HEADER TRANSFERASE 20-MAR-12 4E8E TITLE STRUCTURAL CHARACTERIZATION OF BOMBYX MORI GLUTATHIONE TRANSFERASE TITLE 2 BMGSTD1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 2.5.1.18; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOMBYX MORI; SOURCE 3 ORGANISM_COMMON: SILK MOTH; SOURCE 4 ORGANISM_TAXID: 7091; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRX-LIKE FOLD, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR X.TAN,X.X.MA,X.M.HU,Q.M.CHEN,P.ZHAO,Q.Y.XIA,C.Z.ZHOU REVDAT 2 08-NOV-23 4E8E 1 SEQADV REVDAT 1 24-APR-13 4E8E 0 JRNL AUTH X.TAN,X.X.MA,X.M.HU,Q.M.CHEN,P.ZHAO,Q.Y.XIA,C.Z.ZHOU JRNL TITL STRUCTURAL CHARACTERIZATION OF BOMBYX MORI GLUTATHIONE JRNL TITL 2 TRANSFERASE BMGSTD1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 26989 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1445 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.51 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1772 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.21 REMARK 3 BIN R VALUE (WORKING SET) : 0.2510 REMARK 3 BIN FREE R VALUE SET COUNT : 110 REMARK 3 BIN FREE R VALUE : 0.3440 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7028 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 216 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.08000 REMARK 3 B22 (A**2) : 5.74000 REMARK 3 B33 (A**2) : -2.51000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.34000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.366 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.287 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 28.796 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.911 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.872 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7216 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9816 ; 0.853 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 860 ; 4.228 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 348 ;37.984 ;24.138 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1212 ;12.665 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 40 ;11.711 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1072 ; 0.054 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5536 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4328 ; 0.151 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7040 ; 0.278 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2888 ; 0.240 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2776 ; 0.422 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 215 REMARK 3 ORIGIN FOR THE GROUP (A): 1.7313 2.7377 2.3575 REMARK 3 T TENSOR REMARK 3 T11: 0.0116 T22: 0.0176 REMARK 3 T33: 0.0211 T12: 0.0029 REMARK 3 T13: 0.0037 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 1.7150 L22: 2.5151 REMARK 3 L33: 1.2292 L12: 0.2090 REMARK 3 L13: 0.0329 L23: -0.1617 REMARK 3 S TENSOR REMARK 3 S11: -0.0238 S12: 0.1024 S13: -0.0485 REMARK 3 S21: -0.1416 S22: 0.0347 S23: 0.0192 REMARK 3 S31: -0.0433 S32: -0.0664 S33: -0.0109 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 215 REMARK 3 ORIGIN FOR THE GROUP (A): 10.1685 -1.6884 45.6181 REMARK 3 T TENSOR REMARK 3 T11: 0.0024 T22: 0.1086 REMARK 3 T33: 0.0081 T12: -0.0015 REMARK 3 T13: -0.0014 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 1.4190 L22: 1.1881 REMARK 3 L33: 3.1828 L12: -0.2709 REMARK 3 L13: 0.0026 L23: 0.4936 REMARK 3 S TENSOR REMARK 3 S11: -0.0488 S12: -0.1237 S13: 0.0024 REMARK 3 S21: 0.0274 S22: 0.0174 S23: -0.0539 REMARK 3 S31: 0.0227 S32: 0.0373 S33: 0.0314 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 0 C 215 REMARK 3 ORIGIN FOR THE GROUP (A): 25.5811 -0.3306 4.8167 REMARK 3 T TENSOR REMARK 3 T11: 0.0053 T22: 0.0759 REMARK 3 T33: 0.0423 T12: 0.0159 REMARK 3 T13: 0.0045 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 1.4208 L22: 1.2986 REMARK 3 L33: 2.1265 L12: 0.0844 REMARK 3 L13: -0.2112 L23: -0.3598 REMARK 3 S TENSOR REMARK 3 S11: 0.0008 S12: -0.0355 S13: -0.1137 REMARK 3 S21: -0.0376 S22: -0.0431 S23: -0.0382 REMARK 3 S31: 0.0911 S32: 0.2457 S33: 0.0423 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 0 D 215 REMARK 3 ORIGIN FOR THE GROUP (A): -13.6757 -3.6630 42.8667 REMARK 3 T TENSOR REMARK 3 T11: 0.0222 T22: 0.3769 REMARK 3 T33: 0.0261 T12: -0.0395 REMARK 3 T13: 0.0069 T23: 0.0465 REMARK 3 L TENSOR REMARK 3 L11: 3.1476 L22: 1.1994 REMARK 3 L33: 4.5806 L12: 0.2084 REMARK 3 L13: 0.2954 L23: 0.8565 REMARK 3 S TENSOR REMARK 3 S11: 0.0026 S12: -0.4966 S13: -0.2616 REMARK 3 S21: -0.1049 S22: -0.0516 S23: -0.0462 REMARK 3 S31: 0.1490 S32: -0.6227 S33: 0.0489 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 301 A 354 REMARK 3 RESIDUE RANGE : B 301 B 348 REMARK 3 RESIDUE RANGE : C 301 C 359 REMARK 3 RESIDUE RANGE : D 301 D 355 REMARK 3 ORIGIN FOR THE GROUP (A): 6.0225 -0.5149 23.8792 REMARK 3 T TENSOR REMARK 3 T11: 0.0022 T22: 0.0339 REMARK 3 T33: 0.1001 T12: -0.0025 REMARK 3 T13: -0.0029 T23: 0.0362 REMARK 3 L TENSOR REMARK 3 L11: 0.1892 L22: 0.0273 REMARK 3 L33: 0.4584 L12: -0.0149 REMARK 3 L13: -0.1136 L23: 0.1084 REMARK 3 S TENSOR REMARK 3 S11: 0.0016 S12: -0.0699 S13: -0.0805 REMARK 3 S21: 0.0055 S22: -0.0081 S23: -0.0036 REMARK 3 S31: 0.0240 S32: -0.0066 S33: 0.0065 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4E8E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-MAR-12. REMARK 100 THE DEPOSITION ID IS D_1000071298. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28461 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : 0.07500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.16600 REMARK 200 R SYM FOR SHELL (I) : 0.16600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 7.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1R5A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8% PEG 4000, 0.1M SODIUM ACETATE REMARK 280 TRIHYDRATE (PH 4.6) , VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 44.37800 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 216 REMARK 465 LYS A 217 REMARK 465 GLU A 218 REMARK 465 LYS B 216 REMARK 465 LYS B 217 REMARK 465 GLU B 218 REMARK 465 LYS C 216 REMARK 465 LYS C 217 REMARK 465 GLU C 218 REMARK 465 LYS D 216 REMARK 465 LYS D 217 REMARK 465 GLU D 218 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 69 100.67 71.41 REMARK 500 TYR A 88 80.83 -154.52 REMARK 500 THR A 108 -65.38 -124.43 REMARK 500 ILE A 203 -64.62 -101.09 REMARK 500 GLU B 69 104.96 72.88 REMARK 500 THR B 108 -59.00 -122.38 REMARK 500 GLU C 69 107.01 71.50 REMARK 500 THR C 108 -69.97 -124.94 REMARK 500 ILE C 203 -61.15 -94.48 REMARK 500 GLU D 69 107.23 72.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4E8H RELATED DB: PDB DBREF 4E8E A 1 218 UNP O61996 O61996_BOMMO 1 218 DBREF 4E8E B 1 218 UNP O61996 O61996_BOMMO 1 218 DBREF 4E8E C 1 218 UNP O61996 O61996_BOMMO 1 218 DBREF 4E8E D 1 218 UNP O61996 O61996_BOMMO 1 218 SEQADV 4E8E HIS A 0 UNP O61996 EXPRESSION TAG SEQADV 4E8E HIS B 0 UNP O61996 EXPRESSION TAG SEQADV 4E8E HIS C 0 UNP O61996 EXPRESSION TAG SEQADV 4E8E HIS D 0 UNP O61996 EXPRESSION TAG SEQRES 1 A 219 HIS MET PRO VAL GLN PRO ILE LYS LEU TYR TYR LEU PRO SEQRES 2 A 219 PRO SER PRO PRO CYS ARG ALA VAL MET MET THR ALA ARG SEQRES 3 A 219 VAL LEU GLU LEU ASP LEU HIS LEU ILE THR THR ASN ILE SEQRES 4 A 219 MET ASN GLY GLU HIS MET THR PRO GLU TYR LEU LYS MET SEQRES 5 A 219 ASN PRO GLN HIS THR ILE PRO THR MET ASP ASP ASN GLY SEQRES 6 A 219 PHE ILE LEU TRP GLU SER ARG ALA ILE GLN THR TYR LEU SEQRES 7 A 219 VAL ASN ALA TYR GLY LYS ASP ASP SER LEU TYR PRO LYS SEQRES 8 A 219 ASN PRO ARG GLN ARG ALA ILE ILE ASP GLN ARG LEU ASN SEQRES 9 A 219 PHE ASP LEU GLY THR LEU TYR LEU ARG TYR LEU ASN LEU SEQRES 10 A 219 TYR THR PRO ILE LEU PHE ARG GLY GLU ALA TYR ASP GLN SEQRES 11 A 219 GLU LYS ALA ASP LYS PHE ASP GLU ALA LEU GLY TRP LEU SEQRES 12 A 219 ASN THR PHE LEU ASP GLY ARG PRO PHE VAL ALA GLY GLU SEQRES 13 A 219 ASN MET THR VAL ALA ASP ILE THR ILE VAL VAL THR ILE SEQRES 14 A 219 THR ASN ILE ASP ALA PHE GLY TYR ASP PHE SER SER HIS SEQRES 15 A 219 GLU ASN ILE ALA LYS TRP PHE GLU ARG THR LYS LYS MET SEQRES 16 A 219 LEU GLU PRO TYR GLY TYR ASP GLU ILE ASP VAL THR GLY SEQRES 17 A 219 ALA LYS MET LEU ALA SER PHE LEU LYS LYS GLU SEQRES 1 B 219 HIS MET PRO VAL GLN PRO ILE LYS LEU TYR TYR LEU PRO SEQRES 2 B 219 PRO SER PRO PRO CYS ARG ALA VAL MET MET THR ALA ARG SEQRES 3 B 219 VAL LEU GLU LEU ASP LEU HIS LEU ILE THR THR ASN ILE SEQRES 4 B 219 MET ASN GLY GLU HIS MET THR PRO GLU TYR LEU LYS MET SEQRES 5 B 219 ASN PRO GLN HIS THR ILE PRO THR MET ASP ASP ASN GLY SEQRES 6 B 219 PHE ILE LEU TRP GLU SER ARG ALA ILE GLN THR TYR LEU SEQRES 7 B 219 VAL ASN ALA TYR GLY LYS ASP ASP SER LEU TYR PRO LYS SEQRES 8 B 219 ASN PRO ARG GLN ARG ALA ILE ILE ASP GLN ARG LEU ASN SEQRES 9 B 219 PHE ASP LEU GLY THR LEU TYR LEU ARG TYR LEU ASN LEU SEQRES 10 B 219 TYR THR PRO ILE LEU PHE ARG GLY GLU ALA TYR ASP GLN SEQRES 11 B 219 GLU LYS ALA ASP LYS PHE ASP GLU ALA LEU GLY TRP LEU SEQRES 12 B 219 ASN THR PHE LEU ASP GLY ARG PRO PHE VAL ALA GLY GLU SEQRES 13 B 219 ASN MET THR VAL ALA ASP ILE THR ILE VAL VAL THR ILE SEQRES 14 B 219 THR ASN ILE ASP ALA PHE GLY TYR ASP PHE SER SER HIS SEQRES 15 B 219 GLU ASN ILE ALA LYS TRP PHE GLU ARG THR LYS LYS MET SEQRES 16 B 219 LEU GLU PRO TYR GLY TYR ASP GLU ILE ASP VAL THR GLY SEQRES 17 B 219 ALA LYS MET LEU ALA SER PHE LEU LYS LYS GLU SEQRES 1 C 219 HIS MET PRO VAL GLN PRO ILE LYS LEU TYR TYR LEU PRO SEQRES 2 C 219 PRO SER PRO PRO CYS ARG ALA VAL MET MET THR ALA ARG SEQRES 3 C 219 VAL LEU GLU LEU ASP LEU HIS LEU ILE THR THR ASN ILE SEQRES 4 C 219 MET ASN GLY GLU HIS MET THR PRO GLU TYR LEU LYS MET SEQRES 5 C 219 ASN PRO GLN HIS THR ILE PRO THR MET ASP ASP ASN GLY SEQRES 6 C 219 PHE ILE LEU TRP GLU SER ARG ALA ILE GLN THR TYR LEU SEQRES 7 C 219 VAL ASN ALA TYR GLY LYS ASP ASP SER LEU TYR PRO LYS SEQRES 8 C 219 ASN PRO ARG GLN ARG ALA ILE ILE ASP GLN ARG LEU ASN SEQRES 9 C 219 PHE ASP LEU GLY THR LEU TYR LEU ARG TYR LEU ASN LEU SEQRES 10 C 219 TYR THR PRO ILE LEU PHE ARG GLY GLU ALA TYR ASP GLN SEQRES 11 C 219 GLU LYS ALA ASP LYS PHE ASP GLU ALA LEU GLY TRP LEU SEQRES 12 C 219 ASN THR PHE LEU ASP GLY ARG PRO PHE VAL ALA GLY GLU SEQRES 13 C 219 ASN MET THR VAL ALA ASP ILE THR ILE VAL VAL THR ILE SEQRES 14 C 219 THR ASN ILE ASP ALA PHE GLY TYR ASP PHE SER SER HIS SEQRES 15 C 219 GLU ASN ILE ALA LYS TRP PHE GLU ARG THR LYS LYS MET SEQRES 16 C 219 LEU GLU PRO TYR GLY TYR ASP GLU ILE ASP VAL THR GLY SEQRES 17 C 219 ALA LYS MET LEU ALA SER PHE LEU LYS LYS GLU SEQRES 1 D 219 HIS MET PRO VAL GLN PRO ILE LYS LEU TYR TYR LEU PRO SEQRES 2 D 219 PRO SER PRO PRO CYS ARG ALA VAL MET MET THR ALA ARG SEQRES 3 D 219 VAL LEU GLU LEU ASP LEU HIS LEU ILE THR THR ASN ILE SEQRES 4 D 219 MET ASN GLY GLU HIS MET THR PRO GLU TYR LEU LYS MET SEQRES 5 D 219 ASN PRO GLN HIS THR ILE PRO THR MET ASP ASP ASN GLY SEQRES 6 D 219 PHE ILE LEU TRP GLU SER ARG ALA ILE GLN THR TYR LEU SEQRES 7 D 219 VAL ASN ALA TYR GLY LYS ASP ASP SER LEU TYR PRO LYS SEQRES 8 D 219 ASN PRO ARG GLN ARG ALA ILE ILE ASP GLN ARG LEU ASN SEQRES 9 D 219 PHE ASP LEU GLY THR LEU TYR LEU ARG TYR LEU ASN LEU SEQRES 10 D 219 TYR THR PRO ILE LEU PHE ARG GLY GLU ALA TYR ASP GLN SEQRES 11 D 219 GLU LYS ALA ASP LYS PHE ASP GLU ALA LEU GLY TRP LEU SEQRES 12 D 219 ASN THR PHE LEU ASP GLY ARG PRO PHE VAL ALA GLY GLU SEQRES 13 D 219 ASN MET THR VAL ALA ASP ILE THR ILE VAL VAL THR ILE SEQRES 14 D 219 THR ASN ILE ASP ALA PHE GLY TYR ASP PHE SER SER HIS SEQRES 15 D 219 GLU ASN ILE ALA LYS TRP PHE GLU ARG THR LYS LYS MET SEQRES 16 D 219 LEU GLU PRO TYR GLY TYR ASP GLU ILE ASP VAL THR GLY SEQRES 17 D 219 ALA LYS MET LEU ALA SER PHE LEU LYS LYS GLU FORMUL 5 HOH *216(H2 O) HELIX 1 1 SER A 14 LEU A 27 1 14 HELIX 2 2 ASN A 37 GLY A 41 5 5 HELIX 3 3 THR A 45 ASN A 52 1 8 HELIX 4 4 GLU A 69 GLY A 82 1 14 HELIX 5 5 ASN A 91 THR A 108 1 18 HELIX 6 6 THR A 108 PHE A 122 1 15 HELIX 7 7 ASP A 128 LEU A 146 1 19 HELIX 8 8 THR A 158 PHE A 174 1 17 HELIX 9 9 HIS A 181 GLU A 196 1 16 HELIX 10 10 GLY A 199 SER A 213 1 15 HELIX 11 11 SER B 14 LEU B 27 1 14 HELIX 12 12 THR B 45 ASN B 52 1 8 HELIX 13 13 GLU B 69 GLY B 82 1 14 HELIX 14 14 ASN B 91 THR B 108 1 18 HELIX 15 15 THR B 108 PHE B 122 1 15 HELIX 16 16 ASP B 128 LEU B 146 1 19 HELIX 17 17 THR B 158 PHE B 174 1 17 HELIX 18 18 HIS B 181 GLU B 196 1 16 HELIX 19 19 GLY B 199 SER B 213 1 15 HELIX 20 20 SER C 14 LEU C 27 1 14 HELIX 21 21 THR C 45 ASN C 52 1 8 HELIX 22 22 GLU C 69 GLY C 82 1 14 HELIX 23 23 ASN C 91 THR C 108 1 18 HELIX 24 24 THR C 108 GLY C 124 1 17 HELIX 25 25 ASP C 128 LEU C 146 1 19 HELIX 26 26 THR C 158 GLY C 175 1 18 HELIX 27 27 HIS C 181 GLU C 196 1 16 HELIX 28 28 GLY C 199 SER C 213 1 15 HELIX 29 29 SER D 14 LEU D 27 1 14 HELIX 30 30 THR D 45 ASN D 52 1 8 HELIX 31 31 GLU D 69 GLY D 82 1 14 HELIX 32 32 ASN D 91 THR D 108 1 18 HELIX 33 33 THR D 108 PHE D 122 1 15 HELIX 34 34 GLN D 129 LEU D 146 1 18 HELIX 35 35 THR D 158 GLY D 175 1 18 HELIX 36 36 HIS D 181 LEU D 195 1 15 HELIX 37 37 GLU D 196 TYR D 198 5 3 HELIX 38 38 GLY D 199 SER D 213 1 15 SHEET 1 A 4 LEU A 31 THR A 35 0 SHEET 2 A 4 ILE A 6 TYR A 10 1 N TYR A 10 O ILE A 34 SHEET 3 A 4 THR A 59 ASP A 62 -1 O ASP A 61 N LYS A 7 SHEET 4 A 4 PHE A 65 TRP A 68 -1 O LEU A 67 N MET A 60 SHEET 1 B 4 HIS B 32 THR B 35 0 SHEET 2 B 4 LYS B 7 TYR B 10 1 N LEU B 8 O HIS B 32 SHEET 3 B 4 THR B 59 ASP B 62 -1 O ASP B 61 N LYS B 7 SHEET 4 B 4 PHE B 65 TRP B 68 -1 O LEU B 67 N MET B 60 SHEET 1 C 4 LEU C 31 THR C 35 0 SHEET 2 C 4 ILE C 6 TYR C 10 1 N ILE C 6 O HIS C 32 SHEET 3 C 4 THR C 59 ASP C 62 -1 O ASP C 61 N LYS C 7 SHEET 4 C 4 PHE C 65 TRP C 68 -1 O LEU C 67 N MET C 60 SHEET 1 D 4 LEU D 31 THR D 35 0 SHEET 2 D 4 ILE D 6 TYR D 10 1 N TYR D 10 O ILE D 34 SHEET 3 D 4 THR D 59 ASP D 62 -1 O ASP D 61 N LYS D 7 SHEET 4 D 4 PHE D 65 TRP D 68 -1 O LEU D 67 N MET D 60 CISPEP 1 ILE A 57 PRO A 58 0 2.34 CISPEP 2 ILE B 57 PRO B 58 0 0.79 CISPEP 3 ILE C 57 PRO C 58 0 1.83 CISPEP 4 ILE D 57 PRO D 58 0 1.87 CRYST1 56.783 88.756 86.488 90.00 102.68 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017611 0.000000 0.003962 0.00000 SCALE2 0.000000 0.011267 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011851 0.00000