVA,R.ETTRICH,J.CAREY REVDAT 2 28-FEB-24 4DY4 1 REMARK REVDAT 1 06-MAR-13 4DY4 0 JRNL AUTH I.KISHKO,J.BRYNDA,I.KUTA SMATANOVA,R.ETTRICH,J.CAREY JRNL TITL HIGH RESOLUTION STRUCTURE OF E.COLI WRBA WITH FMN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.71 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 97639 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.150 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.171 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4864 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.23 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5221 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 74.48 REMARK 3 BIN R VALUE (WORKING SET) : 0.2500 REMARK 3 BIN FREE R VALUE SET COUNT : 242 REMARK 3 BIN FREE R VALUE : 0.2590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2749 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 77 REMARK 3 SOLVENT ATOMS : 249 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.03000 REMARK 3 B22 (A**2) : 0.03000 REMARK 3 B33 (A**2) : -0.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.041 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.039 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.022 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.088 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.964 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3000 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1942 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4104 ; 1.536 ; 1.992 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4790 ; 1.721 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 397 ; 6.013 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 107 ;33.969 ;24.206 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 460 ;11.878 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;11.309 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 465 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3342 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 573 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1889 ; 2.465 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 790 ; 1.483 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3035 ; 3.413 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1111 ; 4.570 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1056 ; 6.117 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4939 ; 2.204 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4DY4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000070928. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JAN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9171 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.16 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 97715 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 22.710 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : 0.06400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 75.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.67700 REMARK 200 R SYM FOR SHELL (I) : 0.67700 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% PEG3350, 0.5 M BIS-TRIS, PH 6.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.79500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 30.57500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 30.57500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 42.39750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 30.57500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 30.57500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 127.19250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 30.57500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 30.57500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 42.39750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 30.57500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 30.57500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 127.19250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 84.79500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 153 REMARK 465 ARG A 154 REMARK 465 GLY A 155 REMARK 465 ALA C 144 REMARK 465 GLN C 145 REMARK 465 GLU C 146 REMARK 465 LEU C 147 REMARK 465 PHE C 148 REMARK 465 ASP C 149 REMARK 465 VAL C 150 REMARK 465 SER C 151 REMARK 465 GLN C 152 REMARK 465 VAL C 153 REMARK 465 ARG C 154 REMARK 465 GLY C 155 REMARK 465 GLY C 156 REMARK 465 ASP C 168 REMARK 465 GLY C 169 REMARK 465 SER C 170 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 45 CG CD OE1 NE2 REMARK 470 GLU A 48 CG CD OE1 OE2 REMARK 470 SER A 151 OG REMARK 470 GLN A 152 CG CD OE1 NE2 REMARK 470 GLU A 176 CD OE1 OE2 REMARK 470 ARG C 171 N CA CB CG CD NE CZ REMARK 470 ARG C 171 NH1 NH2 REMARK 470 GLU C 176 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 119 CG2 THR A 157 1.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU C 32 O HOH C 348 5555 1.56 REMARK 500 CD2 LEU C 96 O HOH A 353 7565 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PEG A 202 REMARK 610 PEG A 203 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG C 202 DBREF 4DY4 A 1 197 UNP A1A9Q9 WRBA_ECOK1 2 198 DBREF 4DY4 C 1 197 UNP A1A9Q9 WRBA_ECOK1 2 198 SEQRES 1 A 197 ALA LYS VAL LEU VAL LEU TYR TYR SER MET TYR GLY HIS SEQRES 2 A 197 ILE GLU THR MET ALA ARG ALA VAL ALA GLU GLY ALA SER SEQRES 3 A 197 LYS VAL ASP GLY ALA GLU VAL VAL VAL LYS ARG VAL PRO SEQRES 4 A 197 GLU THR MET PRO PRO GLN LEU PHE GLU LYS ALA GLY GLY SEQRES 5 A 197 LYS THR GLN THR ALA PRO VAL ALA THR PRO GLN GLU LEU SEQRES 6 A 197 ALA ASP TYR ASP ALA ILE ILE PHE GLY THR PRO THR ARG SEQRES 7 A 197 PHE GLY ASN MET SER GLY GLN MET ARG THR PHE LEU ASP SEQRES 8 A 197 GLN THR GLY GLY LEU TRP ALA SER GLY ALA LEU TYR GLY SEQRES 9 A 197 LYS LEU ALA SER VAL PHE SER SER THR GLY THR GLY GLY SEQRES 10 A 197 GLY GLN GLU GLN THR ILE THR SER THR TRP THR THR LEU SEQRES 11 A 197 ALA HIS HIS GLY MET VAL ILE VAL PRO ILE GLY TYR ALA SEQRES 12 A 197 ALA GLN GLU LEU PHE ASP VAL SER GLN VAL ARG GLY GLY SEQRES 13 A 197 THR PRO TYR GLY ALA THR THR ILE ALA GLY GLY ASP GLY SEQRES 14 A 197 SER ARG GLN PRO SER GLN GLU GLU LEU SER ILE ALA ARG SEQRES 15 A 197 TYR GLN GLY GLU TYR VAL ALA GLY LEU ALA VAL LYS LEU SEQRES 16 A 197 ASN GLY SEQRES 1 C 197 ALA LYS VAL LEU VAL LEU TYR TYR SER MET TYR GLY HIS SEQRES 2 C 197 ILE GLU THR MET ALA ARG ALA VAL ALA GLU GLY ALA SER SEQRES 3 C 197 LYS VAL ASP GLY ALA GLU VAL VAL VAL LYS ARG VAL PRO SEQRES 4 C 197 GLU THR MET PRO PRO GLN LEU PHE GLU LYS ALA GLY GLY SEQRES 5 C 197 LYS THR GLN THR ALA PRO VAL ALA THR PRO GLN GLU LEU SEQRES 6 C 197 ALA ASP TYR ASP ALA ILE ILE PHE GLY THR PRO THR ARG SEQRES 7 C 197 PHE GLY ASN MET SER GLY GLN MET ARG THR PHE LEU ASP SEQRES 8 C 197 GLN THR GLY GLY LEU TRP ALA SER GLY ALA LEU TYR GLY SEQRES 9 C 197 LYS LEU ALA SER VAL PHE SER SER THR GLY THR GLY GLY SEQRES 10 C 197 GLY GLN GLU GLN THR ILE THR SER THR TRP THR THR LEU SEQRES 11 C 197 ALA HIS HIS GLY MET VAL ILE VAL PRO ILE GLY TYR ALA SEQRES 12 C 197 ALA GLN GLU LEU PHE ASP VAL SER GLN VAL ARG GLY GLY SEQRES 13 C 197 THR PRO TYR GLY ALA THR THR ILE ALA GLY GLY ASP GLY SEQRES 14 C 197 SER ARG GLN PRO SER GLN GLU GLU LEU SER ILE ALA ARG SEQRES 15 C 197 TYR GLN GLY GLU TYR VAL ALA GLY LEU ALA VAL LYS LEU SEQRES 16 C 197 ASN GLY HET FMN A 201 39 HET PEG A 202 4 HET PEG A 203 4 HET FMN C 201 31 HET PEG C 202 7 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 3 FMN 2(C17 H21 N4 O9 P) FORMUL 4 PEG 3(C4 H10 O3) FORMUL 8 HOH *249(H2 O) HELIX 1 1 GLY A 12 LYS A 27 1 16 HELIX 2 2 PRO A 43 ALA A 50 1 8 HELIX 3 3 PRO A 62 TYR A 68 5 7 HELIX 4 4 SER A 83 ASP A 91 1 9 HELIX 5 5 THR A 93 GLY A 100 1 8 HELIX 6 6 GLY A 118 HIS A 133 1 16 HELIX 7 7 ALA A 144 PHE A 148 5 5 HELIX 8 8 SER A 174 GLY A 197 1 24 HELIX 9 9 GLY C 12 LYS C 27 1 16 HELIX 10 10 PRO C 43 ALA C 50 1 8 HELIX 11 11 PRO C 62 TYR C 68 5 7 HELIX 12 12 SER C 83 ASP C 91 1 9 HELIX 13 13 THR C 93 GLY C 100 1 8 HELIX 14 14 GLY C 118 HIS C 133 1 16 HELIX 15 15 SER C 174 GLY C 197 1 24 SHEET 1 A 5 GLU A 32 ARG A 37 0 SHEET 2 A 5 LYS A 2 TYR A 7 1 N VAL A 5 O VAL A 34 SHEET 3 A 5 ALA A 70 PRO A 76 1 O ILE A 72 N LEU A 4 SHEET 4 A 5 LEU A 106 SER A 112 1 O SER A 108 N PHE A 73 SHEET 5 A 5 VAL A 136 ILE A 137 1 O VAL A 136 N ALA A 107 SHEET 1 B 5 GLU C 32 ARG C 37 0 SHEET 2 B 5 LYS C 2 TYR C 7 1 N VAL C 5 O VAL C 34 SHEET 3 B 5 ALA C 70 PRO C 76 1 O ILE C 72 N LEU C 4 SHEET 4 B 5 LEU C 106 THR C 113 1 O SER C 108 N PHE C 73 SHEET 5 B 5 VAL C 136 ILE C 137 1 O VAL C 136 N ALA C 107 SHEET 1 C 5 GLU C 32 ARG C 37 0 SHEET 2 C 5 LYS C 2 TYR C 7 1 N VAL C 5 O VAL C 34 SHEET 3 C 5 ALA C 70 PRO C 76 1 O ILE C 72 N LEU C 4 SHEET 4 C 5 LEU C 106 THR C 113 1 O SER C 108 N PHE C 73 SHEET 5 C 5 THR C 162 ILE C 164 1 O THR C 163 N THR C 113 SITE 1 AC1 23 SER A 9 MET A 10 TYR A 11 GLY A 12 SITE 2 AC1 23 HIS A 13 ILE A 14 PRO A 76 THR A 77 SITE 3 AC1 23 ARG A 78 PHE A 79 GLY A 80 SER A 112 SITE 4 AC1 23 THR A 113 GLY A 114 THR A 115 GLY A 116 SITE 5 AC1 23 GLY A 117 ALA A 165 HOH A 313 HOH A 330 SITE 6 AC1 23 HOH A 390 ASP C 91 HIS C 132 SITE 1 AC2 9 LEU A 96 TRP A 97 GLY A 100 ALA A 101 SITE 2 AC2 9 LEU A 102 TYR A 103 HIS A 133 HOH A 304 SITE 3 AC2 9 HOH A 340 SITE 1 AC3 4 TRP A 97 HOH A 315 PHE C 79 FMN C 201 SITE 1 AC4 24 ASP A 91 HIS A 132 PEG A 203 SER C 9 SITE 2 AC4 24 MET C 10 TYR C 11 GLY C 12 HIS C 13 SITE 3 AC4 24 ILE C 14 PRO C 76 THR C 77 ARG C 78 SITE 4 AC4 24 PHE C 79 GLY C 80 SER C 112 THR C 113 SITE 5 AC4 24 GLY C 114 THR C 115 GLY C 116 GLY C 117 SITE 6 AC4 24 HOH C 313 HOH C 327 HOH C 349 HOH C 377 SITE 1 AC5 4 PRO C 39 VAL C 59 HOH C 347 HOH C 417 CRYST1 61.150 61.150 169.590 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016353 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016353 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005897 0.00000