HEADER TRANSCRIPTION 27-MAR-12 4EDU TITLE THE MBT REPEATS OF HUMAN SCML2 IN A COMPLEX WITH HISTONE H2A PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SEX COMB ON MIDLEG-LIKE PROTEIN 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 31-46; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: HISTONE H2A.J PEPTIDE; COMPND 9 CHAIN: T; COMPND 10 SYNONYM: H2A/J; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SCML2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: C+; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28MHL; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 OTHER_DETAILS: SYNTHESIZED KEYWDS MBT FOLD, ROYAL FAMILY, HISTONE PTM BINDING, METHYLATION, KEYWDS 2 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR N.NADY,M.F.AMAYA,W.TEMPEL,M.RAVICHANDRAN,C.H.ARROWSMITH REVDAT 4 13-SEP-23 4EDU 1 SEQADV LINK REVDAT 3 15-NOV-17 4EDU 1 REMARK REVDAT 2 19-DEC-12 4EDU 1 JRNL REVDAT 1 19-SEP-12 4EDU 0 JRNL AUTH N.NADY,L.KRICHEVSKY,N.ZHONG,S.DUAN,W.TEMPEL,M.F.AMAYA, JRNL AUTH 2 M.RAVICHANDRAN,C.H.ARROWSMITH JRNL TITL HISTONE RECOGNITION BY HUMAN MALIGNANT BRAIN TUMOR DOMAINS. JRNL REF J.MOL.BIOL. V. 423 702 2012 JRNL REFN ISSN 0022-2836 JRNL PMID 22954662 JRNL DOI 10.1016/J.JMB.2012.08.022 REMARK 2 REMARK 2 RESOLUTION. 2.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 13947 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.962 REMARK 3 FREE R VALUE TEST SET COUNT : 692 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.58 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.65 REMARK 3 REFLECTION IN BIN (WORKING SET) : 820 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3770 REMARK 3 BIN FREE R VALUE SET COUNT : 39 REMARK 3 BIN FREE R VALUE : 0.3910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1703 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 47 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.09900 REMARK 3 B22 (A**2) : 3.09900 REMARK 3 B33 (A**2) : -6.19800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.286 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.235 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.195 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.099 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1769 ; 0.015 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1229 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2403 ; 1.463 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2994 ; 0.856 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 219 ; 6.606 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 78 ;28.749 ;23.974 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 283 ;15.628 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;19.504 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 255 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1968 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 359 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 32 A 242 REMARK 3 ORIGIN FOR THE GROUP (A): 18.8501 6.2552 57.4101 REMARK 3 T TENSOR REMARK 3 T11: 0.0929 T22: 0.0364 REMARK 3 T33: 0.0258 T12: -0.0517 REMARK 3 T13: -0.0270 T23: 0.0119 REMARK 3 L TENSOR REMARK 3 L11: 0.3124 L22: 1.8032 REMARK 3 L33: 5.4488 L12: 0.0079 REMARK 3 L13: 0.2348 L23: 2.4481 REMARK 3 S TENSOR REMARK 3 S11: 0.0249 S12: -0.0284 S13: 0.0327 REMARK 3 S21: -0.0077 S22: -0.0411 S23: -0.0205 REMARK 3 S31: -0.0844 S32: 0.0787 S33: 0.0161 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 4EDU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-MAR-12. REMARK 100 THE DEPOSITION ID IS D_1000071492. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.97937 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC Q315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15321 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.580 REMARK 200 RESOLUTION RANGE LOW (A) : 43.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.710 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.5034 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.92 REMARK 200 R MERGE FOR SHELL (I) : 0.98000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1OI1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M NH4PO4, 0.1M TRIS/HCL, 1:5 MOLAR REMARK 280 RATIO OF PROTEIN:PEPTIDE, PROTEIN CONCENTRATION 35 MG/ML, PH 9.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.80450 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.97450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.97450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 127.20675 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.97450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.97450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 42.40225 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.97450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.97450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 127.20675 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.97450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.97450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 42.40225 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 84.80450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 169.60900 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 29 REMARK 465 ARG A 30 REMARK 465 ASP A 31 REMARK 465 SER A 243 REMARK 465 ASN T 38 REMARK 465 TYR T 39 REMARK 465 ALA T 40 REMARK 465 GLU T 41 REMARK 465 ARG T 42 REMARK 465 VAL T 43 REMARK 465 GLY T 44 REMARK 465 ALA T 45 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 36 CD OE1 OE2 REMARK 470 GLU A 37 CG CD OE1 OE2 REMARK 470 LYS A 40 CG CD CE NZ REMARK 470 LEU A 127 CG CD1 CD2 REMARK 470 LYS A 162 CE NZ REMARK 470 ARG A 231 NE CZ NH1 NH2 REMARK 470 VAL T 30 CG1 CG2 REMARK 470 ARG T 35 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 185 72.10 -158.16 REMARK 500 REMARK 500 REMARK: NULL DBREF 4EDU A 29 243 UNP Q9UQR0 SCML2_HUMAN 29 243 DBREF 4EDU T 30 45 UNP Q9BTM1 H2AJ_HUMAN 31 46 SEQADV 4EDU GLU A 147 UNP Q9UQR0 LYS 147 ENGINEERED MUTATION SEQRES 1 A 215 GLN ARG ASP ASP PHE HIS TRP GLU GLU TYR LEU LYS GLU SEQRES 2 A 215 THR GLY SER ILE SER ALA PRO SER GLU CYS PHE ARG GLN SEQRES 3 A 215 SER GLN ILE PRO PRO VAL ASN ASP PHE LYS VAL GLY MET SEQRES 4 A 215 LYS LEU GLU ALA ARG ASP PRO ARG ASN ALA THR SER VAL SEQRES 5 A 215 CYS ILE ALA THR VAL ILE GLY ILE THR GLY ALA ARG LEU SEQRES 6 A 215 ARG LEU ARG LEU ASP GLY SER ASP ASN ARG ASN ASP PHE SEQRES 7 A 215 TRP ARG LEU VAL ASP SER PRO ASP ILE GLN PRO VAL GLY SEQRES 8 A 215 THR CYS GLU LYS GLU GLY ASP LEU LEU GLN PRO PRO LEU SEQRES 9 A 215 GLY TYR GLN MET ASN THR SER SER TRP PRO MET PHE LEU SEQRES 10 A 215 LEU GLU THR LEU ASN GLY SER GLU MET ALA SER ALA THR SEQRES 11 A 215 LEU PHE LYS LYS GLU PRO PRO LYS PRO PRO LEU ASN ASN SEQRES 12 A 215 PHE LYS VAL GLY MET LYS LEU GLU ALA ILE ASP LYS LYS SEQRES 13 A 215 ASN PRO TYR LEU ILE CYS PRO ALA THR ILE GLY ASP VAL SEQRES 14 A 215 LYS GLY ASP GLU VAL HIS ILE THR PHE ASP GLY TRP SER SEQRES 15 A 215 GLY ALA PHE ASP TYR TRP CYS LYS TYR ASP SER ARG ASP SEQRES 16 A 215 ILE PHE PRO ALA GLY TRP CYS ARG LEU THR GLY ASP VAL SEQRES 17 A 215 LEU GLN PRO PRO GLY THR SER SEQRES 1 T 16 VAL HIS ARG LEU LEU ARG MLZ GLY ASN TYR ALA GLU ARG SEQRES 2 T 16 VAL GLY ALA MODRES 4EDU MLZ T 36 LYS N-METHYL-LYSINE HET MLZ T 36 10 HETNAM MLZ N-METHYL-LYSINE FORMUL 2 MLZ C7 H16 N2 O2 FORMUL 3 HOH *47(H2 O) HELIX 1 1 HIS A 34 GLY A 43 1 10 HELIX 2 2 PRO A 48 PHE A 52 5 5 HELIX 3 3 GLY A 119 GLY A 125 1 7 HELIX 4 4 ASN A 137 SER A 139 5 3 HELIX 5 5 SER A 140 ASN A 150 1 11 HELIX 6 6 SER A 156 PHE A 160 5 5 HELIX 7 7 SER A 210 ASP A 214 5 5 HELIX 8 8 GLY A 228 GLY A 234 1 7 SHEET 1 A 5 PHE A 106 LEU A 109 0 SHEET 2 A 5 ARG A 92 LEU A 97 -1 N LEU A 95 O PHE A 106 SHEET 3 A 5 ASN A 76 THR A 89 -1 N ILE A 86 O ARG A 94 SHEET 4 A 5 LYS A 68 ASP A 73 -1 N ASP A 73 O SER A 79 SHEET 5 A 5 ILE A 115 PRO A 117 -1 O GLN A 116 N GLU A 70 SHEET 1 B 5 TYR A 215 LYS A 218 0 SHEET 2 B 5 GLU A 201 PHE A 206 -1 N ILE A 204 O TYR A 215 SHEET 3 B 5 ILE A 189 LYS A 198 -1 N GLY A 195 O HIS A 203 SHEET 4 B 5 LYS A 177 ILE A 181 -1 N LEU A 178 O ALA A 192 SHEET 5 B 5 ILE A 224 PHE A 225 -1 O PHE A 225 N GLU A 179 LINK C ARG T 35 N MLZ T 36 1555 1555 1.34 LINK C MLZ T 36 N GLY T 37 1555 1555 1.34 CRYST1 69.949 69.949 169.609 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014296 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014296 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005896 0.00000