data_4E6B # _entry.id 4E6B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4E6B pdb_00004e6b 10.2210/pdb4e6b/pdb NDB NA1659 ? ? RCSB RCSB071223 ? ? WWPDB D_1000071223 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-07-11 2 'Structure model' 1 1 2012-08-29 3 'Structure model' 1 2 2017-11-15 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.entry_id 4E6B _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-03-15 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4E48 . unspecified PDB 4E5C . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Malinina, L.' 1 'Popov, A.' 2 'Tamjar, J.' 3 # _citation.id primary _citation.title 'Structural dynamics of double-helical RNAs composed of CUG/CUG- and CUG/CGG-repeats.' _citation.journal_abbrev J.Biomol.Struct.Dyn. _citation.journal_volume 30 _citation.page_first 505 _citation.page_last 523 _citation.year 2012 _citation.journal_id_ASTM JBSDD6 _citation.country US _citation.journal_id_ISSN 0739-1102 _citation.journal_id_CSD 0646 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22731704 _citation.pdbx_database_id_DOI 10.1080/07391102.2012.687517 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tamjar, J.' 1 ? primary 'Katorcha, E.' 2 ? primary 'Popov, A.' 3 ? primary 'Malinina, L.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-R(P*CP*GP*GP*CP*GP*GP*CP*GP*GP*CP*CP*UP*GP*CP*UP*GP*CP*UP*G)-3'" 1255.818 2 ? ? 'SEE REMARK 999' 'p(CGG)3C(CUG)3' 2 polymer syn "5'-R(P*CP*GP*GP*CP*GP*GP*CP*GP*GP*CP*CP*UP*GP*CP*UP*GP*CP*UP*G)-3'" 1255.818 2 ? ? 'SEE REMARK 999' 'p(CGG)3C(CUG)3' 3 water nat water 18.015 18 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no CGCG CGCG A,B ? 2 polyribonucleotide no no GCGC GCGC F,E ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 G n 1 3 C n 1 4 G n 2 1 G n 2 2 C n 2 3 G n 2 4 C n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 8 8 C C A . n A 1 2 G 2 9 9 G G A . n A 1 3 C 3 10 10 C C A . n A 1 4 G 4 11 11 G G A . n B 1 1 C 1 7 7 C C B . n B 1 2 G 2 8 8 G G B . n B 1 3 C 3 9 9 C C B . n B 1 4 G 4 10 10 G G B . n C 2 1 G 1 8 8 G G F . n C 2 2 C 2 9 9 C C F . n C 2 3 G 3 10 10 G G F . n C 2 4 C 4 11 11 C C F . n D 2 1 G 1 7 7 G G E . n D 2 2 C 2 8 8 C C E . n D 2 3 G 3 9 9 G G E . n D 2 4 C 4 10 10 C C E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 101 3 HOH HOH A . E 3 HOH 2 102 4 HOH HOH A . E 3 HOH 3 103 8 HOH HOH A . E 3 HOH 4 104 9 HOH HOH A . E 3 HOH 5 105 12 HOH HOH A . E 3 HOH 6 106 13 HOH HOH A . E 3 HOH 7 107 14 HOH HOH A . E 3 HOH 8 108 16 HOH HOH A . E 3 HOH 9 109 20 HOH HOH A . E 3 HOH 10 110 21 HOH HOH A . F 3 HOH 1 101 10 HOH HOH B . F 3 HOH 2 102 11 HOH HOH B . F 3 HOH 3 103 18 HOH HOH B . F 3 HOH 4 104 19 HOH HOH B . F 3 HOH 5 105 23 HOH HOH B . F 3 HOH 6 106 24 HOH HOH B . G 3 HOH 1 101 17 HOH HOH E . G 3 HOH 2 102 22 HOH HOH E . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 AMoRE . ? program 'Jorge Navaza' ccp4@ccp4.ac.uk phasing http://www.ccp4.ac.uk/ Fortran_77 ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 6 DENZO . ? ? ? ? 'data reduction' ? ? ? # _cell.length_a 39.779 _cell.length_b 39.779 _cell.length_c 34.900 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 4E6B _cell.pdbx_unique_axis ? _cell.Z_PDB 18 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'H 3' _symmetry.entry_id 4E6B _symmetry.Int_Tables_number 146 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 4E6B _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.12 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 41.86 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.2 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pdbx_details '1.9 mM ammonium sulfate, 5% isopropanol, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2010-10-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9724 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.pdbx_wavelength_list 0.9724 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-1 # _reflns.entry_id 4E6B _reflns.d_resolution_high 1.470 _reflns.d_resolution_low 30.0 _reflns.number_obs 3488 _reflns.pdbx_Rmerge_I_obs 0.049 _reflns.pdbx_netI_over_sigmaI 24.1 _reflns.pdbx_chi_squared 1.259 _reflns.pdbx_redundancy 3.4 _reflns.percent_possible_obs 99.4 _reflns.observed_criterion_sigma_F 2 _reflns.observed_criterion_sigma_I 2 _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.470 1.500 ? ? ? 0.169 ? ? 1.176 2.1 ? 169 97.1 1 1 1.500 1.520 ? ? ? 0.144 ? ? 1.017 2.2 ? 179 100.0 2 1 1.520 1.550 ? ? ? 0.125 ? ? 0.837 2.3 ? 171 100.0 3 1 1.550 1.580 ? ? ? 0.087 ? ? 0.903 2.2 ? 176 100.0 4 1 1.580 1.620 ? ? ? 0.090 ? ? 1.192 2.2 ? 172 100.0 5 1 1.620 1.660 ? ? ? 0.070 ? ? 0.933 2.2 ? 177 98.9 6 1 1.660 1.700 ? ? ? 0.064 ? ? 0.969 2.3 ? 171 98.8 7 1 1.700 1.740 ? ? ? 0.045 ? ? 0.903 2.2 ? 168 97.1 8 1 1.740 1.790 ? ? ? 0.048 ? ? 1.001 2.3 ? 170 100.0 9 1 1.790 1.850 ? ? ? 0.043 ? ? 0.815 2.2 ? 185 100.0 10 1 1.850 1.920 ? ? ? 0.032 ? ? 0.728 2.3 ? 178 99.4 11 1 1.920 1.990 ? ? ? 0.028 ? ? 0.829 2.1 ? 174 99.4 12 1 1.990 2.090 ? ? ? 0.029 ? ? 0.994 2.3 ? 164 99.4 13 1 2.090 2.200 ? ? ? 0.029 ? ? 0.742 2.3 ? 184 100.0 14 1 2.200 2.330 ? ? ? 0.026 ? ? 0.878 2.3 ? 180 100.0 15 1 2.330 2.510 ? ? ? 0.042 ? ? 1.577 2.3 ? 176 100.0 16 1 2.510 2.770 ? ? ? 0.040 ? ? 2.381 2.2 ? 167 99.4 17 1 2.770 3.170 ? ? ? 0.071 ? ? 1.941 6.1 ? 175 98.3 18 1 3.170 3.990 ? ? ? 0.053 ? ? 1.335 12.5 ? 174 99.4 19 1 3.990 30.000 ? ? ? 0.045 ? ? 1.268 11.8 ? 178 100.0 20 1 # _refine.entry_id 4E6B _refine.ls_d_res_high 1.470 _refine.ls_d_res_low 15.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.4 _refine.ls_number_reflns_obs 3481 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2048 _refine.ls_R_factor_R_work 0.2043 _refine.ls_wR_factor_R_work 0.2469 _refine.ls_R_factor_R_free 0.2194 _refine.ls_wR_factor_R_free 0.2611 _refine.ls_percent_reflns_R_free 4.4000 _refine.ls_number_reflns_R_free 152 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 31.9728 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.0100 _refine.aniso_B[2][2] 0.0100 _refine.aniso_B[3][3] -0.0200 _refine.aniso_B[1][2] 0.0100 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9740 _refine.correlation_coeff_Fo_to_Fc_free 0.9680 _refine.overall_SU_R_Cruickshank_DPI 0.1340 _refine.overall_SU_R_free 0.1082 _refine.pdbx_overall_ESU_R 0.1340 _refine.pdbx_overall_ESU_R_Free 0.1080 _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.7923 _refine.B_iso_max 64.280 _refine.B_iso_min 23.900 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.160 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 344 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 18 _refine_hist.number_atoms_total 362 _refine_hist.d_res_high 1.470 _refine_hist.d_res_low 15.0 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 382 0.020 0.021 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 128 0.000 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 592 1.859 3.000 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 336 1.673 3.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 80 0.071 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 168 0.006 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 32 0.012 0.020 ? ? 'X-RAY DIFFRACTION' r_nbd_refined 14 0.060 0.200 ? ? 'X-RAY DIFFRACTION' r_nbd_other 106 0.192 0.200 ? ? 'X-RAY DIFFRACTION' r_nbtor_refined 137 0.239 0.200 ? ? 'X-RAY DIFFRACTION' r_nbtor_other 82 0.059 0.200 ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined 3 0.031 0.200 ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined 2 0.115 0.200 ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other 2 0.528 0.200 ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined 1 0.005 0.200 ? ? 'X-RAY DIFFRACTION' r_scbond_it 382 1.329 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 592 1.903 4.500 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.470 _refine_ls_shell.d_res_low 1.508 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.48 _refine_ls_shell.number_reflns_R_work 247 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2580 _refine_ls_shell.R_factor_R_free 0.1940 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 13 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 260 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4E6B _struct.title 'Crystal Structure of statistically disordered 19mer duplex p(CGG)3C(CUG)3' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4E6B _struct_keywords.text 'siRNA, trinucleotide repeat expansion, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 PDB 4E6B 4E6B 1 1 CGCG ? 2 PDB 4E6B 4E6B 2 1 GCGC ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4E6B A 1 ? 4 ? 4E6B 8 ? 11 ? 8 11 2 1 4E6B B 1 ? 4 ? 4E6B 7 ? 10 ? 7 10 3 2 4E6B F 1 ? 4 ? 4E6B 8 ? 11 ? 8 11 4 2 4E6B E 1 ? 4 ? 4E6B 7 ? 10 ? 7 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ;THE BIOLOGICAL ASSEMBLY IS A 19-MER RNA DUPLEX. DUE TO STATISTICAL DISORDER WITHIN THE CRYSTAL, REMARK 350 REPRESENTS THE ASYMMETRIC UNIT. ; # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A C 1 N3 ? ? ? 1_555 B G 4 N1 ? ? A C 8 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 1 N4 ? ? ? 1_555 B G 4 O6 ? ? A C 8 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 1 O2 ? ? ? 1_555 B G 4 N2 ? ? A C 8 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 B C 3 N3 ? ? A G 9 B C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 B C 3 O2 ? ? A G 9 B C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 B C 3 N4 ? ? A G 9 B C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 B G 2 N1 ? ? A C 10 B G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 B G 2 O6 ? ? A C 10 B G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 B G 2 N2 ? ? A C 10 B G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N1 ? ? ? 1_555 B C 1 N3 ? ? A G 11 B C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 4 N2 ? ? ? 1_555 B C 1 O2 ? ? A G 11 B C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 4 O6 ? ? ? 1_555 B C 1 N4 ? ? A G 11 B C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C G 1 N1 ? ? ? 1_555 D C 4 N3 ? ? F G 8 E C 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C G 1 N2 ? ? ? 1_555 D C 4 O2 ? ? F G 8 E C 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C G 1 O6 ? ? ? 1_555 D C 4 N4 ? ? F G 8 E C 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C C 2 N3 ? ? ? 1_555 D G 3 N1 ? ? F C 9 E G 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C C 2 N4 ? ? ? 1_555 D G 3 O6 ? ? F C 9 E G 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C C 2 O2 ? ? ? 1_555 D G 3 N2 ? ? F C 9 E G 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C G 3 N1 ? ? ? 1_555 D C 2 N3 ? ? F G 10 E C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C G 3 N2 ? ? ? 1_555 D C 2 O2 ? ? F G 10 E C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C G 3 O6 ? ? ? 1_555 D C 2 N4 ? ? F G 10 E C 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C C 4 N3 ? ? ? 1_555 D G 1 N1 ? ? F C 11 E G 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C C 4 N4 ? ? ? 1_555 D G 1 O6 ? ? F C 11 E G 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C C 4 O2 ? ? ? 1_555 D G 1 N2 ? ? F C 11 E G 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N1 _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 G _pdbx_validate_rmsd_angle.auth_seq_id_1 10 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 C6 _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 G _pdbx_validate_rmsd_angle.auth_seq_id_2 10 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 O6 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 G _pdbx_validate_rmsd_angle.auth_seq_id_3 10 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 115.95 _pdbx_validate_rmsd_angle.angle_target_value 119.90 _pdbx_validate_rmsd_angle.angle_deviation -3.95 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.60 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 101 ? E HOH . 2 1 A HOH 102 ? E HOH . 3 1 A HOH 106 ? E HOH . 4 1 B HOH 102 ? F HOH . 5 1 B HOH 103 ? F HOH . 6 1 B HOH 104 ? F HOH . # _phasing.method MR # _pdbx_entry_details.entry_id 4E6B _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;IN THE CRYSTAL, RNA 19-MER P(CGG)3C(CUG)3 PACKS IN A PSEUDO-CONTINUOUS DOUBLE HELIX WITH A 4-BASE ASYMMETRIC UNIT. TO BEST REPRESENT THE ARRANGEMENT OF THE BASES, THE RNA HAS BEEN MODELED AS TWO OVERLAPPING (WITH THE APPLICATION OF CRYSTAL SYMMETRY) SELF-COMPLEMENTARY TETRAMER DUPLEXES WITH OCCUPANCY 0.5. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal C OP3 O N N 1 C P P N N 2 C OP1 O N N 3 C OP2 O N N 4 C "O5'" O N N 5 C "C5'" C N N 6 C "C4'" C N R 7 C "O4'" O N N 8 C "C3'" C N S 9 C "O3'" O N N 10 C "C2'" C N R 11 C "O2'" O N N 12 C "C1'" C N R 13 C N1 N N N 14 C C2 C N N 15 C O2 O N N 16 C N3 N N N 17 C C4 C N N 18 C N4 N N N 19 C C5 C N N 20 C C6 C N N 21 C HOP3 H N N 22 C HOP2 H N N 23 C "H5'" H N N 24 C "H5''" H N N 25 C "H4'" H N N 26 C "H3'" H N N 27 C "HO3'" H N N 28 C "H2'" H N N 29 C "HO2'" H N N 30 C "H1'" H N N 31 C H41 H N N 32 C H42 H N N 33 C H5 H N N 34 C H6 H N N 35 G OP3 O N N 36 G P P N N 37 G OP1 O N N 38 G OP2 O N N 39 G "O5'" O N N 40 G "C5'" C N N 41 G "C4'" C N R 42 G "O4'" O N N 43 G "C3'" C N S 44 G "O3'" O N N 45 G "C2'" C N R 46 G "O2'" O N N 47 G "C1'" C N R 48 G N9 N Y N 49 G C8 C Y N 50 G N7 N Y N 51 G C5 C Y N 52 G C6 C N N 53 G O6 O N N 54 G N1 N N N 55 G C2 C N N 56 G N2 N N N 57 G N3 N N N 58 G C4 C Y N 59 G HOP3 H N N 60 G HOP2 H N N 61 G "H5'" H N N 62 G "H5''" H N N 63 G "H4'" H N N 64 G "H3'" H N N 65 G "HO3'" H N N 66 G "H2'" H N N 67 G "HO2'" H N N 68 G "H1'" H N N 69 G H8 H N N 70 G H1 H N N 71 G H21 H N N 72 G H22 H N N 73 HOH O O N N 74 HOH H1 H N N 75 HOH H2 H N N 76 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal C OP3 P sing N N 1 C OP3 HOP3 sing N N 2 C P OP1 doub N N 3 C P OP2 sing N N 4 C P "O5'" sing N N 5 C OP2 HOP2 sing N N 6 C "O5'" "C5'" sing N N 7 C "C5'" "C4'" sing N N 8 C "C5'" "H5'" sing N N 9 C "C5'" "H5''" sing N N 10 C "C4'" "O4'" sing N N 11 C "C4'" "C3'" sing N N 12 C "C4'" "H4'" sing N N 13 C "O4'" "C1'" sing N N 14 C "C3'" "O3'" sing N N 15 C "C3'" "C2'" sing N N 16 C "C3'" "H3'" sing N N 17 C "O3'" "HO3'" sing N N 18 C "C2'" "O2'" sing N N 19 C "C2'" "C1'" sing N N 20 C "C2'" "H2'" sing N N 21 C "O2'" "HO2'" sing N N 22 C "C1'" N1 sing N N 23 C "C1'" "H1'" sing N N 24 C N1 C2 sing N N 25 C N1 C6 sing N N 26 C C2 O2 doub N N 27 C C2 N3 sing N N 28 C N3 C4 doub N N 29 C C4 N4 sing N N 30 C C4 C5 sing N N 31 C N4 H41 sing N N 32 C N4 H42 sing N N 33 C C5 C6 doub N N 34 C C5 H5 sing N N 35 C C6 H6 sing N N 36 G OP3 P sing N N 37 G OP3 HOP3 sing N N 38 G P OP1 doub N N 39 G P OP2 sing N N 40 G P "O5'" sing N N 41 G OP2 HOP2 sing N N 42 G "O5'" "C5'" sing N N 43 G "C5'" "C4'" sing N N 44 G "C5'" "H5'" sing N N 45 G "C5'" "H5''" sing N N 46 G "C4'" "O4'" sing N N 47 G "C4'" "C3'" sing N N 48 G "C4'" "H4'" sing N N 49 G "O4'" "C1'" sing N N 50 G "C3'" "O3'" sing N N 51 G "C3'" "C2'" sing N N 52 G "C3'" "H3'" sing N N 53 G "O3'" "HO3'" sing N N 54 G "C2'" "O2'" sing N N 55 G "C2'" "C1'" sing N N 56 G "C2'" "H2'" sing N N 57 G "O2'" "HO2'" sing N N 58 G "C1'" N9 sing N N 59 G "C1'" "H1'" sing N N 60 G N9 C8 sing Y N 61 G N9 C4 sing Y N 62 G C8 N7 doub Y N 63 G C8 H8 sing N N 64 G N7 C5 sing Y N 65 G C5 C6 sing N N 66 G C5 C4 doub Y N 67 G C6 O6 doub N N 68 G C6 N1 sing N N 69 G N1 C2 sing N N 70 G N1 H1 sing N N 71 G C2 N2 sing N N 72 G C2 N3 doub N N 73 G N2 H21 sing N N 74 G N2 H22 sing N N 75 G N3 C4 sing N N 76 HOH O H1 sing N N 77 HOH O H2 sing N N 78 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4E6B 'double helix' 4E6B 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 1 1_555 B G 4 1_555 0.981 -0.502 -0.006 1.725 -4.682 -3.510 1 A_C8:G10_B A 8 ? B 10 ? 19 1 1 A G 2 1_555 B C 3 1_555 -0.632 -0.378 -0.060 -4.393 -5.166 1.505 2 A_G9:C9_B A 9 ? B 9 ? 19 1 1 A C 3 1_555 B G 2 1_555 0.943 -0.439 0.045 -1.115 -5.189 -3.713 3 A_C10:G8_B A 10 ? B 8 ? 19 1 1 A G 4 1_555 B C 1 1_555 -0.340 -0.269 0.010 -3.046 1.708 -1.549 4 A_G11:C7_B A 11 ? B 7 ? 19 1 1 C G 1 1_555 D C 4 1_555 -0.925 -0.499 0.049 -0.495 -3.650 -6.319 5 F_G8:C10_E F 8 ? E 10 ? 19 1 1 C C 2 1_555 D G 3 1_555 0.857 -0.594 -0.100 3.641 -3.650 -3.303 6 F_C9:G9_E F 9 ? E 9 ? 19 1 1 C G 3 1_555 D C 2 1_555 -1.070 -0.502 -0.030 -3.531 -6.245 -2.019 7 F_G10:C8_E F 10 ? E 8 ? 19 1 1 C C 4 1_555 D G 1 1_555 0.396 -0.392 -0.179 3.444 1.505 -3.337 8 F_C11:G7_E F 11 ? E 7 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 1 1_555 B G 4 1_555 A G 2 1_555 B C 3 1_555 -0.092 -2.488 3.420 0.531 8.202 19.917 -9.619 0.439 2.226 22.514 -1.459 21.530 1 AA_C8G9:C9G10_BB A 8 ? B 10 ? A 9 ? B 9 ? 1 A G 2 1_555 B C 3 1_555 A C 3 1_555 B G 2 1_555 -0.002 -1.815 3.196 -0.414 4.915 38.711 -3.277 -0.045 2.952 7.378 0.621 39.012 2 AA_G9C10:G8C9_BB A 9 ? B 9 ? A 10 ? B 8 ? 1 A C 3 1_555 B G 2 1_555 A G 4 1_555 B C 1 1_555 0.262 -2.535 3.290 1.111 3.633 21.903 -7.870 -0.283 2.847 9.470 -2.895 22.226 3 AA_C10G11:C7G8_BB A 10 ? B 8 ? A 11 ? B 7 ? 1 A G 4 1_555 B C 1 1_555 C G 1 1_555 D C 4 1_555 -0.219 -2.546 3.240 -1.944 2.033 26.418 -6.057 -0.017 3.046 4.433 4.237 26.565 4 AF_G11G8:C10C7_EB A 11 ? B 7 ? F 8 ? E 10 ? 1 C G 1 1_555 D C 4 1_555 C C 2 1_555 D G 3 1_555 -0.150 -1.873 3.209 1.641 4.009 39.996 -3.157 0.396 3.007 5.841 -2.391 40.221 5 FF_G8C9:G9C10_EE F 8 ? E 10 ? F 9 ? E 9 ? 1 C C 2 1_555 D G 3 1_555 C G 3 1_555 D C 2 1_555 0.447 -2.560 3.397 0.546 9.454 18.541 -10.577 -1.037 1.889 27.165 -1.570 20.801 6 FF_C9G10:C8G9_EE F 9 ? E 9 ? F 10 ? E 8 ? 1 C G 3 1_555 D C 2 1_555 C C 4 1_555 D G 1 1_555 0.259 -1.979 3.140 1.683 1.399 38.842 -3.133 -0.194 3.078 2.102 -2.528 38.901 7 FF_G10C11:G7C8_EE F 10 ? E 8 ? F 11 ? E 7 ? # _atom_sites.entry_id 4E6B _atom_sites.fract_transf_matrix[1][1] 0.025139 _atom_sites.fract_transf_matrix[1][2] 0.014514 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029028 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.028653 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P # loop_