HEADER OXIDOREDUCTASE 11-MAR-12 4E3Z TITLE CRYSTAL STRUCTURE OF A OXIDOREDUCTASE FROM RHIZOBIUM ETLI CFN 42 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE OXIDOREDUCTASE PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHIZOBIUM ETLI; SOURCE 3 ORGANISM_TAXID: 347834; SOURCE 4 STRAIN: CFN 42; SOURCE 5 GENE: RHE_CH03884; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS PSI-BIOLOGY, STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 NYSGRC,OXIDOREDUCTASE, NEW YORK STRUCTURAL GENOMICS RESEARCH KEYWDS 3 CONSORTIUM, ROSSMANN FOLD, NAD(P) BINDING SITE, OXIDOREDUCTASE, KEYWDS 4 SHORT CHAIN DEHYDROGENASE, EXPDTA X-RAY DIFFRACTION AUTHOR D.KUMARAN,S.CHAMALA,B.EVANS,R.FOTI,A.GIZZI,B.HILLERICH,A.KAR, AUTHOR 2 J.LAFLEUR,R.SEIDEL,G.VILLIGAS,W.ZENCHECK,S.C.ALMO,S.SWAMINATHAN,NEW AUTHOR 3 YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NYSGRC) REVDAT 1 21-MAR-12 4E3Z 0 JRNL AUTH D.KUMARAN,S.C.ALMO,S.SWAMINATHAN JRNL TITL CRYSTAL STRUCTURE OF A OXIDOREDUCTASE FROM RHIZOBIUM ETLI JRNL TITL 2 CFN 42 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 32074 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1714 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2225 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.1630 REMARK 3 BIN FREE R VALUE SET COUNT : 97 REMARK 3 BIN FREE R VALUE : 0.2160 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3320 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 286 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.58000 REMARK 3 B22 (A**2) : -0.58000 REMARK 3 B33 (A**2) : 0.87000 REMARK 3 B12 (A**2) : -0.29000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.152 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.147 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.089 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.069 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3354 ; 0.021 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4549 ; 2.000 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 455 ; 6.401 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 135 ;35.189 ;22.741 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 481 ;15.461 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;20.486 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 539 ; 0.137 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2540 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4E3Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAR-12. REMARK 100 THE RCSB ID CODE IS RCSB071139. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI II REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33802 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.500 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.21000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, SHELXE & ARP/WARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MAGNESIUM CHLORIDE 0.1M TRIS REMARK 280 25% PEG 3350 5% GLYCEROL, PH 8.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 17.22067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.44133 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 34.44133 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 17.22067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -79.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 MSE A 1 REMARK 465 THR A 194 REMARK 465 ASP A 195 REMARK 465 LEU A 196 REMARK 465 HIS A 197 REMARK 465 ALA A 198 REMARK 465 SER A 199 REMARK 465 GLY A 200 REMARK 465 GLY A 201 REMARK 465 LEU A 202 REMARK 465 PRO A 203 REMARK 465 ASP A 204 REMARK 465 ARG A 205 REMARK 465 ALA A 206 REMARK 465 ARG A 207 REMARK 465 GLU A 208 REMARK 465 MSE A 209 REMARK 465 ALA A 210 REMARK 465 PRO A 211 REMARK 465 MSE B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 SER B -14 REMARK 465 SER B -13 REMARK 465 GLY B -12 REMARK 465 VAL B -11 REMARK 465 ASP B -10 REMARK 465 LEU B -9 REMARK 465 GLY B -8 REMARK 465 THR B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 SER B 0 REMARK 465 MSE B 1 REMARK 465 SER B 2 REMARK 465 ASP B 3 REMARK 465 THR B 194 REMARK 465 ASP B 195 REMARK 465 LEU B 196 REMARK 465 HIS B 197 REMARK 465 ALA B 198 REMARK 465 SER B 199 REMARK 465 GLY B 200 REMARK 465 GLY B 201 REMARK 465 LEU B 202 REMARK 465 PRO B 203 REMARK 465 ASP B 204 REMARK 465 ARG B 205 REMARK 465 ALA B 206 REMARK 465 ARG B 207 REMARK 465 GLU B 208 REMARK 465 MSE B 209 REMARK 465 ALA B 210 REMARK 465 PRO B 211 REMARK 465 SER B 212 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 22 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 22 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG A 109 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 109 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG A 127 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG A 127 NE - CZ - NH2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG B 78 NE - CZ - NH1 ANGL. DEV. = 7.1 DEGREES REMARK 500 ARG B 78 NE - CZ - NH2 ANGL. DEV. = -8.5 DEGREES REMARK 500 ARG B 127 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 115 -65.13 -99.13 REMARK 500 SER A 144 -137.78 -102.25 REMARK 500 GLN A 155 -65.77 -123.03 REMARK 500 TYR A 156 70.47 -160.05 REMARK 500 ALA B 37 -108.29 -135.58 REMARK 500 VAL B 115 -69.39 -102.22 REMARK 500 SER B 134 35.45 39.40 REMARK 500 SER B 144 -137.62 -99.04 REMARK 500 THR B 154 -2.80 74.98 REMARK 500 TYR B 156 70.67 -155.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGRC-014458 RELATED DB: TARGETTRACK DBREF 4E3Z A 1 250 UNP Q2K3F6 Q2K3F6_RHIEC 1 250 DBREF 4E3Z B 1 250 UNP Q2K3F6 Q2K3F6_RHIEC 1 250 SEQADV 4E3Z MSE A -21 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z HIS A -20 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z HIS A -19 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z HIS A -18 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z HIS A -17 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z HIS A -16 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z HIS A -15 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z SER A -14 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z SER A -13 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z GLY A -12 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z VAL A -11 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z ASP A -10 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z LEU A -9 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z GLY A -8 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z THR A -7 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z GLU A -6 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z ASN A -5 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z LEU A -4 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z TYR A -3 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z PHE A -2 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z GLN A -1 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z SER A 0 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z MSE B -21 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z HIS B -20 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z HIS B -19 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z HIS B -18 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z HIS B -17 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z HIS B -16 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z HIS B -15 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z SER B -14 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z SER B -13 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z GLY B -12 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z VAL B -11 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z ASP B -10 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z LEU B -9 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z GLY B -8 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z THR B -7 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z GLU B -6 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z ASN B -5 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z LEU B -4 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z TYR B -3 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z PHE B -2 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z GLN B -1 UNP Q2K3F6 EXPRESSION TAG SEQADV 4E3Z SER B 0 UNP Q2K3F6 EXPRESSION TAG SEQRES 1 A 272 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 272 GLY THR GLU ASN LEU TYR PHE GLN SER MSE SER ASP THR SEQRES 3 A 272 PRO VAL VAL LEU VAL THR GLY GLY SER ARG GLY ILE GLY SEQRES 4 A 272 ALA ALA VAL CYS ARG LEU ALA ALA ARG GLN GLY TRP ARG SEQRES 5 A 272 VAL GLY VAL ASN TYR ALA ALA ASN ARG GLU ALA ALA ASP SEQRES 6 A 272 ALA VAL VAL ALA ALA ILE THR GLU SER GLY GLY GLU ALA SEQRES 7 A 272 VAL ALA ILE PRO GLY ASP VAL GLY ASN ALA ALA ASP ILE SEQRES 8 A 272 ALA ALA MSE PHE SER ALA VAL ASP ARG GLN PHE GLY ARG SEQRES 9 A 272 LEU ASP GLY LEU VAL ASN ASN ALA GLY ILE VAL ASP TYR SEQRES 10 A 272 PRO GLN ARG VAL ASP GLU MSE SER VAL GLU ARG ILE GLU SEQRES 11 A 272 ARG MSE LEU ARG VAL ASN VAL THR GLY SER ILE LEU CYS SEQRES 12 A 272 ALA ALA GLU ALA VAL ARG ARG MSE SER ARG LEU TYR SER SEQRES 13 A 272 GLY GLN GLY GLY ALA ILE VAL ASN VAL SER SER MSE ALA SEQRES 14 A 272 ALA ILE LEU GLY SER ALA THR GLN TYR VAL ASP TYR ALA SEQRES 15 A 272 ALA SER LYS ALA ALA ILE ASP THR PHE THR ILE GLY LEU SEQRES 16 A 272 ALA ARG GLU VAL ALA ALA GLU GLY ILE ARG VAL ASN ALA SEQRES 17 A 272 VAL ARG PRO GLY ILE ILE GLU THR ASP LEU HIS ALA SER SEQRES 18 A 272 GLY GLY LEU PRO ASP ARG ALA ARG GLU MSE ALA PRO SER SEQRES 19 A 272 VAL PRO MSE GLN ARG ALA GLY MSE PRO GLU GLU VAL ALA SEQRES 20 A 272 ASP ALA ILE LEU TYR LEU LEU SER PRO SER ALA SER TYR SEQRES 21 A 272 VAL THR GLY SER ILE LEU ASN VAL SER GLY GLY ARG SEQRES 1 B 272 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 272 GLY THR GLU ASN LEU TYR PHE GLN SER MSE SER ASP THR SEQRES 3 B 272 PRO VAL VAL LEU VAL THR GLY GLY SER ARG GLY ILE GLY SEQRES 4 B 272 ALA ALA VAL CYS ARG LEU ALA ALA ARG GLN GLY TRP ARG SEQRES 5 B 272 VAL GLY VAL ASN TYR ALA ALA ASN ARG GLU ALA ALA ASP SEQRES 6 B 272 ALA VAL VAL ALA ALA ILE THR GLU SER GLY GLY GLU ALA SEQRES 7 B 272 VAL ALA ILE PRO GLY ASP VAL GLY ASN ALA ALA ASP ILE SEQRES 8 B 272 ALA ALA MSE PHE SER ALA VAL ASP ARG GLN PHE GLY ARG SEQRES 9 B 272 LEU ASP GLY LEU VAL ASN ASN ALA GLY ILE VAL ASP TYR SEQRES 10 B 272 PRO GLN ARG VAL ASP GLU MSE SER VAL GLU ARG ILE GLU SEQRES 11 B 272 ARG MSE LEU ARG VAL ASN VAL THR GLY SER ILE LEU CYS SEQRES 12 B 272 ALA ALA GLU ALA VAL ARG ARG MSE SER ARG LEU TYR SER SEQRES 13 B 272 GLY GLN GLY GLY ALA ILE VAL ASN VAL SER SER MSE ALA SEQRES 14 B 272 ALA ILE LEU GLY SER ALA THR GLN TYR VAL ASP TYR ALA SEQRES 15 B 272 ALA SER LYS ALA ALA ILE ASP THR PHE THR ILE GLY LEU SEQRES 16 B 272 ALA ARG GLU VAL ALA ALA GLU GLY ILE ARG VAL ASN ALA SEQRES 17 B 272 VAL ARG PRO GLY ILE ILE GLU THR ASP LEU HIS ALA SER SEQRES 18 B 272 GLY GLY LEU PRO ASP ARG ALA ARG GLU MSE ALA PRO SER SEQRES 19 B 272 VAL PRO MSE GLN ARG ALA GLY MSE PRO GLU GLU VAL ALA SEQRES 20 B 272 ASP ALA ILE LEU TYR LEU LEU SER PRO SER ALA SER TYR SEQRES 21 B 272 VAL THR GLY SER ILE LEU ASN VAL SER GLY GLY ARG MODRES 4E3Z MSE A 72 MET SELENOMETHIONINE MODRES 4E3Z MSE A 102 MET SELENOMETHIONINE MODRES 4E3Z MSE A 110 MET SELENOMETHIONINE MODRES 4E3Z MSE A 129 MET SELENOMETHIONINE MODRES 4E3Z MSE A 146 MET SELENOMETHIONINE MODRES 4E3Z MSE A 215 MET SELENOMETHIONINE MODRES 4E3Z MSE A 220 MET SELENOMETHIONINE MODRES 4E3Z MSE B 72 MET SELENOMETHIONINE MODRES 4E3Z MSE B 102 MET SELENOMETHIONINE MODRES 4E3Z MSE B 110 MET SELENOMETHIONINE MODRES 4E3Z MSE B 129 MET SELENOMETHIONINE MODRES 4E3Z MSE B 146 MET SELENOMETHIONINE MODRES 4E3Z MSE B 215 MET SELENOMETHIONINE MODRES 4E3Z MSE B 220 MET SELENOMETHIONINE HET MSE A 72 8 HET MSE A 102 8 HET MSE A 110 8 HET MSE A 129 8 HET MSE A 146 8 HET MSE A 215 8 HET MSE A 220 8 HET MSE B 72 8 HET MSE B 102 8 HET MSE B 110 8 HET MSE B 129 8 HET MSE B 146 8 HET MSE B 215 8 HET MSE B 220 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 3 HOH *286(H2 O) HELIX 1 1 ARG A 14 GLN A 27 1 14 HELIX 2 2 ASN A 38 SER A 52 1 15 HELIX 3 3 ASN A 65 GLY A 81 1 17 HELIX 4 4 ARG A 98 MSE A 102 5 5 HELIX 5 5 SER A 103 VAL A 115 1 13 HELIX 6 6 VAL A 115 SER A 130 1 16 HELIX 7 7 ARG A 131 SER A 134 5 4 HELIX 8 8 MSE A 146 GLY A 151 1 6 HELIX 9 9 TYR A 156 ALA A 178 1 23 HELIX 10 10 MSE A 220 SER A 233 1 14 HELIX 11 11 PRO A 234 SER A 237 5 4 HELIX 12 12 ARG B 14 GLN B 27 1 14 HELIX 13 13 ARG B 39 SER B 52 1 14 HELIX 14 14 ASN B 65 GLY B 81 1 17 HELIX 15 15 ARG B 98 MSE B 102 5 5 HELIX 16 16 SER B 103 VAL B 115 1 13 HELIX 17 17 VAL B 115 SER B 130 1 16 HELIX 18 18 ARG B 131 SER B 134 5 4 HELIX 19 19 MSE B 146 GLY B 151 1 6 HELIX 20 20 TYR B 156 ALA B 178 1 23 HELIX 21 21 MSE B 220 SER B 233 1 14 HELIX 22 22 PRO B 234 SER B 237 5 4 SHEET 1 A 7 GLU A 55 PRO A 60 0 SHEET 2 A 7 ARG A 30 TYR A 35 1 N VAL A 33 O VAL A 57 SHEET 3 A 7 VAL A 6 VAL A 9 1 N VAL A 7 O GLY A 32 SHEET 4 A 7 GLY A 85 ASN A 88 1 O VAL A 87 N LEU A 8 SHEET 5 A 7 GLY A 138 VAL A 143 1 O VAL A 141 N LEU A 86 SHEET 6 A 7 ILE A 182 PRO A 189 1 O ASN A 185 N ASN A 142 SHEET 7 A 7 ILE A 243 VAL A 246 1 O VAL A 246 N ARG A 188 SHEET 1 B 7 ALA B 56 PRO B 60 0 SHEET 2 B 7 ARG B 30 TYR B 35 1 N VAL B 33 O VAL B 57 SHEET 3 B 7 VAL B 6 VAL B 9 1 N VAL B 9 O GLY B 32 SHEET 4 B 7 GLY B 85 ASN B 88 1 O VAL B 87 N LEU B 8 SHEET 5 B 7 GLY B 138 VAL B 143 1 O VAL B 141 N LEU B 86 SHEET 6 B 7 ILE B 182 PRO B 189 1 O ARG B 183 N ILE B 140 SHEET 7 B 7 ILE B 243 VAL B 246 1 O VAL B 246 N ARG B 188 LINK C ALA A 71 N MSE A 72 1555 1555 1.35 LINK C MSE A 72 N PHE A 73 1555 1555 1.33 LINK C GLU A 101 N MSE A 102 1555 1555 1.34 LINK C MSE A 102 N SER A 103 1555 1555 1.33 LINK C ARG A 109 N MSE A 110 1555 1555 1.33 LINK C MSE A 110 N LEU A 111 1555 1555 1.33 LINK C ARG A 128 N MSE A 129 1555 1555 1.33 LINK C MSE A 129 N SER A 130 1555 1555 1.33 LINK C SER A 145 N MSE A 146 1555 1555 1.35 LINK C MSE A 146 N ALA A 147 1555 1555 1.34 LINK C PRO A 214 N MSE A 215 1555 1555 1.34 LINK C MSE A 215 N GLN A 216 1555 1555 1.34 LINK C GLY A 219 N MSE A 220 1555 1555 1.32 LINK C MSE A 220 N PRO A 221 1555 1555 1.34 LINK C ALA B 71 N MSE B 72 1555 1555 1.35 LINK C MSE B 72 N PHE B 73 1555 1555 1.35 LINK C GLU B 101 N MSE B 102 1555 1555 1.35 LINK C MSE B 102 N SER B 103 1555 1555 1.33 LINK C ARG B 109 N MSE B 110 1555 1555 1.33 LINK C MSE B 110 N LEU B 111 1555 1555 1.34 LINK C ARG B 128 N MSE B 129 1555 1555 1.33 LINK C MSE B 129 N SER B 130 1555 1555 1.33 LINK C SER B 145 N MSE B 146 1555 1555 1.34 LINK C MSE B 146 N ALA B 147 1555 1555 1.34 LINK C PRO B 214 N MSE B 215 1555 1555 1.35 LINK C MSE B 215 N GLN B 216 1555 1555 1.33 LINK C GLY B 219 N MSE B 220 1555 1555 1.34 LINK C MSE B 220 N PRO B 221 1555 1555 1.35 CRYST1 129.431 129.431 51.662 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007726 0.004461 0.000000 0.00000 SCALE2 0.000000 0.008921 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019357 0.00000