HEADER MEMBRANE PROTEIN 07-MAR-12 4E29 TITLE PERIPLASMIC DOMAIN OF THE CHIMERIC WZZB CHAIN LENGTH REGULATOR PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHIMERIC WZZB CHAIN LENGTH DETERMINANT PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: PERIPLASMIC DOMAIN; COMPND 5 SYNONYM: POLYSACCHARIDE ANTIGEN CHAIN REGULATOR; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHIGELLA FLEXNERI, SALMONELLA TYPHIMURIUM SOURCE 3 (STRAIN LT2 / SGSC1412 / ATCC 700720); SOURCE 4 ORGANISM_TAXID: 623, 99287; SOURCE 5 GENE: CLD, ROL, S2210, SF2089, WZZB, STM2079; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFO4 KEYWDS WZZ, REGULATION OF LPS O-ANTIGEN CHAIN LENGTH, INNER MEMBRANE, KEYWDS 2 MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.KALYNYCH,D.YAO,J.D.MAGEE,M.CYGLER REVDAT 5 15-NOV-17 4E29 1 REMARK REVDAT 4 05-JUL-17 4E29 1 SOURCE REVDAT 3 20-JUN-12 4E29 1 JRNL REVDAT 2 04-APR-12 4E29 1 JRNL REVDAT 1 28-MAR-12 4E29 0 JRNL AUTH S.KALYNYCH,D.YAO,J.MAGEE,M.CYGLER JRNL TITL STRUCTURAL CHARACTERIZATION OF CLOSELY RELATED O-ANTIGEN JRNL TITL 2 LIPOPOLYSACCHARIDE (LPS) CHAIN LENGTH REGULATORS. JRNL REF J.BIOL.CHEM. V. 287 15696 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 22437828 JRNL DOI 10.1074/JBC.M112.354837 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.4_486 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 90287 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 4557 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.7053 - 3.4459 0.99 9290 480 0.2072 0.2088 REMARK 3 2 3.4459 - 2.7356 1.00 9017 460 0.2198 0.2428 REMARK 3 3 2.7356 - 2.3899 0.99 8894 477 0.2303 0.2596 REMARK 3 4 2.3899 - 2.1714 0.98 8692 475 0.2073 0.2301 REMARK 3 5 2.1714 - 2.0158 0.99 8716 517 0.2078 0.2400 REMARK 3 6 2.0158 - 1.8970 0.95 8404 428 0.2303 0.2496 REMARK 3 7 1.8970 - 1.8020 0.95 8399 433 0.2321 0.2669 REMARK 3 8 1.8020 - 1.7235 0.94 8279 458 0.2286 0.2494 REMARK 3 9 1.7235 - 1.6572 0.92 8094 417 0.2299 0.2553 REMARK 3 10 1.6572 - 1.6000 0.90 7946 412 0.2337 0.2814 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.72 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 51.92 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.39100 REMARK 3 B22 (A**2) : 1.39100 REMARK 3 B33 (A**2) : -2.78200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3562 REMARK 3 ANGLE : 0.923 4844 REMARK 3 CHIRALITY : 0.056 585 REMARK 3 PLANARITY : 0.004 627 REMARK 3 DIHEDRAL : 13.248 1310 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 55:161) REMARK 3 ORIGIN FOR THE GROUP (A): 25.9313 55.7815 29.2888 REMARK 3 T TENSOR REMARK 3 T11: 0.4098 T22: 0.0729 REMARK 3 T33: 0.1996 T12: 0.0271 REMARK 3 T13: -0.2011 T23: -0.0147 REMARK 3 L TENSOR REMARK 3 L11: 0.2495 L22: 0.8299 REMARK 3 L33: 0.5219 L12: 0.3944 REMARK 3 L13: 0.2519 L23: 0.4917 REMARK 3 S TENSOR REMARK 3 S11: 0.0868 S12: -0.0033 S13: -0.0927 REMARK 3 S21: -0.2362 S22: 0.0322 S23: 0.1874 REMARK 3 S31: 0.2360 S32: -0.0177 S33: -0.1080 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 162:291) REMARK 3 ORIGIN FOR THE GROUP (A): 38.5862 44.6418 68.3487 REMARK 3 T TENSOR REMARK 3 T11: 0.1136 T22: 0.0647 REMARK 3 T33: 0.0822 T12: 0.0256 REMARK 3 T13: -0.0417 T23: -0.0108 REMARK 3 L TENSOR REMARK 3 L11: 0.0338 L22: 0.2322 REMARK 3 L33: 0.3246 L12: 0.0317 REMARK 3 L13: 0.1055 L23: -0.0663 REMARK 3 S TENSOR REMARK 3 S11: -0.0310 S12: 0.0131 S13: 0.0479 REMARK 3 S21: -0.1275 S22: -0.0446 S23: 0.0627 REMARK 3 S31: -0.0483 S32: 0.0370 S33: 0.0655 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN B AND RESID 55:160) REMARK 3 ORIGIN FOR THE GROUP (A): 36.9190 34.1943 29.4679 REMARK 3 T TENSOR REMARK 3 T11: 0.1143 T22: 0.1738 REMARK 3 T33: 0.1192 T12: -0.0778 REMARK 3 T13: -0.0080 T23: -0.0664 REMARK 3 L TENSOR REMARK 3 L11: 1.1147 L22: 0.6316 REMARK 3 L33: 1.9091 L12: 0.4121 REMARK 3 L13: 1.2006 L23: 0.9948 REMARK 3 S TENSOR REMARK 3 S11: -0.1644 S12: 0.1844 S13: -0.1606 REMARK 3 S21: -0.1054 S22: 0.3088 S23: -0.0970 REMARK 3 S31: -0.2998 S32: 0.4514 S33: -0.1734 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN B AND RESID 161:289) REMARK 3 ORIGIN FOR THE GROUP (A): 53.3663 34.6774 68.0465 REMARK 3 T TENSOR REMARK 3 T11: 0.0833 T22: 0.1559 REMARK 3 T33: 0.0906 T12: 0.0166 REMARK 3 T13: -0.0101 T23: -0.0332 REMARK 3 L TENSOR REMARK 3 L11: 0.4445 L22: 0.0989 REMARK 3 L33: 1.0277 L12: 0.2395 REMARK 3 L13: 0.8757 L23: 0.3313 REMARK 3 S TENSOR REMARK 3 S11: -0.0590 S12: 0.0916 S13: 0.0043 REMARK 3 S21: -0.0592 S22: 0.0053 S23: 0.0296 REMARK 3 S31: -0.1437 S32: 0.0665 S33: 0.0261 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4E29 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAR-12. REMARK 100 THE DEPOSITION ID IS D_1000071077. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96406 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 90288 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 32.698 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 11.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: AB INITIO PHASING REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NAFORMATE, PH 6.0, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 57.87850 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 57.87850 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 105.44250 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 57.87850 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 57.87850 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 105.44250 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 57.87850 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 57.87850 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 105.44250 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 57.87850 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 57.87850 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 105.44250 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 57.87850 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 57.87850 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 105.44250 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 57.87850 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 57.87850 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 105.44250 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 57.87850 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 57.87850 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 105.44250 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 57.87850 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 57.87850 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 105.44250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 31230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 80520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -130.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 115.75700 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 115.75700 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 115.75700 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 115.75700 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 601 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 680 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 46 REMARK 465 HIS A 47 REMARK 465 HIS A 48 REMARK 465 HIS A 49 REMARK 465 HIS A 50 REMARK 465 HIS A 51 REMARK 465 GLY A 52 REMARK 465 SER A 53 REMARK 465 GLU A 54 REMARK 465 ASN A 127 REMARK 465 GLN A 128 REMARK 465 GLN A 129 REMARK 465 LEU A 130 REMARK 465 PRO A 292 REMARK 465 LYS A 293 REMARK 465 HIS B 46 REMARK 465 HIS B 47 REMARK 465 HIS B 48 REMARK 465 HIS B 49 REMARK 465 HIS B 50 REMARK 465 HIS B 51 REMARK 465 GLY B 52 REMARK 465 SER B 53 REMARK 465 GLU B 54 REMARK 465 VAL B 125 REMARK 465 LYS B 126 REMARK 465 ASN B 127 REMARK 465 GLN B 128 REMARK 465 GLN B 129 REMARK 465 ASP B 290 REMARK 465 SER B 291 REMARK 465 PRO B 292 REMARK 465 LYS B 293 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 55 CG CD CE NZ REMARK 470 GLN A 69 CG CD OE1 NE2 REMARK 470 MSE A 77 CG SE CE REMARK 470 GLN A 83 CG CD OE1 NE2 REMARK 470 LYS A 87 CG CD CE NZ REMARK 470 GLU A 93 CG CD OE1 OE2 REMARK 470 GLU A 108 CG CD OE1 OE2 REMARK 470 GLU A 114 CG CD OE1 OE2 REMARK 470 GLU A 115 CG CD OE1 OE2 REMARK 470 LYS A 118 CE NZ REMARK 470 LYS A 126 C O CG CD CE NZ REMARK 470 GLN A 139 CG CD OE1 NE2 REMARK 470 GLU A 142 CG CD OE1 OE2 REMARK 470 ARG A 165 CZ NH2 REMARK 470 LYS A 176 NZ REMARK 470 ARG A 183 NH1 REMARK 470 GLU A 186 OE2 REMARK 470 GLU A 191 OE1 REMARK 470 GLN A 218 CD OE1 NE2 REMARK 470 MSE A 228 CG SE CE REMARK 470 MSE A 239 SE CE REMARK 470 GLN A 241 CD OE1 NE2 REMARK 470 GLU A 243 OE1 OE2 REMARK 470 GLN A 256 CG CD OE1 NE2 REMARK 470 THR A 260 CG2 REMARK 470 LEU A 261 CD1 REMARK 470 ASP A 263 CG OD1 OD2 REMARK 470 ILE A 264 CG1 CG2 CD1 REMARK 470 LYS A 265 CG CD CE NZ REMARK 470 LYS A 268 CG CD CE NZ REMARK 470 ASP A 272 OD2 REMARK 470 LYS A 282 NZ REMARK 470 ARG A 288 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 289 CG CD NE CZ NH1 NH2 REMARK 470 SER A 291 OG REMARK 470 LYS B 55 CG CD CE NZ REMARK 470 GLN B 83 CG CD OE1 NE2 REMARK 470 LYS B 87 CG CD CE NZ REMARK 470 GLU B 108 N CG CD OE1 OE2 REMARK 470 GLN B 113 NE2 REMARK 470 GLU B 114 CG CD OE1 OE2 REMARK 470 GLU B 115 CG CD OE1 OE2 REMARK 470 GLU B 122 CG CD OE1 OE2 REMARK 470 LEU B 130 N CG CD1 CD2 REMARK 470 GLN B 139 CG CD OE1 NE2 REMARK 470 LYS B 158 NZ REMARK 470 GLU B 186 OE1 REMARK 470 GLU B 191 OE1 REMARK 470 GLN B 216 OE1 REMARK 470 GLN B 218 OE1 NE2 REMARK 470 GLN B 221 NE2 REMARK 470 ASP B 222 N CG OD1 OD2 REMARK 470 MSE B 239 CG SE CE REMARK 470 GLN B 241 CD OE1 NE2 REMARK 470 LYS B 268 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP B 56 116.12 32.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3B8P RELATED DB: PDB REMARK 900 SALMONELLA TYPHIMURIUM WZZB REMARK 900 RELATED ID: 3B8M RELATED DB: PDB REMARK 900 FEPE LPS O-ANTIGEN CHAIN LENGTH REGULATOR REMARK 900 RELATED ID: 3B80 RELATED DB: PDB REMARK 900 WZZE POLYSACCHARRIDE CO-POLYMERASE REMARK 900 RELATED ID: 4E2C RELATED DB: PDB REMARK 900 RELATED ID: 4E2H RELATED DB: PDB REMARK 900 RELATED ID: 4E2L RELATED DB: PDB DBREF 4E29 A 54 200 UNP P37792 WZZB_SHIFL 54 200 DBREF 4E29 A 201 293 UNP Q04866 WZZB_SALTY 201 293 DBREF 4E29 B 54 200 UNP P37792 WZZB_SHIFL 54 200 DBREF 4E29 B 201 293 UNP Q04866 WZZB_SALTY 201 293 SEQADV 4E29 HIS A 46 UNP P37792 EXPRESSION TAG SEQADV 4E29 HIS A 47 UNP P37792 EXPRESSION TAG SEQADV 4E29 HIS A 48 UNP P37792 EXPRESSION TAG SEQADV 4E29 HIS A 49 UNP P37792 EXPRESSION TAG SEQADV 4E29 HIS A 50 UNP P37792 EXPRESSION TAG SEQADV 4E29 HIS A 51 UNP P37792 EXPRESSION TAG SEQADV 4E29 GLY A 52 UNP P37792 EXPRESSION TAG SEQADV 4E29 SER A 53 UNP P37792 EXPRESSION TAG SEQADV 4E29 ARG A 165 UNP P37792 LYS 165 CONFLICT SEQADV 4E29 ALA A 249 UNP Q04866 VAL 249 CONFLICT SEQADV 4E29 HIS B 46 UNP P37792 EXPRESSION TAG SEQADV 4E29 HIS B 47 UNP P37792 EXPRESSION TAG SEQADV 4E29 HIS B 48 UNP P37792 EXPRESSION TAG SEQADV 4E29 HIS B 49 UNP P37792 EXPRESSION TAG SEQADV 4E29 HIS B 50 UNP P37792 EXPRESSION TAG SEQADV 4E29 HIS B 51 UNP P37792 EXPRESSION TAG SEQADV 4E29 GLY B 52 UNP P37792 EXPRESSION TAG SEQADV 4E29 SER B 53 UNP P37792 EXPRESSION TAG SEQADV 4E29 ARG B 165 UNP P37792 LYS 165 CONFLICT SEQADV 4E29 ALA B 249 UNP Q04866 VAL 249 CONFLICT SEQRES 1 A 248 HIS HIS HIS HIS HIS HIS GLY SER GLU LYS TRP THR SER SEQRES 2 A 248 THR ALA ILE ILE THR GLN PRO ASP VAL GLY GLN ILE ALA SEQRES 3 A 248 GLY TYR ASN ASN ALA MSE ASN VAL ILE TYR GLY GLN ALA SEQRES 4 A 248 ALA PRO LYS VAL SER ASP LEU GLN GLU THR LEU ILE GLY SEQRES 5 A 248 ARG PHE SER SER ALA PHE SER ALA LEU ALA GLU THR LEU SEQRES 6 A 248 ASP ASN GLN GLU GLU PRO GLU LYS LEU THR ILE GLU PRO SEQRES 7 A 248 SER VAL LYS ASN GLN GLN LEU PRO LEU THR VAL SER TYR SEQRES 8 A 248 VAL GLY GLN THR ALA GLU GLY ALA GLN MSE LYS LEU ALA SEQRES 9 A 248 GLN TYR ILE GLN GLN VAL ASP ASP LYS VAL ASN GLN GLU SEQRES 10 A 248 LEU GLU ARG ASP LEU LYS ASP ASN ILE ALA LEU GLY ARG SEQRES 11 A 248 LYS ASN LEU GLN ASP SER LEU ARG THR GLN GLU VAL VAL SEQRES 12 A 248 ALA GLN GLU GLN LYS ASP LEU ARG ILE ARG GLN ILE GLU SEQRES 13 A 248 GLU ALA LEU ARG TYR ALA ASP GLU ALA LYS ILE THR GLN SEQRES 14 A 248 PRO GLN ILE GLN GLN THR GLN ASP VAL THR GLN ASP THR SEQRES 15 A 248 MSE PHE LEU LEU GLY SER ASP ALA LEU LYS SER MSE ILE SEQRES 16 A 248 GLN ASN GLU ALA THR ARG PRO LEU ALA PHE SER PRO ALA SEQRES 17 A 248 TYR TYR GLN THR LYS GLN THR LEU LEU ASP ILE LYS ASN SEQRES 18 A 248 LEU LYS VAL THR ALA ASP THR VAL HIS VAL TYR ARG TYR SEQRES 19 A 248 VAL MSE LYS PRO THR LEU PRO VAL ARG ARG ASP SER PRO SEQRES 20 A 248 LYS SEQRES 1 B 248 HIS HIS HIS HIS HIS HIS GLY SER GLU LYS TRP THR SER SEQRES 2 B 248 THR ALA ILE ILE THR GLN PRO ASP VAL GLY GLN ILE ALA SEQRES 3 B 248 GLY TYR ASN ASN ALA MSE ASN VAL ILE TYR GLY GLN ALA SEQRES 4 B 248 ALA PRO LYS VAL SER ASP LEU GLN GLU THR LEU ILE GLY SEQRES 5 B 248 ARG PHE SER SER ALA PHE SER ALA LEU ALA GLU THR LEU SEQRES 6 B 248 ASP ASN GLN GLU GLU PRO GLU LYS LEU THR ILE GLU PRO SEQRES 7 B 248 SER VAL LYS ASN GLN GLN LEU PRO LEU THR VAL SER TYR SEQRES 8 B 248 VAL GLY GLN THR ALA GLU GLY ALA GLN MSE LYS LEU ALA SEQRES 9 B 248 GLN TYR ILE GLN GLN VAL ASP ASP LYS VAL ASN GLN GLU SEQRES 10 B 248 LEU GLU ARG ASP LEU LYS ASP ASN ILE ALA LEU GLY ARG SEQRES 11 B 248 LYS ASN LEU GLN ASP SER LEU ARG THR GLN GLU VAL VAL SEQRES 12 B 248 ALA GLN GLU GLN LYS ASP LEU ARG ILE ARG GLN ILE GLU SEQRES 13 B 248 GLU ALA LEU ARG TYR ALA ASP GLU ALA LYS ILE THR GLN SEQRES 14 B 248 PRO GLN ILE GLN GLN THR GLN ASP VAL THR GLN ASP THR SEQRES 15 B 248 MSE PHE LEU LEU GLY SER ASP ALA LEU LYS SER MSE ILE SEQRES 16 B 248 GLN ASN GLU ALA THR ARG PRO LEU ALA PHE SER PRO ALA SEQRES 17 B 248 TYR TYR GLN THR LYS GLN THR LEU LEU ASP ILE LYS ASN SEQRES 18 B 248 LEU LYS VAL THR ALA ASP THR VAL HIS VAL TYR ARG TYR SEQRES 19 B 248 VAL MSE LYS PRO THR LEU PRO VAL ARG ARG ASP SER PRO SEQRES 20 B 248 LYS MODRES 4E29 MSE A 77 MET SELENOMETHIONINE MODRES 4E29 MSE A 146 MET SELENOMETHIONINE MODRES 4E29 MSE A 228 MET SELENOMETHIONINE MODRES 4E29 MSE A 239 MET SELENOMETHIONINE MODRES 4E29 MSE A 281 MET SELENOMETHIONINE MODRES 4E29 MSE B 77 MET SELENOMETHIONINE MODRES 4E29 MSE B 146 MET SELENOMETHIONINE MODRES 4E29 MSE B 228 MET SELENOMETHIONINE MODRES 4E29 MSE B 239 MET SELENOMETHIONINE MODRES 4E29 MSE B 281 MET SELENOMETHIONINE HET MSE A 77 5 HET MSE A 146 8 HET MSE A 228 5 HET MSE A 239 6 HET MSE A 281 8 HET MSE B 77 8 HET MSE B 146 8 HET MSE B 228 8 HET MSE B 239 5 HET MSE B 281 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 3 HOH *790(H2 O) HELIX 1 1 VAL A 67 GLN A 69 5 3 HELIX 2 2 ILE A 70 GLY A 82 1 13 HELIX 3 3 GLN A 83 ALA A 85 5 3 HELIX 4 4 LYS A 87 ASN A 112 1 26 HELIX 5 5 THR A 140 LYS A 211 1 72 HELIX 6 6 THR A 227 LEU A 231 5 5 HELIX 7 7 GLY A 232 ASN A 242 1 11 HELIX 8 8 GLU A 243 ARG A 246 5 4 HELIX 9 9 SER A 251 LEU A 267 1 17 HELIX 10 10 VAL B 67 GLN B 69 5 3 HELIX 11 11 ILE B 70 GLY B 82 1 13 HELIX 12 12 GLN B 83 ALA B 85 5 3 HELIX 13 13 LYS B 87 ALA B 107 1 21 HELIX 14 14 THR B 109 ASN B 112 1 4 HELIX 15 15 THR B 140 LYS B 211 1 72 HELIX 16 16 THR B 227 LEU B 231 5 5 HELIX 17 17 GLY B 232 ASN B 242 1 11 HELIX 18 18 GLU B 243 ARG B 246 5 4 HELIX 19 19 SER B 251 LEU B 267 1 17 SHEET 1 A 4 LYS A 118 PRO A 123 0 SHEET 2 A 4 LEU A 132 GLY A 138 -1 O THR A 133 N GLU A 122 SHEET 3 A 4 TRP A 56 THR A 63 -1 N ILE A 62 O LEU A 132 SHEET 4 A 4 ARG A 278 MSE A 281 -1 O VAL A 280 N ILE A 61 SHEET 1 B 4 LYS B 118 PRO B 123 0 SHEET 2 B 4 LEU B 132 VAL B 137 -1 O THR B 133 N GLU B 122 SHEET 3 B 4 THR B 57 THR B 63 -1 N ILE B 62 O LEU B 132 SHEET 4 B 4 ARG B 278 MSE B 281 -1 O VAL B 280 N ILE B 61 LINK C ALA A 76 N MSE A 77 1555 1555 1.33 LINK C MSE A 77 N ASN A 78 1555 1555 1.33 LINK C GLN A 145 N MSE A 146 1555 1555 1.33 LINK C MSE A 146 N LYS A 147 1555 1555 1.33 LINK C THR A 227 N MSE A 228 1555 1555 1.34 LINK C MSE A 228 N PHE A 229 1555 1555 1.33 LINK C SER A 238 N MSE A 239 1555 1555 1.33 LINK C MSE A 239 N ILE A 240 1555 1555 1.33 LINK C VAL A 280 N MSE A 281 1555 1555 1.33 LINK C MSE A 281 N LYS A 282 1555 1555 1.33 LINK C ALA B 76 N MSE B 77 1555 1555 1.33 LINK C MSE B 77 N ASN B 78 1555 1555 1.33 LINK C GLN B 145 N MSE B 146 1555 1555 1.33 LINK C MSE B 146 N LYS B 147 1555 1555 1.33 LINK C THR B 227 N MSE B 228 1555 1555 1.34 LINK C MSE B 228 N PHE B 229 1555 1555 1.33 LINK C SER B 238 N MSE B 239 1555 1555 1.33 LINK C MSE B 239 N ILE B 240 1555 1555 1.33 LINK C VAL B 280 N MSE B 281 1555 1555 1.33 LINK C MSE B 281 N LYS B 282 1555 1555 1.33 CRYST1 115.757 115.757 210.885 90.00 90.00 90.00 I 4 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008639 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008639 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004742 0.00000