HEADER TRANSFERASE/TRANSFERASE INHIBITOR 15-MAR-12 4E6Q TITLE JAK2 KINASE (JH1 DOMAIN) TRIPLE MUTANT IN COMPLEX WITH COMPOUND 12 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE JAK2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: KINASE DOMAIN, UNP RESIDUES 835-1132; COMPND 5 SYNONYM: JANUS KINASE 2, JAK-2; COMPND 6 EC: 2.7.10.2; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: JAK2; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: BACULOVIRUS KEYWDS JAK2, KINASE DOMAIN, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.M.MURRAY REVDAT 2 11-JUL-12 4E6Q 1 JRNL REVDAT 1 30-MAY-12 4E6Q 0 JRNL AUTH J.J.KULAGOWSKI,W.BLAIR,R.J.BULL,C.CHANG,G.DESHMUKH,H.J.DYKE, JRNL AUTH 2 C.EIGENBROT,N.GHILARDI,P.GIBBONS,T.K.HARRISON,P.R.HEWITT, JRNL AUTH 3 M.LIIMATTA,C.A.HURLEY,A.JOHNSON,T.JOHNSON,J.R.KENNY, JRNL AUTH 4 P.BIR KOHLI,R.J.MAXEY,R.MENDONCA,K.MORTARA,J.MURRAY, JRNL AUTH 5 R.NARUKULLA,S.SHIA,M.STEFFEK,S.UBHAYAKAR,M.ULTSCH, JRNL AUTH 6 A.VAN ABBEMA,S.I.WARD,B.WASZKOWYCZ,M.ZAK JRNL TITL IDENTIFICATION OF IMIDAZO-PYRROLOPYRIDINES AS NOVEL AND JRNL TITL 2 POTENT JAK1 INHIBITORS. JRNL REF J.MED.CHEM. V. 55 5901 2012 JRNL REFN ISSN 0022-2623 JRNL PMID 22591402 JRNL DOI 10.1021/JM300438J REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_991) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.50 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 51908 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 2642 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.2531 - 5.1832 0.95 2696 130 0.2144 0.2423 REMARK 3 2 5.1832 - 4.1199 0.94 2627 146 0.1651 0.2048 REMARK 3 3 4.1199 - 3.6008 0.92 2548 166 0.1564 0.2066 REMARK 3 4 3.6008 - 3.2723 0.95 2685 127 0.1541 0.2152 REMARK 3 5 3.2723 - 3.0382 0.94 2579 125 0.1683 0.2010 REMARK 3 6 3.0382 - 2.8593 0.95 2658 144 0.1715 0.2190 REMARK 3 7 2.8593 - 2.7163 0.94 2605 149 0.1747 0.2283 REMARK 3 8 2.7163 - 2.5982 0.95 2630 125 0.1801 0.2561 REMARK 3 9 2.5982 - 2.4983 0.94 2594 140 0.1869 0.2566 REMARK 3 10 2.4983 - 2.4121 0.95 2597 131 0.1876 0.2352 REMARK 3 11 2.4121 - 2.3367 0.95 2657 140 0.1962 0.2291 REMARK 3 12 2.3367 - 2.2700 0.92 2546 137 0.2100 0.2885 REMARK 3 13 2.2700 - 2.2103 0.90 2476 137 0.2580 0.3325 REMARK 3 14 2.2103 - 2.1564 0.94 2598 151 0.1989 0.2402 REMARK 3 15 2.1564 - 2.1074 0.94 2605 143 0.2052 0.2350 REMARK 3 16 2.1074 - 2.0626 0.93 2571 131 0.2285 0.2866 REMARK 3 17 2.0626 - 2.0213 0.93 2569 136 0.2121 0.2677 REMARK 3 18 2.0213 - 1.9832 0.93 2592 120 0.2187 0.2915 REMARK 3 19 1.9832 - 1.9480 0.89 2435 131 0.2385 0.2800 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 48.50 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.48510 REMARK 3 B22 (A**2) : 5.85470 REMARK 3 B33 (A**2) : -1.36960 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.75090 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.2200 REMARK 3 OPERATOR: H,-K,-L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.020 5044 REMARK 3 ANGLE : 1.920 6805 REMARK 3 CHIRALITY : 0.138 705 REMARK 3 PLANARITY : 0.008 883 REMARK 3 DIHEDRAL : 17.130 1925 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 838:992 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.7951 24.0984 14.7405 REMARK 3 T TENSOR REMARK 3 T11: 0.1141 T22: 0.2436 REMARK 3 T33: 0.1201 T12: -0.0421 REMARK 3 T13: -0.0346 T23: 0.0123 REMARK 3 L TENSOR REMARK 3 L11: 2.0231 L22: 0.9360 REMARK 3 L33: 1.5193 L12: -0.6362 REMARK 3 L13: -0.6562 L23: -0.0561 REMARK 3 S TENSOR REMARK 3 S11: 0.0544 S12: 0.1367 S13: 0.0976 REMARK 3 S21: -0.0134 S22: -0.0353 S23: 0.0414 REMARK 3 S31: -0.1236 S32: 0.1327 S33: -0.0264 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 993:1132 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.4094 15.2962 -2.2036 REMARK 3 T TENSOR REMARK 3 T11: 0.1096 T22: 0.3451 REMARK 3 T33: 0.1249 T12: -0.0056 REMARK 3 T13: -0.0141 T23: 0.0146 REMARK 3 L TENSOR REMARK 3 L11: 1.1775 L22: 0.6225 REMARK 3 L33: 1.7679 L12: 0.2847 REMARK 3 L13: 0.7666 L23: 0.4123 REMARK 3 S TENSOR REMARK 3 S11: -0.0153 S12: 0.1164 S13: 0.0969 REMARK 3 S21: -0.0204 S22: -0.0250 S23: 0.0116 REMARK 3 S31: -0.0292 S32: 0.2783 S33: 0.0314 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN B AND RESID 838:992 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.9444 50.9905 20.0648 REMARK 3 T TENSOR REMARK 3 T11: 0.1068 T22: 0.1410 REMARK 3 T33: 0.1167 T12: 0.0193 REMARK 3 T13: -0.0012 T23: -0.0274 REMARK 3 L TENSOR REMARK 3 L11: 2.6536 L22: 0.6716 REMARK 3 L33: 1.3788 L12: 0.0772 REMARK 3 L13: 1.2310 L23: -0.0823 REMARK 3 S TENSOR REMARK 3 S11: 0.0634 S12: 0.1042 S13: -0.2128 REMARK 3 S21: 0.0292 S22: 0.0209 S23: 0.0353 REMARK 3 S31: 0.0727 S32: 0.0171 S33: -0.0899 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN B AND RESID 993:1132 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.1989 59.6024 37.2020 REMARK 3 T TENSOR REMARK 3 T11: 0.0962 T22: 0.2150 REMARK 3 T33: 0.1191 T12: -0.0133 REMARK 3 T13: -0.0234 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 1.3897 L22: 0.9568 REMARK 3 L33: 2.1164 L12: -0.3588 REMARK 3 L13: -0.4075 L23: 0.5177 REMARK 3 S TENSOR REMARK 3 S11: -0.0128 S12: -0.1412 S13: -0.0246 REMARK 3 S21: 0.0721 S22: 0.0113 S23: 0.0057 REMARK 3 S31: 0.0175 S32: 0.2272 S33: 0.0115 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4E6Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAR-12. REMARK 100 THE RCSB ID CODE IS RCSB071238. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-OCT-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DTREK REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52039 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.948 REMARK 200 RESOLUTION RANGE LOW (A) : 50.502 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06900 REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.35700 REMARK 200 R SYM FOR SHELL (I) : 0.35700 REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.025 M BICINE PH 8.5, 0.25 M NACL, REMARK 280 20% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 51.92700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 874 CG OD1 ND2 REMARK 470 ARG A 893 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1069 CG CD CE NZ REMARK 470 ARG B 853 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 893 CG CD NE CZ NH1 NH2 REMARK 470 LYS B1069 CG CD CE NZ REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 ASP A 873 REMARK 475 ASN A 874 REMARK 475 THR A 875 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 889 CE MET B 1073 2546 1.59 REMARK 500 NH2 ARG A 839 OE1 GLU B 890 2546 2.12 REMARK 500 OE2 GLU A 889 CG MET B 1073 2546 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 975 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 975 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG B 975 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG B 975 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 840 88.61 -150.75 REMARK 500 LEU A 852 -50.29 -120.27 REMARK 500 ASN A 874 5.69 91.26 REMARK 500 ASP A 976 39.86 -159.28 REMARK 500 ASN A1085 16.08 81.66 REMARK 500 TRP A1106 42.23 -92.09 REMARK 500 ASP B 840 81.44 -151.55 REMARK 500 GLN B 872 -3.22 66.58 REMARK 500 ASN B 874 41.01 74.78 REMARK 500 GLN B 885 -64.70 -96.13 REMARK 500 HIS B 886 68.05 -110.08 REMARK 500 ARG B 975 -0.29 73.85 REMARK 500 ASP B 976 34.32 -141.46 REMARK 500 TYR B1050 28.28 48.23 REMARK 500 TRP B1106 40.29 -93.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1345 DISTANCE = 5.40 ANGSTROMS REMARK 525 HOH A1387 DISTANCE = 6.35 ANGSTROMS REMARK 525 HOH B1352 DISTANCE = 5.31 ANGSTROMS REMARK 525 HOH B1390 DISTANCE = 5.05 ANGSTROMS REMARK 525 HOH B1396 DISTANCE = 6.23 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0NV A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0NV B 1201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4E4L RELATED DB: PDB REMARK 900 RELATED ID: 4E4M RELATED DB: PDB REMARK 900 RELATED ID: 4E4N RELATED DB: PDB REMARK 900 RELATED ID: 4E5W RELATED DB: PDB REMARK 900 RELATED ID: 4E6D RELATED DB: PDB DBREF 4E6Q A 835 1132 UNP O60674 JAK2_HUMAN 835 1132 DBREF 4E6Q B 835 1132 UNP O60674 JAK2_HUMAN 835 1132 SEQADV 4E6Q ARG A 853 UNP O60674 GLN 853 ENGINEERED MUTATION SEQADV 4E6Q PHE A 931 UNP O60674 TYR 931 ENGINEERED MUTATION SEQADV 4E6Q GLU A 939 UNP O60674 ASP 939 ENGINEERED MUTATION SEQADV 4E6Q ARG B 853 UNP O60674 GLN 853 ENGINEERED MUTATION SEQADV 4E6Q PHE B 931 UNP O60674 TYR 931 ENGINEERED MUTATION SEQADV 4E6Q GLU B 939 UNP O60674 ASP 939 ENGINEERED MUTATION SEQRES 1 A 298 ALA PHE GLU ASP ARG ASP PRO THR GLN PHE GLU GLU ARG SEQRES 2 A 298 HIS LEU LYS PHE LEU ARG GLN LEU GLY LYS GLY ASN PHE SEQRES 3 A 298 GLY SER VAL GLU MET CYS ARG TYR ASP PRO LEU GLN ASP SEQRES 4 A 298 ASN THR GLY GLU VAL VAL ALA VAL LYS LYS LEU GLN HIS SEQRES 5 A 298 SER THR GLU GLU HIS LEU ARG ASP PHE GLU ARG GLU ILE SEQRES 6 A 298 GLU ILE LEU LYS SER LEU GLN HIS ASP ASN ILE VAL LYS SEQRES 7 A 298 TYR LYS GLY VAL CYS TYR SER ALA GLY ARG ARG ASN LEU SEQRES 8 A 298 LYS LEU ILE MET GLU PHE LEU PRO TYR GLY SER LEU ARG SEQRES 9 A 298 GLU TYR LEU GLN LYS HIS LYS GLU ARG ILE ASP HIS ILE SEQRES 10 A 298 LYS LEU LEU GLN TYR THR SER GLN ILE CYS LYS GLY MET SEQRES 11 A 298 GLU TYR LEU GLY THR LYS ARG TYR ILE HIS ARG ASP LEU SEQRES 12 A 298 ALA THR ARG ASN ILE LEU VAL GLU ASN GLU ASN ARG VAL SEQRES 13 A 298 LYS ILE GLY ASP PHE GLY LEU THR LYS VAL LEU PRO GLN SEQRES 14 A 298 ASP LYS GLU PTR PTR LYS VAL LYS GLU PRO GLY GLU SER SEQRES 15 A 298 PRO ILE PHE TRP TYR ALA PRO GLU SER LEU THR GLU SER SEQRES 16 A 298 LYS PHE SER VAL ALA SER ASP VAL TRP SER PHE GLY VAL SEQRES 17 A 298 VAL LEU TYR GLU LEU PHE THR TYR ILE GLU LYS SER LYS SEQRES 18 A 298 SER PRO PRO ALA GLU PHE MET ARG MET ILE GLY ASN ASP SEQRES 19 A 298 LYS GLN GLY GLN MET ILE VAL PHE HIS LEU ILE GLU LEU SEQRES 20 A 298 LEU LYS ASN ASN GLY ARG LEU PRO ARG PRO ASP GLY CYS SEQRES 21 A 298 PRO ASP GLU ILE TYR MET ILE MET THR GLU CYS TRP ASN SEQRES 22 A 298 ASN ASN VAL ASN GLN ARG PRO SER PHE ARG ASP LEU ALA SEQRES 23 A 298 LEU ARG VAL ASP GLN ILE ARG ASP ASN MET ALA GLY SEQRES 1 B 298 ALA PHE GLU ASP ARG ASP PRO THR GLN PHE GLU GLU ARG SEQRES 2 B 298 HIS LEU LYS PHE LEU ARG GLN LEU GLY LYS GLY ASN PHE SEQRES 3 B 298 GLY SER VAL GLU MET CYS ARG TYR ASP PRO LEU GLN ASP SEQRES 4 B 298 ASN THR GLY GLU VAL VAL ALA VAL LYS LYS LEU GLN HIS SEQRES 5 B 298 SER THR GLU GLU HIS LEU ARG ASP PHE GLU ARG GLU ILE SEQRES 6 B 298 GLU ILE LEU LYS SER LEU GLN HIS ASP ASN ILE VAL LYS SEQRES 7 B 298 TYR LYS GLY VAL CYS TYR SER ALA GLY ARG ARG ASN LEU SEQRES 8 B 298 LYS LEU ILE MET GLU PHE LEU PRO TYR GLY SER LEU ARG SEQRES 9 B 298 GLU TYR LEU GLN LYS HIS LYS GLU ARG ILE ASP HIS ILE SEQRES 10 B 298 LYS LEU LEU GLN TYR THR SER GLN ILE CYS LYS GLY MET SEQRES 11 B 298 GLU TYR LEU GLY THR LYS ARG TYR ILE HIS ARG ASP LEU SEQRES 12 B 298 ALA THR ARG ASN ILE LEU VAL GLU ASN GLU ASN ARG VAL SEQRES 13 B 298 LYS ILE GLY ASP PHE GLY LEU THR LYS VAL LEU PRO GLN SEQRES 14 B 298 ASP LYS GLU PTR PTR LYS VAL LYS GLU PRO GLY GLU SER SEQRES 15 B 298 PRO ILE PHE TRP TYR ALA PRO GLU SER LEU THR GLU SER SEQRES 16 B 298 LYS PHE SER VAL ALA SER ASP VAL TRP SER PHE GLY VAL SEQRES 17 B 298 VAL LEU TYR GLU LEU PHE THR TYR ILE GLU LYS SER LYS SEQRES 18 B 298 SER PRO PRO ALA GLU PHE MET ARG MET ILE GLY ASN ASP SEQRES 19 B 298 LYS GLN GLY GLN MET ILE VAL PHE HIS LEU ILE GLU LEU SEQRES 20 B 298 LEU LYS ASN ASN GLY ARG LEU PRO ARG PRO ASP GLY CYS SEQRES 21 B 298 PRO ASP GLU ILE TYR MET ILE MET THR GLU CYS TRP ASN SEQRES 22 B 298 ASN ASN VAL ASN GLN ARG PRO SER PHE ARG ASP LEU ALA SEQRES 23 B 298 LEU ARG VAL ASP GLN ILE ARG ASP ASN MET ALA GLY MODRES 4E6Q PTR A 1007 TYR O-PHOSPHOTYROSINE MODRES 4E6Q PTR A 1008 TYR O-PHOSPHOTYROSINE MODRES 4E6Q PTR B 1007 TYR O-PHOSPHOTYROSINE MODRES 4E6Q PTR B 1008 TYR O-PHOSPHOTYROSINE HET PTR A1007 16 HET PTR A1008 16 HET PTR B1007 16 HET PTR B1008 16 HET 0NV A1201 25 HET 0NV B1201 25 HETNAM PTR O-PHOSPHOTYROSINE HETNAM 0NV 1-(1-BENZYLPIPERIDIN-4-YL)-1,6-DIHYDROIMIDAZO[4,5- HETNAM 2 0NV D]PYRROLO[2,3-B]PYRIDINE HETSYN PTR PHOSPHONOTYROSINE FORMUL 1 PTR 4(C9 H12 N O6 P) FORMUL 3 0NV 2(C20 H21 N5) FORMUL 5 HOH *183(H2 O) HELIX 1 1 GLU A 845 ARG A 847 5 3 HELIX 2 2 THR A 888 SER A 904 1 17 HELIX 3 3 TYR A 918 ARG A 923 1 6 HELIX 4 4 SER A 936 HIS A 944 1 9 HELIX 5 5 ASP A 949 LYS A 970 1 22 HELIX 6 6 ALA A 978 ARG A 980 5 3 HELIX 7 7 ALA A 1022 SER A 1029 1 8 HELIX 8 8 SER A 1032 THR A 1049 1 18 HELIX 9 9 GLU A 1052 LYS A 1055 5 4 HELIX 10 10 SER A 1056 GLY A 1066 1 11 HELIX 11 11 GLY A 1071 ASN A 1084 1 14 HELIX 12 12 PRO A 1095 TRP A 1106 1 12 HELIX 13 13 ASN A 1109 ARG A 1113 5 5 HELIX 14 14 SER A 1115 MET A 1130 1 16 HELIX 15 15 GLU B 845 ARG B 847 5 3 HELIX 16 16 THR B 888 LEU B 905 1 18 HELIX 17 17 TYR B 918 ARG B 923 1 6 HELIX 18 18 SER B 936 LYS B 945 1 10 HELIX 19 19 ASP B 949 LYS B 970 1 22 HELIX 20 20 ALA B 978 ARG B 980 5 3 HELIX 21 21 PRO B 1017 TYR B 1021 5 5 HELIX 22 22 ALA B 1022 SER B 1029 1 8 HELIX 23 23 SER B 1032 THR B 1049 1 18 HELIX 24 24 GLU B 1052 LYS B 1055 5 4 HELIX 25 25 SER B 1056 GLY B 1066 1 11 HELIX 26 26 GLN B 1070 ASN B 1084 1 15 HELIX 27 27 PRO B 1095 TRP B 1106 1 12 HELIX 28 28 ASN B 1109 ARG B 1113 5 5 HELIX 29 29 SER B 1115 GLY B 1132 1 18 SHEET 1 A 6 GLN A 843 PHE A 844 0 SHEET 2 A 6 TYR A 913 CYS A 917 1 O VAL A 916 N PHE A 844 SHEET 3 A 6 LYS A 926 GLU A 930 -1 O ILE A 928 N LYS A 914 SHEET 4 A 6 VAL A 878 LEU A 884 -1 N ALA A 880 O MET A 929 SHEET 5 A 6 GLY A 861 TYR A 868 -1 N GLU A 864 O VAL A 881 SHEET 6 A 6 LEU A 849 LYS A 857 -1 N LEU A 855 O VAL A 863 SHEET 1 B 2 TYR A 972 ILE A 973 0 SHEET 2 B 2 LYS A 999 VAL A1000 -1 O LYS A 999 N ILE A 973 SHEET 1 C 2 ILE A 982 ASN A 986 0 SHEET 2 C 2 ARG A 989 ILE A 992 -1 O LYS A 991 N LEU A 983 SHEET 1 D 2 PTR A1008 LYS A1009 0 SHEET 2 D 2 LYS A1030 PHE A1031 -1 O PHE A1031 N PTR A1008 SHEET 1 E 5 LEU B 849 LYS B 857 0 SHEET 2 E 5 GLY B 861 TYR B 868 -1 O VAL B 863 N LEU B 855 SHEET 3 E 5 GLU B 877 LEU B 884 -1 O GLU B 877 N TYR B 868 SHEET 4 E 5 LYS B 926 GLU B 930 -1 O MET B 929 N ALA B 880 SHEET 5 E 5 TYR B 913 CYS B 917 -1 N GLY B 915 O ILE B 928 SHEET 1 F 2 TYR B 972 ILE B 973 0 SHEET 2 F 2 LYS B 999 VAL B1000 -1 O LYS B 999 N ILE B 973 SHEET 1 G 2 ILE B 982 ASN B 986 0 SHEET 2 G 2 ARG B 989 ILE B 992 -1 O LYS B 991 N LEU B 983 SHEET 1 H 2 PTR B1008 LYS B1009 0 SHEET 2 H 2 LYS B1030 PHE B1031 -1 O PHE B1031 N PTR B1008 LINK C GLU A1006 N PTR A1007 1555 1555 1.34 LINK C PTR A1007 N PTR A1008 1555 1555 1.34 LINK C PTR A1008 N LYS A1009 1555 1555 1.33 LINK C GLU B1006 N PTR B1007 1555 1555 1.35 LINK C PTR B1007 N PTR B1008 1555 1555 1.34 LINK C PTR B1008 N LYS B1009 1555 1555 1.33 SITE 1 AC1 13 LYS A 857 GLY A 858 VAL A 863 ALA A 880 SITE 2 AC1 13 GLU A 930 PHE A 931 LEU A 932 GLY A 935 SITE 3 AC1 13 ARG A 980 ASN A 981 LEU A 983 ASP A 994 SITE 4 AC1 13 HOH A1328 SITE 1 AC2 11 GLY B 858 GLY B 861 VAL B 863 ALA B 880 SITE 2 AC2 11 GLU B 930 PHE B 931 LEU B 932 GLY B 935 SITE 3 AC2 11 ARG B 980 ASN B 981 LEU B 983 CRYST1 50.502 103.854 69.999 90.00 90.02 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019801 0.000000 0.000008 0.00000 SCALE2 0.000000 0.009629 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014286 0.00000