HEADER OXIDOREDUCTASE 15-MAR-12 4E5Y TITLE STRUCTURE OF HUMAN FX PROTEIN, THE KEY ENZYME IN THE BIOSYNTHESIS OF TITLE 2 GDP-L-FUCOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GDP-L-FUCOSE SYNTHASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: GDP-4-KETO-6-DEOXY-D-MANNOSE-3,5-EPIMERASE-4-REDUCTASE, COMPND 5 PROTEIN FX, RED CELL NADP(H)-BINDING PROTEIN, SHORT-CHAIN COMPND 6 DEHYDROGENASE/REDUCTASE FAMILY 4E MEMBER 1; COMPND 7 EC: 1.1.1.271; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TSTA3, SDR4E1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BIOSYNTHESIS, GDP-L-FUCOSE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR H.ZHOU,J.H.HE REVDAT 2 20-MAR-24 4E5Y 1 REMARK REVDAT 1 17-APR-13 4E5Y 0 JRNL AUTH H.ZHOU,J.H.HE JRNL TITL STRUCTURE OF HUMAN FX PROTEIN, THE KEY ENZYME IN THE JRNL TITL 2 BIOSYNTHESIS OF GDP-L-FUCOSE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.37 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.2_432) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.37 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 3 NUMBER OF REFLECTIONS : 63005 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.234 REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.292 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1862 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.2721 - 5.1020 0.99 6808 213 0.2119 0.2416 REMARK 3 2 5.1020 - 4.0510 0.99 6549 197 0.1947 0.2360 REMARK 3 3 4.0510 - 3.5393 0.99 6472 198 0.2252 0.2841 REMARK 3 4 3.5393 - 3.2158 0.98 6361 192 0.2490 0.3401 REMARK 3 5 3.2158 - 2.9854 0.96 6267 182 0.2596 0.3261 REMARK 3 6 2.9854 - 2.8095 0.94 6102 192 0.2718 0.3162 REMARK 3 7 2.8095 - 2.6688 0.92 5945 185 0.2553 0.3423 REMARK 3 8 2.6688 - 2.5526 0.89 5769 170 0.2590 0.3460 REMARK 3 9 2.5526 - 2.4544 0.86 5503 162 0.2686 0.3904 REMARK 3 10 2.4544 - 2.3697 0.83 5367 171 0.2634 0.3871 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 32.50 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.410 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 15.26060 REMARK 3 B22 (A**2) : -7.83490 REMARK 3 B33 (A**2) : -7.42560 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 10132 REMARK 3 ANGLE : 1.366 13771 REMARK 3 CHIRALITY : 0.103 1511 REMARK 3 PLANARITY : 0.006 1745 REMARK 3 DIHEDRAL : 24.539 3853 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4E5Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-APR-12. REMARK 100 THE DEPOSITION ID IS D_1000071210. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAY-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97883 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67223 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.370 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.37 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.41 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM TRIS PH 8.0, 30% PEG 2000, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.88600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.92450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 68.22000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.92450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.88600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 68.22000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 GLU A 3 REMARK 465 PRO A 4 REMARK 465 GLN A 5 REMARK 465 GLY A 6 REMARK 465 LEU A 33 REMARK 465 PRO A 34 REMARK 465 GLY A 35 REMARK 465 THR A 273 REMARK 465 THR A 274 REMARK 465 LYS A 275 REMARK 465 SER A 276 REMARK 465 ASP A 277 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 GLU B 3 REMARK 465 PRO B 4 REMARK 465 GLN B 5 REMARK 465 GLY B 6 REMARK 465 LEU B 33 REMARK 465 PRO B 34 REMARK 465 GLY B 35 REMARK 465 ALA B 204 REMARK 465 GLU B 268 REMARK 465 GLY B 278 REMARK 465 MET C 1 REMARK 465 GLY C 2 REMARK 465 GLU C 3 REMARK 465 PRO C 4 REMARK 465 GLN C 5 REMARK 465 GLY C 6 REMARK 465 LEU C 33 REMARK 465 PRO C 34 REMARK 465 GLY C 35 REMARK 465 GLY C 75 REMARK 465 LEU C 76 REMARK 465 PHE C 77 REMARK 465 ARG C 78 REMARK 465 ASN C 79 REMARK 465 ILE C 80 REMARK 465 LYS C 194 REMARK 465 VAL C 195 REMARK 465 HIS C 196 REMARK 465 LEU C 197 REMARK 465 ALA C 198 REMARK 465 LYS C 199 REMARK 465 SER C 200 REMARK 465 SER C 201 REMARK 465 ASP C 264 REMARK 465 PHE C 265 REMARK 465 HIS C 266 REMARK 465 GLY C 267 REMARK 465 GLU C 268 REMARK 465 VAL C 269 REMARK 465 THR C 270 REMARK 465 PHE C 271 REMARK 465 MET D 1 REMARK 465 GLY D 2 REMARK 465 GLU D 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 210 OG1 CG2 REMARK 470 THR B 210 OG1 CG2 REMARK 470 THR D 210 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O MET D 8 O GLU D 36 2.12 REMARK 500 O THR D 206 O THR D 270 2.17 REMARK 500 O VAL B 207 O PHE B 271 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 24 16.42 -50.58 REMARK 500 VAL A 26 -3.80 74.74 REMARK 500 VAL A 27 99.02 -175.91 REMARK 500 ALA A 28 -108.70 9.37 REMARK 500 ASP A 29 135.71 -179.37 REMARK 500 ALA A 31 121.64 98.59 REMARK 500 SER A 42 106.49 178.86 REMARK 500 LYS A 44 157.41 -33.72 REMARK 500 ASP A 45 -32.74 110.12 REMARK 500 ALA A 46 106.35 173.64 REMARK 500 LYS A 60 -73.47 -65.43 REMARK 500 LYS A 121 -102.24 -57.62 REMARK 500 THR A 122 145.07 52.65 REMARK 500 ASN A 133 37.18 -86.42 REMARK 500 THR A 171 -147.47 -78.82 REMARK 500 SER A 201 -126.63 -138.73 REMARK 500 SER A 203 -155.84 29.72 REMARK 500 ALA A 204 135.17 116.27 REMARK 500 LEU A 205 173.19 133.76 REMARK 500 THR A 206 -145.32 -93.13 REMARK 500 TRP A 208 150.55 59.63 REMARK 500 TYR A 234 110.26 72.22 REMARK 500 GLU A 246 20.79 -69.01 REMARK 500 VAL A 269 -69.57 -97.02 REMARK 500 THR A 270 154.04 55.68 REMARK 500 PHE A 271 -100.42 -127.75 REMARK 500 GLN A 279 -53.28 -142.88 REMARK 500 GLN B 24 35.03 -61.47 REMARK 500 LYS B 25 84.27 -165.43 REMARK 500 VAL B 26 -33.32 72.04 REMARK 500 VAL B 27 72.65 -159.71 REMARK 500 ALA B 28 -140.70 29.00 REMARK 500 ASP B 29 115.77 -175.60 REMARK 500 ALA B 31 141.97 73.12 REMARK 500 ASP B 37 103.89 125.98 REMARK 500 SER B 42 103.97 64.48 REMARK 500 SER B 43 116.10 46.76 REMARK 500 LYS B 44 37.49 -65.16 REMARK 500 GLN B 62 70.43 -113.30 REMARK 500 VAL B 73 -165.30 -127.07 REMARK 500 ASN B 133 32.32 -81.65 REMARK 500 THR B 171 -147.93 -80.02 REMARK 500 SER B 200 31.93 -63.96 REMARK 500 SER B 201 -155.14 171.77 REMARK 500 THR B 206 -179.83 62.13 REMARK 500 VAL B 207 -179.89 -64.88 REMARK 500 GLU B 233 -153.68 -104.11 REMARK 500 TYR B 234 110.90 54.34 REMARK 500 ASP B 248 -154.42 -86.40 REMARK 500 GLU B 249 123.84 101.15 REMARK 500 REMARK 500 THIS ENTRY HAS 127 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 42 SER A 43 -144.37 REMARK 500 LYS A 44 ASP A 45 -138.46 REMARK 500 ASP A 184 GLY A 185 148.07 REMARK 500 SER C 43 LYS C 44 134.17 REMARK 500 GLY C 209 THR C 210 -147.02 REMARK 500 THR C 273 THR C 274 -130.83 REMARK 500 LYS D 44 ASP D 45 132.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP D 401 DBREF 4E5Y A 1 321 UNP Q13630 FCL_HUMAN 1 321 DBREF 4E5Y B 1 321 UNP Q13630 FCL_HUMAN 1 321 DBREF 4E5Y C 1 321 UNP Q13630 FCL_HUMAN 1 321 DBREF 4E5Y D 1 321 UNP Q13630 FCL_HUMAN 1 321 SEQRES 1 A 321 MET GLY GLU PRO GLN GLY SER MET ARG ILE LEU VAL THR SEQRES 2 A 321 GLY GLY SER GLY LEU VAL GLY LYS ALA ILE GLN LYS VAL SEQRES 3 A 321 VAL ALA ASP GLY ALA GLY LEU PRO GLY GLU ASP TRP VAL SEQRES 4 A 321 PHE VAL SER SER LYS ASP ALA ASP LEU THR ASP THR ALA SEQRES 5 A 321 GLN THR ARG ALA LEU PHE GLU LYS VAL GLN PRO THR HIS SEQRES 6 A 321 VAL ILE HIS LEU ALA ALA MET VAL GLY GLY LEU PHE ARG SEQRES 7 A 321 ASN ILE LYS TYR ASN LEU ASP PHE TRP ARG LYS ASN VAL SEQRES 8 A 321 HIS MET ASN ASP ASN VAL LEU HIS SER ALA PHE GLU VAL SEQRES 9 A 321 GLY ALA ARG LYS VAL VAL SER CYS LEU SER THR CYS ILE SEQRES 10 A 321 PHE PRO ASP LYS THR THR TYR PRO ILE ASP GLU THR MET SEQRES 11 A 321 ILE HIS ASN GLY PRO PRO HIS ASN SER ASN PHE GLY TYR SEQRES 12 A 321 SER TYR ALA LYS ARG MET ILE ASP VAL GLN ASN ARG ALA SEQRES 13 A 321 TYR PHE GLN GLN TYR GLY CYS THR PHE THR ALA VAL ILE SEQRES 14 A 321 PRO THR ASN VAL PHE GLY PRO HIS ASP ASN PHE ASN ILE SEQRES 15 A 321 GLU ASP GLY HIS VAL LEU PRO GLY LEU ILE HIS LYS VAL SEQRES 16 A 321 HIS LEU ALA LYS SER SER GLY SER ALA LEU THR VAL TRP SEQRES 17 A 321 GLY THR GLY ASN PRO ARG ARG GLN PHE ILE TYR SER LEU SEQRES 18 A 321 ASP LEU ALA GLN LEU PHE ILE TRP VAL LEU ARG GLU TYR SEQRES 19 A 321 ASN GLU VAL GLU PRO ILE ILE LEU SER VAL GLY GLU GLU SEQRES 20 A 321 ASP GLU VAL SER ILE LYS GLU ALA ALA GLU ALA VAL VAL SEQRES 21 A 321 GLU ALA MET ASP PHE HIS GLY GLU VAL THR PHE ASP THR SEQRES 22 A 321 THR LYS SER ASP GLY GLN PHE LYS LYS THR ALA SER ASN SEQRES 23 A 321 SER LYS LEU ARG THR TYR LEU PRO ASP PHE ARG PHE THR SEQRES 24 A 321 PRO PHE LYS GLN ALA VAL LYS GLU THR CYS ALA TRP PHE SEQRES 25 A 321 THR ASP ASN TYR GLU GLN ALA ARG LYS SEQRES 1 B 321 MET GLY GLU PRO GLN GLY SER MET ARG ILE LEU VAL THR SEQRES 2 B 321 GLY GLY SER GLY LEU VAL GLY LYS ALA ILE GLN LYS VAL SEQRES 3 B 321 VAL ALA ASP GLY ALA GLY LEU PRO GLY GLU ASP TRP VAL SEQRES 4 B 321 PHE VAL SER SER LYS ASP ALA ASP LEU THR ASP THR ALA SEQRES 5 B 321 GLN THR ARG ALA LEU PHE GLU LYS VAL GLN PRO THR HIS SEQRES 6 B 321 VAL ILE HIS LEU ALA ALA MET VAL GLY GLY LEU PHE ARG SEQRES 7 B 321 ASN ILE LYS TYR ASN LEU ASP PHE TRP ARG LYS ASN VAL SEQRES 8 B 321 HIS MET ASN ASP ASN VAL LEU HIS SER ALA PHE GLU VAL SEQRES 9 B 321 GLY ALA ARG LYS VAL VAL SER CYS LEU SER THR CYS ILE SEQRES 10 B 321 PHE PRO ASP LYS THR THR TYR PRO ILE ASP GLU THR MET SEQRES 11 B 321 ILE HIS ASN GLY PRO PRO HIS ASN SER ASN PHE GLY TYR SEQRES 12 B 321 SER TYR ALA LYS ARG MET ILE ASP VAL GLN ASN ARG ALA SEQRES 13 B 321 TYR PHE GLN GLN TYR GLY CYS THR PHE THR ALA VAL ILE SEQRES 14 B 321 PRO THR ASN VAL PHE GLY PRO HIS ASP ASN PHE ASN ILE SEQRES 15 B 321 GLU ASP GLY HIS VAL LEU PRO GLY LEU ILE HIS LYS VAL SEQRES 16 B 321 HIS LEU ALA LYS SER SER GLY SER ALA LEU THR VAL TRP SEQRES 17 B 321 GLY THR GLY ASN PRO ARG ARG GLN PHE ILE TYR SER LEU SEQRES 18 B 321 ASP LEU ALA GLN LEU PHE ILE TRP VAL LEU ARG GLU TYR SEQRES 19 B 321 ASN GLU VAL GLU PRO ILE ILE LEU SER VAL GLY GLU GLU SEQRES 20 B 321 ASP GLU VAL SER ILE LYS GLU ALA ALA GLU ALA VAL VAL SEQRES 21 B 321 GLU ALA MET ASP PHE HIS GLY GLU VAL THR PHE ASP THR SEQRES 22 B 321 THR LYS SER ASP GLY GLN PHE LYS LYS THR ALA SER ASN SEQRES 23 B 321 SER LYS LEU ARG THR TYR LEU PRO ASP PHE ARG PHE THR SEQRES 24 B 321 PRO PHE LYS GLN ALA VAL LYS GLU THR CYS ALA TRP PHE SEQRES 25 B 321 THR ASP ASN TYR GLU GLN ALA ARG LYS SEQRES 1 C 321 MET GLY GLU PRO GLN GLY SER MET ARG ILE LEU VAL THR SEQRES 2 C 321 GLY GLY SER GLY LEU VAL GLY LYS ALA ILE GLN LYS VAL SEQRES 3 C 321 VAL ALA ASP GLY ALA GLY LEU PRO GLY GLU ASP TRP VAL SEQRES 4 C 321 PHE VAL SER SER LYS ASP ALA ASP LEU THR ASP THR ALA SEQRES 5 C 321 GLN THR ARG ALA LEU PHE GLU LYS VAL GLN PRO THR HIS SEQRES 6 C 321 VAL ILE HIS LEU ALA ALA MET VAL GLY GLY LEU PHE ARG SEQRES 7 C 321 ASN ILE LYS TYR ASN LEU ASP PHE TRP ARG LYS ASN VAL SEQRES 8 C 321 HIS MET ASN ASP ASN VAL LEU HIS SER ALA PHE GLU VAL SEQRES 9 C 321 GLY ALA ARG LYS VAL VAL SER CYS LEU SER THR CYS ILE SEQRES 10 C 321 PHE PRO ASP LYS THR THR TYR PRO ILE ASP GLU THR MET SEQRES 11 C 321 ILE HIS ASN GLY PRO PRO HIS ASN SER ASN PHE GLY TYR SEQRES 12 C 321 SER TYR ALA LYS ARG MET ILE ASP VAL GLN ASN ARG ALA SEQRES 13 C 321 TYR PHE GLN GLN TYR GLY CYS THR PHE THR ALA VAL ILE SEQRES 14 C 321 PRO THR ASN VAL PHE GLY PRO HIS ASP ASN PHE ASN ILE SEQRES 15 C 321 GLU ASP GLY HIS VAL LEU PRO GLY LEU ILE HIS LYS VAL SEQRES 16 C 321 HIS LEU ALA LYS SER SER GLY SER ALA LEU THR VAL TRP SEQRES 17 C 321 GLY THR GLY ASN PRO ARG ARG GLN PHE ILE TYR SER LEU SEQRES 18 C 321 ASP LEU ALA GLN LEU PHE ILE TRP VAL LEU ARG GLU TYR SEQRES 19 C 321 ASN GLU VAL GLU PRO ILE ILE LEU SER VAL GLY GLU GLU SEQRES 20 C 321 ASP GLU VAL SER ILE LYS GLU ALA ALA GLU ALA VAL VAL SEQRES 21 C 321 GLU ALA MET ASP PHE HIS GLY GLU VAL THR PHE ASP THR SEQRES 22 C 321 THR LYS SER ASP GLY GLN PHE LYS LYS THR ALA SER ASN SEQRES 23 C 321 SER LYS LEU ARG THR TYR LEU PRO ASP PHE ARG PHE THR SEQRES 24 C 321 PRO PHE LYS GLN ALA VAL LYS GLU THR CYS ALA TRP PHE SEQRES 25 C 321 THR ASP ASN TYR GLU GLN ALA ARG LYS SEQRES 1 D 321 MET GLY GLU PRO GLN GLY SER MET ARG ILE LEU VAL THR SEQRES 2 D 321 GLY GLY SER GLY LEU VAL GLY LYS ALA ILE GLN LYS VAL SEQRES 3 D 321 VAL ALA ASP GLY ALA GLY LEU PRO GLY GLU ASP TRP VAL SEQRES 4 D 321 PHE VAL SER SER LYS ASP ALA ASP LEU THR ASP THR ALA SEQRES 5 D 321 GLN THR ARG ALA LEU PHE GLU LYS VAL GLN PRO THR HIS SEQRES 6 D 321 VAL ILE HIS LEU ALA ALA MET VAL GLY GLY LEU PHE ARG SEQRES 7 D 321 ASN ILE LYS TYR ASN LEU ASP PHE TRP ARG LYS ASN VAL SEQRES 8 D 321 HIS MET ASN ASP ASN VAL LEU HIS SER ALA PHE GLU VAL SEQRES 9 D 321 GLY ALA ARG LYS VAL VAL SER CYS LEU SER THR CYS ILE SEQRES 10 D 321 PHE PRO ASP LYS THR THR TYR PRO ILE ASP GLU THR MET SEQRES 11 D 321 ILE HIS ASN GLY PRO PRO HIS ASN SER ASN PHE GLY TYR SEQRES 12 D 321 SER TYR ALA LYS ARG MET ILE ASP VAL GLN ASN ARG ALA SEQRES 13 D 321 TYR PHE GLN GLN TYR GLY CYS THR PHE THR ALA VAL ILE SEQRES 14 D 321 PRO THR ASN VAL PHE GLY PRO HIS ASP ASN PHE ASN ILE SEQRES 15 D 321 GLU ASP GLY HIS VAL LEU PRO GLY LEU ILE HIS LYS VAL SEQRES 16 D 321 HIS LEU ALA LYS SER SER GLY SER ALA LEU THR VAL TRP SEQRES 17 D 321 GLY THR GLY ASN PRO ARG ARG GLN PHE ILE TYR SER LEU SEQRES 18 D 321 ASP LEU ALA GLN LEU PHE ILE TRP VAL LEU ARG GLU TYR SEQRES 19 D 321 ASN GLU VAL GLU PRO ILE ILE LEU SER VAL GLY GLU GLU SEQRES 20 D 321 ASP GLU VAL SER ILE LYS GLU ALA ALA GLU ALA VAL VAL SEQRES 21 D 321 GLU ALA MET ASP PHE HIS GLY GLU VAL THR PHE ASP THR SEQRES 22 D 321 THR LYS SER ASP GLY GLN PHE LYS LYS THR ALA SER ASN SEQRES 23 D 321 SER LYS LEU ARG THR TYR LEU PRO ASP PHE ARG PHE THR SEQRES 24 D 321 PRO PHE LYS GLN ALA VAL LYS GLU THR CYS ALA TRP PHE SEQRES 25 D 321 THR ASP ASN TYR GLU GLN ALA ARG LYS HET NDP A 401 48 HET NDP B 401 48 HET NDP C 401 48 HET NDP D 401 48 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE FORMUL 5 NDP 4(C21 H30 N7 O17 P3) FORMUL 9 HOH *22(H2 O) HELIX 1 1 GLY A 17 GLN A 24 1 8 HELIX 2 2 ASP A 50 VAL A 61 1 12 HELIX 3 3 TYR A 82 VAL A 104 1 23 HELIX 4 4 SER A 114 PHE A 118 5 5 HELIX 5 5 ASP A 127 ILE A 131 5 5 HELIX 6 6 ASN A 140 GLY A 162 1 23 HELIX 7 7 HIS A 186 SER A 200 1 15 HELIX 8 8 SER A 220 GLU A 233 1 14 HELIX 9 9 ILE A 252 ASP A 264 1 13 HELIX 10 10 ASN A 286 LEU A 293 1 8 HELIX 11 11 PRO A 300 ASN A 315 1 16 HELIX 12 12 GLY B 17 GLN B 24 1 8 HELIX 13 13 ASP B 50 VAL B 61 1 12 HELIX 14 14 TYR B 82 VAL B 104 1 23 HELIX 15 15 SER B 114 PHE B 118 5 5 HELIX 16 16 ASP B 127 ILE B 131 5 5 HELIX 17 17 HIS B 137 SER B 139 5 3 HELIX 18 18 ASN B 140 GLY B 162 1 23 HELIX 19 19 HIS B 186 SER B 200 1 15 HELIX 20 20 SER B 220 GLU B 233 1 14 HELIX 21 21 ILE B 252 MET B 263 1 12 HELIX 22 22 ASN B 286 LEU B 293 1 8 HELIX 23 23 PRO B 300 ASN B 315 1 16 HELIX 24 24 TYR B 316 ALA B 319 5 4 HELIX 25 25 GLY C 17 GLN C 24 1 8 HELIX 26 26 ASP C 50 VAL C 61 1 12 HELIX 27 27 TYR C 82 VAL C 104 1 23 HELIX 28 28 SER C 114 PHE C 118 5 5 HELIX 29 29 ASP C 127 ILE C 131 5 5 HELIX 30 30 ASN C 140 GLY C 162 1 23 HELIX 31 31 SER C 220 TYR C 234 1 15 HELIX 32 32 ASN C 286 LEU C 293 1 8 HELIX 33 33 PRO C 300 TYR C 316 1 17 HELIX 34 34 GLY D 17 GLN D 24 1 8 HELIX 35 35 ASP D 50 VAL D 61 1 12 HELIX 36 36 TYR D 82 VAL D 104 1 23 HELIX 37 37 SER D 114 PHE D 118 5 5 HELIX 38 38 ASP D 127 ILE D 131 5 5 HELIX 39 39 ASN D 140 GLY D 162 1 23 HELIX 40 40 HIS D 186 SER D 200 1 15 HELIX 41 41 SER D 220 GLU D 233 1 14 HELIX 42 42 ILE D 252 ASP D 264 1 13 HELIX 43 43 ASN D 286 LEU D 293 1 8 HELIX 44 44 PRO D 300 ASN D 315 1 16 SHEET 1 A 6 ASP A 37 PHE A 40 0 SHEET 2 A 6 ARG A 9 THR A 13 1 N VAL A 12 O VAL A 39 SHEET 3 A 6 HIS A 65 HIS A 68 1 O HIS A 65 N LEU A 11 SHEET 4 A 6 LYS A 108 CYS A 112 1 O VAL A 110 N VAL A 66 SHEET 5 A 6 THR A 164 PRO A 170 1 O VAL A 168 N SER A 111 SHEET 6 A 6 ILE A 240 LEU A 242 1 O ILE A 240 N ILE A 169 SHEET 1 B 2 ASN A 172 PHE A 174 0 SHEET 2 B 2 PHE A 217 TYR A 219 1 O ILE A 218 N ASN A 172 SHEET 1 C 2 ARG A 214 ARG A 215 0 SHEET 2 C 2 VAL A 250 SER A 251 -1 O VAL A 250 N ARG A 215 SHEET 1 D 6 TRP B 38 PHE B 40 0 SHEET 2 D 6 ILE B 10 THR B 13 1 N ILE B 10 O VAL B 39 SHEET 3 D 6 HIS B 65 HIS B 68 1 O ILE B 67 N LEU B 11 SHEET 4 D 6 LYS B 108 CYS B 112 1 O VAL B 110 N HIS B 68 SHEET 5 D 6 THR B 164 PRO B 170 1 O THR B 166 N VAL B 109 SHEET 6 D 6 ILE B 240 LEU B 242 1 O ILE B 240 N ILE B 169 SHEET 1 E 2 ASN B 172 PHE B 174 0 SHEET 2 E 2 PHE B 217 TYR B 219 1 O ILE B 218 N ASN B 172 SHEET 1 F 2 ARG B 214 ARG B 215 0 SHEET 2 F 2 VAL B 250 SER B 251 -1 O VAL B 250 N ARG B 215 SHEET 1 G 6 ASP C 37 PHE C 40 0 SHEET 2 G 6 ARG C 9 THR C 13 1 N ILE C 10 O VAL C 39 SHEET 3 G 6 HIS C 65 HIS C 68 1 N HIS C 65 O ARG C 9 SHEET 4 G 6 LYS C 108 CYS C 112 1 O VAL C 110 N VAL C 66 SHEET 5 G 6 THR C 164 PRO C 170 1 O THR C 166 N VAL C 109 SHEET 6 G 6 ILE C 240 LEU C 242 1 O ILE C 240 N ILE C 169 SHEET 1 H 2 ASN C 172 PHE C 174 0 SHEET 2 H 2 PHE C 217 TYR C 219 1 O ILE C 218 N ASN C 172 SHEET 1 I 6 TRP D 38 PHE D 40 0 SHEET 2 I 6 ILE D 10 THR D 13 1 N VAL D 12 O VAL D 39 SHEET 3 I 6 HIS D 65 HIS D 68 1 O ILE D 67 N LEU D 11 SHEET 4 I 6 LYS D 108 CYS D 112 1 O VAL D 110 N VAL D 66 SHEET 5 I 6 THR D 164 PRO D 170 1 O THR D 166 N VAL D 109 SHEET 6 I 6 ILE D 240 LEU D 242 1 O ILE D 240 N ILE D 169 SHEET 1 J 2 ASN D 172 PHE D 174 0 SHEET 2 J 2 PHE D 217 TYR D 219 1 O ILE D 218 N ASN D 172 SHEET 1 K 2 ARG D 214 ARG D 215 0 SHEET 2 K 2 VAL D 250 SER D 251 -1 O VAL D 250 N ARG D 215 CISPEP 1 LYS A 25 VAL A 26 0 -6.69 CISPEP 2 VAL A 27 ALA A 28 0 1.56 CISPEP 3 SER A 43 LYS A 44 0 8.04 CISPEP 4 TYR A 124 PRO A 125 0 3.28 CISPEP 5 LEU A 205 THR A 206 0 -10.06 CISPEP 6 GLN A 279 PHE A 280 0 -7.71 CISPEP 7 LYS B 25 VAL B 26 0 -1.08 CISPEP 8 VAL B 27 ALA B 28 0 -4.09 CISPEP 9 SER B 42 SER B 43 0 -4.52 CISPEP 10 TYR B 124 PRO B 125 0 2.06 CISPEP 11 LEU B 205 THR B 206 0 0.81 CISPEP 12 THR B 206 VAL B 207 0 -2.82 CISPEP 13 GLN B 279 PHE B 280 0 12.05 CISPEP 14 LYS C 25 VAL C 26 0 -0.43 CISPEP 15 VAL C 27 ALA C 28 0 16.66 CISPEP 16 SER C 42 SER C 43 0 21.89 CISPEP 17 LYS C 44 ASP C 45 0 -7.25 CISPEP 18 VAL C 73 GLY C 74 0 -8.85 CISPEP 19 TYR C 124 PRO C 125 0 -2.53 CISPEP 20 LEU C 191 ILE C 192 0 -8.96 CISPEP 21 GLY C 202 SER C 203 0 -3.03 CISPEP 22 SER C 203 ALA C 204 0 13.75 CISPEP 23 PRO C 213 ARG C 214 0 -13.31 CISPEP 24 ARG C 214 ARG C 215 0 5.66 CISPEP 25 VAL C 250 SER C 251 0 6.01 CISPEP 26 VAL C 259 VAL C 260 0 2.53 CISPEP 27 LYS C 275 SER C 276 0 -2.70 CISPEP 28 GLY C 278 GLN C 279 0 4.16 CISPEP 29 GLN D 5 GLY D 6 0 12.60 CISPEP 30 LYS D 25 VAL D 26 0 -6.62 CISPEP 31 VAL D 27 ALA D 28 0 -4.25 CISPEP 32 GLY D 32 LEU D 33 0 -6.05 CISPEP 33 LEU D 33 PRO D 34 0 -3.54 CISPEP 34 SER D 43 LYS D 44 0 18.28 CISPEP 35 TYR D 124 PRO D 125 0 2.75 CISPEP 36 LEU D 205 THR D 206 0 14.55 CISPEP 37 THR D 206 VAL D 207 0 0.58 CISPEP 38 GLN D 279 PHE D 280 0 -2.21 SITE 1 AC1 22 GLY A 14 SER A 16 GLY A 17 LEU A 18 SITE 2 AC1 22 VAL A 19 SER A 42 SER A 43 ALA A 46 SITE 3 AC1 22 ASP A 47 LEU A 48 LEU A 69 ALA A 70 SITE 4 AC1 22 ALA A 71 CYS A 112 LEU A 113 SER A 114 SITE 5 AC1 22 TYR A 143 LYS A 147 PRO A 170 THR A 171 SITE 6 AC1 22 VAL A 173 ARG A 320 SITE 1 AC2 24 GLY B 14 SER B 16 GLY B 17 LEU B 18 SITE 2 AC2 24 VAL B 19 SER B 42 SER B 43 LYS B 44 SITE 3 AC2 24 ALA B 46 ASP B 47 LEU B 48 LEU B 69 SITE 4 AC2 24 ALA B 70 ALA B 71 VAL B 73 CYS B 112 SITE 5 AC2 24 LEU B 113 SER B 114 TYR B 143 LYS B 147 SITE 6 AC2 24 PRO B 170 THR B 171 VAL B 173 ARG B 320 SITE 1 AC3 24 GLY C 14 SER C 16 GLY C 17 LEU C 18 SITE 2 AC3 24 VAL C 19 SER C 42 SER C 43 ALA C 46 SITE 3 AC3 24 ASP C 47 LEU C 48 LEU C 69 ALA C 70 SITE 4 AC3 24 ALA C 71 VAL C 73 MET C 93 CYS C 112 SITE 5 AC3 24 LEU C 113 SER C 114 TYR C 143 LYS C 147 SITE 6 AC3 24 THR C 171 VAL C 173 HIS C 186 ARG C 320 SITE 1 AC4 24 GLY D 14 SER D 16 GLY D 17 LEU D 18 SITE 2 AC4 24 VAL D 19 SER D 42 SER D 43 ALA D 46 SITE 3 AC4 24 ASP D 47 LEU D 48 LEU D 69 ALA D 70 SITE 4 AC4 24 ALA D 71 CYS D 112 LEU D 113 SER D 114 SITE 5 AC4 24 TYR D 143 LYS D 147 PRO D 170 THR D 171 SITE 6 AC4 24 ASN D 172 VAL D 173 ARG D 320 HOH D 502 CRYST1 85.772 136.440 139.849 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011659 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007329 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007151 0.00000