HEADER HYDROLASE 20-MAR-12 4E8D TITLE CRYSTAL STRUCTURE OF STREPTOCOCCAL BETA-GALACTOSIDASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOSYL HYDROLASE, FAMILY 35; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BETA-GALACTOSIDASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 170187; SOURCE 4 STRAIN: TIGR4; SOURCE 5 GENE: SP_0060; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: P21 KEYWDS TIM BARREL, BETA-PROPELLER, GLYCOHYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR W.CHENG,L.WANG,X.H.BAI,Y.L.JIANG,Q.LI,G.YU,C.Z.ZHOU,Y.X.CHEN REVDAT 4 08-NOV-23 4E8D 1 REMARK REVDAT 3 07-AUG-13 4E8D 1 JRNL REVDAT 2 13-JUN-12 4E8D 1 JRNL REVDAT 1 30-MAY-12 4E8D 0 JRNL AUTH W.CHENG,L.WANG,Y.L.JIANG,X.H.BAI,J.CHU,Q.LI,G.YU,Q.L.LIANG, JRNL AUTH 2 C.Z.ZHOU,Y.X.CHEN JRNL TITL STRUCTURAL INSIGHTS INTO THE SUBSTRATE SPECIFICITY OF JRNL TITL 2 STREPTOCOCCUS PNEUMONIAE BETA (1,3)-GALACTOSIDASE BGAC JRNL REF J.BIOL.CHEM. V. 287 22910 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 22593580 JRNL DOI 10.1074/JBC.M112.367128 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0066 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 103282 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5411 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7718 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.1990 REMARK 3 BIN FREE R VALUE SET COUNT : 397 REMARK 3 BIN FREE R VALUE : 0.2210 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9697 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 78 REMARK 3 SOLVENT ATOMS : 871 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.36000 REMARK 3 B22 (A**2) : 1.63000 REMARK 3 B33 (A**2) : -0.38000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.20000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.134 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.124 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.070 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.188 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 10036 ; 0.005 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 13572 ; 0.929 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1182 ; 5.361 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 512 ;35.038 ;24.141 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1687 ;11.460 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 56 ;17.164 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1384 ; 0.066 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7762 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5883 ; 0.410 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 9467 ; 0.823 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4153 ; 1.358 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4105 ; 2.314 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4E8D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-MAR-12. REMARK 100 THE DEPOSITION ID IS D_1000071297. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-SEP-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9798 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 108735 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.07000 REMARK 200 R SYM FOR SHELL (I) : 0.07000 REMARK 200 FOR SHELL : 14.30 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 3D3A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.65000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 592 REMARK 465 GLU A 593 REMARK 465 ASN A 594 REMARK 465 LEU A 595 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 7 -128.87 -122.56 REMARK 500 PRO A 91 41.07 -94.36 REMARK 500 CYS A 96 -99.87 63.22 REMARK 500 GLU A 154 -158.21 54.36 REMARK 500 ASN A 155 111.01 -162.29 REMARK 500 TYR A 160 -43.69 -145.61 REMARK 500 PRO A 189 46.85 -87.06 REMARK 500 SER A 212 -179.96 -173.51 REMARK 500 GLN A 424 -111.71 48.34 REMARK 500 LYS A 436 122.46 -39.82 REMARK 500 ASP A 475 -118.54 55.60 REMARK 500 ASN A 481 85.37 69.74 REMARK 500 TRP A 544 119.77 -162.69 REMARK 500 ARG B 7 -132.96 -115.90 REMARK 500 PRO B 91 37.71 -93.54 REMARK 500 CYS B 96 -99.37 64.14 REMARK 500 GLU B 154 -155.80 56.05 REMARK 500 ASN B 155 113.95 -163.37 REMARK 500 TYR B 160 -43.72 -141.90 REMARK 500 GLU B 162 25.56 -140.26 REMARK 500 PRO B 189 48.63 -89.20 REMARK 500 SER B 212 -178.30 -172.61 REMARK 500 LYS B 248 -9.73 81.00 REMARK 500 ASP B 405 61.16 64.31 REMARK 500 GLN B 424 -110.41 47.64 REMARK 500 ASP B 475 -114.38 53.92 REMARK 500 ASN B 481 81.48 73.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 609 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4E8C RELATED DB: PDB DBREF 4E8D A 1 595 UNP Q97T90 Q97T90_STRPN 1 595 DBREF 4E8D B 1 595 UNP Q97T90 Q97T90_STRPN 1 595 SEQRES 1 A 595 MET THR ARG PHE GLU ILE ARG ASP ASP PHE TYR LEU ASP SEQRES 2 A 595 GLY LYS SER PHE LYS ILE LEU SER GLY ALA ILE HIS TYR SEQRES 3 A 595 PHE ARG VAL PRO PRO GLU ASP TRP TYR HIS SER LEU TYR SEQRES 4 A 595 ASN LEU LYS ALA LEU GLY PHE ASN THR VAL GLU THR TYR SEQRES 5 A 595 VAL ALA TRP ASN LEU HIS GLU PRO CYS GLU GLY GLU PHE SEQRES 6 A 595 HIS PHE GLU GLY ASP LEU ASP LEU GLU LYS PHE LEU GLN SEQRES 7 A 595 ILE ALA GLN ASP LEU GLY LEU TYR ALA ILE VAL ARG PRO SEQRES 8 A 595 SER PRO PHE ILE CYS ALA GLU TRP GLU PHE GLY GLY LEU SEQRES 9 A 595 PRO ALA TRP LEU LEU THR LYS ASN MET ARG ILE ARG SER SEQRES 10 A 595 SER ASP PRO ALA TYR ILE GLU ALA VAL GLY ARG TYR TYR SEQRES 11 A 595 ASP GLN LEU LEU PRO ARG LEU VAL PRO ARG LEU LEU ASP SEQRES 12 A 595 ASN GLY GLY ASN ILE LEU MET MET GLN VAL GLU ASN GLU SEQRES 13 A 595 TYR GLY SER TYR GLY GLU ASP LYS ALA TYR LEU ARG ALA SEQRES 14 A 595 ILE ARG GLN LEU MET GLU GLU CYS GLY VAL THR CYS PRO SEQRES 15 A 595 LEU PHE THR SER ASP GLY PRO TRP ARG ALA THR LEU LYS SEQRES 16 A 595 ALA GLY THR LEU ILE GLU GLU ASP LEU PHE VAL THR GLY SEQRES 17 A 595 ASN PHE GLY SER LYS ALA PRO TYR ASN PHE SER GLN MET SEQRES 18 A 595 GLN GLU PHE PHE ASP GLU HIS GLY LYS LYS TRP PRO LEU SEQRES 19 A 595 MET CYS MET GLU PHE TRP ASP GLY TRP PHE ASN ARG TRP SEQRES 20 A 595 LYS GLU PRO ILE ILE THR ARG ASP PRO LYS GLU LEU ALA SEQRES 21 A 595 ASP ALA VAL ARG GLU VAL LEU GLU GLN GLY SER ILE ASN SEQRES 22 A 595 LEU TYR MET PHE HIS GLY GLY THR ASN PHE GLY PHE MET SEQRES 23 A 595 ASN GLY CYS SER ALA ARG GLY THR LEU ASP LEU PRO GLN SEQRES 24 A 595 VAL THR SER TYR ASP TYR ASP ALA LEU LEU ASP GLU GLU SEQRES 25 A 595 GLY ASN PRO THR ALA LYS TYR LEU ALA VAL LYS LYS MET SEQRES 26 A 595 MET ALA THR HIS PHE SER GLU TYR PRO GLN LEU GLU PRO SEQRES 27 A 595 LEU TYR LYS GLU SER MET GLU LEU ASP ALA ILE PRO LEU SEQRES 28 A 595 VAL GLU LYS VAL SER LEU PHE GLU THR LEU ASP SER LEU SEQRES 29 A 595 SER SER PRO VAL GLU SER LEU TYR PRO GLN LYS MET GLU SEQRES 30 A 595 GLU LEU GLY GLN SER TYR GLY TYR LEU LEU TYR ARG THR SEQRES 31 A 595 GLU THR ASN TRP ASP ALA GLU GLU GLU ARG LEU ARG ILE SEQRES 32 A 595 ILE ASP GLY ARG ASP ARG ALA GLN LEU TYR VAL ASP GLY SEQRES 33 A 595 GLN TRP VAL LYS THR GLN TYR GLN THR GLU ILE GLY GLU SEQRES 34 A 595 ASP ILE PHE TYR GLN GLY LYS LYS LYS GLY LEU SER ARG SEQRES 35 A 595 LEU ASP ILE LEU ILE GLU ASN MET GLY ARG VAL ASN TYR SEQRES 36 A 595 GLY HIS LYS PHE LEU ALA ASP THR GLN ARG LYS GLY ILE SEQRES 37 A 595 ARG THR GLY VAL CYS LYS ASP LEU HIS PHE LEU LEU ASN SEQRES 38 A 595 TRP LYS HIS TYR PRO LEU PRO LEU ASP ASN PRO GLU LYS SEQRES 39 A 595 ILE ASP PHE SER LYS GLY TRP THR GLN GLY GLN PRO ALA SEQRES 40 A 595 PHE TYR ALA TYR ASP PHE THR VAL GLU GLU PRO LYS ASP SEQRES 41 A 595 THR TYR LEU ASP LEU SER GLU PHE GLY LYS GLY VAL ALA SEQRES 42 A 595 PHE VAL ASN GLY GLN ASN LEU GLY ARG PHE TRP ASN VAL SEQRES 43 A 595 GLY PRO THR LEU SER LEU TYR ILE PRO HIS SER TYR LEU SEQRES 44 A 595 LYS GLU GLY ALA ASN ARG ILE ILE ILE PHE GLU THR GLU SEQRES 45 A 595 GLY GLN TYR LYS GLU GLU ILE HIS LEU THR ARG LYS PRO SEQRES 46 A 595 THR LEU LYS HIS ILE LYS GLY GLU ASN LEU SEQRES 1 B 595 MET THR ARG PHE GLU ILE ARG ASP ASP PHE TYR LEU ASP SEQRES 2 B 595 GLY LYS SER PHE LYS ILE LEU SER GLY ALA ILE HIS TYR SEQRES 3 B 595 PHE ARG VAL PRO PRO GLU ASP TRP TYR HIS SER LEU TYR SEQRES 4 B 595 ASN LEU LYS ALA LEU GLY PHE ASN THR VAL GLU THR TYR SEQRES 5 B 595 VAL ALA TRP ASN LEU HIS GLU PRO CYS GLU GLY GLU PHE SEQRES 6 B 595 HIS PHE GLU GLY ASP LEU ASP LEU GLU LYS PHE LEU GLN SEQRES 7 B 595 ILE ALA GLN ASP LEU GLY LEU TYR ALA ILE VAL ARG PRO SEQRES 8 B 595 SER PRO PHE ILE CYS ALA GLU TRP GLU PHE GLY GLY LEU SEQRES 9 B 595 PRO ALA TRP LEU LEU THR LYS ASN MET ARG ILE ARG SER SEQRES 10 B 595 SER ASP PRO ALA TYR ILE GLU ALA VAL GLY ARG TYR TYR SEQRES 11 B 595 ASP GLN LEU LEU PRO ARG LEU VAL PRO ARG LEU LEU ASP SEQRES 12 B 595 ASN GLY GLY ASN ILE LEU MET MET GLN VAL GLU ASN GLU SEQRES 13 B 595 TYR GLY SER TYR GLY GLU ASP LYS ALA TYR LEU ARG ALA SEQRES 14 B 595 ILE ARG GLN LEU MET GLU GLU CYS GLY VAL THR CYS PRO SEQRES 15 B 595 LEU PHE THR SER ASP GLY PRO TRP ARG ALA THR LEU LYS SEQRES 16 B 595 ALA GLY THR LEU ILE GLU GLU ASP LEU PHE VAL THR GLY SEQRES 17 B 595 ASN PHE GLY SER LYS ALA PRO TYR ASN PHE SER GLN MET SEQRES 18 B 595 GLN GLU PHE PHE ASP GLU HIS GLY LYS LYS TRP PRO LEU SEQRES 19 B 595 MET CYS MET GLU PHE TRP ASP GLY TRP PHE ASN ARG TRP SEQRES 20 B 595 LYS GLU PRO ILE ILE THR ARG ASP PRO LYS GLU LEU ALA SEQRES 21 B 595 ASP ALA VAL ARG GLU VAL LEU GLU GLN GLY SER ILE ASN SEQRES 22 B 595 LEU TYR MET PHE HIS GLY GLY THR ASN PHE GLY PHE MET SEQRES 23 B 595 ASN GLY CYS SER ALA ARG GLY THR LEU ASP LEU PRO GLN SEQRES 24 B 595 VAL THR SER TYR ASP TYR ASP ALA LEU LEU ASP GLU GLU SEQRES 25 B 595 GLY ASN PRO THR ALA LYS TYR LEU ALA VAL LYS LYS MET SEQRES 26 B 595 MET ALA THR HIS PHE SER GLU TYR PRO GLN LEU GLU PRO SEQRES 27 B 595 LEU TYR LYS GLU SER MET GLU LEU ASP ALA ILE PRO LEU SEQRES 28 B 595 VAL GLU LYS VAL SER LEU PHE GLU THR LEU ASP SER LEU SEQRES 29 B 595 SER SER PRO VAL GLU SER LEU TYR PRO GLN LYS MET GLU SEQRES 30 B 595 GLU LEU GLY GLN SER TYR GLY TYR LEU LEU TYR ARG THR SEQRES 31 B 595 GLU THR ASN TRP ASP ALA GLU GLU GLU ARG LEU ARG ILE SEQRES 32 B 595 ILE ASP GLY ARG ASP ARG ALA GLN LEU TYR VAL ASP GLY SEQRES 33 B 595 GLN TRP VAL LYS THR GLN TYR GLN THR GLU ILE GLY GLU SEQRES 34 B 595 ASP ILE PHE TYR GLN GLY LYS LYS LYS GLY LEU SER ARG SEQRES 35 B 595 LEU ASP ILE LEU ILE GLU ASN MET GLY ARG VAL ASN TYR SEQRES 36 B 595 GLY HIS LYS PHE LEU ALA ASP THR GLN ARG LYS GLY ILE SEQRES 37 B 595 ARG THR GLY VAL CYS LYS ASP LEU HIS PHE LEU LEU ASN SEQRES 38 B 595 TRP LYS HIS TYR PRO LEU PRO LEU ASP ASN PRO GLU LYS SEQRES 39 B 595 ILE ASP PHE SER LYS GLY TRP THR GLN GLY GLN PRO ALA SEQRES 40 B 595 PHE TYR ALA TYR ASP PHE THR VAL GLU GLU PRO LYS ASP SEQRES 41 B 595 THR TYR LEU ASP LEU SER GLU PHE GLY LYS GLY VAL ALA SEQRES 42 B 595 PHE VAL ASN GLY GLN ASN LEU GLY ARG PHE TRP ASN VAL SEQRES 43 B 595 GLY PRO THR LEU SER LEU TYR ILE PRO HIS SER TYR LEU SEQRES 44 B 595 LYS GLU GLY ALA ASN ARG ILE ILE ILE PHE GLU THR GLU SEQRES 45 B 595 GLY GLN TYR LYS GLU GLU ILE HIS LEU THR ARG LYS PRO SEQRES 46 B 595 THR LEU LYS HIS ILE LYS GLY GLU ASN LEU HET GOL A 601 6 HET GOL A 602 6 HET GOL A 603 6 HET GOL A 604 6 HET GOL B 601 6 HET GOL B 602 6 HET GOL B 603 6 HET GOL B 604 6 HET GOL B 605 6 HET GOL B 606 6 HET GOL B 607 6 HET GOL B 608 6 HET GOL B 609 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 13(C3 H8 O3) FORMUL 16 HOH *871(H2 O) HELIX 1 1 TYR A 26 VAL A 29 5 4 HELIX 2 2 PRO A 30 GLU A 32 5 3 HELIX 3 3 ASP A 33 LEU A 44 1 12 HELIX 4 4 ALA A 54 GLU A 59 1 6 HELIX 5 5 GLU A 68 LEU A 71 5 4 HELIX 6 6 ASP A 72 LEU A 83 1 12 HELIX 7 7 TRP A 99 LEU A 104 5 6 HELIX 8 8 PRO A 105 LYS A 111 5 7 HELIX 9 9 ASP A 119 LEU A 134 1 16 HELIX 10 10 PRO A 135 GLY A 145 5 11 HELIX 11 11 GLU A 156 TYR A 160 5 5 HELIX 12 12 ASP A 163 CYS A 177 1 15 HELIX 13 13 TRP A 190 THR A 198 1 9 HELIX 14 14 LEU A 199 ASP A 203 5 5 HELIX 15 15 LYS A 213 HIS A 228 1 16 HELIX 16 16 ASP A 255 GLY A 270 1 16 HELIX 17 17 THR A 316 PHE A 330 1 15 HELIX 18 18 LEU A 357 SER A 365 1 9 HELIX 19 19 MET A 376 GLY A 380 5 5 HELIX 20 20 THR A 425 ILE A 427 5 3 HELIX 21 21 TYR A 455 PHE A 459 5 5 HELIX 22 22 ALA A 461 ARG A 465 5 5 HELIX 23 23 ASN A 491 ILE A 495 5 5 HELIX 24 24 PRO A 555 LEU A 559 5 5 HELIX 25 25 TYR B 26 VAL B 29 5 4 HELIX 26 26 PRO B 30 GLU B 32 5 3 HELIX 27 27 ASP B 33 LEU B 44 1 12 HELIX 28 28 ALA B 54 GLU B 59 1 6 HELIX 29 29 GLU B 68 LEU B 71 5 4 HELIX 30 30 ASP B 72 LEU B 83 1 12 HELIX 31 31 TRP B 99 LEU B 104 5 6 HELIX 32 32 PRO B 105 LYS B 111 5 7 HELIX 33 33 ASP B 119 VAL B 138 1 20 HELIX 34 34 PRO B 139 GLY B 145 5 7 HELIX 35 35 GLU B 156 TYR B 160 5 5 HELIX 36 36 ASP B 163 CYS B 177 1 15 HELIX 37 37 TRP B 190 THR B 198 1 9 HELIX 38 38 LEU B 199 ASP B 203 5 5 HELIX 39 39 LYS B 213 HIS B 228 1 16 HELIX 40 40 ASP B 255 GLY B 270 1 16 HELIX 41 41 THR B 316 PHE B 330 1 15 HELIX 42 42 THR B 360 SER B 365 1 6 HELIX 43 43 MET B 376 GLY B 380 5 5 HELIX 44 44 THR B 425 ILE B 427 5 3 HELIX 45 45 ALA B 461 ARG B 465 5 5 HELIX 46 46 ASN B 491 ILE B 495 5 5 HELIX 47 47 PRO B 555 LEU B 559 5 5 SHEET 1 A 3 PHE A 4 ILE A 6 0 SHEET 2 A 3 PHE A 10 LEU A 12 -1 O TYR A 11 N GLU A 5 SHEET 3 A 3 LYS A 15 SER A 16 -1 O LYS A 15 N LEU A 12 SHEET 1 B 9 LEU A 20 ILE A 24 0 SHEET 2 B 9 THR A 48 TYR A 52 1 O GLU A 50 N GLY A 22 SHEET 3 B 9 TYR A 86 ARG A 90 1 O ARG A 90 N THR A 51 SHEET 4 B 9 ILE A 148 GLN A 152 1 O LEU A 149 N ALA A 87 SHEET 5 B 9 LEU A 183 ASP A 187 1 O PHE A 184 N MET A 151 SHEET 6 B 9 PHE A 205 PHE A 210 1 O PHE A 205 N THR A 185 SHEET 7 B 9 MET A 235 TRP A 240 1 O MET A 235 N GLY A 208 SHEET 8 B 9 SER A 271 HIS A 278 1 O ASN A 273 N PHE A 239 SHEET 9 B 9 LEU A 20 ILE A 24 1 N ALA A 23 O LEU A 274 SHEET 1 C 2 CYS A 289 ARG A 292 0 SHEET 2 C 2 LEU A 295 PRO A 298 -1 O LEU A 297 N SER A 290 SHEET 1 D 8 GLN A 538 TRP A 544 0 SHEET 2 D 8 LYS A 530 VAL A 535 -1 N ALA A 533 O LEU A 540 SHEET 3 D 8 GLY A 562 GLU A 570 -1 O ILE A 567 N PHE A 534 SHEET 4 D 8 ALA A 507 VAL A 515 -1 N VAL A 515 O GLY A 562 SHEET 5 D 8 LEU A 346 SER A 356 -1 N VAL A 352 O ALA A 510 SHEET 6 D 8 GLU A 578 THR A 582 -1 O LEU A 581 N LEU A 346 SHEET 7 D 8 THR A 521 ASP A 524 -1 N TYR A 522 O THR A 582 SHEET 8 D 8 SER A 551 ILE A 554 -1 O ILE A 554 N THR A 521 SHEET 1 E 6 VAL A 368 SER A 370 0 SHEET 2 E 6 TRP A 482 LEU A 487 -1 O TRP A 482 N SER A 370 SHEET 3 E 6 TYR A 385 ASN A 393 -1 N LEU A 387 O TYR A 485 SHEET 4 E 6 LEU A 440 GLU A 448 -1 O SER A 441 N THR A 392 SHEET 5 E 6 ARG A 409 VAL A 414 -1 N TYR A 413 O ASP A 444 SHEET 6 E 6 GLN A 417 TYR A 423 -1 O VAL A 419 N LEU A 412 SHEET 1 F 4 ILE A 431 TYR A 433 0 SHEET 2 F 4 GLU A 399 ARG A 407 -1 N LEU A 401 O ILE A 431 SHEET 3 F 4 GLY A 467 LYS A 474 -1 O ARG A 469 N ASP A 405 SHEET 4 F 4 HIS A 477 PHE A 478 -1 O HIS A 477 N LYS A 474 SHEET 1 G 3 PHE B 4 ILE B 6 0 SHEET 2 G 3 PHE B 10 LEU B 12 -1 O TYR B 11 N GLU B 5 SHEET 3 G 3 LYS B 15 SER B 16 -1 O LYS B 15 N LEU B 12 SHEET 1 H 9 LEU B 20 ILE B 24 0 SHEET 2 H 9 THR B 48 TYR B 52 1 O GLU B 50 N GLY B 22 SHEET 3 H 9 TYR B 86 ARG B 90 1 O ARG B 90 N THR B 51 SHEET 4 H 9 ILE B 148 GLN B 152 1 O LEU B 149 N ALA B 87 SHEET 5 H 9 LEU B 183 ASP B 187 1 O PHE B 184 N MET B 151 SHEET 6 H 9 PHE B 205 PHE B 210 1 O ASN B 209 N ASP B 187 SHEET 7 H 9 MET B 235 TRP B 240 1 O MET B 235 N GLY B 208 SHEET 8 H 9 SER B 271 HIS B 278 1 O ASN B 273 N PHE B 239 SHEET 9 H 9 LEU B 20 ILE B 24 1 N ALA B 23 O LEU B 274 SHEET 1 I 2 CYS B 289 ARG B 292 0 SHEET 2 I 2 LEU B 295 PRO B 298 -1 O LEU B 297 N SER B 290 SHEET 1 J 8 GLN B 538 TRP B 544 0 SHEET 2 J 8 LYS B 530 VAL B 535 -1 N ALA B 533 O LEU B 540 SHEET 3 J 8 GLY B 562 GLU B 570 -1 O PHE B 569 N VAL B 532 SHEET 4 J 8 ALA B 507 VAL B 515 -1 N VAL B 515 O GLY B 562 SHEET 5 J 8 LEU B 346 SER B 356 -1 N VAL B 352 O ALA B 510 SHEET 6 J 8 GLU B 578 THR B 582 -1 O LEU B 581 N LEU B 346 SHEET 7 J 8 THR B 521 ASP B 524 -1 N TYR B 522 O THR B 582 SHEET 8 J 8 SER B 551 ILE B 554 -1 O ILE B 554 N THR B 521 SHEET 1 K 6 VAL B 368 SER B 370 0 SHEET 2 K 6 TRP B 482 LEU B 487 -1 O HIS B 484 N VAL B 368 SHEET 3 K 6 TYR B 385 THR B 392 -1 N TYR B 385 O LEU B 487 SHEET 4 K 6 SER B 441 GLU B 448 -1 O SER B 441 N THR B 392 SHEET 5 K 6 ARG B 409 VAL B 414 -1 N TYR B 413 O ASP B 444 SHEET 6 K 6 GLN B 417 TYR B 423 -1 O GLN B 422 N ALA B 410 SHEET 1 L 4 ILE B 431 TYR B 433 0 SHEET 2 L 4 GLU B 399 ARG B 407 -1 N LEU B 401 O ILE B 431 SHEET 3 L 4 GLY B 467 LYS B 474 -1 O ARG B 469 N ASP B 405 SHEET 4 L 4 HIS B 477 PHE B 478 -1 O HIS B 477 N LYS B 474 CISPEP 1 TYR A 275 MET A 276 0 -1.36 CISPEP 2 ARG A 407 ASP A 408 0 3.03 CISPEP 3 GLY A 547 PRO A 548 0 9.06 CISPEP 4 TYR B 275 MET B 276 0 0.89 CISPEP 5 ARG B 407 ASP B 408 0 3.57 CISPEP 6 GLY B 547 PRO B 548 0 9.27 SITE 1 AC1 5 LYS A 341 GLU A 342 LYS A 519 ASP A 520 SITE 2 AC1 5 HIS A 556 SITE 1 AC2 5 GLN A 81 GLY A 84 LEU A 85 TYR A 86 SITE 2 AC2 5 ASN A 147 SITE 1 AC3 6 ASP A 304 GLU A 311 PRO A 585 HOH A 857 SITE 2 AC3 6 HOH A 878 HOH A 988 SITE 1 AC4 7 ARG A 191 GLN A 220 GLU A 223 PHE A 224 SITE 2 AC4 7 GLU A 227 LYS A 438 HOH A1012 SITE 1 AC5 8 ASP B 490 PRO B 492 PHE B 534 GLY B 537 SITE 2 AC5 8 GLN B 538 ASN B 539 GOL B 604 HOH B 861 SITE 1 AC6 6 GLU B 32 ASP B 70 GLN B 538 SER B 557 SITE 2 AC6 6 TYR B 558 HOH B1031 SITE 1 AC7 5 LYS B 213 PRO B 215 GLU B 265 HOH B 735 SITE 2 AC7 5 HOH B 919 SITE 1 AC8 6 GLY B 284 PHE B 285 PRO B 488 ASN B 539 SITE 2 AC8 6 GOL B 601 HOH B 927 SITE 1 AC9 7 ARG B 191 LEU B 194 GLN B 220 GLU B 223 SITE 2 AC9 7 PHE B 224 GLU B 227 LYS B 438 SITE 1 BC1 2 VAL B 368 GLU B 369 SITE 1 BC2 4 ARG B 171 GLU B 175 HOH B 863 HOH B 944 SITE 1 BC3 6 LYS B 341 GLU B 342 LYS B 519 ASP B 520 SITE 2 BC3 6 HIS B 556 HOH B 995 SITE 1 BC4 1 HOH B 954 CRYST1 79.971 79.300 99.387 90.00 106.94 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012505 0.000000 0.003809 0.00000 SCALE2 0.000000 0.012610 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010518 0.00000