data_4DZR # _entry.id 4DZR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4DZR RCSB RCSB070987 WWPDB D_1000070987 # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id MCSG-APC100341 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4DZR _pdbx_database_status.recvd_initial_deposition_date 2012-03-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tan, K.' 1 'Chhor, G.' 2 'Bearden, J.' 3 'Joachimiak, A.' 4 'Midwest Center for Structural Genomics (MCSG)' 5 # _citation.id primary _citation.title ;The crystal structure of protein-(glutamine-N5) methyltransferase (release factor-specific) from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Tan, K.' 1 primary 'Chhor, G.' 2 primary 'Bearden, J.' 3 primary 'Joachimiak, A.' 4 # _cell.entry_id 4DZR _cell.length_a 61.766 _cell.length_b 61.766 _cell.length_c 122.379 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4DZR _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein-(Glutamine-N5) methyltransferase, release factor-specific' 23795.627 1 ? ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 5 water nat water 18.015 5 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;FEVGPDCLIPRPDTEVLVEEAIRFLKR(MSE)PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLS(MSE)DALAVARR NAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRR(MSE)AA LPPYVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTREPGSPPESENL ; _entity_poly.pdbx_seq_one_letter_code_can ;FEVGPDCLIPRPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAV VDWAAADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAG VFLEVGHNQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTREPGSPPESENL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier MCSG-APC100341 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PHE n 1 2 GLU n 1 3 VAL n 1 4 GLY n 1 5 PRO n 1 6 ASP n 1 7 CYS n 1 8 LEU n 1 9 ILE n 1 10 PRO n 1 11 ARG n 1 12 PRO n 1 13 ASP n 1 14 THR n 1 15 GLU n 1 16 VAL n 1 17 LEU n 1 18 VAL n 1 19 GLU n 1 20 GLU n 1 21 ALA n 1 22 ILE n 1 23 ARG n 1 24 PHE n 1 25 LEU n 1 26 LYS n 1 27 ARG n 1 28 MSE n 1 29 PRO n 1 30 SER n 1 31 GLY n 1 32 THR n 1 33 ARG n 1 34 VAL n 1 35 ILE n 1 36 ASP n 1 37 VAL n 1 38 GLY n 1 39 THR n 1 40 GLY n 1 41 SER n 1 42 GLY n 1 43 CYS n 1 44 ILE n 1 45 ALA n 1 46 VAL n 1 47 SER n 1 48 ILE n 1 49 ALA n 1 50 LEU n 1 51 ALA n 1 52 CYS n 1 53 PRO n 1 54 GLY n 1 55 VAL n 1 56 SER n 1 57 VAL n 1 58 THR n 1 59 ALA n 1 60 VAL n 1 61 ASP n 1 62 LEU n 1 63 SER n 1 64 MSE n 1 65 ASP n 1 66 ALA n 1 67 LEU n 1 68 ALA n 1 69 VAL n 1 70 ALA n 1 71 ARG n 1 72 ARG n 1 73 ASN n 1 74 ALA n 1 75 GLU n 1 76 ARG n 1 77 PHE n 1 78 GLY n 1 79 ALA n 1 80 VAL n 1 81 VAL n 1 82 ASP n 1 83 TRP n 1 84 ALA n 1 85 ALA n 1 86 ALA n 1 87 ASP n 1 88 GLY n 1 89 ILE n 1 90 GLU n 1 91 TRP n 1 92 LEU n 1 93 ILE n 1 94 GLU n 1 95 ARG n 1 96 ALA n 1 97 GLU n 1 98 ARG n 1 99 GLY n 1 100 ARG n 1 101 PRO n 1 102 TRP n 1 103 HIS n 1 104 ALA n 1 105 ILE n 1 106 VAL n 1 107 SER n 1 108 ASN n 1 109 PRO n 1 110 PRO n 1 111 TYR n 1 112 ILE n 1 113 PRO n 1 114 THR n 1 115 GLY n 1 116 GLU n 1 117 ILE n 1 118 ASP n 1 119 GLN n 1 120 LEU n 1 121 GLU n 1 122 PRO n 1 123 SER n 1 124 VAL n 1 125 ARG n 1 126 ASP n 1 127 TYR n 1 128 GLU n 1 129 PRO n 1 130 ARG n 1 131 LEU n 1 132 ALA n 1 133 LEU n 1 134 ASP n 1 135 GLY n 1 136 GLY n 1 137 GLU n 1 138 ASP n 1 139 GLY n 1 140 LEU n 1 141 GLN n 1 142 PHE n 1 143 TYR n 1 144 ARG n 1 145 ARG n 1 146 MSE n 1 147 ALA n 1 148 ALA n 1 149 LEU n 1 150 PRO n 1 151 PRO n 1 152 TYR n 1 153 VAL n 1 154 LEU n 1 155 ALA n 1 156 ARG n 1 157 GLY n 1 158 ARG n 1 159 ALA n 1 160 GLY n 1 161 VAL n 1 162 PHE n 1 163 LEU n 1 164 GLU n 1 165 VAL n 1 166 GLY n 1 167 HIS n 1 168 ASN n 1 169 GLN n 1 170 ALA n 1 171 ASP n 1 172 GLU n 1 173 VAL n 1 174 ALA n 1 175 ARG n 1 176 LEU n 1 177 PHE n 1 178 ALA n 1 179 PRO n 1 180 TRP n 1 181 ARG n 1 182 GLU n 1 183 ARG n 1 184 GLY n 1 185 PHE n 1 186 ARG n 1 187 VAL n 1 188 ARG n 1 189 LYS n 1 190 VAL n 1 191 LYS n 1 192 ASP n 1 193 LEU n 1 194 ARG n 1 195 GLY n 1 196 ILE n 1 197 ASP n 1 198 ARG n 1 199 VAL n 1 200 ILE n 1 201 ALA n 1 202 VAL n 1 203 THR n 1 204 ARG n 1 205 GLU n 1 206 PRO n 1 207 GLY n 1 208 SER n 1 209 PRO n 1 210 PRO n 1 211 GLU n 1 212 SER n 1 213 GLU n 1 214 ASN n 1 215 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Aaci_2779 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'subsp. acidocaldarius DSM 446' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 521098 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3) magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code C8WUG7_ALIAD _struct_ref.pdbx_db_accession C8WUG7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;FEVGPDCLIPRPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAV VDWAAADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAG VFLEVGHNQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTREPGSPPESENL ; _struct_ref.pdbx_align_begin 99 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4DZR _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 215 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession C8WUG7 _struct_ref_seq.db_align_beg 99 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 313 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 99 _struct_ref_seq.pdbx_auth_seq_align_end 313 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4DZR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.45 _exptl_crystal.density_percent_sol 49.85 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details ;0.2M calcium acetate hydrate, pH 7.5, 20% (w/v) PEG 3350, 0.0125mg/ml Trypsin, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2012-02-16 _diffrn_detector.details mirror # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 crystal' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97931 1.0 2 0.97948 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.97931, 0.97948' # _reflns.entry_id 4DZR _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 31.0 _reflns.d_resolution_high 2.55 _reflns.number_obs 8235 _reflns.number_all 8235 _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.071 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 28.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.55 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.692 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.pdbx_redundancy 4.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 403 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4DZR _refine.ls_number_reflns_obs 8179 _refine.ls_number_reflns_all 8179 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.883 _refine.ls_d_res_high 2.551 _refine.ls_percent_reflns_obs 99.38 _refine.ls_R_factor_obs 0.2097 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2071 _refine.ls_R_factor_R_free 0.2689 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.63 _refine.ls_number_reflns_R_free 379 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 4.4262 _refine.aniso_B[2][2] 4.4262 _refine.aniso_B[3][3] -8.8525 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.314 _refine.solvent_model_param_bsol 62.155 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.95 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.82 _refine.pdbx_overall_phase_error 26.26 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1255 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 11 _refine_hist.number_atoms_solvent 5 _refine_hist.number_atoms_total 1271 _refine_hist.d_res_high 2.551 _refine_hist.d_res_low 30.883 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.009 ? ? 1293 ? 'X-RAY DIFFRACTION' f_angle_d 1.204 ? ? 1755 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 14.615 ? ? 473 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.069 ? ? 195 ? 'X-RAY DIFFRACTION' f_plane_restr 0.004 ? ? 229 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.5512 2.9202 2526 0.2855 100.00 0.3470 . . 130 . . . . 'X-RAY DIFFRACTION' . 2.9202 3.6781 2559 0.2116 100.00 0.2972 . . 129 . . . . 'X-RAY DIFFRACTION' . 3.6781 30.8852 2715 0.1925 99.00 0.2377 . . 120 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4DZR _struct.title ;The crystal structure of protein-(glutamine-N5) methyltransferase (release factor-specific) from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 ; _struct.pdbx_descriptor 'Protein-(Glutamine-N5) methyltransferase, release factor-specific' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DZR _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'structural genomics, PSI-Biology, protein structure initiative, midwest center for structural genomics, MCSG, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details 'Experimentally unknown. It is predicted the molecule is a monomer.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 4 ? ILE A 9 ? GLY A 102 ILE A 107 5 ? 6 HELX_P HELX_P2 2 ARG A 11 ? LYS A 26 ? ARG A 109 LYS A 124 1 ? 16 HELX_P HELX_P3 3 GLY A 42 ? CYS A 52 ? GLY A 140 CYS A 150 1 ? 11 HELX_P HELX_P4 4 ALA A 84 ? ARG A 98 ? ALA A 182 ARG A 196 1 ? 15 HELX_P HELX_P5 5 LEU A 140 ? ALA A 148 ? LEU A 238 ALA A 246 1 ? 9 HELX_P HELX_P6 6 PRO A 150 ? LEU A 154 ? PRO A 248 LEU A 252 5 ? 5 HELX_P HELX_P7 7 GLN A 169 ? PHE A 177 ? GLN A 267 PHE A 275 1 ? 9 HELX_P HELX_P8 8 ALA A 178 ? ARG A 183 ? ALA A 276 ARG A 281 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 7 SG ? ? ? 1_555 A CYS 43 SG ? ? A CYS 105 A CYS 141 1_555 ? ? ? ? ? ? ? 2.071 ? covale1 covale ? ? A ARG 27 C ? ? ? 1_555 A MSE 28 N ? ? A ARG 125 A MSE 126 1_555 ? ? ? ? ? ? ? 1.324 ? covale2 covale ? ? A MSE 28 C ? ? ? 1_555 A PRO 29 N ? ? A MSE 126 A PRO 127 1_555 ? ? ? ? ? ? ? 1.343 ? covale3 covale ? ? A ARG 145 C ? ? ? 1_555 A MSE 146 N ? ? A ARG 243 A MSE 244 1_555 ? ? ? ? ? ? ? 1.323 ? covale4 covale ? ? A MSE 146 C ? ? ? 1_555 A ALA 147 N ? ? A MSE 244 A ALA 245 1_555 ? ? ? ? ? ? ? 1.334 ? metalc1 metalc ? ? B CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 401 A HOH 503 1_555 ? ? ? ? ? ? ? 2.570 ? metalc2 metalc ? ? A ASN 108 OD1 ? ? ? 1_555 B CA . CA ? ? A ASN 206 A CA 401 1_555 ? ? ? ? ? ? ? 2.583 ? metalc3 metalc ? ? A GLU 164 OE1 ? ? ? 1_555 B CA . CA ? ? A GLU 262 A CA 401 1_555 ? ? ? ? ? ? ? 2.594 ? metalc4 metalc ? ? A ASP 13 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 111 A CA 401 1_555 ? ? ? ? ? ? ? 2.868 ? metalc5 metalc ? ? A ASP 13 OD2 ? ? ? 1_555 B CA . CA ? ? A ASP 111 A CA 401 1_555 ? ? ? ? ? ? ? 3.171 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 55 ? ASP A 61 ? VAL A 153 ASP A 159 A 2 THR A 32 ? GLY A 38 ? THR A 130 GLY A 136 A 3 ALA A 104 ? SER A 107 ? ALA A 202 SER A 205 A 4 ALA A 159 ? GLU A 164 ? ALA A 257 GLU A 262 A 5 ASP A 197 ? ARG A 204 ? ASP A 295 ARG A 302 A 6 PHE A 185 ? ARG A 186 ? PHE A 283 ARG A 284 B 1 VAL A 55 ? ASP A 61 ? VAL A 153 ASP A 159 B 2 THR A 32 ? GLY A 38 ? THR A 130 GLY A 136 B 3 ALA A 104 ? SER A 107 ? ALA A 202 SER A 205 B 4 ALA A 159 ? GLU A 164 ? ALA A 257 GLU A 262 B 5 ASP A 197 ? ARG A 204 ? ASP A 295 ARG A 302 B 6 LYS A 189 ? LYS A 191 ? LYS A 287 LYS A 289 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 58 ? O THR A 156 N ASP A 36 ? N ASP A 134 A 2 3 N VAL A 37 ? N VAL A 135 O VAL A 106 ? O VAL A 204 A 3 4 N ILE A 105 ? N ILE A 203 O PHE A 162 ? O PHE A 260 A 4 5 N LEU A 163 ? N LEU A 261 O ILE A 200 ? O ILE A 298 A 5 6 O THR A 203 ? O THR A 301 N ARG A 186 ? N ARG A 284 B 1 2 O THR A 58 ? O THR A 156 N ASP A 36 ? N ASP A 134 B 2 3 N VAL A 37 ? N VAL A 135 O VAL A 106 ? O VAL A 204 B 3 4 N ILE A 105 ? N ILE A 203 O PHE A 162 ? O PHE A 260 B 4 5 N LEU A 163 ? N LEU A 261 O ILE A 200 ? O ILE A 298 B 5 6 O VAL A 199 ? O VAL A 297 N VAL A 190 ? N VAL A 288 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE CA A 401' AC2 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE ACT A 402' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE GOL A 403' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP A 13 ? ASP A 111 . ? 1_555 ? 2 AC1 5 ASN A 108 ? ASN A 206 . ? 1_555 ? 3 AC1 5 PRO A 109 ? PRO A 207 . ? 1_555 ? 4 AC1 5 GLU A 164 ? GLU A 262 . ? 1_555 ? 5 AC1 5 HOH E . ? HOH A 503 . ? 1_555 ? 6 AC2 2 PHE A 1 ? PHE A 99 . ? 1_555 ? 7 AC2 2 PHE A 1 ? PHE A 99 . ? 7_555 ? 8 AC3 4 GLY A 4 ? GLY A 102 . ? 1_555 ? 9 AC3 4 PRO A 5 ? PRO A 103 . ? 1_555 ? 10 AC3 4 CYS A 7 ? CYS A 105 . ? 1_555 ? 11 AC3 4 ALA A 49 ? ALA A 147 . ? 7_555 ? # _database_PDB_matrix.entry_id 4DZR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4DZR _atom_sites.fract_transf_matrix[1][1] 0.016190 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016190 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008171 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PHE 1 99 99 PHE PHE A . n A 1 2 GLU 2 100 100 GLU GLU A . n A 1 3 VAL 3 101 101 VAL VAL A . n A 1 4 GLY 4 102 102 GLY GLY A . n A 1 5 PRO 5 103 103 PRO PRO A . n A 1 6 ASP 6 104 104 ASP ASP A . n A 1 7 CYS 7 105 105 CYS CYS A . n A 1 8 LEU 8 106 106 LEU LEU A . n A 1 9 ILE 9 107 107 ILE ILE A . n A 1 10 PRO 10 108 108 PRO PRO A . n A 1 11 ARG 11 109 109 ARG ARG A . n A 1 12 PRO 12 110 110 PRO PRO A . n A 1 13 ASP 13 111 111 ASP ASP A . n A 1 14 THR 14 112 112 THR THR A . n A 1 15 GLU 15 113 113 GLU GLU A . n A 1 16 VAL 16 114 114 VAL VAL A . n A 1 17 LEU 17 115 115 LEU LEU A . n A 1 18 VAL 18 116 116 VAL VAL A . n A 1 19 GLU 19 117 117 GLU GLU A . n A 1 20 GLU 20 118 118 GLU GLU A . n A 1 21 ALA 21 119 119 ALA ALA A . n A 1 22 ILE 22 120 120 ILE ILE A . n A 1 23 ARG 23 121 121 ARG ARG A . n A 1 24 PHE 24 122 122 PHE PHE A . n A 1 25 LEU 25 123 123 LEU LEU A . n A 1 26 LYS 26 124 124 LYS LYS A . n A 1 27 ARG 27 125 125 ARG ARG A . n A 1 28 MSE 28 126 126 MSE MSE A . n A 1 29 PRO 29 127 127 PRO PRO A . n A 1 30 SER 30 128 128 SER SER A . n A 1 31 GLY 31 129 129 GLY GLY A . n A 1 32 THR 32 130 130 THR THR A . n A 1 33 ARG 33 131 131 ARG ARG A . n A 1 34 VAL 34 132 132 VAL VAL A . n A 1 35 ILE 35 133 133 ILE ILE A . n A 1 36 ASP 36 134 134 ASP ASP A . n A 1 37 VAL 37 135 135 VAL VAL A . n A 1 38 GLY 38 136 136 GLY GLY A . n A 1 39 THR 39 137 137 THR THR A . n A 1 40 GLY 40 138 138 GLY GLY A . n A 1 41 SER 41 139 139 SER SER A . n A 1 42 GLY 42 140 140 GLY GLY A . n A 1 43 CYS 43 141 141 CYS CYS A . n A 1 44 ILE 44 142 142 ILE ILE A . n A 1 45 ALA 45 143 143 ALA ALA A . n A 1 46 VAL 46 144 144 VAL VAL A . n A 1 47 SER 47 145 145 SER SER A . n A 1 48 ILE 48 146 146 ILE ILE A . n A 1 49 ALA 49 147 147 ALA ALA A . n A 1 50 LEU 50 148 148 LEU LEU A . n A 1 51 ALA 51 149 149 ALA ALA A . n A 1 52 CYS 52 150 150 CYS CYS A . n A 1 53 PRO 53 151 151 PRO PRO A . n A 1 54 GLY 54 152 152 GLY GLY A . n A 1 55 VAL 55 153 153 VAL VAL A . n A 1 56 SER 56 154 154 SER SER A . n A 1 57 VAL 57 155 155 VAL VAL A . n A 1 58 THR 58 156 156 THR THR A . n A 1 59 ALA 59 157 157 ALA ALA A . n A 1 60 VAL 60 158 158 VAL VAL A . n A 1 61 ASP 61 159 159 ASP ASP A . n A 1 62 LEU 62 160 160 LEU LEU A . n A 1 63 SER 63 161 161 SER SER A . n A 1 64 MSE 64 162 ? ? ? A . n A 1 65 ASP 65 163 ? ? ? A . n A 1 66 ALA 66 164 ? ? ? A . n A 1 67 LEU 67 165 ? ? ? A . n A 1 68 ALA 68 166 ? ? ? A . n A 1 69 VAL 69 167 ? ? ? A . n A 1 70 ALA 70 168 ? ? ? A . n A 1 71 ARG 71 169 ? ? ? A . n A 1 72 ARG 72 170 ? ? ? A . n A 1 73 ASN 73 171 ? ? ? A . n A 1 74 ALA 74 172 ? ? ? A . n A 1 75 GLU 75 173 ? ? ? A . n A 1 76 ARG 76 174 ? ? ? A . n A 1 77 PHE 77 175 ? ? ? A . n A 1 78 GLY 78 176 ? ? ? A . n A 1 79 ALA 79 177 ? ? ? A . n A 1 80 VAL 80 178 ? ? ? A . n A 1 81 VAL 81 179 ? ? ? A . n A 1 82 ASP 82 180 ? ? ? A . n A 1 83 TRP 83 181 181 TRP TRP A . n A 1 84 ALA 84 182 182 ALA ALA A . n A 1 85 ALA 85 183 183 ALA ALA A . n A 1 86 ALA 86 184 184 ALA ALA A . n A 1 87 ASP 87 185 185 ASP ASP A . n A 1 88 GLY 88 186 186 GLY GLY A . n A 1 89 ILE 89 187 187 ILE ILE A . n A 1 90 GLU 90 188 188 GLU GLU A . n A 1 91 TRP 91 189 189 TRP TRP A . n A 1 92 LEU 92 190 190 LEU LEU A . n A 1 93 ILE 93 191 191 ILE ILE A . n A 1 94 GLU 94 192 192 GLU GLU A . n A 1 95 ARG 95 193 193 ARG ARG A . n A 1 96 ALA 96 194 194 ALA ALA A . n A 1 97 GLU 97 195 195 GLU GLU A . n A 1 98 ARG 98 196 196 ARG ARG A . n A 1 99 GLY 99 197 197 GLY GLY A . n A 1 100 ARG 100 198 198 ARG ARG A . n A 1 101 PRO 101 199 199 PRO PRO A . n A 1 102 TRP 102 200 200 TRP TRP A . n A 1 103 HIS 103 201 201 HIS HIS A . n A 1 104 ALA 104 202 202 ALA ALA A . n A 1 105 ILE 105 203 203 ILE ILE A . n A 1 106 VAL 106 204 204 VAL VAL A . n A 1 107 SER 107 205 205 SER SER A . n A 1 108 ASN 108 206 206 ASN ASN A . n A 1 109 PRO 109 207 207 PRO PRO A . n A 1 110 PRO 110 208 208 PRO PRO A . n A 1 111 TYR 111 209 209 TYR TYR A . n A 1 112 ILE 112 210 210 ILE ILE A . n A 1 113 PRO 113 211 211 PRO PRO A . n A 1 114 THR 114 212 ? ? ? A . n A 1 115 GLY 115 213 ? ? ? A . n A 1 116 GLU 116 214 ? ? ? A . n A 1 117 ILE 117 215 ? ? ? A . n A 1 118 ASP 118 216 ? ? ? A . n A 1 119 GLN 119 217 ? ? ? A . n A 1 120 LEU 120 218 ? ? ? A . n A 1 121 GLU 121 219 ? ? ? A . n A 1 122 PRO 122 220 ? ? ? A . n A 1 123 SER 123 221 ? ? ? A . n A 1 124 VAL 124 222 ? ? ? A . n A 1 125 ARG 125 223 ? ? ? A . n A 1 126 ASP 126 224 ? ? ? A . n A 1 127 TYR 127 225 ? ? ? A . n A 1 128 GLU 128 226 ? ? ? A . n A 1 129 PRO 129 227 ? ? ? A . n A 1 130 ARG 130 228 ? ? ? A . n A 1 131 LEU 131 229 ? ? ? A . n A 1 132 ALA 132 230 ? ? ? A . n A 1 133 LEU 133 231 ? ? ? A . n A 1 134 ASP 134 232 ? ? ? A . n A 1 135 GLY 135 233 ? ? ? A . n A 1 136 GLY 136 234 ? ? ? A . n A 1 137 GLU 137 235 ? ? ? A . n A 1 138 ASP 138 236 236 ASP ASP A . n A 1 139 GLY 139 237 237 GLY GLY A . n A 1 140 LEU 140 238 238 LEU LEU A . n A 1 141 GLN 141 239 239 GLN GLN A . n A 1 142 PHE 142 240 240 PHE PHE A . n A 1 143 TYR 143 241 241 TYR TYR A . n A 1 144 ARG 144 242 242 ARG ARG A . n A 1 145 ARG 145 243 243 ARG ARG A . n A 1 146 MSE 146 244 244 MSE MSE A . n A 1 147 ALA 147 245 245 ALA ALA A . n A 1 148 ALA 148 246 246 ALA ALA A . n A 1 149 LEU 149 247 247 LEU LEU A . n A 1 150 PRO 150 248 248 PRO PRO A . n A 1 151 PRO 151 249 249 PRO PRO A . n A 1 152 TYR 152 250 250 TYR TYR A . n A 1 153 VAL 153 251 251 VAL VAL A . n A 1 154 LEU 154 252 252 LEU LEU A . n A 1 155 ALA 155 253 253 ALA ALA A . n A 1 156 ARG 156 254 254 ARG ALA A . n A 1 157 GLY 157 255 255 GLY GLY A . n A 1 158 ARG 158 256 256 ARG ARG A . n A 1 159 ALA 159 257 257 ALA ALA A . n A 1 160 GLY 160 258 258 GLY GLY A . n A 1 161 VAL 161 259 259 VAL VAL A . n A 1 162 PHE 162 260 260 PHE PHE A . n A 1 163 LEU 163 261 261 LEU LEU A . n A 1 164 GLU 164 262 262 GLU GLU A . n A 1 165 VAL 165 263 263 VAL VAL A . n A 1 166 GLY 166 264 264 GLY GLY A . n A 1 167 HIS 167 265 265 HIS HIS A . n A 1 168 ASN 168 266 266 ASN ASN A . n A 1 169 GLN 169 267 267 GLN ALA A . n A 1 170 ALA 170 268 268 ALA ALA A . n A 1 171 ASP 171 269 269 ASP ASP A . n A 1 172 GLU 172 270 270 GLU GLU A . n A 1 173 VAL 173 271 271 VAL VAL A . n A 1 174 ALA 174 272 272 ALA ALA A . n A 1 175 ARG 175 273 273 ARG ARG A . n A 1 176 LEU 176 274 274 LEU LEU A . n A 1 177 PHE 177 275 275 PHE PHE A . n A 1 178 ALA 178 276 276 ALA ALA A . n A 1 179 PRO 179 277 277 PRO PRO A . n A 1 180 TRP 180 278 278 TRP TRP A . n A 1 181 ARG 181 279 279 ARG ARG A . n A 1 182 GLU 182 280 280 GLU GLU A . n A 1 183 ARG 183 281 281 ARG ARG A . n A 1 184 GLY 184 282 282 GLY GLY A . n A 1 185 PHE 185 283 283 PHE PHE A . n A 1 186 ARG 186 284 284 ARG ALA A . n A 1 187 VAL 187 285 285 VAL VAL A . n A 1 188 ARG 188 286 286 ARG ARG A . n A 1 189 LYS 189 287 287 LYS LYS A . n A 1 190 VAL 190 288 288 VAL VAL A . n A 1 191 LYS 191 289 289 LYS LYS A . n A 1 192 ASP 192 290 290 ASP ASP A . n A 1 193 LEU 193 291 291 LEU LEU A . n A 1 194 ARG 194 292 292 ARG ARG A . n A 1 195 GLY 195 293 293 GLY GLY A . n A 1 196 ILE 196 294 294 ILE ILE A . n A 1 197 ASP 197 295 295 ASP ASP A . n A 1 198 ARG 198 296 296 ARG ARG A . n A 1 199 VAL 199 297 297 VAL VAL A . n A 1 200 ILE 200 298 298 ILE ILE A . n A 1 201 ALA 201 299 299 ALA ALA A . n A 1 202 VAL 202 300 300 VAL VAL A . n A 1 203 THR 203 301 301 THR THR A . n A 1 204 ARG 204 302 302 ARG ARG A . n A 1 205 GLU 205 303 303 GLU GLU A . n A 1 206 PRO 206 304 304 PRO PRO A . n A 1 207 GLY 207 305 ? ? ? A . n A 1 208 SER 208 306 ? ? ? A . n A 1 209 PRO 209 307 ? ? ? A . n A 1 210 PRO 210 308 ? ? ? A . n A 1 211 GLU 211 309 ? ? ? A . n A 1 212 SER 212 310 ? ? ? A . n A 1 213 GLU 213 311 ? ? ? A . n A 1 214 ASN 214 312 ? ? ? A . n A 1 215 LEU 215 313 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 28 A MSE 126 ? MET SELENOMETHIONINE 2 A MSE 146 A MSE 244 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E 2 1,2 A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 2800 ? 2 MORE -37 ? 2 'SSA (A^2)' 15630 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A ACT 402 ? C ACT . 2 1 A ACT 402 ? C ACT . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? E HOH . ? A HOH 503 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OD1 ? A ASN 108 ? A ASN 206 ? 1_555 75.9 ? 2 O ? E HOH . ? A HOH 503 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OE1 ? A GLU 164 ? A GLU 262 ? 1_555 163.9 ? 3 OD1 ? A ASN 108 ? A ASN 206 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OE1 ? A GLU 164 ? A GLU 262 ? 1_555 88.4 ? 4 O ? E HOH . ? A HOH 503 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OD1 ? A ASP 13 ? A ASP 111 ? 1_555 71.0 ? 5 OD1 ? A ASN 108 ? A ASN 206 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OD1 ? A ASP 13 ? A ASP 111 ? 1_555 68.4 ? 6 OE1 ? A GLU 164 ? A GLU 262 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OD1 ? A ASP 13 ? A ASP 111 ? 1_555 106.9 ? 7 O ? E HOH . ? A HOH 503 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OD2 ? A ASP 13 ? A ASP 111 ? 1_555 111.8 ? 8 OD1 ? A ASN 108 ? A ASN 206 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OD2 ? A ASP 13 ? A ASP 111 ? 1_555 90.2 ? 9 OE1 ? A GLU 164 ? A GLU 262 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OD2 ? A ASP 13 ? A ASP 111 ? 1_555 71.3 ? 10 OD1 ? A ASP 13 ? A ASP 111 ? 1_555 CA ? B CA . ? A CA 401 ? 1_555 OD2 ? A ASP 13 ? A ASP 111 ? 1_555 42.6 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2012-03-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 7.2410 _pdbx_refine_tls.origin_y 14.5400 _pdbx_refine_tls.origin_z 15.4956 _pdbx_refine_tls.T[1][1] 0.5504 _pdbx_refine_tls.T[2][2] 0.4244 _pdbx_refine_tls.T[3][3] 0.2727 _pdbx_refine_tls.T[1][2] 0.1326 _pdbx_refine_tls.T[1][3] -0.0581 _pdbx_refine_tls.T[2][3] 0.0217 _pdbx_refine_tls.L[1][1] 2.8335 _pdbx_refine_tls.L[2][2] 5.3863 _pdbx_refine_tls.L[3][3] 10.6789 _pdbx_refine_tls.L[1][2] 0.7852 _pdbx_refine_tls.L[1][3] -0.3953 _pdbx_refine_tls.L[2][3] 1.0661 _pdbx_refine_tls.S[1][1] 0.0771 _pdbx_refine_tls.S[1][2] -0.3980 _pdbx_refine_tls.S[1][3] 0.1045 _pdbx_refine_tls.S[2][1] 0.7514 _pdbx_refine_tls.S[2][2] 0.0235 _pdbx_refine_tls.S[2][3] -0.0055 _pdbx_refine_tls.S[3][1] 0.1368 _pdbx_refine_tls.S[3][2] -1.0472 _pdbx_refine_tls.S[3][3] -0.0771 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details 'chain A' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 SHELXD phasing . ? 2 MLPHARE phasing . ? 3 DM 'model building' . ? 4 RESOLVE 'model building' . ? 5 HKL-3000 phasing . ? 6 PHENIX refinement '(phenix.refine: 1.7.1_743)' ? 7 HKL-3000 'data reduction' . ? 8 HKL-3000 'data scaling' . ? 9 DM phasing . ? 10 RESOLVE phasing . ? 11 # _pdbx_entry_details.entry_id 4DZR _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE AUTHORS STATE THAT THE EXPRESSED PROTEIN WAS A FULL LENGTH PROTEIN WITH SEQUENCE: SNA(MSE)SEAKYFVARLLKAIAEQLPQSPAYRALPLDE RKRLAEREAEQIVAHALGWDRVKLLQSLGDEVPDEIAERAARLAALRVQGEPLAYVLGKQDF YGRTFEVGPDCLIPRPDTEVLVEEAIRFLKR(MSE)PSGTRVIDVGTGSGCIAVSIALACPG VSVTAVDLS(MSE)DALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSNPPYI PTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRR(MSE)AALPPYVLARGRAGVFLEVGHNQA DEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTREPGSPPESENL AND SINCE TRYPSIN WAS ADDED IN PROTEIN FOR CRYSTALLIZATION PURPOSES, THE PROTEIN WAS CHOPPED AT MULTIPLE SITES. ESPECIALLY, AN EXPECTED N-TERMINAL DOMAIN WAS COMPLETELY GONE AND SEVERAL LOOPS ARE MISSING IN THE STRUCTURE. HOWEVER, THE AUTHORS DO NOT KNOW EXACTLY WHERE THE SEQUENCE STARTS. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 111 ? ? -16.44 -71.18 2 1 PRO A 127 ? ? -69.91 -176.68 3 1 ARG A 286 ? ? -170.14 134.46 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 254 ? CG ? A ARG 156 CG 2 1 Y 1 A ARG 254 ? CD ? A ARG 156 CD 3 1 Y 1 A ARG 254 ? NE ? A ARG 156 NE 4 1 Y 1 A ARG 254 ? CZ ? A ARG 156 CZ 5 1 Y 1 A ARG 254 ? NH1 ? A ARG 156 NH1 6 1 Y 1 A ARG 254 ? NH2 ? A ARG 156 NH2 7 1 Y 1 A GLN 267 ? CG ? A GLN 169 CG 8 1 Y 1 A GLN 267 ? CD ? A GLN 169 CD 9 1 Y 1 A GLN 267 ? OE1 ? A GLN 169 OE1 10 1 Y 1 A GLN 267 ? NE2 ? A GLN 169 NE2 11 1 Y 1 A ARG 284 ? CG ? A ARG 186 CG 12 1 Y 1 A ARG 284 ? CD ? A ARG 186 CD 13 1 Y 1 A ARG 284 ? NE ? A ARG 186 NE 14 1 Y 1 A ARG 284 ? CZ ? A ARG 186 CZ 15 1 Y 1 A ARG 284 ? NH1 ? A ARG 186 NH1 16 1 Y 1 A ARG 284 ? NH2 ? A ARG 186 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 162 ? A MSE 64 2 1 Y 1 A ASP 163 ? A ASP 65 3 1 Y 1 A ALA 164 ? A ALA 66 4 1 Y 1 A LEU 165 ? A LEU 67 5 1 Y 1 A ALA 166 ? A ALA 68 6 1 Y 1 A VAL 167 ? A VAL 69 7 1 Y 1 A ALA 168 ? A ALA 70 8 1 Y 1 A ARG 169 ? A ARG 71 9 1 Y 1 A ARG 170 ? A ARG 72 10 1 Y 1 A ASN 171 ? A ASN 73 11 1 Y 1 A ALA 172 ? A ALA 74 12 1 Y 1 A GLU 173 ? A GLU 75 13 1 Y 1 A ARG 174 ? A ARG 76 14 1 Y 1 A PHE 175 ? A PHE 77 15 1 Y 1 A GLY 176 ? A GLY 78 16 1 Y 1 A ALA 177 ? A ALA 79 17 1 Y 1 A VAL 178 ? A VAL 80 18 1 Y 1 A VAL 179 ? A VAL 81 19 1 Y 1 A ASP 180 ? A ASP 82 20 1 Y 1 A THR 212 ? A THR 114 21 1 Y 1 A GLY 213 ? A GLY 115 22 1 Y 1 A GLU 214 ? A GLU 116 23 1 Y 1 A ILE 215 ? A ILE 117 24 1 Y 1 A ASP 216 ? A ASP 118 25 1 Y 1 A GLN 217 ? A GLN 119 26 1 Y 1 A LEU 218 ? A LEU 120 27 1 Y 1 A GLU 219 ? A GLU 121 28 1 Y 1 A PRO 220 ? A PRO 122 29 1 Y 1 A SER 221 ? A SER 123 30 1 Y 1 A VAL 222 ? A VAL 124 31 1 Y 1 A ARG 223 ? A ARG 125 32 1 Y 1 A ASP 224 ? A ASP 126 33 1 Y 1 A TYR 225 ? A TYR 127 34 1 Y 1 A GLU 226 ? A GLU 128 35 1 Y 1 A PRO 227 ? A PRO 129 36 1 Y 1 A ARG 228 ? A ARG 130 37 1 Y 1 A LEU 229 ? A LEU 131 38 1 Y 1 A ALA 230 ? A ALA 132 39 1 Y 1 A LEU 231 ? A LEU 133 40 1 Y 1 A ASP 232 ? A ASP 134 41 1 Y 1 A GLY 233 ? A GLY 135 42 1 Y 1 A GLY 234 ? A GLY 136 43 1 Y 1 A GLU 235 ? A GLU 137 44 1 Y 1 A GLY 305 ? A GLY 207 45 1 Y 1 A SER 306 ? A SER 208 46 1 Y 1 A PRO 307 ? A PRO 209 47 1 Y 1 A PRO 308 ? A PRO 210 48 1 Y 1 A GLU 309 ? A GLU 211 49 1 Y 1 A SER 310 ? A SER 212 50 1 Y 1 A GLU 311 ? A GLU 213 51 1 Y 1 A ASN 312 ? A ASN 214 52 1 Y 1 A LEU 313 ? A LEU 215 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 'ACETATE ION' ACT 4 GLYCEROL GOL 5 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 401 1 CA CA A . C 3 ACT 1 402 1 ACT ACT A . D 4 GOL 1 403 1 GOL GOL A . E 5 HOH 1 501 1 HOH HOH A . E 5 HOH 2 502 2 HOH HOH A . E 5 HOH 3 503 3 HOH HOH A . E 5 HOH 4 504 4 HOH HOH A . E 5 HOH 5 505 5 HOH HOH A . #