HEADER OXIDOREDUCTASE 02-APR-12 4EH1 TITLE CRYSTAL STRUCTURE OF THE FLAVOHEM-LIKE-FAD/NAD BINDING DOMAIN OF TITLE 2 NITRIC OXIDE DIOXYGENASE FROM VIBRIO CHOLERAE O1 BIOVAR EL TOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLAVOHEMOPROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: FAD_NAD(P)H BINDING DOMAIN, UNP RESIDUES 152-394; COMPND 5 SYNONYM: FLAVOHEMOGLOBIN, HEMOGLOBIN-LIKE PROTEIN, NITRIC OXIDE COMPND 6 DIOXYGENASE, NO OXYGENASE, NOD; COMPND 7 EC: 1.14.12.17; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE O1 BIOVAR EL TOR; SOURCE 3 ORGANISM_TAXID: 243277; SOURCE 4 STRAIN: N16961; SOURCE 5 GENE: HMP, VC_A0183; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, NIAID, NATIONAL INSTITUTE OF ALLERGY AND KEYWDS 2 INFECTIOUS DISEASES, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 3 DISEASES, CSGID, ALPHA-BETA-ALPHA SANDWICH, BETA STRUCTURE, KEYWDS 4 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,M.GU,J.HASSEMAN,W.F.ANDERSON,A.JOACHIMIAK,CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 2 28-FEB-24 4EH1 1 REMARK REVDAT 1 25-APR-12 4EH1 0 JRNL AUTH Y.KIM,M.GU,J.HASSEMAN,W.F.ANDERSON,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF THE FLAVOHEM-LIKE-FAD/NAD BINDING JRNL TITL 2 DOMAIN OF NITRIC OXIDE DIOXYGENASE FROM VIBRIO CHOLERAE O1 JRNL TITL 3 BIOVAR EL TOR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_921) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 29265 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1483 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.4194 - 4.8906 0.99 2670 128 0.1889 0.2271 REMARK 3 2 4.8906 - 3.8828 1.00 2554 148 0.1355 0.1603 REMARK 3 3 3.8828 - 3.3923 1.00 2547 133 0.1372 0.2347 REMARK 3 4 3.3923 - 3.0822 1.00 2526 134 0.1503 0.2016 REMARK 3 5 3.0822 - 2.8614 1.00 2516 139 0.1609 0.2071 REMARK 3 6 2.8614 - 2.6927 1.00 2499 131 0.1776 0.2487 REMARK 3 7 2.6927 - 2.5579 1.00 2492 127 0.1881 0.2767 REMARK 3 8 2.5579 - 2.4466 1.00 2489 145 0.1829 0.2562 REMARK 3 9 2.4466 - 2.3524 1.00 2516 126 0.1908 0.2450 REMARK 3 10 2.3524 - 2.2712 1.00 2469 148 0.2008 0.2408 REMARK 3 11 2.2712 - 2.2002 1.00 2504 124 0.2184 0.3062 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.98 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 44.82 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.010 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.32600 REMARK 3 B22 (A**2) : 3.32600 REMARK 3 B33 (A**2) : -6.65210 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 4169 REMARK 3 ANGLE : 1.465 5693 REMARK 3 CHIRALITY : 0.090 604 REMARK 3 PLANARITY : 0.012 734 REMARK 3 DIHEDRAL : 17.807 1518 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 2:14) REMARK 3 ORIGIN FOR THE GROUP (A): 27.1220 13.2069 33.8392 REMARK 3 T TENSOR REMARK 3 T11: 0.4805 T22: 0.2941 REMARK 3 T33: 0.3438 T12: 0.0123 REMARK 3 T13: 0.1497 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 2.9481 L22: 3.4008 REMARK 3 L33: 1.9422 L12: -0.6390 REMARK 3 L13: 0.8354 L23: -1.7724 REMARK 3 S TENSOR REMARK 3 S11: -0.0995 S12: -0.2738 S13: -0.1550 REMARK 3 S21: 0.5926 S22: -0.0940 S23: 0.2586 REMARK 3 S31: 0.5312 S32: 0.0092 S33: 0.1531 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 15:39) REMARK 3 ORIGIN FOR THE GROUP (A): 33.4806 15.8107 34.8431 REMARK 3 T TENSOR REMARK 3 T11: 0.3325 T22: 0.1528 REMARK 3 T33: 0.2756 T12: 0.0115 REMARK 3 T13: 0.0646 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 4.1437 L22: 2.1482 REMARK 3 L33: 4.0793 L12: -0.4703 REMARK 3 L13: 0.9020 L23: -0.1444 REMARK 3 S TENSOR REMARK 3 S11: -0.1152 S12: -0.3676 S13: -0.3915 REMARK 3 S21: 0.6981 S22: 0.1456 S23: 0.4344 REMARK 3 S31: -0.1340 S32: -0.0642 S33: -0.0520 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 40:59) REMARK 3 ORIGIN FOR THE GROUP (A): 31.0489 6.1649 23.4659 REMARK 3 T TENSOR REMARK 3 T11: 0.4330 T22: 0.2221 REMARK 3 T33: 0.4666 T12: 0.0336 REMARK 3 T13: 0.0211 T23: -0.0490 REMARK 3 L TENSOR REMARK 3 L11: 2.1433 L22: 9.6857 REMARK 3 L33: 6.8595 L12: -0.3762 REMARK 3 L13: 0.5928 L23: 0.5895 REMARK 3 S TENSOR REMARK 3 S11: -0.1234 S12: 0.2591 S13: -0.1098 REMARK 3 S21: -0.5190 S22: -0.2207 S23: 1.5048 REMARK 3 S31: 0.9182 S32: -0.3350 S33: 0.1946 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 60:84) REMARK 3 ORIGIN FOR THE GROUP (A): 33.3826 17.5967 26.9052 REMARK 3 T TENSOR REMARK 3 T11: 0.1989 T22: 0.1807 REMARK 3 T33: 0.2613 T12: -0.0026 REMARK 3 T13: 0.0454 T23: 0.0355 REMARK 3 L TENSOR REMARK 3 L11: 2.5710 L22: 4.4934 REMARK 3 L33: 8.5987 L12: 0.0408 REMARK 3 L13: 4.2023 L23: 1.0777 REMARK 3 S TENSOR REMARK 3 S11: -0.2375 S12: 0.0748 S13: 0.0614 REMARK 3 S21: 0.0318 S22: -0.0488 S23: 0.2459 REMARK 3 S31: -0.1618 S32: 0.2479 S33: 0.2026 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 85:103) REMARK 3 ORIGIN FOR THE GROUP (A): 25.5995 12.3016 25.5863 REMARK 3 T TENSOR REMARK 3 T11: 0.3586 T22: 0.1956 REMARK 3 T33: 0.2894 T12: -0.0874 REMARK 3 T13: 0.0265 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 3.8413 L22: 2.4194 REMARK 3 L33: 0.6042 L12: -1.9498 REMARK 3 L13: -0.4708 L23: 1.1672 REMARK 3 S TENSOR REMARK 3 S11: -0.2600 S12: 0.0198 S13: -0.3917 REMARK 3 S21: -0.1285 S22: 0.0846 S23: 0.2483 REMARK 3 S31: 0.3827 S32: -0.2657 S33: 0.1141 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 104:170) REMARK 3 ORIGIN FOR THE GROUP (A): 45.1932 25.5445 33.7945 REMARK 3 T TENSOR REMARK 3 T11: 0.2261 T22: 0.1988 REMARK 3 T33: 0.1659 T12: 0.0071 REMARK 3 T13: -0.0055 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 2.2111 L22: 2.2559 REMARK 3 L33: 1.7559 L12: 0.3618 REMARK 3 L13: -0.2897 L23: -0.8135 REMARK 3 S TENSOR REMARK 3 S11: 0.0042 S12: -0.1695 S13: 0.0050 REMARK 3 S21: 0.1226 S22: 0.0679 S23: -0.0482 REMARK 3 S31: 0.2429 S32: 0.0829 S33: -0.0523 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 171:188) REMARK 3 ORIGIN FOR THE GROUP (A): 45.6227 36.4757 23.6125 REMARK 3 T TENSOR REMARK 3 T11: 0.3188 T22: 0.2489 REMARK 3 T33: 0.3102 T12: -0.0511 REMARK 3 T13: 0.0016 T23: 0.0434 REMARK 3 L TENSOR REMARK 3 L11: 3.7715 L22: 2.9449 REMARK 3 L33: 8.0333 L12: 0.0250 REMARK 3 L13: 1.6544 L23: -0.9314 REMARK 3 S TENSOR REMARK 3 S11: -0.2506 S12: 0.3448 S13: 0.6247 REMARK 3 S21: -0.1351 S22: 0.2055 S23: -0.0049 REMARK 3 S31: -1.1711 S32: 0.0695 S33: 0.0741 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 189:210) REMARK 3 ORIGIN FOR THE GROUP (A): 56.3798 27.9439 27.1905 REMARK 3 T TENSOR REMARK 3 T11: 0.2378 T22: 0.2772 REMARK 3 T33: 0.2594 T12: 0.0122 REMARK 3 T13: 0.0352 T23: -0.0585 REMARK 3 L TENSOR REMARK 3 L11: 4.5731 L22: 4.4677 REMARK 3 L33: 5.4609 L12: 1.0971 REMARK 3 L13: 1.3453 L23: 0.4636 REMARK 3 S TENSOR REMARK 3 S11: -0.1802 S12: -0.0176 S13: 0.2982 REMARK 3 S21: -0.1177 S22: 0.1165 S23: -0.1656 REMARK 3 S31: -0.0095 S32: 0.3944 S33: 0.0023 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 211:238) REMARK 3 ORIGIN FOR THE GROUP (A): 56.1278 20.2120 23.6285 REMARK 3 T TENSOR REMARK 3 T11: 0.2780 T22: 0.2773 REMARK 3 T33: 0.2113 T12: 0.0347 REMARK 3 T13: 0.0159 T23: -0.0575 REMARK 3 L TENSOR REMARK 3 L11: 4.6997 L22: 6.0650 REMARK 3 L33: 8.3127 L12: 1.3364 REMARK 3 L13: -0.0146 L23: -0.6814 REMARK 3 S TENSOR REMARK 3 S11: -0.0818 S12: 0.4570 S13: -0.3375 REMARK 3 S21: -0.1796 S22: 0.2038 S23: -0.1927 REMARK 3 S31: 0.6284 S32: 0.1438 S33: -0.1250 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 3:26) REMARK 3 ORIGIN FOR THE GROUP (A): 22.4589 34.2743 29.6862 REMARK 3 T TENSOR REMARK 3 T11: 0.2193 T22: 0.1870 REMARK 3 T33: 0.2424 T12: -0.0031 REMARK 3 T13: -0.0184 T23: 0.0648 REMARK 3 L TENSOR REMARK 3 L11: 3.7621 L22: 2.2084 REMARK 3 L33: 4.9851 L12: 2.2791 REMARK 3 L13: 0.5485 L23: 4.4973 REMARK 3 S TENSOR REMARK 3 S11: 0.0203 S12: -0.1408 S13: -0.0132 REMARK 3 S21: -0.0422 S22: -0.1187 S23: -0.1705 REMARK 3 S31: 0.3206 S32: 0.0562 S33: 0.0770 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 27:68) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9959 41.5140 27.7455 REMARK 3 T TENSOR REMARK 3 T11: 0.1606 T22: 0.1814 REMARK 3 T33: 0.2268 T12: 0.0315 REMARK 3 T13: -0.0232 T23: -0.0227 REMARK 3 L TENSOR REMARK 3 L11: 4.3656 L22: 3.4852 REMARK 3 L33: 6.6433 L12: -0.2873 REMARK 3 L13: -2.8986 L23: -1.5588 REMARK 3 S TENSOR REMARK 3 S11: 0.2321 S12: -0.0921 S13: 0.3105 REMARK 3 S21: -0.0027 S22: -0.0247 S23: -0.2704 REMARK 3 S31: -0.1625 S32: 0.2636 S33: -0.1950 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 69:84) REMARK 3 ORIGIN FOR THE GROUP (A): 17.5990 31.0679 18.1658 REMARK 3 T TENSOR REMARK 3 T11: 0.3725 T22: 0.4384 REMARK 3 T33: 0.3446 T12: -0.1011 REMARK 3 T13: 0.0491 T23: -0.0812 REMARK 3 L TENSOR REMARK 3 L11: 5.6304 L22: 6.6597 REMARK 3 L33: 7.7459 L12: -0.9081 REMARK 3 L13: -1.2869 L23: -0.2179 REMARK 3 S TENSOR REMARK 3 S11: 0.0392 S12: 1.2055 S13: -0.4045 REMARK 3 S21: -1.1593 S22: 0.1602 S23: -0.5137 REMARK 3 S31: 0.6951 S32: -0.6175 S33: -0.2919 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 85:103) REMARK 3 ORIGIN FOR THE GROUP (A): 24.8047 37.2621 21.9815 REMARK 3 T TENSOR REMARK 3 T11: 0.2045 T22: 0.2329 REMARK 3 T33: 0.2808 T12: -0.0244 REMARK 3 T13: 0.0043 T23: 0.0314 REMARK 3 L TENSOR REMARK 3 L11: 2.9534 L22: 1.2620 REMARK 3 L33: 2.1631 L12: -1.7367 REMARK 3 L13: -0.7486 L23: 0.3990 REMARK 3 S TENSOR REMARK 3 S11: 0.0844 S12: -0.0184 S13: 0.2727 REMARK 3 S21: -0.0604 S22: 0.0911 S23: -0.3086 REMARK 3 S31: 0.0205 S32: 0.1499 S33: -0.1384 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 104:170) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7661 27.1493 33.3431 REMARK 3 T TENSOR REMARK 3 T11: 0.2313 T22: 0.2639 REMARK 3 T33: 0.2451 T12: -0.0791 REMARK 3 T13: 0.0062 T23: -0.0231 REMARK 3 L TENSOR REMARK 3 L11: 1.9976 L22: 4.0892 REMARK 3 L33: 2.6843 L12: 0.1371 REMARK 3 L13: -0.6697 L23: 0.5439 REMARK 3 S TENSOR REMARK 3 S11: -0.0963 S12: 0.1770 S13: -0.3756 REMARK 3 S21: 0.2460 S22: -0.0189 S23: 0.0599 REMARK 3 S31: 0.3743 S32: -0.4783 S33: 0.0963 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 171:203) REMARK 3 ORIGIN FOR THE GROUP (A): -0.5571 15.7542 27.1605 REMARK 3 T TENSOR REMARK 3 T11: 0.5633 T22: 0.7428 REMARK 3 T33: 0.7167 T12: -0.5441 REMARK 3 T13: 0.1766 T23: -0.2835 REMARK 3 L TENSOR REMARK 3 L11: 0.8772 L22: 1.0753 REMARK 3 L33: 4.1980 L12: -0.6424 REMARK 3 L13: -1.6082 L23: 1.8233 REMARK 3 S TENSOR REMARK 3 S11: -0.4100 S12: 0.3966 S13: -1.2506 REMARK 3 S21: 0.0120 S22: 0.0698 S23: 0.6523 REMARK 3 S31: 1.0383 S32: -1.4228 S33: 0.2997 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 204:239) REMARK 3 ORIGIN FOR THE GROUP (A): -5.8783 28.7673 22.3643 REMARK 3 T TENSOR REMARK 3 T11: 0.3723 T22: 1.0129 REMARK 3 T33: 0.3651 T12: -0.2438 REMARK 3 T13: -0.0280 T23: -0.1125 REMARK 3 L TENSOR REMARK 3 L11: 5.3803 L22: 1.7597 REMARK 3 L33: 1.1302 L12: 1.5851 REMARK 3 L13: 0.8984 L23: 0.0075 REMARK 3 S TENSOR REMARK 3 S11: -0.4495 S12: 1.0081 S13: -0.0236 REMARK 3 S21: -0.2411 S22: 0.1406 S23: 0.2118 REMARK 3 S31: 0.3665 S32: -1.5974 S33: 0.2335 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4EH1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-APR-12. REMARK 100 THE DEPOSITION ID IS D_1000071607. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97923 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29636 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.12000 REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.78600 REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BISTRIS PH 6.5, 2.0 M AMMONIUM REMARK 280 SULPHATE, CHYMOTRYPSIN (1:200), VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.53133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 75.06267 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 75.06267 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 37.53133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -83.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 93.32900 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 37.53133 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 239 REMARK 465 ALA A 240 REMARK 465 GLN A 241 REMARK 465 LEU A 242 REMARK 465 ALA A 243 REMARK 465 ALA A 244 REMARK 465 ARG B 2 REMARK 465 ALA B 240 REMARK 465 GLN B 241 REMARK 465 LEU B 242 REMARK 465 ALA B 243 REMARK 465 ALA B 244 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 75 103.52 -55.11 REMARK 500 ARG A 75 95.55 -42.61 REMARK 500 ASP B 28 48.04 -101.45 REMARK 500 LEU B 193 41.05 -104.83 REMARK 500 PHE B 236 46.62 -87.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 406 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP01484 RELATED DB: TARGETTRACK DBREF 4EH1 A 2 244 UNP Q9KMY3 HMP_VIBCH 152 394 DBREF 4EH1 B 2 244 UNP Q9KMY3 HMP_VIBCH 152 394 SEQRES 1 A 243 ARG ASP GLY ARG THR PHE VAL VAL ARG GLU LYS GLN VAL SEQRES 2 A 243 GLU SER ALA TYR VAL THR SER PHE VAL LEU VAL PRO ALA SEQRES 3 A 243 ASP GLY GLY ALA VAL LEU ASP TYR GLN PRO GLY GLN TYR SEQRES 4 A 243 ILE GLY ILE GLU VAL THR PRO GLU GLY SER ASP TYR ARG SEQRES 5 A 243 GLU ILE ARG GLN TYR SER LEU SER HIS ALA SER ASN GLY SEQRES 6 A 243 ARG GLU TYR ARG ILE SER VAL LYS ARG GLU GLY VAL GLY SEQRES 7 A 243 SER ASP ASN PRO GLY LEU VAL SER HIS TYR LEU HIS ASN SEQRES 8 A 243 ASN VAL LYS VAL GLY ASP SER VAL LYS LEU TYR ALA PRO SEQRES 9 A 243 ALA GLY ASP PHE PHE TYR VAL GLU ARG GLU ARG PRO VAL SEQRES 10 A 243 VAL LEU ILE SER ALA GLY VAL GLY ALA THR PRO MET GLN SEQRES 11 A 243 ALA ILE LEU HIS THR LEU ALA LYS GLN ASN LYS SER GLY SEQRES 12 A 243 VAL THR TYR LEU TYR ALA CYS ASN SER ALA LYS GLU HIS SEQRES 13 A 243 THR PHE ALA GLN GLU THR ALA GLN LEU ILE ALA GLN GLN SEQRES 14 A 243 GLY TRP MET GLN GLN VAL TRP TYR ARG ASP GLU SER ALA SEQRES 15 A 243 ASP ASP VAL LEU GLN GLY GLU MET GLN LEU ALA GLU LEU SEQRES 16 A 243 ILE LEU PRO ILE GLU ASP GLY ASP PHE TYR LEU CYS GLY SEQRES 17 A 243 PRO ILE GLY PHE MET GLN TYR VAL VAL LYS GLN LEU LEU SEQRES 18 A 243 ALA LEU GLY VAL ASP LYS ALA ARG ILE HIS TYR GLU VAL SEQRES 19 A 243 PHE GLY PRO HIS ALA GLN LEU ALA ALA SEQRES 1 B 243 ARG ASP GLY ARG THR PHE VAL VAL ARG GLU LYS GLN VAL SEQRES 2 B 243 GLU SER ALA TYR VAL THR SER PHE VAL LEU VAL PRO ALA SEQRES 3 B 243 ASP GLY GLY ALA VAL LEU ASP TYR GLN PRO GLY GLN TYR SEQRES 4 B 243 ILE GLY ILE GLU VAL THR PRO GLU GLY SER ASP TYR ARG SEQRES 5 B 243 GLU ILE ARG GLN TYR SER LEU SER HIS ALA SER ASN GLY SEQRES 6 B 243 ARG GLU TYR ARG ILE SER VAL LYS ARG GLU GLY VAL GLY SEQRES 7 B 243 SER ASP ASN PRO GLY LEU VAL SER HIS TYR LEU HIS ASN SEQRES 8 B 243 ASN VAL LYS VAL GLY ASP SER VAL LYS LEU TYR ALA PRO SEQRES 9 B 243 ALA GLY ASP PHE PHE TYR VAL GLU ARG GLU ARG PRO VAL SEQRES 10 B 243 VAL LEU ILE SER ALA GLY VAL GLY ALA THR PRO MET GLN SEQRES 11 B 243 ALA ILE LEU HIS THR LEU ALA LYS GLN ASN LYS SER GLY SEQRES 12 B 243 VAL THR TYR LEU TYR ALA CYS ASN SER ALA LYS GLU HIS SEQRES 13 B 243 THR PHE ALA GLN GLU THR ALA GLN LEU ILE ALA GLN GLN SEQRES 14 B 243 GLY TRP MET GLN GLN VAL TRP TYR ARG ASP GLU SER ALA SEQRES 15 B 243 ASP ASP VAL LEU GLN GLY GLU MET GLN LEU ALA GLU LEU SEQRES 16 B 243 ILE LEU PRO ILE GLU ASP GLY ASP PHE TYR LEU CYS GLY SEQRES 17 B 243 PRO ILE GLY PHE MET GLN TYR VAL VAL LYS GLN LEU LEU SEQRES 18 B 243 ALA LEU GLY VAL ASP LYS ALA ARG ILE HIS TYR GLU VAL SEQRES 19 B 243 PHE GLY PRO HIS ALA GLN LEU ALA ALA HET FAD A 301 53 HET CL A 302 1 HET SO4 A 303 5 HET SO4 A 304 5 HET CL A 305 1 HET GOL A 306 6 HET CL A 307 1 HET GOL A 308 6 HET GOL B 401 6 HET FAD B 402 53 HET GOL B 403 6 HET GOL B 404 6 HET CL B 405 1 HET CL B 406 1 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 FAD 2(C27 H33 N9 O15 P2) FORMUL 4 CL 5(CL 1-) FORMUL 5 SO4 2(O4 S 2-) FORMUL 8 GOL 5(C3 H8 O3) FORMUL 17 HOH *212(H2 O) HELIX 1 1 GLY A 84 VAL A 94 1 11 HELIX 2 2 GLY A 126 GLN A 140 1 15 HELIX 3 3 SER A 153 HIS A 157 5 5 HELIX 4 4 PHE A 159 GLY A 171 1 13 HELIX 5 5 PRO A 210 GLY A 225 1 16 HELIX 6 6 ASP A 227 ALA A 229 5 3 HELIX 7 7 GLY B 84 VAL B 94 1 11 HELIX 8 8 GLY B 126 ASN B 141 1 16 HELIX 9 9 SER B 153 HIS B 157 5 5 HELIX 10 10 PHE B 159 GLY B 171 1 13 HELIX 11 11 PRO B 210 GLY B 225 1 16 HELIX 12 12 ASP B 227 ALA B 229 5 3 SHEET 1 A 6 GLU A 54 SER A 59 0 SHEET 2 A 6 TYR A 40 VAL A 45 -1 N ILE A 43 O ARG A 56 SHEET 3 A 6 SER A 99 ALA A 106 -1 O LYS A 101 N GLU A 44 SHEET 4 A 6 ARG A 5 VAL A 14 -1 N ARG A 5 O LEU A 102 SHEET 5 A 6 VAL A 19 PRO A 26 -1 O VAL A 23 N ARG A 10 SHEET 6 A 6 TYR A 69 LYS A 74 -1 O TYR A 69 N LEU A 24 SHEET 1 B 6 LEU A 187 GLN A 188 0 SHEET 2 B 6 MET A 173 TYR A 178 1 N VAL A 176 O LEU A 187 SHEET 3 B 6 VAL A 145 CYS A 151 1 N TYR A 147 O MET A 173 SHEET 4 B 6 VAL A 118 ALA A 123 1 N LEU A 120 O LEU A 148 SHEET 5 B 6 ASP A 204 GLY A 209 1 O TYR A 206 N VAL A 119 SHEET 6 B 6 ILE A 231 VAL A 235 1 O HIS A 232 N PHE A 205 SHEET 1 C 6 GLU B 54 SER B 59 0 SHEET 2 C 6 TYR B 40 VAL B 45 -1 N ILE B 43 O ARG B 56 SHEET 3 C 6 SER B 99 ALA B 106 -1 O LYS B 101 N GLU B 44 SHEET 4 C 6 THR B 6 VAL B 14 -1 N PHE B 7 O VAL B 100 SHEET 5 C 6 VAL B 19 PRO B 26 -1 O VAL B 23 N ARG B 10 SHEET 6 C 6 TYR B 69 LYS B 74 -1 O VAL B 73 N THR B 20 SHEET 1 D 6 VAL B 186 GLN B 188 0 SHEET 2 D 6 MET B 173 TYR B 178 1 N TYR B 178 O LEU B 187 SHEET 3 D 6 VAL B 145 CYS B 151 1 N TYR B 149 O GLN B 175 SHEET 4 D 6 VAL B 118 ALA B 123 1 N LEU B 120 O LEU B 148 SHEET 5 D 6 ASP B 204 CYS B 208 1 O TYR B 206 N VAL B 119 SHEET 6 D 6 ILE B 231 GLU B 234 1 O HIS B 232 N LEU B 207 CISPEP 1 GLY A 237 PRO A 238 0 1.88 SITE 1 AC1 26 TYR A 40 ARG A 56 GLN A 57 TYR A 58 SITE 2 AC1 26 SER A 59 SER A 72 VAL A 73 LYS A 74 SITE 3 AC1 26 GLU A 76 ASN A 82 GLY A 84 LEU A 85 SITE 4 AC1 26 VAL A 86 SER A 87 THR A 128 GLU A 234 SITE 5 AC1 26 PHE A 236 HOH A 422 HOH A 436 HOH A 457 SITE 6 AC1 26 HOH A 467 ASP B 3 ARG B 5 ARG B 53 SITE 7 AC1 26 TYR B 103 HOH B 538 SITE 1 AC2 2 ASP A 98 SER A 99 SITE 1 AC3 5 ARG A 2 GLY A 4 LEU A 102 TYR A 103 SITE 2 AC3 5 ALA A 104 SITE 1 AC4 3 ASP A 108 PHE A 109 TYR A 233 SITE 1 AC5 2 ARG A 114 HOH A 491 SITE 1 AC6 2 LYS A 142 SER A 143 SITE 1 AC7 1 ASN A 152 SITE 1 AC8 4 TYR A 89 ASN A 93 HOH A 462 HOH A 504 SITE 1 AC9 6 GLU B 48 TYR B 89 ASN B 93 HOH B 516 SITE 2 AC9 6 HOH B 535 HOH B 596 SITE 1 BC1 22 TYR B 40 ARG B 56 GLN B 57 TYR B 58 SITE 2 BC1 22 SER B 59 SER B 72 VAL B 73 LYS B 74 SITE 3 BC1 22 GLU B 76 GLY B 84 LEU B 85 VAL B 86 SITE 4 BC1 22 SER B 87 VAL B 125 THR B 128 PHE B 236 SITE 5 BC1 22 HIS B 239 HOH B 511 HOH B 523 HOH B 564 SITE 6 BC1 22 HOH B 565 HOH B 572 SITE 1 BC2 8 ALA A 168 ASP B 108 PHE B 109 PHE B 110 SITE 2 BC2 8 VAL B 112 ARG B 114 TYR B 206 HIS B 232 SITE 1 BC3 7 PRO A 238 TYR B 40 ILE B 41 GLY B 42 SITE 2 BC3 7 GLN B 57 ALA B 104 ALA B 106 SITE 1 BC4 2 LYS B 74 VAL B 125 CRYST1 93.329 93.329 112.594 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010715 0.006186 0.000000 0.00000 SCALE2 0.000000 0.012372 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008881 0.00000