HEADER PROTEIN FIBRIL 04-MAR-12 4E0M TITLE SVQIVYK SEGMENT FROM HUMAN TAU (305-311) DISPLAYED ON 54-MEMBERED TITLE 2 MACROCYCLE SCAFFOLD (FORM I) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIC PSEUDO-PEPTIDE SVQIVYK(ORN)EF(HAO)(4BF)K(ORN); COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: SYNTHETIC MOLECULE KEYWDS AMYLOID, OUT-OF-REGISTER, FIBER-FORMING, MACROCYCLE, PROTEIN FIBRIL EXPDTA X-RAY DIFFRACTION AUTHOR M.ZHAO,C.LIU,S.R.MICHAEL,D.EISENBERG REVDAT 3 15-NOV-23 4E0M 1 REMARK LINK ATOM REVDAT 2 11-OCT-17 4E0M 1 REMARK REVDAT 1 13-FEB-13 4E0M 0 JRNL AUTH C.LIU,M.ZHAO,L.JIANG,P.N.CHENG,J.PARK,M.R.SAWAYA, JRNL AUTH 2 A.PENSALFINI,D.GOU,A.J.BERK,C.G.GLABE,J.NOWICK,D.EISENBERG JRNL TITL OUT-OF-REGISTER BETA-SHEETS SUGGEST A PATHWAY TO TOXIC JRNL TITL 2 AMYLOID AGGREGATES JRNL REF PROC.NATL.ACAD.SCI.USA V. 109 20913 2012 JRNL REFN ISSN 0027-8424 JRNL PMID 23213214 JRNL DOI 10.1073/PNAS.1218792109 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.22 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 6519 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.850 REMARK 3 FREE R VALUE TEST SET COUNT : 642 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 5 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.96 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.86 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 1839 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1611 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1657 REMARK 3 BIN R VALUE (WORKING SET) : 0.1539 REMARK 3 BIN FREE R VALUE : 0.2276 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 182 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 512 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 51 REMARK 3 SOLVENT ATOMS : 28 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.82 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.86190 REMARK 3 B22 (A**2) : 1.85810 REMARK 3 B33 (A**2) : 1.00380 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -3.81440 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.180 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.129 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.931 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 579 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 703 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 163 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 6 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 55 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 579 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : NULL ; NULL ; NULL REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : NULL ; NULL ; NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.29 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : NULL REMARK 3 OTHER TORSION ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: A 0 A 13 REMARK 3 ORIGIN FOR THE GROUP (A): -19.8576 -27.2394 -1.3919 REMARK 3 T TENSOR REMARK 3 T11: 0.0110 T22: -0.0115 REMARK 3 T33: -0.0023 T12: 0.0130 REMARK 3 T13: 0.0192 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.0753 L22: 1.7450 REMARK 3 L33: 1.8355 L12: 1.6271 REMARK 3 L13: 1.2704 L23: 0.3163 REMARK 3 S TENSOR REMARK 3 S11: 0.0447 S12: 0.0558 S13: 0.1607 REMARK 3 S21: 0.1470 S22: -0.0087 S23: 0.1412 REMARK 3 S31: 0.0567 S32: -0.0040 S33: -0.0360 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: B 0 B 13 REMARK 3 ORIGIN FOR THE GROUP (A): -19.1998 -17.7555 -3.2241 REMARK 3 T TENSOR REMARK 3 T11: -0.0500 T22: -0.0595 REMARK 3 T33: -0.0751 T12: 0.0137 REMARK 3 T13: 0.0318 T23: -0.0119 REMARK 3 L TENSOR REMARK 3 L11: 0.9242 L22: 7.2824 REMARK 3 L33: 1.7875 L12: -1.2270 REMARK 3 L13: 0.0446 L23: 2.6351 REMARK 3 S TENSOR REMARK 3 S11: 0.1101 S12: -0.0107 S13: 0.0987 REMARK 3 S21: -0.1211 S22: -0.1104 S23: 0.0506 REMARK 3 S31: -0.1906 S32: -0.1136 S33: 0.0003 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: C 0 C 13 REMARK 3 ORIGIN FOR THE GROUP (A): 1.9368 -16.6877 -16.4196 REMARK 3 T TENSOR REMARK 3 T11: -0.1457 T22: -0.1138 REMARK 3 T33: -0.0906 T12: -0.0107 REMARK 3 T13: 0.0268 T23: 0.0154 REMARK 3 L TENSOR REMARK 3 L11: 1.7149 L22: 3.6902 REMARK 3 L33: 2.1247 L12: 0.5130 REMARK 3 L13: 0.3475 L23: 0.6135 REMARK 3 S TENSOR REMARK 3 S11: 0.0978 S12: -0.1482 S13: 0.1472 REMARK 3 S21: 0.0222 S22: -0.1152 S23: -0.0704 REMARK 3 S31: -0.0021 S32: 0.2262 S33: 0.0175 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: D 0 D 13 REMARK 3 ORIGIN FOR THE GROUP (A): 2.8193 -26.4748 -17.7993 REMARK 3 T TENSOR REMARK 3 T11: -0.0646 T22: -0.0300 REMARK 3 T33: -0.0582 T12: -0.0038 REMARK 3 T13: 0.0284 T23: 0.0150 REMARK 3 L TENSOR REMARK 3 L11: 1.3910 L22: 4.5354 REMARK 3 L33: 1.4690 L12: -0.1185 REMARK 3 L13: -0.1887 L23: 0.2754 REMARK 3 S TENSOR REMARK 3 S11: -0.0514 S12: -0.2411 S13: -0.0070 REMARK 3 S21: -0.0603 S22: -0.0392 S23: -0.1422 REMARK 3 S31: 0.2287 S32: 0.0704 S33: 0.0906 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS; U VALUES: RESIDUAL ONLY REMARK 4 REMARK 4 4E0M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAR-12. REMARK 100 THE DEPOSITION ID IS D_1000071018. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91609 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 18.220 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.8300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.42400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NA/K PHOSPHATE BUFFER PH 6.2, 35% REMARK 280 (V/V) 2-METHYL-2,4-PENTANEDIOL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 29.16000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 12.67000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 29.16000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 12.67000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 2830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 2850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 9 CG CD OE1 OE2 REMARK 470 LYS A 13 CG CD CE NZ REMARK 470 GLU D 9 CG CD OE1 OE2 REMARK 470 LYS D 13 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE ORN B 0 O LYS B 13 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 HAO A 11 CA - C - N ANGL. DEV. = 26.5 DEGREES REMARK 500 LYS A 13 C - N - CA ANGL. DEV. = 15.5 DEGREES REMARK 500 HAO B 11 CA - C - N ANGL. DEV. = 29.8 DEGREES REMARK 500 HAO C 11 CA - C - N ANGL. DEV. = 21.2 DEGREES REMARK 500 4BF C 12 CA - C - N ANGL. DEV. = -16.9 DEGREES REMARK 500 HAO D 11 CA - C - N ANGL. DEV. = 28.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 4BF C 12 -13.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 C 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 C 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD C 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 D 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 D 102 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4E0K RELATED DB: PDB REMARK 900 RELATED ID: 4E0L RELATED DB: PDB REMARK 900 RELATED ID: 4E0N RELATED DB: PDB REMARK 900 RELATED ID: 4E0O RELATED DB: PDB DBREF 4E0M A 0 13 PDB 4E0M 4E0M 0 13 DBREF 4E0M B 0 13 PDB 4E0M 4E0M 0 13 DBREF 4E0M C 0 13 PDB 4E0M 4E0M 0 13 DBREF 4E0M D 0 13 PDB 4E0M 4E0M 0 13 SEQRES 1 A 14 ORN SER VAL GLN ILE VAL TYR LYS ORN GLU PHE HAO 4BF SEQRES 2 A 14 LYS SEQRES 1 B 14 ORN SER VAL GLN ILE VAL TYR LYS ORN GLU PHE HAO 4BF SEQRES 2 B 14 LYS SEQRES 1 C 14 ORN SER VAL GLN ILE VAL TYR LYS ORN GLU PHE HAO 4BF SEQRES 2 C 14 LYS SEQRES 1 D 14 ORN SER VAL GLN ILE VAL TYR LYS ORN GLU PHE HAO 4BF SEQRES 2 D 14 LYS MODRES 4E0M ORN A 0 ALA L-ORNITHINE MODRES 4E0M ORN A 8 ALA L-ORNITHINE MODRES 4E0M 4BF A 12 TYR 4-BROMO-L-PHENYLALANINE MODRES 4E0M ORN B 0 ALA L-ORNITHINE MODRES 4E0M ORN B 8 ALA L-ORNITHINE MODRES 4E0M 4BF B 12 TYR 4-BROMO-L-PHENYLALANINE MODRES 4E0M ORN C 0 ALA L-ORNITHINE MODRES 4E0M ORN C 8 ALA L-ORNITHINE MODRES 4E0M 4BF C 12 TYR 4-BROMO-L-PHENYLALANINE MODRES 4E0M ORN D 0 ALA L-ORNITHINE MODRES 4E0M ORN D 8 ALA L-ORNITHINE MODRES 4E0M 4BF D 12 TYR 4-BROMO-L-PHENYLALANINE HET ORN A 0 8 HET ORN A 8 8 HET HAO A 11 17 HET 4BF A 12 12 HET ORN B 0 8 HET ORN B 8 8 HET HAO B 11 17 HET 4BF B 12 12 HET ORN C 0 8 HET ORN C 8 8 HET HAO C 11 17 HET 4BF C 12 12 HET ORN D 0 8 HET ORN D 8 8 HET HAO D 11 17 HET 4BF D 12 12 HET PO4 B 101 5 HET PO4 B 102 5 HET PO4 B 103 5 HET MPD C 101 8 HET PO4 C 102 5 HET PO4 C 103 5 HET MPD C 104 8 HET PO4 D 101 5 HET PO4 D 102 5 HETNAM ORN L-ORNITHINE HETNAM HAO {[3-(HYDRAZINOCARBONYL)-4-METHOXYPHENYL]AMINO}(OXO) HETNAM 2 HAO ACETIC ACID HETNAM 4BF 4-BROMO-L-PHENYLALANINE HETNAM PO4 PHOSPHATE ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETSYN 4BF P-BROMO-L-PHENYLALANINE FORMUL 1 ORN 8(C5 H12 N2 O2) FORMUL 1 HAO 4(C10 H11 N3 O5) FORMUL 1 4BF 4(C9 H10 BR N O2) FORMUL 5 PO4 7(O4 P 3-) FORMUL 8 MPD 2(C6 H14 O2) FORMUL 14 HOH *28(H2 O) SHEET 1 A 2 ILE A 4 TYR A 6 0 SHEET 2 A 2 ILE B 4 TYR B 6 -1 O TYR B 6 N ILE A 4 SHEET 1 B 2 ILE C 4 TYR C 6 0 SHEET 2 B 2 ILE D 4 TYR D 6 -1 O ILE D 4 N TYR C 6 LINK C ORN A 0 N SER A 1 1555 1555 1.30 LINK NE ORN A 0 C LYS A 13 1555 1555 1.36 LINK C LYS A 7 NE ORN A 8 1555 1555 1.38 LINK C ORN A 8 N GLU A 9 1555 1555 1.38 LINK C PHE A 10 N HAO A 11 1555 1555 1.35 LINK C HAO A 11 N 4BF A 12 1555 1555 1.35 LINK C 4BF A 12 N LYS A 13 1555 1555 1.35 LINK C ORN B 0 N SER B 1 1555 1555 1.35 LINK NE ORN B 0 C LYS B 13 1555 1555 1.38 LINK C LYS B 7 NE ORN B 8 1555 1555 1.37 LINK C ORN B 8 N GLU B 9 1555 1555 1.40 LINK C PHE B 10 N HAO B 11 1555 1555 1.40 LINK C HAO B 11 N 4BF B 12 1555 1555 1.33 LINK C 4BF B 12 N LYS B 13 1555 1555 1.33 LINK C ORN C 0 N SER C 1 1555 1555 1.37 LINK NE ORN C 0 C LYS C 13 1555 1555 1.34 LINK C LYS C 7 NE ORN C 8 1555 1555 1.37 LINK C ORN C 8 N GLU C 9 1555 1555 1.37 LINK C PHE C 10 N HAO C 11 1555 1555 1.38 LINK C HAO C 11 N 4BF C 12 1555 1555 1.35 LINK C 4BF C 12 N LYS C 13 1555 1555 1.38 LINK C ORN D 0 N SER D 1 1555 1555 1.38 LINK NE ORN D 0 C LYS D 13 1555 1555 1.36 LINK C LYS D 7 NE ORN D 8 1555 1555 1.44 LINK C ORN D 8 N GLU D 9 1555 1555 1.38 LINK C PHE D 10 N HAO D 11 1555 1555 1.40 LINK C HAO D 11 N 4BF D 12 1555 1555 1.35 LINK C 4BF D 12 N LYS D 13 1555 1555 1.40 SITE 1 AC1 10 TYR A 6 ORN A 8 TYR B 6 ORN B 8 SITE 2 AC1 10 PO4 B 102 PO4 B 103 HOH B 203 HOH B 204 SITE 3 AC1 10 HOH B 205 ORN C 8 SITE 1 AC2 4 ORN B 8 PO4 B 101 HOH B 209 ORN C 8 SITE 1 AC3 11 ORN A 8 ORN B 8 PO4 B 101 HOH B 201 SITE 2 AC3 11 HOH B 205 HOH B 211 TYR D 6 ORN D 8 SITE 3 AC3 11 PO4 D 101 PO4 D 102 HOH D 203 SITE 1 AC4 4 LYS B 7 GLN C 3 HAO C 11 PO4 C 103 SITE 1 AC5 8 ORN C 0 SER C 1 HOH C 205 LYS D 7 SITE 2 AC5 8 ORN D 8 PO4 D 101 PO4 D 102 HOH D 201 SITE 1 AC6 10 ORN A 0 SER A 1 LYS B 7 GLN C 3 SITE 2 AC6 10 LYS C 13 MPD C 101 HOH C 203 HOH C 205 SITE 3 AC6 10 LYS D 7 PO4 D 101 SITE 1 AC7 3 PHE C 10 HOH C 202 HAO D 11 SITE 1 AC8 9 ORN B 8 GLU B 9 PO4 B 103 LYS C 13 SITE 2 AC8 9 PO4 C 102 PO4 C 103 LYS D 7 ORN D 8 SITE 3 AC8 9 PO4 D 102 SITE 1 AC9 8 ORN B 8 PO4 B 103 TYR C 6 ORN C 8 SITE 2 AC9 8 PO4 C 102 ORN D 8 PO4 D 101 HOH D 201 CRYST1 58.320 25.340 50.780 90.00 122.19 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017147 0.000000 0.010794 0.00000 SCALE2 0.000000 0.039463 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023270 0.00000 HETATM 1 N ORN A 0 -19.904 -32.586 -14.357 1.00 17.09 N ANISOU 1 N ORN A 0 2526 2227 1739 -319 29 182 N HETATM 2 CA ORN A 0 -20.140 -32.717 -12.919 1.00 14.05 C ANISOU 2 CA ORN A 0 2101 1838 1398 -189 19 161 C HETATM 3 CB ORN A 0 -20.897 -34.027 -12.633 1.00 15.88 C ANISOU 3 CB ORN A 0 2430 2030 1574 -139 -9 203 C HETATM 4 CG ORN A 0 -22.362 -34.032 -13.080 1.00 18.06 C ANISOU 4 CG ORN A 0 2754 2235 1873 -227 -51 343 C HETATM 5 CD ORN A 0 -23.309 -33.125 -12.264 1.00 20.77 C ANISOU 5 CD ORN A 0 3012 2549 2332 -222 -67 385 C HETATM 6 NE ORN A 0 -23.195 -33.325 -10.818 1.00 21.42 N ANISOU 6 NE ORN A 0 3063 2660 2414 -121 -47 314 N HETATM 7 C ORN A 0 -18.790 -32.745 -12.208 1.00 14.29 C ANISOU 7 C ORN A 0 2068 1945 1415 -90 54 33 C HETATM 8 O ORN A 0 -17.749 -32.960 -12.849 1.00 16.09 O ANISOU 8 O ORN A 0 2281 2239 1595 -99 90 -48 O